GCA_018138165.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBECEMMKC_27 (original name was: gnl|Prokka|BECEMMKC_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	terpene	24,763	45,644

gnlProkkaBECEMMKC_33 (original name was: gnl|Prokka|BECEMMKC_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RiPP-like	1	8,952

gnlProkkaBECEMMKC_36 (original name was: gnl|Prokka|BECEMMKC_36)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	cyclic-lactone-autoinducer	14,112	30,899

gnlProkkaBECEMMKC_37 (original name was: gnl|Prokka|BECEMMKC_37)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	T3PKS	90,118	131,287

Region	Type	From	To	Similarity
Region 13.1	terpene	24,763	45,644
Region 19.1	RiPP-like	1	8,952
Region 22.1	cyclic-lactone-autoinducer	14,112	30,899
Region 23.1	T3PKS	90,118	131,287

No secondary metabolite regions were found in these records:: gnlProkkaBECEMMKC_1 (original name was: gnl|Prokka|BECEMMKC_1); gnlProkkaBECEMMKC_2 (original name was: gnl|Prokka|BECEMMKC_2); gnlProkkaBECEMMKC_13 (original name was: gnl|Prokka|BECEMMKC_13); gnlProkkaBECEMMKC_18 (original name was: gnl|Prokka|BECEMMKC_18); gnlProkkaBECEMMKC_19 (original name was: gnl|Prokka|BECEMMKC_19); gnlProkkaBECEMMKC_20 (original name was: gnl|Prokka|BECEMMKC_20); gnlProkkaBECEMMKC_21 (original name was: gnl|Prokka|BECEMMKC_21); gnlProkkaBECEMMKC_22 (original name was: gnl|Prokka|BECEMMKC_22); gnlProkkaBECEMMKC_23 (original name was: gnl|Prokka|BECEMMKC_23); gnlProkkaBECEMMKC_24 (original name was: gnl|Prokka|BECEMMKC_24); gnlProkkaBECEMMKC_25 (original name was: gnl|Prokka|BECEMMKC_25); gnlProkkaBECEMMKC_26 (original name was: gnl|Prokka|BECEMMKC_26); gnlProkkaBECEMMKC_28 (original name was: gnl|Prokka|BECEMMKC_28); gnlProkkaBECEMMKC_29 (original name was: gnl|Prokka|BECEMMKC_29); gnlProkkaBECEMMKC_30 (original name was: gnl|Prokka|BECEMMKC_30); gnlProkkaBECEMMKC_31 (original name was: gnl|Prokka|BECEMMKC_31); gnlProkkaBECEMMKC_32 (original name was: gnl|Prokka|BECEMMKC_32); gnlProkkaBECEMMKC_34 (original name was: gnl|Prokka|BECEMMKC_34); gnlProkkaBECEMMKC_35 (original name was: gnl|Prokka|BECEMMKC_35); gnlProkkaBECEMMKC_38 (original name was: gnl|Prokka|BECEMMKC_38); gnlProkkaBECEMMKC_39 (original name was: gnl|Prokka|BECEMMKC_39); gnlProkkaBECEMMKC_40 (original name was: gnl|Prokka|BECEMMKC_40); gnlProkkaBECEMMKC_41 (original name was: gnl|Prokka|BECEMMKC_41); gnlProkkaBECEMMKC_42 (original name was: gnl|Prokka|BECEMMKC_42); gnlProkkaBECEMMKC_43 (original name was: gnl|Prokka|BECEMMKC_43); gnlProkkaBECEMMKC_44 (original name was: gnl|Prokka|BECEMMKC_44); gnlProkkaBECEMMKC_45 (original name was: gnl|Prokka|BECEMMKC_45); gnlProkkaBECEMMKC_46 (original name was: gnl|Prokka|BECEMMKC_46); gnlProkkaBECEMMKC_47 (original name was: gnl|Prokka|BECEMMKC_47); gnlProkkaBECEMMKC_48 (original name was: gnl|Prokka|BECEMMKC_48); gnlProkkaBECEMMKC_49 (original name was: gnl|Prokka|BECEMMKC_49); gnlProkkaBECEMMKC_50 (original name was: gnl|Prokka|BECEMMKC_50); gnlProkkaBECEMMKC_51 (original name was: gnl|Prokka|BECEMMKC_51); gnlProkkaBECEMMKC_52 (original name was: gnl|Prokka|BECEMMKC_52); gnlProkkaBECEMMKC_53 (original name was: gnl|Prokka|BECEMMKC_53); gnlProkkaBECEMMKC_54 (original name