GCA_018783915.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKFKLDJKC_4 (original name was: gnl|Prokka|KFKLDJKC_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RaS-RiPP	222,648	245,072	streptide	RiPP	100%

gnlProkkaKFKLDJKC_17 (original name was: gnl|Prokka|KFKLDJKC_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	8,174	27,013

gnlProkkaKFKLDJKC_27 (original name was: gnl|Prokka|KFKLDJKC_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RiPP-like	23,209	35,305	quinolidomicin A	Polyketide	3%

gnlProkkaKFKLDJKC_58 (original name was: gnl|Prokka|KFKLDJKC_58)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	T3PKS	1	21,820

No secondary metabolite regions were found in these records:: gnlProkkaKFKLDJKC_5 (original name was: gnl|Prokka|KFKLDJKC_5); gnlProkkaKFKLDJKC_7 (original name was: gnl|Prokka|KFKLDJKC_7); gnlProkkaKFKLDJKC_9 (original name was: gnl|Prokka|KFKLDJKC_9); gnlProkkaKFKLDJKC_10 (original name was: gnl|Prokka|KFKLDJKC_10); gnlProkkaKFKLDJKC_11 (original name was: gnl|Prokka|KFKLDJKC_11); gnlProkkaKFKLDJKC_12 (original name was: gnl|Prokka|KFKLDJKC_12); gnlProkkaKFKLDJKC_14 (original name was: gnl|Prokka|KFKLDJKC_14); gnlProkkaKFKLDJKC_15 (original name was: gnl|Prokka|KFKLDJKC_15); gnlProkkaKFKLDJKC_16 (original name was: gnl|Prokka|KFKLDJKC_16); gnlProkkaKFKLDJKC_18 (original name was: gnl|Prokka|KFKLDJKC_18); gnlProkkaKFKLDJKC_20 (original name was: gnl|Prokka|KFKLDJKC_20); gnlProkkaKFKLDJKC_21 (original name was: gnl|Prokka|KFKLDJKC_21); gnlProkkaKFKLDJKC_22 (original name was: gnl|Prokka|KFKLDJKC_22); gnlProkkaKFKLDJKC_23 (original name was: gnl|Prokka|KFKLDJKC_23); gnlProkkaKFKLDJKC_24 (original name was: gnl|Prokka|KFKLDJKC_24); gnlProkkaKFKLDJKC_25 (original name was: gnl|Prokka|KFKLDJKC_25); gnlProkkaKFKLDJKC_26 (original name was: gnl|Prokka|KFKLDJKC_26); gnlProkkaKFKLDJKC_28 (original name was: gnl|Prokka|KFKLDJKC_28); gnlProkkaKFKLDJKC_29 (original name was: gnl|Prokka|KFKLDJKC_29); gnlProkkaKFKLDJKC_30 (original name was: gnl|Prokka|KFKLDJKC_30); gnlProkkaKFKLDJKC_35 (original name was: gnl|Prokka|KFKLDJKC_35); gnlProkkaKFKLDJKC_36 (original name was: gnl|Prokka|KFKLDJKC_36); gnlProkkaKFKLDJKC_37 (original name was: gnl|Prokka|KFKLDJKC_37); gnlProkkaKFKLDJKC_38 (original name was: gnl|Prokka|KFKLDJKC_38); gnlProkkaKFKLDJKC_39 (original name was: gnl|Prokka|KFKLDJKC_39); gnlProkkaKFKLDJKC_42 (original name was: gnl|Prokka|KFKLDJKC_42); gnlProkkaKFKLDJKC_45 (original name was: gnl|Prokka|KFKLDJKC_45); gnlProkkaKFKLDJKC_47 (original name was: gnl|Prokka|KFKLDJKC_47); gnlProkkaKFKLDJKC_48 (original name was: gnl|Prokka|KFKLDJKC_48); gnlProkkaKFKLDJKC_49 (original name was: gnl|Prokka|KFKLDJKC_49); gnlProkkaKFKLDJKC_50 (original name was: gnl|Prokka|KFKLDJKC_50); gnlProkkaKFKLDJKC_52 (original name was: gnl|Prokka|KFKLDJKC_52); gnlProkkaKFKLDJKC_54 (original name was: gnl|Prokka|KFKLDJKC_54); gnlProkkaKFKLDJKC_55 (original name was: gnl|Prokka|KFKLDJKC_55); gnlProkkaKFKLDJKC_57 (original name was: gnl|Prokka|KFKLDJKC_57); gnlProkkaKFKLDJKC_59 (original name was: gnl|Prokka|KFKLDJKC_59)

Compact view

gnlProkkaKFKLDJKC_4 - Region 1 - RaS-RiPP

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Location: 222,648 - 245,072 nt. (total: 22,425 nt) Show pHMM detection rules used

RaS-RiPP: (PF04055 and TIGR01716)

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core biosynthetic genes

additional biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaKFKLDJKC_17 - Region 1 - RiPP-like

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Location: 8,174 - 27,013 nt. (total: 18,840 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKFKLDJKC_27 - Region 1 - RiPP-like

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Location: 23,209 - 35,305 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaKFKLDJKC_58 - Region 1 - T3PKS

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Location: 1 - 21,820 nt. (total: 21,820 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.