Select genomic region:
Overview
17.1
21.1
26.1
33.1
49.1

### Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOPNONDBM_20 (original name was: gnl|Prokka|OPNONDBM_20)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 17.1 | NRPS | 18,537 | 67,527 | dipeptide aldehydes | NRP | 88%

gnlProkkaOPNONDBM_24 (original name was: gnl|Prokka|OPNONDBM_24)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 21.1 | lanthipeptide-class-ii | 53,340 | 75,537 |

gnlProkkaOPNONDBM_29 (original name was: gnl|Prokka|OPNONDBM_29)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 26.1 | ranthipeptide | 45,648 | 64,728 |

gnlProkkaOPNONDBM_36 (original name was: gnl|Prokka|OPNONDBM_36)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 33.1 | RRE-containing,cyclic-lactone-autoinducer,lanthipeptide-class-ii | 41,706 | 84,295 | ruminococcin A | RiPP:Lanthipeptide | 21%

gnlProkkaOPNONDBM_52 (original name was: gnl|Prokka|OPNONDBM_52)

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 49.1 | cyclic-lactone-autoinducer | 9,357 | 24,796 |

Region | Type | From | To | Most similar known cluster | Similarity
--- | --- | --- | --- | --- | ---
Region 17.1 | NRPS | 18,537 | 67,527 | dipeptide aldehydes | NRP | 88%
Region 21.1 | lanthipeptide-class-ii | 53,340 | 75,537 |
Region 26.1 | ranthipeptide | 45,648 | 64,728 |
Region 33.1 | RRE-containing,cyclic-lactone-autoinducer,lanthipeptide-class-ii | 41,706 | 84,295 | ruminococcin A | RiPP:Lanthipeptide | 21%
Region 49.1 | cyclic-lactone-autoinducer | 9,357 | 24,796 |

