GCA_018499415.1 - 6 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDCHGNEAJ_10 (original name was: gnl|Prokka|DCHGNEAJ_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	T3PKS	191,078	232,244
Region 10.2	RaS-RiPP	1,013,599	1,027,293

gnlProkkaDCHGNEAJ_21 (original name was: gnl|Prokka|DCHGNEAJ_21)

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	RiPP-like	281,665	300,508

gnlProkkaDCHGNEAJ_32 (original name was: gnl|Prokka|DCHGNEAJ_32)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	RiPP-like	75,523	87,619	quinolidomicin A	Polyketide	3%

gnlProkkaDCHGNEAJ_35 (original name was: gnl|Prokka|DCHGNEAJ_35)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	lassopeptide	12,207	36,423	cochonodin I	RiPP	100%
Region 20.2	RiPP-like	46,317	64,766

Region	Type	From	To	Most similar known cluster	Similarity
Region 10.1	T3PKS	191,078	232,244
Region 10.2	RaS-RiPP	1,013,599	1,027,293
Region 16.1	RiPP-like	281,665	300,508
Region 17.1	RiPP-like	75,523	87,619	quinolidomicin A	Polyketide	3%
Region 20.1	lassopeptide	12,207	36,423	cochonodin I	RiPP	100%
Region 20.2	RiPP-like	46,317	64,766

No secondary metabolite regions were found in these records:: gnlProkkaDCHGNEAJ_1 (original name was: gnl|Prokka|DCHGNEAJ_1); gnlProkkaDCHGNEAJ_2 (original name was: gnl|Prokka|DCHGNEAJ_2); gnlProkkaDCHGNEAJ_3 (original name was: gnl|Prokka|DCHGNEAJ_3); gnlProkkaDCHGNEAJ_4 (original name was: gnl|Prokka|DCHGNEAJ_4); gnlProkkaDCHGNEAJ_5 (original name was: gnl|Prokka|DCHGNEAJ_5); gnlProkkaDCHGNEAJ_6 (original name was: gnl|Prokka|DCHGNEAJ_6); gnlProkkaDCHGNEAJ_7 (original name was: gnl|Prokka|DCHGNEAJ_7); gnlProkkaDCHGNEAJ_8 (original name was: gnl|Prokka|DCHGNEAJ_8); gnlProkkaDCHGNEAJ_9 (original name was: gnl|Prokka|DCHGNEAJ_9); gnlProkkaDCHGNEAJ_11 (original name was: gnl|Prokka|DCHGNEAJ_11); gnlProkkaDCHGNEAJ_12 (original name was: gnl|Prokka|DCHGNEAJ_12); gnlProkkaDCHGNEAJ_13 (original name was: gnl|Prokka|DCHGNEAJ_13); gnlProkkaDCHGNEAJ_14 (original name was: gnl|Prokka|DCHGNEAJ_14); gnlProkkaDCHGNEAJ_15 (original name was: gnl|Prokka|DCHGNEAJ_15); gnlProkkaDCHGNEAJ_33 (original name was: gnl|Prokka|DCHGNEAJ_33); gnlProkkaDCHGNEAJ_34 (original name was: gnl|Prokka|DCHGNEAJ_34); gnlProkkaDCHGNEAJ_36 (original name was: gnl|Prokka|DCHGNEAJ_36); gnlProkkaDCHGNEAJ_37 (original name was: gnl|Prokka|DCHGNEAJ_37); gnlProkkaDCHGNEAJ_38 (original name was: gnl|Prokka|DCHGNEAJ_38)

Compact view

gnlProkkaDCHGNEAJ_10 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 191,078 - 232,244 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDCHGNEAJ_10 - Region 2 - RaS-RiPP

Download region GenBank file

Download region SVG

Location: 1,013,599 - 1,027,293 nt. (total: 13,695 nt) Show pHMM detection rules used

Region on contig edge.

