GCA_017851025.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLLILHNAC_11 (original name was: gnl|Prokka|LLILHNAC_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	1	16,605
Region 11.2	RRE-containing	19,241	39,498

gnlProkkaLLILHNAC_23 (original name was: gnl|Prokka|LLILHNAC_23)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	ranthipeptide	11,378	32,997

Region	Type	From	To	Similarity
Region 11.1	RRE-containing	1	16,605
Region 11.2	RRE-containing	19,241	39,498
Region 23.1	ranthipeptide	11,378	32,997

No secondary metabolite regions were found in these records:: gnlProkkaLLILHNAC_1 (original name was: gnl|Prokka|LLILHNAC_1); gnlProkkaLLILHNAC_2 (original name was: gnl|Prokka|LLILHNAC_2); gnlProkkaLLILHNAC_3 (original name was: gnl|Prokka|LLILHNAC_3); gnlProkkaLLILHNAC_4 (original name was: gnl|Prokka|LLILHNAC_4); gnlProkkaLLILHNAC_5 (original name was: gnl|Prokka|LLILHNAC_5); gnlProkkaLLILHNAC_6 (original name was: gnl|Prokka|LLILHNAC_6); gnlProkkaLLILHNAC_7 (original name was: gnl|Prokka|LLILHNAC_7); gnlProkkaLLILHNAC_8 (original name was: gnl|Prokka|LLILHNAC_8); gnlProkkaLLILHNAC_9 (original name was: gnl|Prokka|LLILHNAC_9); gnlProkkaLLILHNAC_10 (original name was: gnl|Prokka|LLILHNAC_10); gnlProkkaLLILHNAC_12 (original name was: gnl|Prokka|LLILHNAC_12); gnlProkkaLLILHNAC_13 (original name was: gnl|Prokka|LLILHNAC_13); gnlProkkaLLILHNAC_14 (original name was: gnl|Prokka|LLILHNAC_14); gnlProkkaLLILHNAC_15 (original name was: gnl|Prokka|LLILHNAC_15); gnlProkkaLLILHNAC_16 (original name was: gnl|Prokka|LLILHNAC_16); gnlProkkaLLILHNAC_17 (original name was: gnl|Prokka|LLILHNAC_17); gnlProkkaLLILHNAC_18 (original name was: gnl|Prokka|LLILHNAC_18); gnlProkkaLLILHNAC_19 (original name was: gnl|Prokka|LLILHNAC_19); gnlProkkaLLILHNAC_20 (original name was: gnl|Prokka|LLILHNAC_20); gnlProkkaLLILHNAC_21 (original name was: gnl|Prokka|LLILHNAC_21); gnlProkkaLLILHNAC_22 (original name was: gnl|Prokka|LLILHNAC_22); gnlProkkaLLILHNAC_24 (original name was: gnl|Prokka|LLILHNAC_24); gnlProkkaLLILHNAC_25 (original name was: gnl|Prokka|LLILHNAC_25); gnlProkkaLLILHNAC_26 (original name was: gnl|Prokka|LLILHNAC_26); gnlProkkaLLILHNAC_27 (original name was: gnl|Prokka|LLILHNAC_27); gnlProkkaLLILHNAC_28 (original name was: gnl|Prokka|LLILHNAC_28); gnlProkkaLLILHNAC_29 (original name was: gnl|Prokka|LLILHNAC_29); gnlProkkaLLILHNAC_30 (original name was: gnl|Prokka|LLILHNAC_30); gnlProkkaLLILHNAC_31 (original name was: gnl|Prokka|LLILHNAC_31); gnlProkkaLLILHNAC_32 (original name was: gnl|Prokka|LLILHNAC_32); gnlProkkaLLILHNAC_33 (original name was: gnl|Prokka|LLILHNAC_33); gnlProkkaLLILHNAC_34 (original name was: gnl|Prokka|LLILHNAC_34); gnlProkkaLLILHNAC_35 (original name was: gnl|Prokka|LLILHNAC_35); gnlProkkaLLILHNAC_36 (original name was: gnl|Prokka|LLILHNAC_36); gnlProkkaLLILHNAC_37 (original name was: gnl|Prokka|LLILHNAC_37); gnlProkkaLLILHNAC_38 (original name was: gnl|Prokka|LLILHNAC_38); gnlProkkaLLILHNAC_39 (original name was: gnl|Prokka|LLILHNAC_39); gnlProkkaLLILHNAC_40 (original name was: gnl|Prokka|LLILHNAC_40); gnlProkkaLLILHNAC_41 (original name was: gnl|Prokka|LLILHNAC_41); gnlProkkaLLILHNAC_42 (original name was: gnl|Prokka|LLILHNAC_42); gnlProkkaLLILHNAC_43 (original name was: gnl|Prokka|LLILHNAC_43); gnlProkkaLLILHNAC_44 (original name was: gnl|Prokka|LLILHNAC_44); gnlProkkaLLILHNAC_45 (original name was: gnl|Prokka|LLILHNAC_45); gnlProkkaLLILHNAC_46 (original name was: gnl|Prokka|LLILHNAC_46); gnlProkkaLLILHNAC_47 (original name was: gnl|Prokka|LLILHNAC_47); gnlProkkaLLILHNAC_48 (original name was: gnl|Prokka|LLILHNAC_48); gnlProkkaLLILHNAC_49 (original name was: gnl|Prokka|LLILHNAC_49); gnlProkkaLLILHNAC_50 (original name was: gnl|Prokka|LLILHNAC_50); gnlProkkaLLILHNAC_51 (original name was: gnl|Prokka|LLILHNAC_51); gnlProkkaLLILHNAC_52 (original name was: gnl|Prokka|LLILHNAC_52); gnlProkkaLLILHNAC_53 (original name was: gnl|Prokka|LLILHNAC_53); gnlProkkaLLILHNAC_54 (original name was: gnl|Prokka|LLILHNAC_54); gnlProkkaLLILHNAC_55 (original name was: gnl|Prokka|LLILHNAC_55); gnlProkkaLLILHNAC_56 (original name was: gnl|Prokka|LLILHNAC_56); gnlProkkaLLILHNAC_57 (original name was: gnl|Prokka|LLILHNAC_57); gnlProkkaLLILHNAC_58 (original name was: gnl|Prokka|LLILHNAC_58); gnlProkkaLLILHNAC_59 (original name was: gnl|Prokka|LLILHNAC_59); gnlProkkaLLILHNAC_60 (original name was: gnl|Prokka|LLILHNAC_60); gnlProkkaLLILHNAC_61 (original name was: gnl|Prokka|LLILHNAC_61); gnlProkkaLLILHNAC_62 (original name was: gnl|Prokka|LLILHNAC_62); gnlProkkaLLILHNAC_63 (original name was: gnl|Prokka|LLILHNAC_63); gnlProkkaLLILHNAC_64 (original name was: gnl|Prokka|LLILHNAC_64); gnlProkkaLLILHNAC_65 (original name was: gnl|Prokka|LLILHNAC_65); gnlProkkaLLILHNAC_66 (original name was: gnl|Prokka|LLILHNAC_66); gnlProkkaLLILHNAC_67 (original name was: gnl|Prokka|LLILHNAC_67); gnlProkkaLLILHNAC_68 (original name was: gnl|Prokka|LLILHNAC_68); gnlProkkaLLILHNAC_69 (original name was: gnl|Prokka|LLILHNAC_69); gnlProkkaLLILHNAC_70 (original name was: gnl|Prokka|LLILHNAC_70); gnlProkkaLLILHNAC_71 (original name was: gnl|Prokka|LLILHNAC_71); gnlProkkaLLILHNAC_72 (original name was: gnl|Prokka|LLILHNAC_72); gnlProkkaLLILHNAC_73 (original name was: gnl|Prokka|LLILHNAC_73); gnlProkkaLLILHNAC_74 (original name was: gnl|Prokka|LLILHNAC_74); gnlProkkaLLILHNAC_75 (original name was: gnl|Prokka|LLILHNAC_75); gnlProkkaLLILHNAC_76 (original name was: gnl|Prokka|LLILHNAC_76); gnlProkkaLLILHNAC_77 (original name was: gnl|Prokka|LLILHNAC_77); gnlProkkaLLILHNAC_78 (original name was: gnl|Prokka|LLILHNAC_78); gnlProkkaLLILHNAC_79 (original name was: gnl|Prokka|LLILHNAC_79); gnlProkkaLLILHNAC_80 (original name was: gnl|Prokka|LLILHNAC_80); gnlProkkaLLILHNAC_81 (original name was: gnl|Prokka|LLILHNAC_81); gnlProkkaLLILHNAC_82 (original name was: gnl|Prokka|LLILHNAC_82); gnlProkkaLLILHNAC_83 (original name was: gnl|Prokka|LLILHNAC_83); gnlProkkaLLILHNAC_84 (original name was: gnl|Prokka|LLILHNAC_84); gnlProkkaLLILHNAC_85 (original name was: gnl|Prokka|LLILHNAC_85); gnlProkkaLLILHNAC_86 (original name was: gnl|Prokka|LLILHNAC_86); gnlProkkaLLILHNAC_87 (original name was: gnl|Prokka|LLILHNAC_87); gnlProkkaLLILHNAC_88 (original name was: gnl|Prokka|LLILHNAC_88); gnlProkkaLLILHNAC_89 (original name was: gnl|Prokka|LLILHNAC_89); gnlProkkaLLILHNAC_90 (original name was: gnl|Prokka|LLILHNAC_90); gnlProkkaLLILHNAC_91 (original name was: gnl|Prokka|LLILHNAC_91)

Compact view

gnlProkkaLLILHNAC_11 - Region 1 - RRE-containing

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Location: 1 - 16,605 nt. (total: 16,605 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLLILHNAC_11 - Region 2 - RRE-containing

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Location: 19,241 - 39,498 nt. (total: 20,258 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLLILHNAC_23 - Region 1 - ranthipeptide

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Location: 11,378 - 32,997 nt. (total: 21,620 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.