No secondary metabolite regions were found in these records:
  gnlProkkaOPNONDBM_1 (original name was: gnl|Prokka|OPNONDBM_1)
  gnlProkkaOPNONDBM_2 (original name was: gnl|Prokka|OPNONDBM_2)
  gnlProkkaOPNONDBM_3 (original name was: gnl|Prokka|OPNONDBM_3)
  gnlProkkaOPNONDBM_4 (original name was: gnl|Prokka|OPNONDBM_4)
  gnlProkkaOPNONDBM_5 (original name was: gnl|Prokka|OPNONDBM_5)
  gnlProkkaOPNONDBM_6 (original name was: gnl|Prokka|OPNONDBM_6)
  gnlProkkaOPNONDBM_7 (original name was: gnl|Prokka|OPNONDBM_7)
  gnlProkkaOPNONDBM_8 (original name was: gnl|Prokka|OPNONDBM_8)
  gnlProkkaOPNONDBM_9 (original name was: gnl|Prokka|OPNONDBM_9)
  gnlProkkaOPNONDBM_10 (original name was: gnl|Prokka|OPNONDBM_10)
  gnlProkkaOPNONDBM_11 (original name was: gnl|Prokka|OPNONDBM_11)
  gnlProkkaOPNONDBM_12 (original name was: gnl|Prokka|OPNONDBM_12)
  gnlProkkaOPNONDBM_13 (original name was: gnl|Prokka|OPNONDBM_13)
  gnlProkkaOPNONDBM_17 (original name was: gnl|Prokka|OPNONDBM_17)
  gnlProkkaOPNONDBM_18 (original name was: gnl|Prokka|OPNONDBM_18)
  gnlProkkaOPNONDBM_19 (original name was: gnl|Prokka|OPNONDBM_19)
  gnlProkkaOPNONDBM_21 (original name was: gnl|Prokka|OPNONDBM_21)
  gnlProkkaOPNONDBM_22 (original name was: gnl|Prokka|OPNONDBM_22)
  gnlProkkaOPNONDBM_23 (original name was: gnl|Prokka|OPNONDBM_23)
  gnlProkkaOPNONDBM_25 (original name was: gnl|Prokka|OPNONDBM_25)
  gnlProkkaOPNONDBM_26 (original name was: gnl|Prokka|OPNONDBM_26)
  gnlProkkaOPNONDBM_27 (original name was: gnl|Prokka|OPNONDBM_27)
  gnlProkkaOPNONDBM_28 (original name was: gnl|Prokka|OPNONDBM_28)
  gnlProkkaOPNONDBM_30 (original name was: gnl|Prokka|OPNONDBM_30)
  gnlProkkaOPNONDBM_31 (original name was: gnl|Prokka|OPNONDBM_31)
  gnlProkkaOPNONDBM_32 (original name was: gnl|Prokka|OPNONDBM_32)
  gnlProkkaOPNONDBM_33 (original name was: gnl|Prokka|OPNONDBM_33)
  gnlProkkaOPNONDBM_34 (original name was: gnl|Prokka|OPNONDBM_34)
  gnlProkkaOPNONDBM_35 (original name was: gnl|Prokka|OPNONDBM_35)
  gnlProkkaOPNONDBM_37 (original name was: gnl|Prokka|OPNONDBM_37)
  gnlProkkaOPNONDBM_38 (original name was: gnl|Prokka|OPNONDBM_38)
  gnlProkkaOPNONDBM_39 (original name was: gnl|Prokka|OPNONDBM_39)
  gnlProkkaOPNONDBM_40 (original name was: gnl|Prokka|OPNONDBM_40)
  gnlProkkaOPNONDBM_41 (original name was: gnl|Prokka|OPNONDBM_41)
  gnlProkkaOPNONDBM_42 (original name was: gnl|Prokka|OPNONDBM_42)
  gnlProkkaOPNONDBM_43 (original name was: gnl|Prokka|OPNONDBM_43)
  gnlProkkaOPNONDBM_44 (original name was: gnl|Prokka|OPNONDBM_44)
  gnlProkkaOPNONDBM_45 (original name was: gnl|Prokka|OPNONDBM_45)
  gnlProkkaOPNONDBM_46 (original name was: gnl|Prokka|OPNONDBM_46)
  gnlProkkaOPNONDBM_47 (original name was: gnl|Prokka|OPNONDBM_47)
  gnlProkkaOPNONDBM_48 (original name was: gnl|Prokka|OPNONDBM_48)
  gnlProkkaOPNONDBM_49 (original name was: gnl|Prokka|OPNONDBM_49)
  gnlProkkaOPNONDBM_50 (original name was: gnl|Prokka|OPNONDBM_50)
  gnlProkkaOPNONDBM_51 (original name was: gnl|Prokka|OPNONDBM_51)
  gnlProkkaOPNONDBM_53 (original name was: gnl|Prokka|OPNONDBM_53)
  gnlProkkaOPNONDBM_54 (original name was: gnl|Prokka|OPNONDBM_54)
  gnlProkkaOPNONDBM_55 (original name was: gnl|Prokka|OPNONDBM_55)
  gnlProkkaOPNONDBM_56 (original name was: gnl|Prokka|OPNONDBM_56)
  gnlProkkaOPNONDBM_57 (original name was: gnl|Prokka|OPNONDBM_57)
  gnlProkkaOPNONDBM_58 (original name was: gnl|Prokka|OPNONDBM_58)
  gnlProkkaOPNONDBM_59 (original name was: gnl|Prokka|OPNONDBM_59)
  gnlProkkaOPNONDBM_60 (original name was: gnl|Prokka|OPNONDBM_60)
  gnlProkkaOPNONDBM_61 (original name was: gnl|Prokka|OPNONDBM_61)
  gnlProkkaOPNONDBM_62 (original name was: gnl|Prokka|OPNONDBM_62)
  gnlProkkaOPNONDBM_63 (original name was: gnl|Prokka|OPNONDBM_63)
  gnlProkkaOPNONDBM_64 (original name was: gnl|Prokka|OPNONDBM_64)
  gnlProkkaOPNONDBM_65 (original name was: gnl|Prokka|OPNONDBM_65)
  gnlProkkaOPNONDBM_66 (original name was: gnl|Prokka|OPNONDBM_66)
  gnlProkkaOPNONDBM_67 (original name was: gnl|Prokka|OPNONDBM_67)
  gnlProkkaOPNONDBM_68 (original name was: gnl|Prokka|OPNONDBM_68)
  gnlProkkaOPNONDBM_69 (original name was: gnl|Prokka|OPNONDBM_69)
  gnlProkkaOPNONDBM_70 (original name was: gnl|Prokka|OPNONDBM_70)
  gnlProkkaOPNONDBM_71 (original name was: gnl|Prokka|OPNONDBM_71)
  gnlProkkaOPNONDBM_72 (original name was: gnl|Prokka|OPNONDBM_72)
  gnlProkkaOPNONDBM_73 (original name was: gnl|Prokka|OPNONDBM_73)
  gnlProkkaOPNONDBM_74 (original name was: gnl|Prokka|OPNONDBM_74)
  gnlProkkaOPNONDBM_75 (original name was: gnl|Prokka|OPNONDBM_75)
  gnlProkkaOPNONDBM_76 (original name was: gnl|Prokka|OPNONDBM_76)
  gnlProkkaOPNONDBM_77 (original name was: gnl|Prokka|OPNONDBM_77)
  gnlProkkaOPNONDBM_78 (original name was: gnl|Prokka|OPNONDBM_78)
  gnlProkkaOPNONDBM_79 (original name was: gnl|Prokka|OPNONDBM_79)
  gnlProkkaOPNONDBM_80 (original name was: gnl|Prokka|OPNONDBM_80)
  gnlProkkaOPNONDBM_81 (original name was: gnl|Prokka|OPNONDBM_81)
  gnlProkkaOPNONDBM_82 (original name was: gnl|Prokka|OPNONDBM_82)
  gnlProkkaOPNONDBM_83 (original name was: gnl|Prokka|OPNONDBM_83)
  gnlProkkaOPNONDBM_84 (original name was: gnl|Prokka|OPNONDBM_84)
  gnlProkkaOPNONDBM_85 (original name was: gnl|Prokka|OPNONDBM_85)
  gnlProkkaOPNONDBM_86 (original name was: gnl|Prokka|OPNONDBM_86)
  gnlProkkaOPNONDBM_87 (original name was: gnl|Prokka|OPNONDBM_87)
  gnlProkkaOPNONDBM_88 (original name was: gnl|Prokka|OPNONDBM_88)
  gnlProkkaOPNONDBM_89 (original name was: gnl|Prokka|OPNONDBM_89)
  gnlProkkaOPNONDBM_90 (original name was: gnl|Prokka|OPNONDBM_90)
  gnlProkkaOPNONDBM_91 (original name was: gnl|Prokka|OPNONDBM_91)
  gnlProkkaOPNONDBM_92 (original name was: gnl|Prokka|OPNONDBM_92)
  gnlProkkaOPNONDBM_93 (original name was: gnl|Prokka|OPNONDBM_93)
  gnlProkkaOPNONDBM_94 (original name was: gnl|Prokka|OPNONDBM_94)
  gnlProkkaOPNONDBM_95 (original name was: gnl|Prokka|OPNONDBM_95)
  gnlProkkaOPNONDBM_96 (original name was: gnl|Prokka|OPNONDBM_96)
  gnlProkkaOPNONDBM_97 (original name was: gnl|Prokka|OPNONDBM_97)
  gnlProkkaOPNONDBM_98 (original name was: gnl|Prokka|OPNONDBM_98)
  gnlProkkaOPNONDBM_99 (original name was: gnl|Prokka|OPNONDBM_99)
  gnlProkkaOPNONDBM_100 (original name was: gnl|Prokka|OPNONDBM_100)
  gnlProkkaOPNONDBM_101 (original name was: gnl|Prokka|OPNONDBM_101)
  gnlProkkaOPNONDBM_102 (original name was: gnl|Prokka|OPNONDBM_102)
  gnlProkkaOPNONDBM_103 (original name was: gnl|Prokka|OPNONDBM_103)
  gnlProkkaOPNONDBM_104 (original name was: gnl|Prokka|OPNONDBM_104)
  gnlProkkaOPNONDBM_105 (original name was: gnl|Prokka|OPNONDBM_105)
  gnlProkkaOPNONDBM_106 (original name was: gnl|Prokka|OPNONDBM_106)
  gnlProkkaOPNONDBM_107 (original name was: gnl|Prokka|OPNONDBM_107)
  gnlProkkaOPNONDBM_108 (original name was: gnl|Prokka|OPNONDBM_108)
  gnlProkkaOPNONDBM_109 (original name was: gnl|Prokka|OPNONDBM_109)
  gnlProkkaOPNONDBM_110 (original name was: gnl|Prokka|OPNONDBM_110)
  gnlProkkaOPNONDBM_111 (original name was: gnl|Prokka|OPNONDBM_111)
  gnlProkkaOPNONDBM_112 (original name was: gnl|Prokka|OPNONDBM_112)