RaS-RiPP: (PF04055 and TIGR01716)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDCHGNEAJ_21 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 281,665 - 300,508 nt. (total: 18,844 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDCHGNEAJ_32 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 75,523 - 87,619 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaDCHGNEAJ_35 - Region 1 - lassopeptide

Download region GenBank file

Download region SVG

Location: 12,207 - 36,423 nt. (total: 24,217 nt) Show pHMM detection rules used

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

Lasso peptide predictions

Lassopeptide(s) for ctg20_15

ctg20_15

Leader:

MNYTKPVIEKISTFKSGTS

Full core:

GLVAGRFRDIFGGRALFLIRI

Putative macrolactam:

GLVAGRFRD

antiSMASH-DB 4.0 matches for ctg20_15

100.0% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS10200_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GLVAGRFRDIFGGRALFLIRI

1

GLVAGRFRDIFGGRALFLIRI

21

95.2% NZ_FILX01000006.1and 2 others:

NZ_JAGFUY010000013.1 Lassopeptides: J5652_RS05355_lassopeptideNZ_JAGFVF010000023.1 Lassopeptides: J5568_RS09760_lassopeptide

Lassopeptides: A1363_RS11380_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GLVAG FRDIFGGRALFLIRI

1

GLVAGSFRDIFGGRALFLIRI

21

65.2% NC_012468.1and 9 others:

NZ_CGXY01000023.1 Lassopeptides: AQD87_RS12295_lassopeptideNZ_CLXO01000005.1 Lassopeptides: AFA99_RS11895_lassopeptideNZ_CMLU01000007.1 Lassopeptides: AEP96_RS12330_lassopeptideNZ_CP014326.1 Lassopeptides: AXK38_RS11095_lassopeptideNZ_CRCU01000004.1 Lassopeptides: AYW54_RS12245_lassopeptideNZ_FDQP01000002.1 Lassopeptides: A1S42_RS12075_lassopeptideNZ_FHTX02000015.1 Lassopeptides: A0693_RS10110_lassopeptideNZ_FZBS01000003.1 Lassopeptides: CFY35_RS11490_lassopeptideNZ_RXXR01000008.1 Lassopeptides: EKA98_RS05595_lassopeptide

Lassopeptides: SP70585_RS13230_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+FRDIFGGRA+ IRI

1

GLWTGKFRDIFGGRAIVRIRI

21

with 23 more sequence matches

65.2% NZ_BJED01000004.1: Lassopeptides: FFR60_RS05785_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+FRD+FGGRALF I I

1

GLWTGKFRDVFGGRALFQIVI

21

60.9% NC_021023.1and 25 others:

NZ_CABGPX010000005.1 Lassopeptides: FN189_RS04890_lassopeptideNZ_CABGTR010000001.1 Lassopeptides: FN307_RS01775_lassopeptideNZ_CABGXT010000046.1 Lassopeptides: FN373_RS15575_lassopeptideNZ_CP045045.1 Lassopeptides: F9293_RS05110_lassopeptideNZ_CP046111.1 Lassopeptides: GKQ56_RS05625_lassopeptideNZ_CP063980.1 Lassopeptides: ISN59_RS06410_lassopeptideNZ_CP097069.1 Lassopeptides: M2912_RS09265_lassopeptideNZ_CP110068.1 Lassopeptides: OLM02_RS09865_lassopeptideNZ_CP116962.1 Lassopeptides: PO880_RS04740_lassopeptideNZ_GG670372.1 Lassopeptides: EFDG_RS21040_lassopeptideNZ_GL457197.1 Lassopeptides: HMPREF9517_RS19205_lassopeptideNZ_JADOEP010000002.1 Lassopeptides: IW492_RS01515_lassopeptideNZ_JADPEP010000046.1 Lassopeptides: I4U96_RS13395_lassopeptideNZ_JTKS01000001.1 Lassopeptides: QI17_RS14045_lassopeptideNZ_JTKX01000023.1 Lassopeptides: QR19_RS15990_lassopeptideNZ_KB932331.1 Lassopeptides: Q9A_RS18260_lassopeptideNZ_KB944632.1 Lassopeptides: WMI_RS18340_lassopeptideNZ_KB944658.1 Lassopeptides: WMM_RS18400_lassopeptideNZ_KB944694.1 Lassopeptides: WO3_RS18855_lassopeptideNZ_KB944828.1 Lassopeptides: WOM_RS18345_lassopeptideNZ_KE351156.1 Lassopeptides: D924_RS19170_lassopeptideNZ_KE352620.1 Lassopeptides: D350_RS18085_lassopeptideNZ_NAQY01000001.1 Lassopeptides: B6A11_RS15210_lassopeptideNZ_SCHR01000003.1 Lassopeptides: EQ847_RS03410_lassopeptideNZ_SMGV01000009.1 Lassopeptides: EYY48_RS11015_lassopeptide

