GCA_017581005.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIGDIDEAH_11 (original name was: gnl|Prokka|IGDIDEAH_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	terpene	26,257	47,138

gnlProkkaIGDIDEAH_29 (original name was: gnl|Prokka|IGDIDEAH_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	T3PKS	128,085	169,254

gnlProkkaIGDIDEAH_33 (original name was: gnl|Prokka|IGDIDEAH_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	cyclic-lactone-autoinducer	23,321	44,026

gnlProkkaIGDIDEAH_35 (original name was: gnl|Prokka|IGDIDEAH_35)

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	RiPP-like	20,178	32,328

Region	Type	From	To	Similarity
Region 11.1	terpene	26,257	47,138
Region 23.1	T3PKS	128,085	169,254
Region 27.1	cyclic-lactone-autoinducer	23,321	44,026
Region 29.1	RiPP-like	20,178	32,328

No secondary metabolite regions were found in these records:: gnlProkkaIGDIDEAH_1 (original name was: gnl|Prokka|IGDIDEAH_1); gnlProkkaIGDIDEAH_2 (original name was: gnl|Prokka|IGDIDEAH_2); gnlProkkaIGDIDEAH_3 (original name was: gnl|Prokka|IGDIDEAH_3); gnlProkkaIGDIDEAH_4 (original name was: gnl|Prokka|IGDIDEAH_4); gnlProkkaIGDIDEAH_5 (original name was: gnl|Prokka|IGDIDEAH_5); gnlProkkaIGDIDEAH_6 (original name was: gnl|Prokka|IGDIDEAH_6); gnlProkkaIGDIDEAH_7 (original name was: gnl|Prokka|IGDIDEAH_7); gnlProkkaIGDIDEAH_8 (original name was: gnl|Prokka|IGDIDEAH_8); gnlProkkaIGDIDEAH_9 (original name was: gnl|Prokka|IGDIDEAH_9); gnlProkkaIGDIDEAH_10 (original name was: gnl|Prokka|IGDIDEAH_10); gnlProkkaIGDIDEAH_12 (original name was: gnl|Prokka|IGDIDEAH_12); gnlProkkaIGDIDEAH_13 (original name was: gnl|Prokka|IGDIDEAH_13); gnlProkkaIGDIDEAH_14 (original name was: gnl|Prokka|IGDIDEAH_14); gnlProkkaIGDIDEAH_15 (original name was: gnl|Prokka|IGDIDEAH_15); gnlProkkaIGDIDEAH_16 (original name was: gnl|Prokka|IGDIDEAH_16); gnlProkkaIGDIDEAH_17 (original name was: gnl|Prokka|IGDIDEAH_17); gnlProkkaIGDIDEAH_18 (original name was: gnl|Prokka|IGDIDEAH_18); gnlProkkaIGDIDEAH_19 (original name was: gnl|Prokka|IGDIDEAH_19); gnlProkkaIGDIDEAH_20 (original name was: gnl|Prokka|IGDIDEAH_20); gnlProkkaIGDIDEAH_21 (original name was: gnl|Prokka|IGDIDEAH_21); gnlProkkaIGDIDEAH_22 (original name was: gnl|Prokka|IGDIDEAH_22); gnlProkkaIGDIDEAH_30 (original name was: gnl|Prokka|IGDIDEAH_30); gnlProkkaIGDIDEAH_31 (original name was: gnl|Prokka|IGDIDEAH_31); gnlProkkaIGDIDEAH_32 (original name was: gnl|Prokka|IGDIDEAH_32); gnlProkkaIGDIDEAH_34 (original name was: gnl|Prokka|IGDIDEAH_34)

Compact view

gnlProkkaIGDIDEAH_11 - Region 1 - terpene

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Location: 26,257 - 47,138 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIGDIDEAH_29 - Region 1 - T3PKS

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Location: 128,085 - 169,254 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIGDIDEAH_33 - Region 1 - cyclic-lactone-autoinducer

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Location: 23,321 - 44,026 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIGDIDEAH_35 - Region 1 - RiPP-like

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Location: 20,178 - 32,328 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.