Compact view
gnlProkkaOPNONDBM_20 - Region 1 - NRPS
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 18,537 - 67,527 nt. (total: 48,991 nt) Show pHMM detection rules used
NRPS: cds(Condensation and (AMP-binding or A-OX))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
NRPS/PKS domains
KnownClusterBlast
NRPS/PKS modules
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Detailed domain annotation
Shows NRPS- and PKS-related domains for each feature that contains them. Click on each domain for more information about the domain's location, consensus monomer prediction, and other details.
A domain glossary is available here, and an explanation of the visualisation is available here.
Selected features only
Show module domains
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.
Module view
Shows module structures for each candidate cluster in NRPS and PKS regions.
Genes are shown in predicted order, and are only present when containing at least one complete module.
A domain glossary is available here, and an explanation of the visualisation is available here.
Legend
NRPS/PKS products
NRPS/PKS substrates
Predicted core structure(s)
Shows estimated product structure and polymer for each candidate cluster in the region. To show the product, click on the expander or the candidate cluster feature drawn in the overview.
For candidate cluster 1, location 18536 - 67527:
Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:
  (X - X - X)

Direct lookup in NORINE database: strict or relaxed
Link to NORINE database query form
NRPS/PKS substrate predictions
Shows the predicted substrates for each adenylation domain and acyltransferase within genes. Each gene prediction can be expanded to view detailed predictions of each domain. Each prediction can be expanded to view the predictions by tool (and, for some tools, further expanded for extra details).

ctg17_41: X - X - X
  AMP-binding (22..421): X
  nrpys: Leu, Trp
  SVM prediction details:
    Predicted physicochemical class:
      N/A
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Tiny, hydrophilic, transition to aliphatic (Gly, Ala)
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DVLTDGGISK
    Nearest Stachelhaus code(s):
      Leu or Trp DVLTDGGISK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (1035..1423): X
  nrpys: Leu, Trp
  SVM prediction details:
    Predicted physicochemical class:
      hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
    Large clusters prediction:
      Apolar, aliphatic (Gly, Ala, Val, Leu, Ile, Abu, Ival)
    Small clusters prediction:
      Aliphatic, branched hydrophobic (Val, Leu, Ile, Abu, Ival)
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAMFSGAIFK
    Nearest Stachelhaus code(s):
      Leu or Trp DAMFSGAIFK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)
  AMP-binding (2029..2420): X
  nrpys: Leu, Trp
  SVM prediction details:
    Predicted physicochemical class:
      N/A
    Large clusters prediction:
      Aromatic side chain (Phe, Trp, Ph-Gly, Tyr, bOH-Tyr)
    Small clusters prediction:
      N/A
    Single AA prediction:
      N/A
  Stachelhaus prediction details:
    Stachelhaus sequence:
      DAITTGGVSK
    Nearest Stachelhaus code(s):
      Leu or Trp DAITTGGVSK (100% 8Å match)
    Stachelhaus code match:
      100% (strong)

gnlProkkaOPNONDBM_24 - Region 1 - lanthipeptide-class-ii
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 53,340 - 75,537 nt. (total: 22,198 nt) Show pHMM detection rules used
Region on contig edge.
lanthipeptide-class-ii: cds(LANC_like and DUF4135)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Lanthipeptides
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

Lanthipeptide predictions
Shows the possible core peptides for each biosynthetic enzyme.
Includes CompaRiPPson results for any available databases, with a detailed explanation here.

#### Lanthipeptide(s) for ctg21_72

allorf_74328_74513
Leader:
MSLNFSTYAYITKSPVRYSDAAVFSA
Core:
A A P D Y H H P E L F P V L L L F H T R E L Y P H M T E V T C F Q T L
Core with dehydrations:
A A P D Y H H P E L F P V L L L F H Dhb R E L Y P H M Dhb E V Dhb Cys F Q Dhb L

#### antiSMASH-DB 4.0 matches for allorf_74328_74513

14.3% NZ_CP058552.1: Lanthipeptides: allorf_1481579_1481740_lanthipeptide
23
Y P H M T E V T C F Q T L
35
Y H+ + C Q T+
6
Y K H V Q K T N C V Q T I
18

#### Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine
Lanthipeptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists the number of lanthionine bridges, possible molecular weights, and the scores for cleavage site prediction and RODEO.

allorf_74328_74513 - Class II
  Cleavage pHMM score: -6.80
  RODEO score: 0
  Monoisotopic mass: 4093.1 Da
  Molecular weight: 4095.7 Da
  Number of bridges: 1
  Alternative weights
    (assuming N unmodified Ser/Thr residues)
    4113.7 Da N = 1
    4131.7 Da N = 2
    4149.7 Da N = 3

gnlProkkaOPNONDBM_29 - Region 1 - ranthipeptide
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 45,648 - 64,728 nt. (total: 19,081 nt) Show pHMM detection rules used
Region on contig edge.
ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.

gnlProkkaOPNONDBM_36 - Region 1 - RRE-containing,cyclic-lactone-autoinducer,lanthipeptide-class-ii
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 41,706 - 84,295 nt. (total: 42,590 nt) Show pHMM detection rules used
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)
lanthipeptide-class-ii: cds(LANC_like and DUF4135)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
zoom to selection
Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Lanthipeptides
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
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Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

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Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
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Lanthipeptide predictions
Shows the possible core peptides for each biosynthetic enzyme.
Includes CompaRiPPson results for any available databases, with a detailed explanation here.