Lassopeptides: ENT_RS07390_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+FRD+FGGRALF + I

1

GLWTGKFRDVFGGRALFQVVI

21

60.9% NZ_NCVL01000001.1and 1 other:

NZ_VMMF01000036.1 Lassopeptides: HT717_RS09510_lassopeptide

Lassopeptides: B7694_RS10650_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+F DIFGGRA+F I I

1

GLWFGKFTDIFGGRAVFQIVI

21

56.5% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS00440_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G FRD+FGGRA+ +RI

1

GLWTGNFRDVFGGRAIVRVRI

21

52.4% NZ_CP106992.1: Lassopeptides: NDS46_RS23370_lassopeptide

1

GLVAGRFRDIFGGRALFLIR

20

GL G+F+D+FGGRA+ I

1

GLWTGKFKDLFGGRAVIKIE

20

52.2% NZ_AULE01000001.1: Lassopeptides: H509_RS27430_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G++ D+FGGRAL I I

1

GLWTGKYTDVFGGRALIKIII

21

52.2% NZ_FILX01000006.1and 1 other:

NZ_JAGFVF010000023.1 Lassopeptides: allorf_10827_10955_lassopeptide

Lassopeptides: allorf_42148_42276_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G+FRD+FGGRA+ + I

1

GLWTGKFRDVFGGRAIVRVTI

21

52.2% NZ_KI912489.1: Lassopeptides: allorf_514087_514215_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G++ DIFGGRA+ I I

1

GLCFGKWNDIFGGRAIIKIEI

21

52.2% NZ_KI912489.1: Lassopeptides: allorf_514674_514802_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

GL G++ DIFGGRA+ I I

1

GLWTGKWTDIFGGRAIIKIEI

21

50.0% NZ_CP053549.1: Lassopeptides: HMI60_RS00570_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

G+ GR+RDIFGGRA + +

1

GVWFGRWRDIFGGRAFVKVDV

21

50.0% NZ_JADKSM010000003.1and 2 others:

NZ_PSXX01000017.1 Lassopeptides: C5E05_RS18625_lassopeptideNZ_PSXZ01000003.1 Lassopeptides: C5E07_RS02640_lassopeptide

Lassopeptides: ITJ61_RS18070_lassopeptide

1

GLVAGRFRDIFGGRALFLIRI

21

G+ GR+RDIFGGRA + +

1

GVWFGRWRDIFGGRAFIKVTV

21

47.6% NZ_JAMDLY010000010.1and 4 others:

NZ_JAPDMW010000034.1 Lassopeptides: OF778_RS29475_lassopeptideNZ_JMLT01000016.1 Lassopeptides: BP95_RS33025_lassopeptideNZ_LS992241.1 Lassopeptides: PBLR_RS07315_lassopeptideNZ_SADY01000011.1 Lassopeptides: C7Y44_RS26425_lassopeptide

