Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_016757695.1	Lacticaseibacillus paracasei subsp. tolerans	S-NB	SAMN17359333	2017-12	China: Xinjiang	-	0	0	0	1	1.00
2	GCA_002148805.1	Lacticaseibacillus paracasei	DPC4206	SAMN06220137	1995-07	Ireland	-	2	0	0	2	2.00
3	GCA_002148885.1	Lacticaseibacillus paracasei	DPC4536	SAMN06463780	1995-11	Ireland	-	2	0	0	2	2.00
4	GCA_016757675.1	Lacticaseibacillus paracasei subsp. tolerans	S-NA5	SAMN17359331	2017-12	China: Xinjiang	-	2	0	0	1	1.00
5	GCA_024498315.1	Lacticaseibacillus paracasei	SMN-LBK	SAMN29933592	2016-11-21	China: Xinjiang	-	2	0	0	1	1.00
6	GCA_024622515.1	Lacticaseibacillus paracasei	DSM 28675	SAMN29593134	2012	Germany: Freising	Mus musculus	2	0	0	2	2.00
7	GCA_028320385.1	Lacticaseibacillus paracasei	1001270st1_F8_1001270H_150608	SAMN31322638	2015-06-08	USA	Homo sapiens	2	0	0	2	2.00
8	GCA_035586595.1	Lacticaseibacillus paracasei	HP-B1337	SAMN38922877	2023-12-15	China	-	2	0	0	1	1.00
9	GCA_036281375.1	Lacticaseibacillus paracasei	CUL07A	SAMN09708453	-	-	-	2	0	0	2	2.00
10	GCA_040785095.1	Lacticaseibacillus paracasei	gbc_f	SAMN41082101	2021	USA: Glendale, Arizona	-	2	0	0	2	2.00
11	GCA_045808845.1	Lacticaseibacillus paracasei	MSR2	SAMN45146297	2024	Bangladesh	-	2	0	0	2	2.00
12	GCA_049191845.1	Lacticaseibacillus paracasei	IATA110	SAMN45053973	2022	Spain:Valencia	Homo sapiens	2	0	0	2	2.00
13	GCA_049205075.1	Lacticaseibacillus paracasei	IATA109	SAMN45053972	2022	Spain:Valencia	Homo sapiens	2	0	0	2	2.00
14	GCA_003434205.1	Lacticaseibacillus paracasei	AM33-2AC	SAMN09736452	2013-12-01	China: Shenzhen	Homo sapiens	3	0	0	2	2.00
15	GCA_041283745.2	Lacticaseibacillus paracasei	ORD 0998	SAMN43000418	2016-01	Spain: Sevilla	Homo sapiens	3	0	0	1	1.00
16	GCA_000309785.1	Lacticaseibacillus paracasei	Lpc-37	SAMN02472013	-	-	-	4	0	0	2	2.00
17	GCA_048282615.1	Lacticaseibacillus paracasei	439	SAMN46889214	2023-12-12	China	-	4	0	0	1	1.00
18	GCA_000410235.1	Lacticaseibacillus paracasei subsp. paracasei Lpp74	Lpp74	SAMN02469728	2000	-	-	25	0	0	2	2.00
19	GCA_026797475.1	Lacticaseibacillus paracasei	CBP-1042	SAMN27675067	-	-	-	134	0	0	2	2.00
20	GCA_025190725.1	Lacticaseibacillus paracasei	CIRM-BIA 699	SAMN10365439	1972	-	-	136	0	0	2	2.00
21	GCA_028878305.1	Lacticaseibacillus paracasei	NRRL B-456	SAMN23708197	2012-01-30	Italy	-	136	0	0	2	2.00
22	GCA_037283385.1	Lacticaseibacillus paracasei	NRC_P4	SAMN32629231	2020-03	Egypt:Giza	cow	137	0	0	2	2.00
23	GCA_003712565.1	Lacticaseibacillus paracasei	FAM19317	SAMN04088878	1990	Switzerland	-	138	0	0	2	2.00
24	GCA_016887785.1	Lacticaseibacillus paracasei	2306	SAMN17562096	2011-06-09	Italy	-	140	0	0	2	2.00
25	GCA_003712985.1	Lacticaseibacillus paracasei	FAM8140	SAMN04088895	-	Switzerland	-	142	0	0	2	2.00
26	GCA_030710015.1	Lacticaseibacillus paracasei	ULE721	SAMN33593465	2018-01-15	Spain:Leon	-	161	0	0	2	2.00