#### Lanthipeptide(s) for ctg33_68

ctg33_69
Leader:
MSEMRNPITREENFS
Core:
N P A G N V M M E L Q E A D L N K F V A G A G E T R N S G G V L C T S T A E C Y F G T L L K P C C P K K
Core with dehydrations:
N P A G N V M M E L Q E A D L N K F V A G A G E Dhb R N Dha G G V L Cys Dhb Dha Dhb A E Cys Y F G Dhb L L K P Cys Cys P K K

#### MIBiG 3.1 matches for ctg33_69

15.4% BGC0002110 (QKV49893.1): Lanthipeptide: birimositide
27
N S G G V L C T S T A E C
39
N+G G C T T E C
14
N N G G-W C T L T K E C
25
11.5% BGC0000517 (BAB04173.1): Lanthipeptide: haloduracin β or haloduracin α
30
G V L C T S T A E C
39
G C T T E C
14
G A Y C T L T V E C
23
7.7% BGC0001229 (SBI_06990): Lanthipeptide: SBI-06990 A1 or SBI-06989 A2
33
C T S T A E C
39
C T + E C
28
C T L S K E C
34

#### antiSMASH-DB 4.0 matches for ctg33_69

100.0% NZ_CZAY01000009.1 and 12 others:
NZ_CZBA01000009.1 Lanthipeptides: ARA06_RS08755_lanthipeptide NZ_CZBB01000003.1 Lanthipeptides: ARA29_RS04330_lanthipeptide NZ_JADPDU010000003.1 Lanthipeptides: I4V06_RS02990_lanthipeptide NZ_JAOQJU010000001.1 Lanthipeptides: OCV99_RS00835_lanthipeptide NZ_JAQCSY010000025.1 Lanthipeptides: PGZ10_RS13865_lanthipeptide NZ_JAQEDC010000020.1 Lanthipeptides: PHA23_RS12680_lanthipeptide NZ_QRZZ01000001.1 Lanthipeptides: DWV87_RS01465_lanthipeptide NZ_QSUB01000001.1 Lanthipeptides: DXB81_RS03120_lanthipeptide NZ_QUCI01000019.1 Lanthipeptides: DW648_RS14740_lanthipeptide NZ_QULD01000003.1 Lanthipeptides: DXB83_RS07060_lanthipeptide NZ_QULI01000007.1 Lanthipeptides: DXB71_RS08970_lanthipeptide NZ_SLZV01000043.1 Lanthipeptides: EDD74_RS14380_lanthipeptide
Lanthipeptides: ARA07_RS06830_lanthipeptide
1
N P A G N V M M E L Q E A D L N K F V A G A G E T R N S G G V L C T S T A E C Y F G T L L K P C C P K K
52
N P A G N V M M E L Q E A D L N K F V A G A G E T R N S G G V L C T S T A E C Y F G T L L K P C C P K K
1
N P A G N V M M E L Q E A D L N K F V A G A G E T R N S G G V L C T S T A E C Y F G T L L K P C C P K K
52
36.5% NZ_QRHZ01000008.1 and 2 others:
NZ_QSRF01000021.1 Lanthipeptides: DXC87_RS15310_lanthipeptide NZ_QUEQ01000033.1 Lanthipeptides: DXA48_RS19000_lanthipeptide
Lanthipeptides: DW272_RS13830_lanthipeptide
22
A G E T R N S G G V L C T S T A E C Y F G T L L K P C C
49
A G E R N S G G+ C T S T E C G T L C C
1
A G E P R N S G G M F C T S T G E C N M G T L N I F C C
28
32.7% NZ_CYXV01000003.1: Lanthipeptides: ARB75_RS04585_lanthipeptide
22
A G E T R N S G G V L C T S T A E C Y F G T L L K P C C
49
A G R N S G G+ C T T E C G T +K C C
1
A G V A R N S G G I A C T L T G E C N I G T H I K F C C
28
with 44 more sequence matches
25.0% NZ_CP071875.1: Lanthipeptides: J4I02_RS02880_lanthipeptide
23
G E T R N S G G V L C T S T A E C Y F G T L L K P C C
49
G +S G G +C T T E C G T C C
2
G I P N H S G G A I C T L T H E C-A G T H W Y S C C
27
21.2% NC_009480.1 and 10 others:
NZ_CP033724.1 Lanthipeptides: EFE39_RS10220_lanthipeptide NZ_CP047051.1 Lanthipeptides: GRD74_RS10365_lanthipeptide NZ_CP047054.1 Lanthipeptides: GRD61_RS10460_lanthipeptide NZ_CP053860.1 Lanthipeptides: DQP62_RS10825_lanthipeptide NZ_CP076352.1 Lanthipeptides: KN218_RS09900_lanthipeptide NZ_CP085137.1 Lanthipeptides: LHJ48_RS10290_lanthipeptide NZ_CP085140.1 Lanthipeptides: LHJ47_RS10305_lanthipeptide NZ_CP095274.1 Lanthipeptides: MU580_RS10460_lanthipeptide NZ_PSTW01000024.1 Lanthipeptides: C5C03_RS09675_lanthipeptide NZ_SISU01000002.1 Lanthipeptides: EOG37_RS09890_lanthipeptide
Lanthipeptides: CMM_RS10575_lanthipeptide
27
N S G G V L C T S T A E C Y F G T L L K P C
48
+S G L C T T E C G T++ C
1
S S S G W L C T L T I E C--G T I I C A C
20
21.2% NZ_CP036455.1 and 1 other:
NZ_JAODUN010000003.1 Lanthipeptides: BXY51_RS10560_lanthipeptide
Lanthipeptides: EKD16_RS25235_lanthipeptide
28
S G G V L C T S T A E C Y F G T L L K P C
48
S G +C T T E C G T L+ C
1
S S G W V C T L T I E C--G T L V C A C
19
21.2% NZ_CP045267.1 and 1 other:
NZ_CP045267.1 Lanthipeptides: FDZ14_RS00155_lanthipeptide
Lanthipeptides: FDZ14_RS00155_lanthipeptide
30
G V L C T S T A E C Y F G T L L K P C C P K K
52
G V+ T+T+E C Y G T C C +
3
G V V K T A T S E C Y L G T F A F A C C L A R
25
21.2% NZ_CP061274.1 and 1 other:
NZ_JADKRR010000001.1 Lanthipeptides: ITJ40_RS10085_lanthipeptide
Lanthipeptides: H9X71_RS09850_lanthipeptide
28
S G G V L C T S T A E C Y F G T L L K P C
48
S G L C T T E C G T + C
2
S S G W L C T L T I E C--G T F I C A C
20
21.2% NZ_CP117876.1: Lanthipeptides: PQ460_RS01735_lanthipeptide