Lassopeptides: M5X04_RS09885_lassopeptide

1

GLVAGRFRDIFGGRAL

16

G+ GR+RD+ GGRAL

1

GIWFGRYRDVLGGRAL

16

45.5% NZ_KI912489.1: Lassopeptides: allorf_513617_513742_lassopeptide

1

GLVAGRFRDIFGGRALF

17

GL G+FRDIFG + F

1

GLWYGKFRDIFGAKTYF

17

42.9% NZ_CP118615.1: Lassopeptides: PVK37_RS09555_lassopeptide

8

RDIFGGRALFLIR

20

RDIFG RAL +I

8

RDIFGYRALIVIH

20

42.9% NZ_KI912489.1: Lassopeptides: allorf_513868_514041_lassopeptide

1

GLVAGRFRDIFGGRALFLIR

20

G+ G++ DIFGGRA +

1

GVWFGKWTDIFGGRAFIHVE

20

39.1% NZ_FNCN01000047.1: Lassopeptides: BLQ73_RS31810_lassopeptide

4

AGRFRDIFGGRALFLIR

20

+ R RDI G RAL +I

4

SARERDILGFRALIVIH

20

38.1% NZ_JABBWU010000001.1: Lassopeptides: HHX30_RS02470_lassopeptide

1

GLVAGRFRDIFGGRAL

16

G +RDIFGGR

1

GYPWWDYRDIFGGRTF

16

38.1% NZ_LITU01000056.1: Lassopeptides: AMS66_RS32315_lassopeptide

1

GLVAGRFRDIFGGRALFLIR

20

G AG++ D++GG+A I

1

GFFAGKWTDVYGGKAFVRIE

20

38.1% NZ_NGKY01000001.1: Lassopeptides: A5819_RS19010_lassopeptide

1

GLVAGRFRDIFGGRALFLI

19

G+ GR++D+FGG+A +

1

GVWFGRWKDVFGGKAFIAV

19

33.3% NZ_NCVC01000017.1: Lassopeptides: B7703_RS09865_lassopeptide

4

AGRFRDIFGGRALFLIR

20

R RD+ G RAL +I

4

TARERDLLGFRALIVIH

20

28.6% NZ_FTNI01000001.1: Lassopeptides: allorf_119291_119425_lassopeptide

1

GLVAGRFRDIFGGRAL

16

G +RD+FGG

1

GYPWWDYRDLFGGHTF

16

27.3% NZ_KE951412.1: Lassopeptides: allorf_43700_43828_lassopeptide

5

GRFRDIFGGR

14

GR+ D +GGR

5

GRWNDYYGGR

14

23.8% NZ_JAJQQQ010000018.1: Lassopeptides: LUZ28_RS25695_lassopeptide

8

RDIFGGRALF

17

+DI GG+ L

7

KDILGGKQLL

16

Lassopeptide(s) for ctg20_16

ctg20_16

Leader:

MKYCKPTFEPIATFKKDTK

Full core:

GLWTGNFRDVFGGRAIVRVKIEF

Putative macrolactam:

GLWTGNFRD

antiSMASH-DB 4.0 matches for ctg20_16

95.7% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS00440_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIEF

23

GLWTGNFRDVFGGRAIVRV+IEF

1

GLWTGNFRDVFGGRAIVRVRIEF

23

91.3% NZ_FILX01000006.1and 1 other:

NZ_JAGFVF010000023.1 Lassopeptides: allorf_10827_10955_lassopeptide

Lassopeptides: allorf_42148_42276_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIEF

23

GLWTG FRDVFGGRAIVRV IEF

1

GLWTGKFRDVFGGRAIVRVTIEF

23

82.6% NC_012468.1and 9 others:

NZ_CGXY01000023.1 Lassopeptides: AQD87_RS12295_lassopeptideNZ_CLXO01000005.1 Lassopeptides: AFA99_RS11895_lassopeptideNZ_CMLU01000007.1 Lassopeptides: AEP96_RS12330_lassopeptideNZ_CP014326.1 Lassopeptides: AXK38_RS11095_lassopeptideNZ_CRCU01000004.1 Lassopeptides: AYW54_RS12245_lassopeptideNZ_FDQP01000002.1 Lassopeptides: A1S42_RS12075_lassopeptideNZ_FHTX02000015.1 Lassopeptides: A0693_RS10110_lassopeptideNZ_FZBS01000003.1 Lassopeptides: CFY35_RS11490_lassopeptideNZ_RXXR01000008.1 Lassopeptides: EKA98_RS05595_lassopeptide

Lassopeptides: SP70585_RS13230_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIEF

23

GLWTG FRD+FGGRAIVR++IEF

1

GLWTGKFRDIFGGRAIVRIRIEF

23

with 22 more sequence matches

69.6% NC_021023.1and 25 others:

NZ_CABGPX010000005.1 Lassopeptides: FN189_RS04890_lassopeptideNZ_CABGTR010000001.1 Lassopeptides: FN307_RS01775_lassopeptideNZ_CABGXT010000046.1 Lassopeptides: FN373_RS15575_lassopeptideNZ_CP045045.1 Lassopeptides: F9293_RS05110_lassopeptideNZ_CP046111.1 Lassopeptides: GKQ56_RS05625_lassopeptideNZ_CP063980.1 Lassopeptides: ISN59_RS06410_lassopeptideNZ_CP097069.1 Lassopeptides: M2912_RS09265_lassopeptideNZ_CP110068.1 Lassopeptides: OLM02_RS09865_lassopeptideNZ_CP116962.1 Lassopeptides: PO880_RS04740_lassopeptideNZ_GG670372.1 Lassopeptides: EFDG_RS21040_lassopeptideNZ_GL457197.1 Lassopeptides: HMPREF9517_RS19205_lassopeptideNZ_JADOEP010000002.1 Lassopeptides: IW492_RS01515_lassopeptideNZ_JADPEP010000046.1 Lassopeptides: I4U96_RS13395_lassopeptideNZ_JTKS01000001.1 Lassopeptides: QI17_RS14045_lassopeptideNZ_JTKX01000023.1 Lassopeptides: QR19_RS15990_lassopeptideNZ_KB932331.1 Lassopeptides: Q9A_RS18260_lassopeptideNZ_KB944632.1 Lassopeptides: WMI_RS18340_lassopeptideNZ_KB944658.1 Lassopeptides: WMM_RS18400_lassopeptideNZ_KB944694.1 Lassopeptides: WO3_RS18855_lassopeptideNZ_KB944828.1 Lassopeptides: WOM_RS18345_lassopeptideNZ_KE351156.1 Lassopeptides: D924_RS19170_lassopeptideNZ_KE352620.1 Lassopeptides: D350_RS18085_lassopeptideNZ_NAQY01000001.1 Lassopeptides: B6A11_RS15210_lassopeptideNZ_SCHR01000003.1 Lassopeptides: EQ847_RS03410_lassopeptideNZ_SMGV01000009.1 Lassopeptides: EYY48_RS11015_lassopeptide

Lassopeptides: ENT_RS07390_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIEF

23

GLWTG FRDVFGGRA+ +V I +

1

GLWTGKFRDVFGGRALFQVVIYY

23

69.6% NZ_CP106992.1: Lassopeptides: NDS46_RS23370_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIEF

23

GLWTG F+D+FGGRA+ +KIEF

1

GLWTGKFKDLFGGRAV--IKIEF

21

65.2% NZ_BJED01000004.1: Lassopeptides: FFR60_RS05785_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIEF

23

GLWTG FRDVFGGRA+ ++ I +

1

GLWTGKFRDVFGGRALFQIVIYY

23

60.9% NZ_KI912489.1: Lassopeptides: allorf_514674_514802_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIEF

23

GLWTG + D+FGGRAI++++I F

1

GLWTGKWTDIFGGRAIIKIEIGF

23

56.5% NZ_AULE01000001.1: Lassopeptides: H509_RS27430_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIE

22

GLWTG + DVFGGRA++++ I+

1

GLWTGKYTDVFGGRALIKIIIQ

22

52.2% NZ_CP053549.1: Lassopeptides: HMI60_RS00570_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKI

21

G+W G +RD+FGGRA V+V +

1

GVWFGRWRDIFGGRAFVKVDV

21

52.2% NZ_FILX01000006.1and 2 others:

NZ_JAGFUY010000013.1 Lassopeptides: J5652_RS05355_lassopeptideNZ_JAGFVF010000023.1 Lassopeptides: J5568_RS09760_lassopeptide

Lassopeptides: A1363_RS11380_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKI

21

GL G+FRD+FGGRA+ ++I

1

GLVAGSFRDIFGGRALFLIRI

21

52.2% NZ_JADPFA010000001.1: Lassopeptides: I4U27_RS10200_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKI

21

GL G FRD+FGGRA+ ++I

1

GLVAGRFRDIFGGRALFLIRI

21

52.2% NZ_KI912489.1: Lassopeptides: allorf_514087_514215_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIEF

23

GL G + D+FGGRAI++++I F

1

GLCFGKWNDIFGGRAIIKIEIGF

23

52.2% NZ_NCVL01000001.1and 1 other:

NZ_VMMF01000036.1 Lassopeptides: HT717_RS09510_lassopeptide

Lassopeptides: B7694_RS10650_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKIEF

23

GLW G F D+FGGRA+ ++ I +

1

GLWFGKFTDIFGGRAVFQIVINY

23

47.8% NZ_JADKSM010000003.1and 2 others:

NZ_PSXX01000017.1 Lassopeptides: C5E05_RS18625_lassopeptideNZ_PSXZ01000003.1 Lassopeptides: C5E07_RS02640_lassopeptide

