GCA_018138185.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPAMFEDIP_59 (original name was: gnl|Prokka|PAMFEDIP_59)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	terpene	24,808	45,689

gnlProkkaPAMFEDIP_70 (original name was: gnl|Prokka|PAMFEDIP_70)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	1	8,914

gnlProkkaPAMFEDIP_115 (original name was: gnl|Prokka|PAMFEDIP_115)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	T3PKS	84,553	115,395

Region	Type	From	To	Similarity
Region 11.1	terpene	24,808	45,689
Region 22.1	RiPP-like	1	8,914
Region 67.1	T3PKS	84,553	115,395

No secondary metabolite regions were found in these records:: gnlProkkaPAMFEDIP_1 (original name was: gnl|Prokka|PAMFEDIP_1); gnlProkkaPAMFEDIP_2 (original name was: gnl|Prokka|PAMFEDIP_2); gnlProkkaPAMFEDIP_13 (original name was: gnl|Prokka|PAMFEDIP_13); gnlProkkaPAMFEDIP_23 (original name was: gnl|Prokka|PAMFEDIP_23); gnlProkkaPAMFEDIP_33 (original name was: gnl|Prokka|PAMFEDIP_33); gnlProkkaPAMFEDIP_44 (original name was: gnl|Prokka|PAMFEDIP_44); gnlProkkaPAMFEDIP_53 (original name was: gnl|Prokka|PAMFEDIP_53); gnlProkkaPAMFEDIP_56 (original name was: gnl|Prokka|PAMFEDIP_56); gnlProkkaPAMFEDIP_57 (original name was: gnl|Prokka|PAMFEDIP_57); gnlProkkaPAMFEDIP_58 (original name was: gnl|Prokka|PAMFEDIP_58); gnlProkkaPAMFEDIP_60 (original name was: gnl|Prokka|PAMFEDIP_60); gnlProkkaPAMFEDIP_61 (original name was: gnl|Prokka|PAMFEDIP_61); gnlProkkaPAMFEDIP_62 (original name was: gnl|Prokka|PAMFEDIP_62); gnlProkkaPAMFEDIP_63 (original name was: gnl|Prokka|PAMFEDIP_63); gnlProkkaPAMFEDIP_64 (original name was: gnl|Prokka|PAMFEDIP_64); gnlProkkaPAMFEDIP_65 (original name was: gnl|Prokka|PAMFEDIP_65); gnlProkkaPAMFEDIP_66 (original name was: gnl|Prokka|PAMFEDIP_66); gnlProkkaPAMFEDIP_67 (original name was: gnl|Prokka|PAMFEDIP_67); gnlProkkaPAMFEDIP_68 (original name was: gnl|Prokka|PAMFEDIP_68); gnlProkkaPAMFEDIP_69 (original name was: gnl|Prokka|PAMFEDIP_69); gnlProkkaPAMFEDIP_71 (original name was: gnl|Prokka|PAMFEDIP_71); gnlProkkaPAMFEDIP_72 (original name was: gnl|Prokka|PAMFEDIP_72); gnlProkkaPAMFEDIP_73 (original name was: gnl|Prokka|PAMFEDIP_73); gnlProkkaPAMFEDIP_74 (original name was: gnl|Prokka|PAMFEDIP_74); gnlProkkaPAMFEDIP_75 (original name was: gnl|Prokka|PAMFEDIP_75); gnlProkkaPAMFEDIP_76 (original name was: gnl|Prokka|PAMFEDIP_76); gnlProkkaPAMFEDIP_77 (original name was: gnl|Prokka|PAMFEDIP_77); gnlProkkaPAMFEDIP_78 (original name was: gnl|Prokka|PAMFEDIP_78); gnlProkkaPAMFEDIP_79 (original name was: gnl|Prokka|PAMFEDIP_79); gnlProkkaPAMFEDIP_80 (original name was: gnl|Prokka|PAMFEDIP_80); gnlProkkaPAMFEDIP_81 (original name was: gnl|Prokka|PAMFEDIP_81); gnlProkkaPAMFEDIP_82 (original name was: gnl|Prokka|PAMFEDIP_82); gnlProkkaPAMFEDIP_83 (original name was: gnl|Prokka|PAMFEDIP_83); gnlProkkaPAMFEDIP_84 (original name was: gnl|Prokka|PAMFEDIP_84); gnlProkkaPAMFEDIP_85 (original name was: gnl|Prokka|PAMFEDIP_85); gnlProkkaPAMFEDIP_86 (original name was: gnl|Prokka|PAMFEDIP_86); gnlProkkaPAMFEDIP_87 (original name was: gnl|Prokka|PAMFEDIP_87); gnlProkkaPAMFEDIP_88 (original name was: gnl|Prokka|PAMFEDIP_88); gnlProkkaPAMFEDIP_89 (original name was: gnl|Prokka|PAMFEDIP_89); gnlProkkaPAMFEDIP_90 (original name was: gnl|Prokka|PAMFEDIP_90); gnlProkkaPAMFEDIP_91 (original name was: gnl|Prokka|PAMFEDIP_91); gnlProkkaPAMFEDIP_92 (original name was: gnl|Prokka|PAMFEDIP_92); gnlProkkaPAMFEDIP_93 (original name was: gnl|Prokka|PAMFEDIP_93); gnlProkkaPAMFEDIP_94 (original name was: gnl|Prokka|PAMFEDIP_94); gnlProkkaPAMFEDIP_95 (original