30
G V L C T S T A E C Y F G T L L K P C C P K K
52
G V+ T+T+E C Y G T+ C C +
3
G V V K T A T S E C Y L G T V A F I C C L G R
25
21.2% NZ_FQZK01000006.1 and 2 others:
NZ_FQZK01000006.1 Lanthipeptides: BUE45_RS13060_lanthipeptide NZ_FQZK01000006.1 Lanthipeptides: BUE45_RS13060_lanthipeptide
Lanthipeptides: BUE45_RS13060_lanthipeptide
16
N K F V A G A G E T R N S G G V L C T S T A E C
39
N +A A +R N+ G C T T E C
11
N P L I A C A L L S R N N T G R F C T V T V E C
34
21.2% NZ_JAFCGV010000005.1: Lanthipeptides: JQI09_RS04275_lanthipeptide
30
G V L C T S T A E C Y F G T L L K P C C P K K
52
G V+ T+T+E C Y G T C C +
3
G V V K T A T S E C Y L G T F A F V C C L A R
25
21.2% NZ_NTSR01000029.1 and 1 other:
NZ_NTSR01000029.1 Lanthipeptides: CN358_RS25180_lanthipeptide
Lanthipeptides: CN358_RS25180_lanthipeptide
9
E L Q E A D L N K F V A G A G E T R N S G G V L C T S T A E C
39
A D K G G G +C T T E C
10
S F N S A D Y I K L S I G L G N N----G Y I C T Y T V E C
36
19.2% NZ_AUBN01000022.1: Lanthipeptides: G448_RS16025_lanthipeptide
28
S G G V L C T S T A E C Y F G T L L K P C
48
S G C T T E C G T + C
2
S S G W F C T L T I E C--G T F I C A C
20
19.2% NZ_CAKMMP010000011.1: Lanthipeptides: L6H98_RS19925_lanthipeptide
21
G A G E T R N S G G V L C T S T A E C Y F G T L
44
A E S G G V C T + E C++ ++
2
A A I E A A K S G G V F C T V S H E C H Y N S V
25
19.2% NZ_CP016767.1: Lanthipeptides: BCV50_RS18735_lanthipeptide
27
N S G G V L C T S T A E C Y F G T L
44
N+ G C T +A E C F G T+
17
N N Y G Q Y C T V S A E C-F G T I
33
19.2% NZ_CP028130.1: Lanthipeptides: C7V51_RS14690_lanthipeptide
28
S G G V L C T S T A E C Y F G T L L K P C
48
S G +C T T E C G T++ C
2
S S G W M C T L T I E C--G T I I C A C
20
19.2% NZ_CP083176.1 and 4 others:
NZ_JABUHD010000002.1 Lanthipeptides: HRR08_RS05415_lanthipeptide NZ_LSLF01000001.1 Lanthipeptides: AXE72_RS04025_lanthipeptide NZ_PNHB01000001.1 Lanthipeptides: CJ210_RS02800_lanthipeptide NZ_QJVA01000001.1 Lanthipeptides: D0T19_RS02755_lanthipeptide
Lanthipeptides: K9E37_RS06280_lanthipeptide
30
G V L C T S T A E C Y F G T--L L K P C C
49
G V+ T T E C+ T L C C
3
G V M H T L T H E C H M N T W Q F L L T C C
24
19.2% NZ_CP102267.1 and 11 others:
NZ_FMUW01000051.1 Lanthipeptides: BLP57_RS16830_lanthipeptide NZ_JAQDBP010000004.1 Lanthipeptides: PGY07_RS07130_lanthipeptide NZ_JAQEHQ010000024.1 Lanthipeptides: PGR68_RS13915_lanthipeptide NZ_JAQESL010000043.1 Lanthipeptides: PG840_RS15980_lanthipeptide NZ_JAQESS010000001.1 Lanthipeptides: PG808_RS00050_lanthipeptide NZ_LN913006.1 Lanthipeptides: BN3261_RS01470_lanthipeptide NZ_QRPQ01000011.1 Lanthipeptides: DWZ74_RS14610_lanthipeptide NZ_QRZZ01000003.1 Lanthipeptides: DWV87_RS03120_lanthipeptide NZ_QSJW01000012.1 Lanthipeptides: DW767_RS16305_lanthipeptide NZ_QSKF01000004.1 Lanthipeptides: DW740_RS06255_lanthipeptide NZ_QUJJ01000004.1 Lanthipeptides: DW748_RS03580_lanthipeptide
Lanthipeptides: NQ550_RS04155_lanthipeptide
32
L C T S T A E C Y F G T L L K P C C
49
C T S T E C +G T++ C C
2
F C T S T K E C N W G T I M F V C C
19
19.2% NZ_FMVM01000006.1 and 2 others:
NZ_RIAS01000010.1 Lanthipeptides: EC604_RS18225_lanthipeptide NZ_VEJI01000010.1 Lanthipeptides: FS576_RS22075_lanthipeptide
Lanthipeptides: BLQ13_RS10365_lanthipeptide
21
G A G E T R N S G G V L C T S T A E C Y F G T L
44
A E + S G G V C T + E C++ ++
2
A A I E D K K S G G V F C T V S H E C H Y N S V
25
19.2% NZ_GG666304.1: Lanthipeptides: HMPREF0077_RS09155_lanthipeptide
26
R N S G G V L C T S T A E C Y F G T L L
45
++S G C T T E C F T L+
13
K D S C G H G C T I T T E C P F A T L I
32
19.2% NZ_JAESIP010000017.1 and 3 others:
NZ_LT907978.1 Lanthipeptides: EHLA_RS12685_lanthipeptide NZ_QRYY01000029.1 Lanthipeptides: DWW21_RS18370_lanthipeptide NZ_SPFW01000044.1 Lanthipeptides: FGQ81_RS16590_lanthipeptide
Lanthipeptides: JMK14_RS12260_lanthipeptide
28
S G G V L C T S T A E C Y F G T L L
45
S G L C T T A E C T++
15
S C G R L C T G T A E C P I M T I I
32
19.2% NZ_JALAMD010000003.1 and 1 other:
NZ_JALAMZ010000007.1 Lanthipeptides: MOC43_RS14030_lanthipeptide
Lanthipeptides: MOB22_RS05100_lanthipeptide
27
N S G G V L C T S T A E C Y F G T L
44
N+ G C T +A E C F G T+
17
N N Y G K Y C T V S A E C-F G T I
33
17.3% NZ_ALVU02000002.1 and 1 other:
NZ_ALVU02000002.1 Lanthipeptides: SYN7509_RS28800_lanthipeptide
Lanthipeptides: SYN7509_RS28800_lanthipeptide
16
N K F V A G A G E T R N S G G V L C T
34
K F G E+ N S G + C T
1
R K F T Y G G D E S C N S G I I A C T
