Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_019041835.1	Bifidobacterium bifidum	MSK.8.16	SAMN19732209	-	USA:New York	Homo sapiens	0	2	0	0	2.00
2	GCA_019041375.1	Bifidobacterium bifidum	MSK.8.3	SAMN19732216	-	USA:New York	Homo sapiens	6	2	0	0	2.00
3	GCA_003094715.1	Bifidobacterium bifidum	DS32_23	SAMN08949005	2017-08-24	USA:MD	Homo sapiens	1138	2	0	0	2.00
4	GCA_001595435.1	Bifidobacterium bifidum	791	SAMN04155634	1993-04-23	Russia: Nizhny Novgorod	Homo sapiens	1139	2	0	0	2.00
5	GCA_002114145.1	Bifidobacterium bifidum	ICIS-310	SAMN05858649	2013-11-02	Russia: South Ural	Homo sapiens	1139	2	0	0	2.00
6	GCA_004799295.1	Bifidobacterium bifidum	ICIS-202	SAMN07709009	2016	Russia: Orenburg	Homo sapiens	1139	2	0	0	2.00
7	GCA_020710245.1	Bifidobacterium bifidum	ICIS-629	SAMN22555201	2016	Russia: Orenburg	Homo sapiens	1139	3	0	0	3.00
8	GCA_020861855.1	Bifidobacterium bifidum	ICIS-176	SAMN22746553	2016	Russia: Orenburg	Homo sapiens	1139	3	0	0	3.00
9	GCA_022014355.1	Bifidobacterium bifidum	791	SAMN06611220	2014	Russia: Orenburg	Homo sapiens	1139	2	0	0	2.00
10	GCA_003790385.1	Bifidobacterium bifidum	ICIS-643	SAMN06606988	2014	Russia: South Ural	Homo sapiens	1140	2	0	0	2.00
11	GCA_016070035.1	Bifidobacterium bifidum	VKPM Ac-1784	SAMN15880062	2019	Russia: Moscow	Homo sapiens	1140	2	0	0	2.00
12	GCA_045290295.1	Bifidobacterium bifidum	lw02	SAMN39525295	2017-10-12	China	Homo sapiens	1144	4	0	0	4.00
13	GCA_049192085.1	Bifidobacterium bifidum	IATA001	SAMN45053939	2022	Spain:Valencia	Homo sapiens	1145	2	0	0	2.00
14	GCA_001020275.1	Bifidobacterium bifidum	LMG 11582	SAMN03097403	-	-	Homo sapiens	1146	2	0	0	2.00
15	GCA_001020335.1	Bifidobacterium bifidum	LMG 11583	SAMN03097404	-	-	Homo sapiens	1146	2	0	0	2.00
16	GCA_003094735.1	Bifidobacterium bifidum	DS31_23	SAMN08949004	2018-03-12	USA:MD	Homo sapiens	1146	2	0	0	2.00
17	GCA_003436635.1	Bifidobacterium bifidum	TM02-17	SAMN09736965	2012-11-01	China: Shenzhen	Homo sapiens	1146	4	0	0	4.00
18	GCA_003436655.1	Bifidobacterium bifidum	TM02-15	SAMN09736964	2012-11-01	China: Shenzhen	Homo sapiens	1146	4	0	0	4.00
19	GCA_008868415.1	Bifidobacterium bifidum	BIO5480	SAMN12856545	-	-	Homo sapiens	1146	2	0	0	2.00
20	GCA_049192055.1	Bifidobacterium bifidum	IATA016	SAMN45053945	2022	Spain:Valencia	Homo sapiens	1146	2	0	0	2.00
21	GCA_000164965.1	Bifidobacterium bifidum S17	S17	SAMN02603395	-	-	-	1147	2	0	0	2.00
22	GCA_003094645.1	Bifidobacterium bifidum	DS33_23	SAMN08949006	2017-11-03	USA:MD	Homo sapiens	1147	2	0	0	2.00
23	GCA_003094755.1	Bifidobacterium bifidum	DS30_23	SAMN08949003	2018-01-11	USA:MD	Homo sapiens	1147	2	0	0	2.00
24	GCA_003094795.1	Bifidobacterium bifidum	DS25_23	SAMN08949001	2017-03-29	USA:MD	Homo sapiens	1147	2	0	0	2.00
25	GCA_003437175.1	Bifidobacterium bifidum	TF07-22	SAMN09736904	2013-08-01	China: Shenzhen	Homo sapiens	1147	4	0	0	4.00
26	GCA_003573895.1	Bifidobacterium bifidum	-	SAMD00078313	-	-	-	1147	2	0	0	2.00