was: gnl|Prokka|BECEMMKC_54); gnlProkkaBECEMMKC_55 (original name was: gnl|Prokka|BECEMMKC_55); gnlProkkaBECEMMKC_56 (original name was: gnl|Prokka|BECEMMKC_56); gnlProkkaBECEMMKC_57 (original name was: gnl|Prokka|BECEMMKC_57); gnlProkkaBECEMMKC_58 (original name was: gnl|Prokka|BECEMMKC_58); gnlProkkaBECEMMKC_59 (original name was: gnl|Prokka|BECEMMKC_59); gnlProkkaBECEMMKC_60 (original name was: gnl|Prokka|BECEMMKC_60); gnlProkkaBECEMMKC_61 (original name was: gnl|Prokka|BECEMMKC_61); gnlProkkaBECEMMKC_62 (original name was: gnl|Prokka|BECEMMKC_62); gnlProkkaBECEMMKC_63 (original name was: gnl|Prokka|BECEMMKC_63); gnlProkkaBECEMMKC_64 (original name was: gnl|Prokka|BECEMMKC_64); gnlProkkaBECEMMKC_65 (original name was: gnl|Prokka|BECEMMKC_65); gnlProkkaBECEMMKC_66 (original name was: gnl|Prokka|BECEMMKC_66); gnlProkkaBECEMMKC_67 (original name was: gnl|Prokka|BECEMMKC_67); gnlProkkaBECEMMKC_68 (original name was: gnl|Prokka|BECEMMKC_68); gnlProkkaBECEMMKC_69 (original name was: gnl|Prokka|BECEMMKC_69); gnlProkkaBECEMMKC_70 (original name was: gnl|Prokka|BECEMMKC_70); gnlProkkaBECEMMKC_71 (original name was: gnl|Prokka|BECEMMKC_71); gnlProkkaBECEMMKC_72 (original name was: gnl|Prokka|BECEMMKC_72); gnlProkkaBECEMMKC_73 (original name was: gnl|Prokka|BECEMMKC_73); gnlProkkaBECEMMKC_74 (original name was: gnl|Prokka|BECEMMKC_74); gnlProkkaBECEMMKC_75 (original name was: gnl|Prokka|BECEMMKC_75); gnlProkkaBECEMMKC_76 (original name was: gnl|Prokka|BECEMMKC_76); gnlProkkaBECEMMKC_77 (original name was: gnl|Prokka|BECEMMKC_77); gnlProkkaBECEMMKC_78 (original name was: gnl|Prokka|BECEMMKC_78); gnlProkkaBECEMMKC_79 (original name was: gnl|Prokka|BECEMMKC_79); gnlProkkaBECEMMKC_80 (original name was: gnl|Prokka|BECEMMKC_80); gnlProkkaBECEMMKC_81 (original name was: gnl|Prokka|BECEMMKC_81); gnlProkkaBECEMMKC_82 (original name was: gnl|Prokka|BECEMMKC_82); gnlProkkaBECEMMKC_83 (original name was: gnl|Prokka|BECEMMKC_83); gnlProkkaBECEMMKC_84 (original name was: gnl|Prokka|BECEMMKC_84); gnlProkkaBECEMMKC_85 (original name was: gnl|Prokka|BECEMMKC_85); gnlProkkaBECEMMKC_86 (original name was: gnl|Prokka|BECEMMKC_86); gnlProkkaBECEMMKC_87 (original name was: gnl|Prokka|BECEMMKC_87); gnlProkkaBECEMMKC_88 (original name was: gnl|Prokka|BECEMMKC_88); gnlProkkaBECEMMKC_89 (original name was: gnl|Prokka|BECEMMKC_89); gnlProkkaBECEMMKC_92 (original name was: gnl|Prokka|BECEMMKC_92); gnlProkkaBECEMMKC_103 (original name was: gnl|Prokka|BECEMMKC_103)

Compact view

gnlProkkaBECEMMKC_27 - Region 1 - terpene

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Location: 24,763 - 45,644 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBECEMMKC_33 - Region 1 - RiPP-like

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Location: 1 - 8,952 nt. (total: 8,952 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBECEMMKC_36 - Region 1 - cyclic-lactone-autoinducer

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Location: 14,112 - 30,899 nt. (total: 16,788 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBECEMMKC_37 - Region 1 - T3PKS

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Location: 90,118 - 131,287 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.