27	GCA_000410195.1	Lacticaseibacillus paracasei subsp. paracasei Lpp219	Lpp219	SAMN02469710	2008	-	Homo sapiens	179	0	0	2	2.00
28	GCA_000309665.1	Lacticaseibacillus paracasei	M36	SAMN02472000	-	USA: Wisconsin	-	181	0	0	2	2.00
29	GCA_025190525.1	Lacticaseibacillus paracasei	CIRM-BIA 1517	SAMN10365450	2012	France	-	186	0	0	2	2.00
30	GCA_049201625.1	Lacticaseibacillus paracasei	UBLPc-87	SAMN47217620	2018-05-05	India: Hyderabad	-	186	0	0	2	2.00
31	GCA_025190565.1	Lacticaseibacillus paracasei	CIRM-BIA 2128	SAMN10365446	1993	-	-	228	0	0	2	2.00
32	GCA_037414215.1	Lacticaseibacillus paracasei	LPC100	SAMN39212581	1998	Italy: Universit Cattolica di Piacenza	Homo sapiens	228	0	0	1	1.00
33	GCA_003712965.1	Lacticaseibacillus paracasei	FAM6410	SAMN04088893	-	Switzerland	-	234	0	0	2	2.00
34	GCA_000410055.1	Lacticaseibacillus paracasei subsp. paracasei Lpp227	Lpp227	SAMN02641494	2008	-	Homo sapiens	240	0	0	2	2.00
35	GCA_003712245.1	Lacticaseibacillus paracasei	FAM18108	SAMN04088862	2003	Switzerland	-	240	0	0	2	2.00
36	GCA_004141835.1	Lacticaseibacillus paracasei	SRCM103299	SAMN10849469	2018	South Korea	-	264	0	0	1	1.00
37	GCA_026967245.1	Lacticaseibacillus paracasei	Lpc_yogurt_B6	SAMN32062179	2021-07-27	USA:Chicago	-	264	0	0	2	2.00
38	GCA_041117985.1	Lacticaseibacillus paracasei	MYA5	SAMN42930119	2022-10-21	South Korea: Gwangju	-	264	0	0	1	1.00
39	GCA_041679805.1	Lacticaseibacillus paracasei	APY	SAMN41163063	2021	Germany	Homo sapiens	265	0	0	2	2.00
40	GCA_009996805.1	Lacticaseibacillus paracasei	D3-5	SAMN13905290	2018-01-10	USA	Homo sapiens	266	0	0	2	2.00
41	GCA_026967195.1	Lacticaseibacillus paracasei	Lpc_yogurt_B5	SAMN32062178	2021-07-27	USA:Chicago	-	267	0	0	2	2.00
42	GCA_026967205.1	Lacticaseibacillus paracasei	Lpc_yogurt_B4	SAMN32062177	2021-07-27	USA:Chicago	-	267	0	0	2	2.00
43	GCA_026967275.1	Lacticaseibacillus paracasei	Lpc_yogurt_B3	SAMN32062176	2021-07-27	USA:Chicago	-	267	0	0	2	2.00
44	GCA_026967295.1	Lacticaseibacillus paracasei	Lpc_yogurt_B2	SAMN32062175	2021-07-27	USA:Chicago	-	267	0	0	2	2.00
45	GCA_015693945.1	Lacticaseibacillus paracasei subsp. tolerans	ZY-1	SAMN16861159	2017-06	China	-	271	0	0	1	1.00
46	GCA_019990865.1	Lacticaseibacillus paracasei	cek-R2	SAMN21367938	2021-03-23	Hungary: Dinnyes	beet	311	0	0	2	2.00
47	GCA_016890245.1	Lacticaseibacillus paracasei	YT170	SAMN17818118	2020-10-11	China: Chengdu	Rex rabbit	314	0	0	2	2.00
48	GCA_042015765.1	Lacticaseibacillus paracasei	ZJUZ2-3	SAMN43503360	2024-02-04	China: Hangzhou	Homo sapiens	314	0	0	1	1.00
49	GCA_000410015.1	Lacticaseibacillus paracasei subsp. paracasei Lpp221	Lpp221	SAMN02469717	2008	-	Homo sapiens	319	0	0	2	2.00
50	GCA_008369945.1	Lacticaseibacillus paracasei	DTA93	SAMN12661681	2016-10-22	Brazil	Homo sapiens	322	0	0	2	2.00