27	GCA_020908005.1	Bifidobacterium bifidum	ICIS-504	SAMN22746550	2016	Russia: Orenburg	Homo sapiens	1147	2	0	0	2.00
28	GCA_028202595.1	Bifidobacterium bifidum	1001216st1_H2_BSD2780120875b_170604	SAMN31321329	2017-06-04	USA	Homo sapiens	1147	2	0	0	2.00
29	GCA_028202615.1	Bifidobacterium bifidum	1001216st1_B8_1028SCRN_200821	SAMN31321327	2020-08-21	USA	Homo sapiens	1147	2	0	0	2.00
30	GCA_028202785.1	Bifidobacterium bifidum	1001216st1_E8_1001216I_160404	SAMN31321328	2016-04-04	USA	Homo sapiens	1147	2	0	0	2.00
31	GCA_028202835.1	Bifidobacterium bifidum	1001216st1_H8_1001216I_160404	SAMN31321331	2016-04-04	USA	Homo sapiens	1147	2	0	0	2.00
32	GCA_029011515.1	Bifidobacterium bifidum	VSI20	SAMN33275447	2020-12-04	USA: Houston, TX	Homo sapiens	1147	2	0	0	2.00
33	GCA_029723435.1	Bifidobacterium bifidum	LH_1044	SAMN24838607	2017	United Kingdom	Homo sapiens	1147	2	0	0	2.00
34	GCA_029723555.1	Bifidobacterium bifidum	LH_1036	SAMN24838606	2017	United Kingdom	Homo sapiens	1147	2	0	0	2.00
35	GCA_029723565.1	Bifidobacterium bifidum	LH_1017	SAMN24838604	2017	United Kingdom	Homo sapiens	1147	2	0	0	2.00
36	GCA_029723595.1	Bifidobacterium bifidum	LH_1016	SAMN24838603	2017	United Kingdom	Homo sapiens	1147	2	0	0	2.00
37	GCA_029723675.1	Bifidobacterium bifidum	LH_1013	SAMN24838602	2017	United Kingdom	Homo sapiens	1147	2	0	0	2.00
38	GCA_029723695.1	Bifidobacterium bifidum	LH_986	SAMN24838598	2017	United Kingdom	Homo sapiens	1147	2	0	0	2.00
39	GCA_033959405.1	Bifidobacterium bifidum	BB11	SAMN38280574	1990-05-25	South Africa	Bos taurus	1147	2	0	0	2.00
40	GCA_034427835.1	Bifidobacterium bifidum	CCRC11847	SAMN38289445	1990-05-25	South Africa	Bos taurus	1147	2	0	0	2.00
41	GCA_001020245.1	Bifidobacterium bifidum	A8	SAMN03097401	-	-	Homo sapiens	1148	2	0	0	2.00
42	GCA_003095035.1	Bifidobacterium bifidum	DS26_23	SAMN08949002	2018-04-17	USA:MD	Homo sapiens	1148	2	0	0	2.00
43	GCA_024341745.1	Bifidobacterium bifidum JCM 1254	-	SAMD00422522	-	-	-	1148	1	0	0	1.00
44	GCA_003390735.1	Bifidobacterium bifidum	S6	SAMN07484235	2017-04-04	South Korea: Bundang	Homo sapiens	1149	2	0	0	2.00
45	GCA_003470585.1	Bifidobacterium bifidum	AM18-29	SAMN09734868	2013-09-01	China: Shenzhen	Homo sapiens	1149	2	0	0	2.00
46	GCA_003470615.1	Bifidobacterium bifidum	AM18-12AC	SAMN09734861	2013-10-01	China: Shenzhen	Homo sapiens	1149	3	0	0	3.00
47	GCA_003471555.1	Bifidobacterium bifidum	AM18-11	SAMN09734860	2013-09-01	China: Shenzhen	Homo sapiens	1149	3	0	0	3.00
48	GCA_003471595.1	Bifidobacterium bifidum	AM18-1	SAMN09734857	2013-09-01	China: Shenzhen	Homo sapiens	1149	2	0	0	2.00
49	GCA_049192095.1	Bifidobacterium bifidum	IATA005	SAMN45053941	2022	Spain:Valencia	Homo sapiens	1149	2	0	0	2.00
50	GCA_003437325.1	Bifidobacterium bifidum	TF06-14AC	SAMN09736890	2013-08-01	China: Shenzhen	Homo sapiens	1150	3	0	0	3.00
51	GCA_003437345.1	Bifidobacterium bifidum	TF06-13	SAMN09736889	2013-08-01	China: Shenzhen	Homo sapiens	1150	3	0	0	3.00
