Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_019126195.1	Bifidobacterium breve	MSK.22.64	SAMN19732144	-	USA:New York	Homo sapiens	0	1	0	0	1.00
2	GCA_019126115.1	Bifidobacterium breve	MSK.22.99	SAMN19732149	-	USA:New York	Homo sapiens	1	1	0	0	1.00
3	GCA_019126415.1	Bifidobacterium breve	MSK.22.68	SAMN19732147	-	USA:New York	Homo sapiens	1	1	0	0	1.00
4	GCA_019126945.1	Bifidobacterium breve	MSK.22.103	SAMN19732100	-	USA:New York	Homo sapiens	1	1	0	0	1.00
5	GCA_019126535.1	Bifidobacterium breve	MSK.22.20	SAMN19732127	-	USA:New York	Homo sapiens	2	1	0	0	1.00
6	GCA_019126575.1	Bifidobacterium breve	MSK.22.118	SAMN19732115	-	USA:New York	Homo sapiens	2	1	0	0	1.00
7	GCA_019126695.1	Bifidobacterium breve	MSK.22.116	SAMN19732113	-	USA:New York	Homo sapiens	2	1	0	0	1.00
8	GCA_019126815.1	Bifidobacterium breve	MSK.22.111	SAMN19732108	-	USA:New York	Homo sapiens	2	1	0	0	1.00
9	GCA_019126935.1	Bifidobacterium breve	MSK.22.104	SAMN19732101	-	USA:New York	Homo sapiens	2	1	0	0	1.00
10	GCA_019126215.1	Bifidobacterium breve	MSK.22.124	SAMN19732116	-	USA:New York	Homo sapiens	3	1	0	0	1.00
11	GCA_019126325.1	Bifidobacterium breve	MSK.22.97	SAMN19732148	-	USA:New York	Homo sapiens	3	1	0	0	1.00
12	GCA_019126615.1	Bifidobacterium breve	MSK.22.117	SAMN19732114	-	USA:New York	Homo sapiens	3	1	0	0	1.00
13	GCA_019126975.1	Bifidobacterium breve	MSK.22.115	SAMN19732112	-	USA:New York	Homo sapiens	3	1	0	0	1.00
14	GCA_019125915.1	Bifidobacterium breve	MSK.22.45	SAMN19732137	-	USA:New York	Homo sapiens	4	1	0	0	1.00
15	GCA_019126155.1	Bifidobacterium breve	MSK.22.65	SAMN19732145	-	USA:New York	Homo sapiens	4	1	0	0	1.00
16	GCA_019126515.1	Bifidobacterium breve	MSK.22.2	SAMN19732126	-	USA:New York	Homo sapiens	4	1	0	0	1.00
17	GCA_019126565.1	Bifidobacterium breve	MSK.22.107	SAMN19732104	-	USA:New York	Homo sapiens	4	1	0	0	1.00
18	GCA_019126635.1	Bifidobacterium breve	MSK.22.114	SAMN19732111	-	USA:New York	Homo sapiens	4	1	0	0	1.00
19	GCA_019126735.1	Bifidobacterium breve	MSK.22.100	SAMN19732097	-	USA:New York	Homo sapiens	4	1	0	0	1.00
20	GCA_019126775.1	Bifidobacterium breve	MSK.22.105	SAMN19732102	-	USA:New York	Homo sapiens	4	1	0	0	1.00
21	GCA_019126785.1	Bifidobacterium breve	MSK.22.106	SAMN19732103	-	USA:New York	Homo sapiens	4	1	0	0	1.00
22	GCA_019126855.1	Bifidobacterium breve	MSK.22.11	SAMN19732107	-	USA:New York	Homo sapiens	4	1	0	0	1.00
23	GCA_019126995.1	Bifidobacterium breve	MSK.22.102	SAMN19732099	-	USA:New York	Homo sapiens	4	1	0	0	1.00
24	GCA_019052255.1	Bifidobacterium breve	MSK.22.113	SAMN19732110	-	USA:New York	Homo sapiens	5	1	0	0	1.00
25	GCA_019126315.1	Bifidobacterium breve	MSK.22.57	SAMN19732143	-	USA:New York	Homo sapiens	5	1	0	0	1.00
26	GCA_019126835.1	Bifidobacterium breve	MSK.22.101	SAMN19732098	-	USA:New York	Homo sapiens	5	1	0	0	1.00
27	GCA_019126875.1	Bifidobacterium breve	MSK.22.108	SAMN19732105	-	USA:New York	Homo sapiens	5	1	0	0	1.00
28	GCA_020538815.1	Bifidobacterium breve	MSK.23.124	SAMN22165246	-	USA:New York	Homo sapiens	5	1	0	0	1.00
29	GCA_020538845.1	Bifidobacterium breve	MSK.23.105	SAMN22165240	-	USA:New York	Homo sapiens	5	1	0	0	1.00