Lassopeptides: ITJ61_RS18070_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKI

21

G+W G +RD+FGGRA ++V +

1

GVWFGRWRDIFGGRAFIKVTV

21

47.8% NZ_JAMDLY010000010.1and 4 others:

NZ_JAPDMW010000034.1 Lassopeptides: OF778_RS29475_lassopeptideNZ_JMLT01000016.1 Lassopeptides: BP95_RS33025_lassopeptideNZ_LS992241.1 Lassopeptides: PBLR_RS07315_lassopeptideNZ_SADY01000011.1 Lassopeptides: C7Y44_RS26425_lassopeptide

Lassopeptides: M5X04_RS09885_lassopeptide

1

GLWTGNFRDVFGGRAIVRV

19

G+W G +RDV GGRA+ R+

1

GIWFGRYRDVLGGRALTRI

19

43.5% NZ_KI912489.1: Lassopeptides: allorf_513868_514041_lassopeptide

1

GLWTGNFRDVFGGRAIVRVK

20

G+W G + D+FGGRA + V+

1

GVWFGKWTDIFGGRAFIHVE

20

43.5% NZ_NGKY01000001.1: Lassopeptides: A5819_RS19010_lassopeptide

1

GLWTGNFRDVFGGRAIVRV

19

G+W G ++DVFGG+A + V

1

GVWFGRWKDVFGGKAFIAV

19

39.1% NZ_KI912489.1: Lassopeptides: allorf_513617_513742_lassopeptide

1

GLWTGNFRDVFGGRAIVRV

19

GLW G FRD+FG + +

1

GLWYGKFRDIFGAKTYFNL

19

39.1% NZ_LITU01000056.1: Lassopeptides: AMS66_RS32315_lassopeptide

1

GLWTGNFRDVFGGRAIVRVKI

21

G + G + DV+GG+A VR++

1

GFFAGKWTDVYGGKAFVRIEF

21

34.8% NZ_CP062951.1and 1 other:

NZ_CP071248.1 Lassopeptides: BLI009_RS05010_lassopeptide

Lassopeptides: BL1347_RS03935_lassopeptide

1

GLWTGNFRDVFGGRA

15

G+W GN+ DV G +A

1

GVWFGNYVDVGGAKA

15

34.8% NZ_KE951412.1: Lassopeptides: allorf_43700_43828_lassopeptide

1

GLWTGNFRDVFGGRAIVRV

19

G W G + D +GGR +R+

1

GGWRGRWNDYYGGRYGLRI

19

30.4% NZ_CP118615.1: Lassopeptides: PVK37_RS09555_lassopeptide

1

GLWTGNFRDVFGGRAIVRVK

20

L + + RD+FG RA++ +

1

SLGSADERDIFGYRALIVIH

20

26.1% NZ_JABBWU010000001.1: Lassopeptides: HHX30_RS02470_lassopeptide

6

NFRDVFGGRAIV

17

++RD+FGGR +

6

DYRDIFGGRTFI

17

21.7% NZ_FTNI01000001.1: Lassopeptides: allorf_119291_119425_lassopeptide

6

NFRDVFGGRAIV

17

++RD+FGG +

6

DYRDLFGGHTFI

17

20.7% NZ_KE384107.1and 1 other:

NZ_KE384107.1 Lanthipeptides: G586_RS0119020_lanthipeptide

Lanthipeptides: G586_RS0119020_lanthipeptide

3

WTGNFRDVFGGRAIVRVKI

21

W GN FG R + +

2

WYGNLEHFFGHRDLRYISC

20

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Lasso peptides

Core peptide predictions

ctg20_15 - Class II: Cleavage pHMM score: -8.10; RODEO score: 18; Monoisotopic mass: 2328.4 Da; Molecular weight: 2329.8 Da; Number of bridges: 0
ctg20_16 - Class II: Cleavage pHMM score: -8.80; RODEO score: 16; Monoisotopic mass: 2618.4 Da; Molecular weight: 2620.0 Da; Number of bridges: 0

gnlProkkaDCHGNEAJ_35 - Region 2 - RiPP-like

Download region GenBank file

Download region SVG

Location: 46,317 - 64,766 nt. (total: 18,450 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.