52	GCA_003465425.1	Bifidobacterium bifidum	AF11-25B	SAMN09734209	2013-10-01	China: Shenzhen	Homo sapiens	1150	4	0	0	4.00
53	GCA_016069985.1	Bifidobacterium bifidum	VKPM Ac-1579	SAMN15880060	2019	Russia: Moscow	Homo sapiens	1150	2	0	0	2.00
54	GCA_022133625.1	Bifidobacterium bifidum	DFI.7.59	SAMN24726072	-	USA:Chicago	Homo sapiens	1150	2	0	0	2.00
55	GCA_022134905.2	Bifidobacterium bifidum	DFI.7.51	SAMN24726067	-	USA:Chicago	Homo sapiens	1150	2	0	0	2.00
56	GCA_026076095.1	Bifidobacterium bifidum	P671	SAMN31654352	2018	Spain	Homo sapiens	1150	4	0	0	4.00
57	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	2020-08-14	USA	Homo sapiens	1150	2	0	0	2.00
58	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	2020-08-14	USA	Homo sapiens	1150	2	0	0	2.00
59	GCA_003467985.1	Bifidobacterium bifidum	AM42-15AC	SAMN09736543	2014-01-01	China: Shenzhen	Homo sapiens	1151	4	0	0	4.00
60	GCA_039913175.1	Bifidobacterium bifidum	RTP21221st1_A9_RTP21221_200709	SAMN31321405	2020-07-09	USA	Homo sapiens	1151	2	0	0	2.00
61	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	-	-	Homo sapiens	1152	4	0	0	4.00
62	GCA_001020255.1	Bifidobacterium bifidum	156B	SAMN03097399	-	-	Homo sapiens	1152	2	0	0	2.00
63	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	-	-	Homo sapiens	1152	4	0	0	4.00
64	GCA_003472345.1	Bifidobacterium bifidum	AM12-10	SAMN09734784	2013-08-01	China: Shenzhen	Homo sapiens	1152	4	0	0	4.00
65	GCA_003473145.1	Bifidobacterium bifidum	AM12-9	SAMN09734792	2013-08-01	China: Shenzhen	Homo sapiens	1152	4	0	0	4.00
66	GCA_028203535.1	Bifidobacterium bifidum	RTP21221st1_G2_RTP21221_200709	SAMN31321406	2020-07-09	USA	Homo sapiens	1152	1	0	0	1.00
67	GCA_001281345.1	Bifidobacterium bifidum	BF3	SAMN03271680	2001-10-25	Korea	Homo sapiens	1153	3	0	0	3.00
68	GCA_003437945.1	Bifidobacterium bifidum	TF05-1	SAMN09736871	2013-08-01	China: Shenzhen	Homo sapiens	1153	3	0	0	3.00
69	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	2013-08-01	China: Shenzhen	Homo sapiens	1153	4	0	0	4.00
70	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	2013-08-01	China: Shenzhen	Homo sapiens	1153	4	0	0	4.00
71	GCA_003468415.1	Bifidobacterium bifidum	AM36-1AC	SAMN09736479	2013-12-01	China: Shenzhen	Homo sapiens	1153	2	0	0	2.00
72	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
73	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
74	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
75	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	2016-11-14	USA	Homo sapiens	1153	2	0	0	2.00
76	GCA_028202155.1	Bifidobacterium bifidum	1001283st1_G4_1001283B150217_161031	SAMN31321346	2016-10-31	USA	Homo sapiens	1153	2	0	0	2.00
77	GCA_028202165.1	Bifidobacterium bifidum	1001283st1_F3_1001283B150210_160208	SAMN31321344	2016-02-08	USA	Homo sapiens	1153	2	0	0	2.00
78	GCA_028202215.1	Bifidobacterium bifidum	1001283st1_F5_1001283B150209_150212	SAMN31321345	2015-02-12	USA	Homo sapiens	1153	2	0	0	2.00