30	GCA_019126915.1	Bifidobacterium breve	MSK.22.109	SAMN19732106	-	USA:New York	Homo sapiens	6	1	0	0	1.00
31	GCA_020538645.1	Bifidobacterium breve	MSK.23.133	SAMN22165254	-	USA:New York	Homo sapiens	6	1	0	0	1.00
32	GCA_019125975.1	Bifidobacterium breve	MSK.22.4	SAMN19732135	-	USA:New York	Homo sapiens	7	1	0	0	1.00
33	GCA_020538485.1	Bifidobacterium breve	MSK.23.143	SAMN22165262	-	USA:New York	Homo sapiens	7	1	0	0	1.00
34	GCA_020538685.1	Bifidobacterium breve	MSK.23.130	SAMN22165252	-	USA:New York	Homo sapiens	7	1	0	0	1.00
35	GCA_020539105.1	Bifidobacterium breve	MSK.22.71	SAMN22165221	-	USA:New York	Homo sapiens	7	1	0	0	1.00
36	GCA_020539185.1	Bifidobacterium breve	MSK.22.73	SAMN22165222	-	USA:New York	Homo sapiens	7	1	0	0	1.00
37	GCA_020733045.1	Bifidobacterium breve	MSK.23.141	SAMN22165260	-	USA:New York	Homo sapiens	7	1	0	0	1.00
38	GCA_019126245.1	Bifidobacterium breve	MSK.22.34	SAMN19732133	-	USA:New York	Homo sapiens	8	1	0	0	1.00
39	GCA_020538545.1	Bifidobacterium breve	MSK.23.144	SAMN22165263	-	USA:New York	Homo sapiens	8	1	0	0	1.00
40	GCA_020539085.1	Bifidobacterium breve	MSK.22.80	SAMN22165226	-	USA:New York	Homo sapiens	8	1	0	0	1.00
41	GCA_020539025.1	Bifidobacterium breve	MSK.22.82	SAMN22165228	-	USA:New York	Homo sapiens	9	1	0	0	1.00
42	GCA_033804565.1	Bifidobacterium breve	FZJHZD20M12	SAMN13258906	2017-05-30	China:Zhejiang	Homo sapiens	1100	3	0	0	3.00
43	GCA_036763915.1	Bifidobacterium breve	FZJHZ7M2	SAMN13258904	2017-04-25	China:Zhejiang	-	1113	3	0	0	3.00
44	GCA_033804505.1	Bifidobacterium breve	FHuNMY8M2	SAMN20502688	2017-06-03	China:Mayang	Homo sapiens	1120	1	0	0	1.00
45	GCA_003860285.1	Bifidobacterium breve	lw01	SAMN10484345	2017-10-10	China	Homo sapiens	1126	2	0	0	2.00
46	GCA_033804525.1	Bifidobacterium breve	FAHWH21M7	SAMN13258908	2017-09-01	China:Anhui	Homo sapiens	1134	1	0	0	1.00
47	GCA_035544755.1	Bifidobacterium breve	FFHNXY43M2	SAMN13258929	2017-06-03	China:Henan	Homo sapiens	1138	3	0	0	3.00
48	GCA_000569015.1	Bifidobacterium breve JCM 7019	JCM 7019	SAMN03081480	-	-	-	1149	2	0	0	2.00
49	GCA_001263935.1	Bifidobacterium breve MCC 1605	MCC 1605	SAMN03978805	-	Japan	Homo sapiens	1154	2	0	0	2.00
50	GCA_001264105.1	Bifidobacterium breve MCC 1340	MCC 1340	SAMN03978803	-	Japan	Homo sapiens	1174	3	0	0	3.00
51	GCA_001281425.1	Bifidobacterium breve	BR3	SAMN03271681	2001-08-13	Korea	Homo sapiens	1175	3	0	0	3.00
52	GCA_002076055.1	Bifidobacterium breve	1891B	SAMN06621711	-	Italy	Homo sapiens	1175	4	0	0	4.00
53	GCA_016648955.1	Bifidobacterium breve	PRL2020	SAMN16287677	2018	Italy	Homo sapiens	1175	4	0	0	4.00
54	GCA_016648985.1	Bifidobacterium breve	M1D	SAMN16287678	2019	Italy	Homo sapiens	1175	4	0	0	4.00
55	GCA_049205255.1	Bifidobacterium breve	IATA084	SAMN45053963	2022	Spain:Valencia	Homo sapiens	1175	1	0	0	1.00
56	GCA_001263915.1	Bifidobacterium breve MCC 1128	MCC 1128	SAMN03978799	-	Japan	Homo sapiens	1176	1	0	0	1.00
57	GCA_001264155.1	Bifidobacterium breve MCC 1604	MCC 1604	SAMN03978800	-	Japan	Homo sapiens	1180	2	0	0	2.00
58	GCA_036872545.1	Bifidobacterium breve	TCI761	SAMN39949153	2020-05-14	Taiwan	Homo sapiens	1180	2	0	0	2.00