51	GCA_015476175.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0747	SAMN16668663	-	South Korea	-	323	0	0	1	1.00
52	GCA_015476195.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0761	SAMN16668817	-	South Korea	-	324	0	0	1	1.00
53	GCA_002904305.1	Lacticaseibacillus paracasei	CCC B1205	SAMN03813856	-	USA	-	328	0	0	2	2.00
54	GCA_025757505.1	Lacticaseibacillus paracasei	NG-LCU-ST2	SAMN31037893	2022-03-03	Nigeria: Ibadan, Oyo State	Maize	329	0	0	1	1.00
55	GCA_017638905.1	Lacticaseibacillus paracasei	HL182	SAMN18236778	2005	South Korea	Homo sapiens	330	0	0	1	1.00
56	GCA_013307125.1	Lacticaseibacillus paracasei	Lp02	SAMN11489091	2018-06-15	South Korea:Kyunggi-do	Homo sapiens	331	0	0	2	2.00
57	GCA_009931715.1	Lacticaseibacillus paracasei	CACC 566	SAMN13871807	2018-10	South Korea:Jeongeup-si	Canine	334	0	0	1	1.00
58	GCA_012955485.1	Lacticaseibacillus paracasei	347-16	SAMN13259076	2016	Russia: Kislovodsk	Homo sapiens	334	0	0	1	1.00
59	GCA_028322945.1	Lacticaseibacillus paracasei	1001295st1_G5_1001295H_181012	SAMN31322639	2018-10-12	USA	Homo sapiens	334	0	0	2	2.00
60	GCA_029906365.1	Lacticaseibacillus paracasei subsp. paracasei	MI3	SAMN34106059	2022-09-01	South Korea	Homo sapiens	334	0	0	1	1.00
61	GCA_024637915.1	Lacticaseibacillus paracasei	VHProbi F11	SAMN27160580	2021-01-25	China:Qingdao	Homo sapiens	335	0	0	1	1.00
62	GCA_034044075.1	Lacticaseibacillus paracasei	MP11A	SAMN37950489	2019-08-19	India: Manipur	-	335	0	0	1	1.00
63	GCA_037283365.1	Lacticaseibacillus paracasei	NRC_P5	SAMN32629232	2020-03	Egypt:Qalyubia	buffalo	335	0	0	2	2.00
64	GCA_037283435.1	Lacticaseibacillus paracasei	NRC_P6	SAMN32629233	2020-03	Egypt:Giza	buffalo	335	0	0	2	2.00
65	GCA_037283545.1	Lacticaseibacillus paracasei	NRC_P3	SAMN32629230	2020-03	Egypt:Sohag	cow	335	0	0	2	2.00
66	GCA_001244395.1	Lacticaseibacillus paracasei	L9	SAMN03853751	2006-10-30	China: village Bama, guangxi	Homo sapiens	336	0	0	1	1.00
67	GCA_003966835.1	Lacticaseibacillus paracasei	-	SAMD00094822	-	-	-	336	0	0	1	1.00
68	GCA_026013725.1	Lacticaseibacillus paracasei	ATG-E1	SAMN31433209	2016-01-07	South Korea: Deajeon	Hono sapiens	340	0	0	1	1.00
69	GCA_008329845.1	Lacticaseibacillus paracasei	10266	SAMN09874024	2017-06-28	China	Homo sapiens	342	0	0	1	1.00
70	GCA_030480425.1	Lacticaseibacillus paracasei	L14	SAMN33263285	2009-12-01	China: Shanghai	-	344	0	0	1	1.00
71	GCA_000410455.1	Lacticaseibacillus paracasei subsp. paracasei Lpp43	Lpp43	SAMN02469725	1995	-	-	346	0	0	2	2.00
72	GCA_028878105.1	Lacticaseibacillus paracasei	TMW 1.300	SAMN23708206	2012-01-30	Italy	-	351	0	0	2	2.00
73	GCA_003640765.1	Lacticaseibacillus paracasei	UBLPC-35	SAMN10147909	2008-09-26	India:Hyderabad	-	352	0	0	0	0.00
74	GCA_029625355.1	Lacticaseibacillus paracasei	VHProbi OF10	SAMN26144441	2021-01-25	China:Qingdao	-	357	0	0	1	1.00