79	GCA_028202295.1	Bifidobacterium bifidum	1001283st1_C1_1001283B150225_161107	SAMN31321338	2016-11-07	USA	Homo sapiens	1153	2	0	0	2.00
80	GCA_028202335.1	Bifidobacterium bifidum	1001283st1_A1_1001285H_161024	SAMN31321336	2016-10-24	USA	Homo sapiens	1153	3	0	0	3.00
81	GCA_028202355.1	Bifidobacterium bifidum	1001283st1_E8_1001285I_161205	SAMN31321342	2016-12-05	USA	Homo sapiens	1153	3	0	0	3.00
82	GCA_028202365.1	Bifidobacterium bifidum	1001283st1_B11_1001285I_161205	SAMN31321337	2016-12-05	USA	Homo sapiens	1153	3	0	0	3.00
83	GCA_028202555.1	Bifidobacterium bifidum	B6_h1001283B150217_200217	SAMN31321373	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
84	GCA_028202575.1	Bifidobacterium bifidum	1001283st1_E8_1001283B150210_160208	SAMN31321341	2016-02-08	USA	Homo sapiens	1153	2	0	0	2.00
85	GCA_028202605.1	Bifidobacterium bifidum	1001283st1_D6_1001283B150209_150212	SAMN31321340	2015-02-12	USA	Homo sapiens	1153	2	0	0	2.00
86	GCA_028202675.1	Bifidobacterium bifidum	1001271st1_H11_1001271B_150615	SAMN31321335	2015-06-15	USA	Homo sapiens	1153	3	0	0	3.00
87	GCA_028202725.1	Bifidobacterium bifidum	1001283st1_C8_1001283B150304_161114	SAMN31321339	2016-11-14	USA	Homo sapiens	1153	2	0	0	2.00
88	GCA_028202735.1	Bifidobacterium bifidum	1001271st1_F2_1001271B_151109	SAMN31321333	2015-11-09	USA	Homo sapiens	1153	3	0	0	3.00
89	GCA_028202815.1	Bifidobacterium bifidum	1001271st1_A6_1001270H_150608	SAMN31321332	2015-06-08	USA	Homo sapiens	1153	3	0	0	3.00
90	GCA_028203615.1	Bifidobacterium bifidum	A12_h1001283B150217_200217	SAMN31321372	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
91	GCA_028203705.1	Bifidobacterium bifidum	G10_h1001283B150217_200217	SAMN31321380	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
92	GCA_028203735.1	Bifidobacterium bifidum	F6_h1001283B150217_200217	SAMN31321377	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
93	GCA_028203745.1	Bifidobacterium bifidum	G8_h1001283B150217_200217	SAMN31321379	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
94	GCA_028203775.1	Bifidobacterium bifidum	F11_h1001283B150217_200217	SAMN31321378	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
95	GCA_028203795.1	Bifidobacterium bifidum	C4_h1001283B150217_200217	SAMN31321375	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
96	GCA_028203815.1	Bifidobacterium bifidum	F5_h1001283B150217_200217	SAMN31321376	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
97	GCA_028203835.1	Bifidobacterium bifidum	D53st1_B4_D53t1_180928	SAMN31321366	2018-09-28	USA	Homo sapiens	1153	2	0	0	2.00
98	GCA_028203855.1	Bifidobacterium bifidum	D53st1_A12_D53t1_180928	SAMN31321365	2018-09-28	USA	Homo sapiens	1153	2	0	0	2.00
99	GCA_028203875.1	Bifidobacterium bifidum	H3_h1001283B150217_200217	SAMN31321371	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00
100	GCA_028203895.1	Bifidobacterium bifidum	H2_h1001283B150217_200217	SAMN31321370	2020-02-17	USA	Homo sapiens	1153	2	0	0	2.00