GCA_019061285.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBCAPEMIB_1 (original name was: gnl|Prokka|BCAPEMIB_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	ranthipeptide	125,200	146,865

gnlProkkaBCAPEMIB_41 (original name was: gnl|Prokka|BCAPEMIB_41)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	cyclic-lactone-autoinducer	9,013	30,491

gnlProkkaBCAPEMIB_142 (original name was: gnl|Prokka|BCAPEMIB_142)

Region	Type	From	To	Most similar known cluster		Similarity
Region 74.1	lassopeptide	1	1,281

Region	Type	From	To	Similarity
Region 1.1	ranthipeptide	125,200	146,865
Region 12.1	cyclic-lactone-autoinducer	9,013	30,491
Region 74.1	lassopeptide	1	1,281

No secondary metabolite regions were found in these records:: gnlProkkaBCAPEMIB_2 (original name was: gnl|Prokka|BCAPEMIB_2); gnlProkkaBCAPEMIB_4 (original name was: gnl|Prokka|BCAPEMIB_4); gnlProkkaBCAPEMIB_7 (original name was: gnl|Prokka|BCAPEMIB_7); gnlProkkaBCAPEMIB_12 (original name was: gnl|Prokka|BCAPEMIB_12); gnlProkkaBCAPEMIB_16 (original name was: gnl|Prokka|BCAPEMIB_16); gnlProkkaBCAPEMIB_20 (original name was: gnl|Prokka|BCAPEMIB_20); gnlProkkaBCAPEMIB_25 (original name was: gnl|Prokka|BCAPEMIB_25); gnlProkkaBCAPEMIB_31 (original name was: gnl|Prokka|BCAPEMIB_31); gnlProkkaBCAPEMIB_35 (original name was: gnl|Prokka|BCAPEMIB_35); gnlProkkaBCAPEMIB_39 (original name was: gnl|Prokka|BCAPEMIB_39); gnlProkkaBCAPEMIB_45 (original name was: gnl|Prokka|BCAPEMIB_45); gnlProkkaBCAPEMIB_48 (original name was: gnl|Prokka|BCAPEMIB_48); gnlProkkaBCAPEMIB_49 (original name was: gnl|Prokka|BCAPEMIB_49); gnlProkkaBCAPEMIB_51 (original name was: gnl|Prokka|BCAPEMIB_51); gnlProkkaBCAPEMIB_54 (original name was: gnl|Prokka|BCAPEMIB_54); gnlProkkaBCAPEMIB_56 (original name was: gnl|Prokka|BCAPEMIB_56); gnlProkkaBCAPEMIB_58 (original name was: gnl|Prokka|BCAPEMIB_58); gnlProkkaBCAPEMIB_60 (original name was: gnl|Prokka|BCAPEMIB_60); gnlProkkaBCAPEMIB_64 (original name was: gnl|Prokka|BCAPEMIB_64); gnlProkkaBCAPEMIB_68 (original name was: gnl|Prokka|BCAPEMIB_68); gnlProkkaBCAPEMIB_74 (original name was: gnl|Prokka|BCAPEMIB_74); gnlProkkaBCAPEMIB_76 (original name was: gnl|Prokka|BCAPEMIB_76); gnlProkkaBCAPEMIB_77 (original name was: gnl|Prokka|BCAPEMIB_77); gnlProkkaBCAPEMIB_78 (original name was: gnl|Prokka|BCAPEMIB_78); gnlProkkaBCAPEMIB_79 (original name was: gnl|Prokka|BCAPEMIB_79); gnlProkkaBCAPEMIB_80 (original name was: gnl|Prokka|BCAPEMIB_80); gnlProkkaBCAPEMIB_82 (original name was: gnl|Prokka|BCAPEMIB_82); gnlProkkaBCAPEMIB_84 (original name was: gnl|Prokka|BCAPEMIB_84); gnlProkkaBCAPEMIB_85 (original name was: gnl|Prokka|BCAPEMIB_85); gnlProkkaBCAPEMIB_86 (original name was: gnl|Prokka|BCAPEMIB_86); gnlProkkaBCAPEMIB_87 (original name was: gnl|Prokka|BCAPEMIB_87); gnlProkkaBCAPEMIB_89 (original name was: gnl|Prokka|BCAPEMIB_89); gnlProkkaBCAPEMIB_91 (original name was: gnl|Prokka|BCAPEMIB_91); gnlProkkaBCAPEMIB_92 (original name was: gnl|Prokka|BCAPEMIB_92); gnlProkkaBCAPEMIB_94 (original name was: gnl|Prokka|BCAPEMIB_94); gnlProkkaBCAPEMIB_95 (original name was: gnl|Prokka|BCAPEMIB_95); gnlProkkaBCAPEMIB_96 (original name was: gnl|Prokka|BCAPEMIB_96); gnlProkkaBCAPEMIB_98 (original name was: gnl|Prokka|BCAPEMIB_98); gnlProkkaBCAPEMIB_100 (original name was: gnl|Prokka|BCAPEMIB_100); gnlProkkaBCAPEMIB_101 (original name was: gnl|Prokka|BCAPEMIB_101); gnlProkkaBCAPEMIB_103 (original name was: gnl|Prokka|BCAPEMIB_103); gnlProkkaBCAPEMIB_104 (original name was: gnl|Prokka|BCAPEMIB_104); gnlProkkaBCAPEMIB_105 (original name was: gnl|Prokka|BCAPEMIB_105); gnlProkkaBCAPEMIB_106 (original name was: gnl|Prokka|BCAPEMIB_106); gnlProkkaBCAPEMIB_107 (original name was: gnl|Prokka|BCAPEMIB_107); gnlProkkaBCAPEMIB_108 (original name was: gnl|Prokka|BCAPEMIB_108); gnlProkkaBCAPEMIB_109 (original name was: gnl|Prokka|BCAPEMIB_109); gnlProkkaBCAPEMIB_110 (original name was: gnl|Prokka|BCAPEMIB_110); gnlProkkaBCAPEMIB_111 (original name was: gnl|Prokka|BCAPEMIB_111); gnlProkkaBCAPEMIB_112 (original name was: gnl|Prokka|BCAPEMIB_112); gnlProkkaBCAPEMIB_113 (original name was: gnl|Prokka|BCAPEMIB_113); gnlProkkaBCAPEMIB_114 (original name was: gnl|Prokka|BCAPEMIB_114); gnlProkkaBCAPEMIB_116 (original name was: gnl|Prokka|BCAPEMIB_116); gnlProkkaBCAPEMIB_117 (original name was: gnl|Prokka|BCAPEMIB_117); gnlProkkaBCAPEMIB_118 (original name was: gnl|Prokka|BCAPEMIB_118); gnlProkkaBCAPEMIB_119 (original name was: gnl|Prokka|BCAPEMIB_119); gnlProkkaBCAPEMIB_120 (original name was: gnl|Prokka|BCAPEMIB_120); gnlProkkaBCAPEMIB_122 (original name was: gnl|Prokka|BCAPEMIB_122); gnlProkkaBCAPEMIB_123 (original name was: gnl|Prokka|BCAPEMIB_123); gnlProkkaBCAPEMIB_124 (original name was: gnl|Prokka|BCAPEMIB_124); gnlProkkaBCAPEMIB_125 (original name was: gnl|Prokka|BCAPEMIB_125); gnlProkkaBCAPEMIB_126 (original name was: gnl|Prokka|BCAPEMIB_126); gnlProkkaBCAPEMIB_127 (original name was: gnl|Prokka|BCAPEMIB_127); gnlProkkaBCAPEMIB_128 (original name was: gnl|Prokka|BCAPEMIB_128); gnlProkkaBCAPEMIB_129 (original name was: gnl|Prokka|BCAPEMIB_129); gnlProkkaBCAPEMIB_130 (original name was: gnl|Prokka|BCAPEMIB_130); gnlProkkaBCAPEMIB_134 (original name was: gnl|Prokka|BCAPEMIB_134); gnlProkkaBCAPEMIB_135 (original name was: gnl|Prokka|BCAPEMIB_135); gnlProkkaBCAPEMIB_136 (original name was: gnl|Prokka|BCAPEMIB_136); gnlProkkaBCAPEMIB_137 (original name was: gnl|Prokka|BCAPEMIB_137); gnlProkkaBCAPEMIB_140 (original name was: gnl|Prokka|BCAPEMIB_140); gnlProkkaBCAPEMIB_143 (original name was: gnl|Prokka|BCAPEMIB_143); gnlProkkaBCAPEMIB_144 (original name was: gnl|Prokka|BCAPEMIB_144); gnlProkkaBCAPEMIB_145 (original name was: gnl|Prokka|BCAPEMIB_145)

Compact view

gnlProkkaBCAPEMIB_1 - Region 1 - ranthipeptide

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Location: 125,200 - 146,865 nt. (total: 21,666 nt) Show pHMM detection rules used

ranthipeptide: (TIGR03973 or SCIFF or (cds(PF04055 and (TIGR04085 or SPASM)) and minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE]) and not (TIGR01716 or subtilosin or TIGR02111 or TIGR03966 or TIGR04103 or (YcaO or TIGR03604))))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBCAPEMIB_41 - Region 1 - cyclic-lactone-autoinducer

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Location: 9,013 - 30,491 nt. (total: 21,479 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBCAPEMIB_142 - Region 1 - lassopeptide

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Location: 1 - 1,281 nt. (total: 1,281 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lasso peptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.