19
17.3% NZ_BMRY01000003.1 and 28 others:
NZ_BMRY01000003.1 Lanthipeptides: IE140_RS12370_lanthipeptide NZ_BMSZ01000006.1 Lanthipeptides: IE135_RS12780_lanthipeptide NZ_BMSZ01000006.1 Lanthipeptides: IE135_RS12780_lanthipeptide NZ_BNBJ01000003.1 Lanthipeptides: IE304_RS05285_lanthipeptide NZ_BNBJ01000003.1 Lanthipeptides: IE304_RS05285_lanthipeptide NZ_CP021707.1 Lanthipeptides: CCZ36_RS18205_lanthipeptide NZ_CP079114.1 Lanthipeptides: KV381_RS19425_lanthipeptide NZ_CP079114.1 Lanthipeptides: KV381_RS19425_lanthipeptide NZ_CP084357.1 Lanthipeptides: LEL86_RS34965_lanthipeptide NZ_CP084357.1 Lanthipeptides: LEL86_RS34965_lanthipeptide NZ_CP116355.1 Lanthipeptides: KPP03845_RS17815_lanthipeptide NZ_CP116355.1 Lanthipeptides: KPP03845_RS17815_lanthipeptide NZ_JALDPQ010000054.1 Lanthipeptides: MQC87_RS11020_lanthipeptide NZ_JALDPQ010000054.1 Lanthipeptides: MQC87_RS11020_lanthipeptide NZ_JAMFLF010000021.1 Lanthipeptides: M1212_RS32880_lanthipeptide NZ_JAMFLF010000021.1 Lanthipeptides: M1212_RS32880_lanthipeptide NZ_JNLT01000014.1 Lanthipeptides: CD02_RS38630_lanthipeptide NZ_JNLT01000014.1 Lanthipeptides: CD02_RS38630_lanthipeptide NZ_JNZV01000231.1 Lanthipeptides: BG84_RS0100145_lanthipeptide NZ_JNZV01000231.1 Lanthipeptides: BG84_RS0100145_lanthipeptide NZ_KZ819178.1 Lanthipeptides: DBP20_RS18455_lanthipeptide NZ_KZ819178.1 Lanthipeptides: DBP20_RS18455_lanthipeptide NZ_LZRD01000017.1 Lanthipeptides: A3Q37_RS19720_lanthipeptide NZ_LZRD01000017.1 Lanthipeptides: A3Q37_RS19720_lanthipeptide NZ_NNBN01000001.1 Lanthipeptides: CG717_RS03735_lanthipeptide NZ_NNBN01000001.1 Lanthipeptides: CG717_RS03735_lanthipeptide NZ_WHOM01000078.1 Lanthipeptides: GCN81_RS29300_lanthipeptide NZ_WHOM01000078.1 Lanthipeptides: GCN81_RS29300_lanthipeptide
Lanthipeptides: IE140_RS12370_lanthipeptide
21
G A G E T R N S G G V L C T S T A E C
39
G A + G C T+T A E C
15
G A S Y V L G N N G N F C T A T A E C
33
17.3% NZ_CP034669.1: Lanthipeptides: EJ065_RS32040_lanthipeptide
26
R N S G G V L C T S T A E C
39
R N S G +C T T E C
7
R N S C G Y V C T L T T E C
20
17.3% NZ_CP040409.1 and 4 others:
NZ_CP040411.1 Lanthipeptides: FE334_RS06825_lanthipeptide NZ_CP040422.1 Lanthipeptides: FE323_RS09430_lanthipeptide NZ_JH601103.1 Lanthipeptides: HMPREF9703_RS02710_lanthipeptide NZ_NAQX01000046.1 Lanthipeptides: B8A46_RS06295_lanthipeptide
Lanthipeptides: FE336_RS08590_lanthipeptide
26
R N S G G V L C T S T A E C
39
R+S G C T T A E C
12
R H S C G R A C T I T A E C
25
17.3% NZ_CP086242.1 and 1 other:
NZ_CP086245.1 Lanthipeptides: LL037_RS25615_lanthipeptide
Lanthipeptides: LL038_RS25355_lanthipeptide
28
S G G V L C T S T A E C-Y F G T L
44
S G +C T+T E C Y F +
2
S S G A I C T A T T E C T Y F S A I
19
17.3% NZ_CP092836.1: Lanthipeptides: MLD62_RS30280_lanthipeptide
14
D L N K F V A G A G E T R N S G G V L C T S T A E C
39
+L+ +A A + + G C T +A E C
2
N L S A A I A D A A G L K G N Y G K F C T Y S A E C
27
17.3% NZ_JAENHX010000011.1: Lanthipeptides: JIN86_RS20375_lanthipeptide
15
L N K F V A G A G E T R N S G G V L C T S T A E C
39
+++ +A A N+ G+ C T +A E C
7
I S R A I A N A V G L G N N Y G M A C T W S A E C
31
17.3% NZ_QORY01000016.1 and 1 other:
NZ_QORY01000016.1 Lanthipeptides: DT250_RS18255_lanthipeptide
Lanthipeptides: DT250_RS18255_lanthipeptide
30
G V L C T S T A E C Y F G T L L K P
47
G +C T T E C G L P
23
G R I C T Y T L E C T A G C N L N P
40
16.4% NZ_AP023359.1: Lanthipeptides: Prubr_RS34925_lanthipeptide
1
N P A G N V M M--E L Q E A D L N K F V A G A G E T
25
N P A G + + + E A D+ +G G T
13
N P A G P L F L G G K Y A E A D I T A T G S G G G A T
39
15.4% NZ_CP018620.1 and 1 other:
NZ_CP062165.1 Lanthipeptides: JNUCC31_RS16755_lanthipeptide
Lanthipeptides: BS614_RS05680_lanthipeptide
24
E T R N S G G V L C T S T A E C Y F G T L
44
+ + S G G V C T + E C++ ++
5
D A Q A S G G V F C T V S H E C H Y N S V
25
15.4% NZ_CP022163.1: Lanthipeptides: MEBOL_RS24465_lanthipeptide
27
N S G G V L C T S T A E C
39
N S G G +C T + E C
10
N S G G W I C T Y S T E C
22
15.4% NZ_CP030280.1 and 5 others:
NZ_CP030280.1 Lanthipeptides: DQQ01_RS07655_lanthipeptide NZ_CP030280.1 Lanthipeptides: DQQ01_RS07650_lanthipeptide NZ_CP030280.1 Lanthipeptides: DQQ01_RS07645_lanthipeptide NZ_CP030280.1 Lanthipeptides: DQQ01_RS07650_lanthipeptide NZ_CP030280.1 Lanthipeptides: DQQ01_RS07645_lanthipeptide
Lanthipeptides: DQQ01_RS07655_lanthipeptide
23
G E T R N S G--G V L C T S T A E C
39
G++++ G G L C+ T E C
1