75	GCA_007637635.1	Lacticaseibacillus paracasei	NJ	SAMN12319598	2013-06-12	China:Hubei	-	359	0	0	1	1.00
76	GCA_036430865.1	Lacticaseibacillus paracasei	FI11579	SAMN33193087	2018-01	Ghana:Tamale	-	366	0	0	2	2.00
77	GCA_046939035.1	Lacticaseibacillus paracasei subsp. paracasei	M587A	SAMN35847929	2019	Czech Republic	wild boar	389	0	0	2	2.00
78	GCA_000410075.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-4648	CNCM I-4648	SAMN03177793	1988	-	-	396	0	0	2	2.00
79	GCA_036431975.1	Lacticaseibacillus paracasei	CMAN-Suc	SAMN35624267	2018-01	Ghana	-	404	0	0	2	2.00
80	GCA_032229185.1	Lacticaseibacillus paracasei	NC4	SAMN37472141	2023-01-25	Viet Nam: Ha Giang	-	424	0	0	1	1.00
81	GCA_000309685.1	Lacticaseibacillus paracasei	T71499	SAMN02472001	-	Finland	Homo sapiens	433	0	0	2	2.00
82	GCA_036432035.1	Lacticaseibacillus paracasei	LMAN-Kh	SAMN35624263	2018-01	Ghana	-	435	0	0	2	2.00
83	GCA_025252385.1	Lacticaseibacillus paracasei	VHProbi O44	SAMN30550144	2021-05-10	China: Qingdao	Homo sapiens	436	0	0	1	1.00
84	GCA_036762895.1	Lacticaseibacillus paracasei	1311_IL3157	SAMN37904766	-	-	animal	436	0	0	2	2.00
85	GCA_030360845.1	Lacticaseibacillus paracasei	TOM.1339	SAMN35776905	2022-11	Russia: Altai	-	437	0	0	2	2.00
86	GCA_002079285.1	Lacticaseibacillus paracasei	IIA	SAMN04571918	2014-05-05	Indonesia: Bogor	-	439	0	0	1	1.00
87	GCA_044990665.1	Lacticaseibacillus paracasei	FNCPS K7	SAMN44657157	1987-08-12	Russia: Kislovodsk	-	452	0	0	2	2.00
88	GCA_002257625.1	Lacticaseibacillus paracasei	TK1501	SAMN05921089	2015	China:Inner Mongolia	-	453	0	0	1	1.00
89	GCA_028609725.1	Lacticaseibacillus paracasei	CLP-C10	SAMN14677579	2018-12	China	-	466	0	0	1	1.00
90	GCA_003712785.1	Lacticaseibacillus paracasei	FAM6161	SAMN04088891	-	Switzerland	-	470	0	0	2	2.00
91	GCA_000410435.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-4649	CNCM I-4649	SAMN02469704	2003	-	-	472	0	0	2	2.00
92	GCA_003713005.1	Lacticaseibacillus paracasei	FAM7821	SAMN04088894	-	Switzerland	-	472	0	0	2	2.00
93	GCA_030361365.1	Lacticaseibacillus paracasei	TOM.9	SAMN35776875	2022-04	Russia: North Ossetia	-	475	0	0	2	2.00
94	GCA_001895185.1	Lacticaseibacillus paracasei	-	SAMD00029052	-	-	-	477	0	0	2	2.00
95	GCA_012932835.1	Lacticaseibacillus paracasei	CRF28	SAMN05660651	-	USA	-	477	0	0	2	2.00
96	GCA_018596415.1	Lacticaseibacillus paracasei subsp. paracasei	BD5115	SAMN19113555	2019-04-11	China	Homo sapiens	483	0	0	0	0.00
97	GCA_012932815.1	Lacticaseibacillus paracasei	UW1	SAMN05660434	-	USA: Wisconsin	-	486	0	0	2	2.00
98	GCA_000309645.1	Lacticaseibacillus paracasei	CRF28	SAMN02472005	-	USA	Homo sapiens	489	0	0	2	2.00
99	GCA_004078565.1	Lacticaseibacillus paracasei	SRCM103424	SAMN10743383	2018	South Korea	-	489	0	0	1	1.00
100	GCA_015319235.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0543	SAMN16657553	-	South Korea	-	495	0	0	1	1.00