name was: gnl|Prokka|PAMFEDIP_95); gnlProkkaPAMFEDIP_96 (original name was: gnl|Prokka|PAMFEDIP_96); gnlProkkaPAMFEDIP_97 (original name was: gnl|Prokka|PAMFEDIP_97); gnlProkkaPAMFEDIP_98 (original name was: gnl|Prokka|PAMFEDIP_98); gnlProkkaPAMFEDIP_99 (original name was: gnl|Prokka|PAMFEDIP_99); gnlProkkaPAMFEDIP_100 (original name was: gnl|Prokka|PAMFEDIP_100); gnlProkkaPAMFEDIP_101 (original name was: gnl|Prokka|PAMFEDIP_101); gnlProkkaPAMFEDIP_102 (original name was: gnl|Prokka|PAMFEDIP_102); gnlProkkaPAMFEDIP_103 (original name was: gnl|Prokka|PAMFEDIP_103); gnlProkkaPAMFEDIP_104 (original name was: gnl|Prokka|PAMFEDIP_104); gnlProkkaPAMFEDIP_105 (original name was: gnl|Prokka|PAMFEDIP_105); gnlProkkaPAMFEDIP_106 (original name was: gnl|Prokka|PAMFEDIP_106); gnlProkkaPAMFEDIP_107 (original name was: gnl|Prokka|PAMFEDIP_107); gnlProkkaPAMFEDIP_108 (original name was: gnl|Prokka|PAMFEDIP_108); gnlProkkaPAMFEDIP_109 (original name was: gnl|Prokka|PAMFEDIP_109); gnlProkkaPAMFEDIP_110 (original name was: gnl|Prokka|PAMFEDIP_110); gnlProkkaPAMFEDIP_111 (original name was: gnl|Prokka|PAMFEDIP_111); gnlProkkaPAMFEDIP_112 (original name was: gnl|Prokka|PAMFEDIP_112); gnlProkkaPAMFEDIP_113 (original name was: gnl|Prokka|PAMFEDIP_113); gnlProkkaPAMFEDIP_114 (original name was: gnl|Prokka|PAMFEDIP_114); gnlProkkaPAMFEDIP_116 (original name was: gnl|Prokka|PAMFEDIP_116); gnlProkkaPAMFEDIP_117 (original name was: gnl|Prokka|PAMFEDIP_117); gnlProkkaPAMFEDIP_118 (original name was: gnl|Prokka|PAMFEDIP_118); gnlProkkaPAMFEDIP_119 (original name was: gnl|Prokka|PAMFEDIP_119); gnlProkkaPAMFEDIP_120 (original name was: gnl|Prokka|PAMFEDIP_120); gnlProkkaPAMFEDIP_121 (original name was: gnl|Prokka|PAMFEDIP_121); gnlProkkaPAMFEDIP_122 (original name was: gnl|Prokka|PAMFEDIP_122); gnlProkkaPAMFEDIP_123 (original name was: gnl|Prokka|PAMFEDIP_123); gnlProkkaPAMFEDIP_124 (original name was: gnl|Prokka|PAMFEDIP_124); gnlProkkaPAMFEDIP_125 (original name was: gnl|Prokka|PAMFEDIP_125); gnlProkkaPAMFEDIP_126 (original name was: gnl|Prokka|PAMFEDIP_126); gnlProkkaPAMFEDIP_127 (original name was: gnl|Prokka|PAMFEDIP_127); gnlProkkaPAMFEDIP_128 (original name was: gnl|Prokka|PAMFEDIP_128); gnlProkkaPAMFEDIP_129 (original name was: gnl|Prokka|PAMFEDIP_129); gnlProkkaPAMFEDIP_130 (original name was: gnl|Prokka|PAMFEDIP_130); gnlProkkaPAMFEDIP_131 (original name was: gnl|Prokka|PAMFEDIP_131); gnlProkkaPAMFEDIP_132 (original name was: gnl|Prokka|PAMFEDIP_132); gnlProkkaPAMFEDIP_133 (original name was: gnl|Prokka|PAMFEDIP_133); gnlProkkaPAMFEDIP_134 (original name was: gnl|Prokka|PAMFEDIP_134); gnlProkkaPAMFEDIP_135 (original name was: gnl|Prokka|PAMFEDIP_135); gnlProkkaPAMFEDIP_136 (original name was: gnl|Prokka|PAMFEDIP_136); gnlProkkaPAMFEDIP_137 (original name was: gnl|Prokka|PAMFEDIP_137); gnlProkkaPAMFEDIP_138 (original name was: gnl|Prokka|PAMFEDIP_138); gnlProkkaPAMFEDIP_139 (original name was: gnl|Prokka|PAMFEDIP_139); gnlProkkaPAMFEDIP_140 (original name was: gnl|Prokka|PAMFEDIP_140)

Compact view

gnlProkkaPAMFEDIP_59 - Region 1 - terpene

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Location: 24,808 - 45,689 nt. (total: 20,882 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPAMFEDIP_70 - Region 1 - RiPP-like

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Location: 1 - 8,914 nt. (total: 8,914 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPAMFEDIP_115 - Region 1 - T3PKS

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Location: 84,553 - 115,395 nt. (total: 30,843 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.