G K S K D W G N D G Y L C S V T V E C
19
15.4% NZ_CP034248.1: Lanthipeptides: EIM92_RS14995_lanthipeptide
28
S G G V L C T S T A E C Y F G T L
44
S G G V+C T + E C++ ++
6
S G G V I C T I S H E C H Y N S V
22
15.4% NZ_CP086142.1 and 3 others:
NZ_CP086142.1 Lanthipeptides: LL065_RS25460_lanthipeptide NZ_CP086142.1 Lanthipeptides: LL065_RS25455_lanthipeptide NZ_CP086142.1 Lanthipeptides: LL065_RS25450_lanthipeptide
Lanthipeptides: LL065_RS25465_lanthipeptide
29
G G V L C T S T A E C Y F G T L
44
G G V+ T T E C Y+ ++
2
G G V I T T F T H E C Y Y N S V
17
15.4% NZ_CP091285.1: Lanthipeptides: L2Z92_RS16370_lanthipeptide
23
G E T R N S G G V L C T S T A E C
39
G+T R + G C +T A C
1
G K T R T A S G S T C D N T A V C
17
15.4% NZ_CP114875.1: Lanthipeptides: O4Z47_RS14375_lanthipeptide
26
R N S G G V L C T S T A E C
39
+N S G +C T T+E C
5
K N S S G D I C T L T S E C
18
15.4% NZ_CP115450.1 and 1 other:
NZ_CP115450.1 Lanthipeptides: O1G21_RS35415_lanthipeptide
Lanthipeptides: O1G21_RS35415_lanthipeptide
30
G V L C T S T A E C
39
G L C T T A E C
22
G Y L C T V T A E C
31
15.4% NZ_JADPCZ010000011.1 and 1 other:
NZ_OW659477.1 Lanthipeptides: NMG62_RS06660_lanthipeptide
Lanthipeptides: I4W03_RS06785_lanthipeptide
26
R N S G G V L C T S T A E C Y F G T L L
45
++S G C T T E C T++
13
K H S C G R A C T V T T E C P I A T I I
32
15.4% NZ_JALMDK010000017.1: Lanthipeptides: allorf_059288_059443_lanthipeptide
28
S G G V L C T S T A E C
39
S G G +C T T E C
2
S G G Y I C T L T W E C
13
13.5% NZ_BCEY01000006.1 and 1 other:
NZ_BCEY01000006.1 Lanthipeptides: GOZ53_RS01290_lanthipeptide
Lanthipeptides: GOZ53_RS01290_lanthipeptide
30
G V L C T S T A E C
39
G +C T T A E C
23
G W I C T W T A E C
32
13.5% NZ_CP077726.1 and 12 others:
NZ_CP077726.1 Lanthipeptides: KTC92_RS18420_lanthipeptide NZ_CP077726.1 Lanthipeptides: KTC92_RS18415_lanthipeptide NZ_CP077726.1 Lanthipeptides: KTC92_RS18410_lanthipeptide NZ_CP077726.1 Lanthipeptides: KTC92_RS18405_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19070_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19065_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19060_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19055_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19050_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19045_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19040_lanthipeptide NZ_CP086248.1 Lanthipeptides: LL036_RS19035_lanthipeptide
Lanthipeptides: KTC92_RS18425_lanthipeptide
30
G V L C T S T A E C Y F G T L
44
G V+ T T E C Y+ ++
3
G V I T T F T H E C Y Y N S V
17
13.5% NZ_JAQDBP010000004.1 and 18 others:
NZ_JAQDBP010000004.1 Lanthipeptides: PGY07_RS07085_lanthipeptide NZ_JAQEAL010000002.1 Lanthipeptides: PGU65_RS02165_lanthipeptide NZ_JAQESL010000010.1 Lanthipeptides: PG840_RS09145_lanthipeptide NZ_JAQEUC010000007.1 Lanthipeptides: PG788_RS06860_lanthipeptide NZ_QRHW01000005.1 Lanthipeptides: DW641_RS05035_lanthipeptide NZ_QROS01000011.1 Lanthipeptides: DW021_RS13630_lanthipeptide NZ_QRPQ01000001.1 Lanthipeptides: DWZ74_RS02490_lanthipeptide NZ_QRZZ01000003.1 Lanthipeptides: DWV87_RS03165_lanthipeptide NZ_QRZZ01000003.1 Lanthipeptides: DWV87_RS03165_lanthipeptide NZ_QSJW01000012.1 Lanthipeptides: DW767_RS16350_lanthipeptide NZ_QSJW01000012.1 Lanthipeptides: DW767_RS16350_lanthipeptide NZ_QSKF01000004.1 Lanthipeptides: DW740_RS06305_lanthipeptide NZ_QSKF01000004.1 Lanthipeptides: DW740_RS06305_lanthipeptide NZ_QTZB01000014.1 Lanthipeptides: DXC15_RS13895_lanthipeptide NZ_QUCI01000011.1 Lanthipeptides: DW648_RS10830_lanthipeptide NZ_QUJJ01000004.1 Lanthipeptides: DW748_RS03630_lanthipeptide NZ_QUJJ01000004.1 Lanthipeptides: DW748_RS03630_lanthipeptide NZ_QUKU01000006.1 Lanthipeptides: DXC27_RS05470_lanthipeptide
Lanthipeptides: PGY07_RS07085_lanthipeptide
24
E T R N S G G V L C T S T A E C
39
++ S G V+C T + E C
8
D S L A S S G V V C T I S V E C
23
13.5% NZ_NTSR01000034.1: Lanthipeptides: CN358_RS26370_lanthipeptide
30
G V L C T S T A E C Y F
41
G +C T +A E C F
20
G T M C T V S A E C M F
31
11.5% NZ_VDYW01000008.1: Lanthipeptides: allorf_137107_137307_lanthipeptide
40
Y F G T L L K P C C P
50
Y G +L C C P
10
Y V G D I L L N C C P
20
9.6% NZ_AP018194.1: Lanthipeptides: CA739_RS01285_lanthipeptide
39
C Y F G T L L K P C
48
C+ T++K P C
2
C F V S T I I K P C
11
allorf_066703_066801
Leader:
MWKKKYRERGKSQGY
Core:
L K V T S R K S Q C S W Y I I T V
Core with dehydrations:
L K V Dhb Dha R K Dha Q Cys Dha W Y I I Dhb V

#### antiSMASH-DB 4.0 matches for allorf_066703_066801

100.0% NZ_CZAY01000009.1 and 11 others:
NZ_CZBA01000009.1 Lanthipeptides: allorf_046797_046895_lanthipeptide NZ_CZBB01000003.1 Lanthipeptides: allorf_027211_027309_lanthipeptide NZ_JADPDU010000003.1 Lanthipeptides: allorf_107261_107359_lanthipeptide NZ_JAOQJU010000001.1 Lanthipeptides: allorf_163570_163668_lanthipeptide NZ_JAQCSY010000025.1 Lanthipeptides: allorf_10713_10811_lanthipeptide NZ_JAQEDC010000020.1 Lanthipeptides: allorf_15206_15304_lanthipeptide NZ_QRZZ01000001.1 Lanthipeptides: allorf_316866_316964_lanthipeptide NZ_QSUB01000001.1 Lanthipeptides: allorf_0632573_0632671_lanthipeptide NZ_QUCI01000019.1 Lanthipeptides: allorf_10688_10786_lanthipeptide NZ_QULD01000003.1 Lanthipeptides: allorf_363255_363353_lanthipeptide NZ_QULI01000007.1 Lanthipeptides: allorf_134293_134391_lanthipeptide
Lanthipeptides: allorf_037119_037217_lanthipeptide
1
L K V T S R K S Q C S W Y I I T V
17
L K V T S R K S Q C S W Y I I T V
1
L K V T S R K S Q C S W Y I I T V
17
9.3% NZ_BJTV01000007.1: Lanthipeptides: allorf_023321_023548_lanthipeptide
7
K S Q C S W Y I I T
16
++ C S W Y+ T
29
R T A C S W Y V R T
38

#### Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine
Lanthipeptides
Core peptide predictions
Lists the possible core peptides in the region. Each core peptide lists the number of lanthionine bridges, possible molecular weights, and the scores for cleavage site prediction and RODEO.

ctg33_69 - Class II
  Cleavage pHMM score: -7.00
  RODEO score: 0
  Monoisotopic mass: 5354.6 Da
  Molecular weight: 5358.1 Da
  Number of bridges: 4
  Alternative weights
    (assuming N unmodified Ser/Thr residues)
    5376.2 Da N = 1
    5394.2 Da N = 2
allorf_066703_066801 - Class II
  Cleavage pHMM score: -7.00
  RODEO score: 0
  Monoisotopic mass: 1921.1 Da
  Molecular weight: 1922.3 Da
  Number of bridges: 1
  Alternative weights
    (assuming N unmodified Ser/Thr residues)
    1940.3 Da N = 1
    1958.3 Da N = 2
    1976.3 Da N = 3
    1994.4 Da N = 4

gnlProkkaOPNONDBM_52 - Region 1 - cyclic-lactone-autoinducer
Shows the layout of the region, marking coding sequences and areas of interest. Clicking a gene will select it and show any relevant details. Clicking an area feature (e.g. a candidate cluster) will select all coding sequences within that area. Double clicking an area feature will zoom to that area. Multiple genes and area features can be selected by clicking them while holding the Ctrl key.
More detailed help is available here.
Download region GenBank file
Download region SVG
Location: 9,357 - 24,796 nt. (total: 15,440 nt) Show pHMM detection rules used
Region on contig edge.
cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

#### Legend:

core biosynthetic genes
additional biosynthetic genes
transport-related genes
regulatory genes
other genes
resistance
reset view
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Gene details
Shows details of the most recently selected gene, including names, products, location, and other annotations.
Select a gene to view the details available for it
Gene overview
KnownClusterBlast
Gene/CDS overview
A brief tabular summary of genes/CDS features within the region.
Filtering the table will also search biosynthetic profiles and gene function data. If enabled, the overview will then zoom to show the area covered by the filtered selection.
Genes selected in the region drawing above will be marked in the table with an indicator to the left of the gene name.
Filter:
Automatically zoom to filtered/selected features

Identifier | Product | Length | Function | Sequence | NCBI Blast | Filter details
--- | --- | --- | --- | --- | --- | ---
|  | NT | AA |  | NT | AA |  |

No genes match the given filter
Similar known gene clusters from MIBiG 3.1
Shows clusters from the MiBIG database that are similar to the current region. Genes marked with the same colour are interrelated. White genes have no relationship.
Click on reference genes to show details of similarities to genes within the current region.
Click on an accession to open that entry in the MiBIG database.

No matches found.