59	GCA_047301025.1	Bifidobacterium breve	JKL2022	SAMN30403323	2008-02-22	South Korea: Anseong City	-	1180	2	0	0	2.00
60	GCA_049191465.1	Bifidobacterium breve	IATA048	SAMN45053954	2022	Spain:Valencia	Homo sapiens	1180	4	0	0	4.00
61	GCA_049205315.1	Bifidobacterium breve	IATA077	SAMN45053959	2022	Spain:Valencia	Homo sapiens	1180	4	0	0	4.00
62	GCA_000568975.1	Bifidobacterium breve JCM 7017	JCM 7017	SAMN03081479	-	-	-	1183	1	0	0	1.00
63	GCA_001264135.1	Bifidobacterium breve MCC 1454	MCC 1454	SAMN03978804	-	Japan	Homo sapiens	1184	1	0	0	1.00
64	GCA_001263845.1	Bifidobacterium breve MCC 0476	MCC 0476	SAMN03978797	-	Japan	Homo sapiens	1185	2	0	0	2.00
65	GCA_001263855.1	Bifidobacterium breve MCC 1114	MCC 1114	SAMN03978798	-	Japan	Homo sapiens	1185	1	0	0	1.00
66	GCA_030414125.1	Bifidobacterium breve	Bif11	SAMN08966057	2015	India:Chandigarh	Homo sapiens	1185	3	0	0	3.00
67	GCA_003370195.1	Bifidobacterium breve	30-1	SAMN07189837	2012	Canada: Toronto	Homo sapiens	1187	1	0	0	1.00
68	GCA_902651995.1	Bifidobacterium breve	-	SAMEA6160251	-	-	-	1187	2	0	0	2.00
69	GCA_001990225.1	Bifidobacterium breve	LMC520	SAMN06240351	1900-01-01	-	-	1188	2	0	0	2.00
70	GCA_002838305.1	Bifidobacterium breve	NRBB11	SAMN06827081	2014-10-01	Netherlands	Homo sapiens	1189	1	0	0	1.00
71	GCA_002838325.1	Bifidobacterium breve	NRBB09	SAMN06827067	2014-10-01	Netherlands	Homo sapiens	1189	1	0	0	1.00
72	GCA_002861455.1	Bifidobacterium breve	UMB0915	SAMN08193648	2015	USA: Maywood, IL	Homo sapiens	1190	3	0	0	3.00
73	GCA_002871815.1	Bifidobacterium breve	UMB0089	SAMN07511392	2015	USA: Maywood, IL	Homo sapiens	1190	3	0	0	3.00
74	GCA_027215075.1	Bifidobacterium breve	SDS-1440-OWr	SAMN32244236	2019-07-05	Canada: Vancouver	Homo sapiens	1191	3	0	0	3.00
75	GCA_027215185.1	Bifidobacterium breve	SDS-1439-RL	SAMN32244255	2019-06-21	Canada: Vancouver	Homo sapiens	1191	3	0	0	3.00
76	GCA_027215315.1	Bifidobacterium breve	SDS-1441-OWr	SAMN32244253	2019-09-20	Canada: Vancouver	Homo sapiens	1191	3	0	0	3.00
77	GCA_028201775.1	Bifidobacterium breve	J1101312st1_E4_J1101312_190322	SAMN31321433	2019-03-22	USA	Homo sapiens	1191	1	0	0	1.00
78	GCA_028203415.1	Bifidobacterium breve	J1101312st1_H6_J1101312_190322	SAMN31321434	2019-03-22	USA	Homo sapiens	1191	1	0	0	1.00
79	GCA_001264035.1	Bifidobacterium breve MCC 0305	MCC 0305	SAMN03978801	-	Japan	Homo sapiens	1194	2	0	0	2.00
80	GCA_001264045.1	Bifidobacterium breve MCC 0121	MCC 0121	SAMN03978796	-	Japan	Homo sapiens	1194	2	0	0	2.00
81	GCA_001264095.1	Bifidobacterium breve MCC 1094	MCC 1094	SAMN03978802	-	Japan	Homo sapiens	1194	2	0	0	2.00
82	GCA_002076075.1	Bifidobacterium breve	1889B	SAMN06621709	-	Italy	Homo sapiens	1194	1	0	0	1.00
83	GCA_002838385.1	Bifidobacterium breve	NRBB52	SAMN06827097	2014-10-01	Netherlands	Homo sapiens	1194	1	0	0	1.00
84	GCA_028203455.1	Bifidobacterium breve	1001254st1_D4_1001254J_160919	SAMN31321418	2016-09-19	USA	Homo sapiens	1195	3	0	0	3.00
85	GCA_028203465.1	Bifidobacterium breve	1001254st1_B10_1001254J_160919	SAMN31321417	2016-09-19	USA	Homo sapiens	1195	3	0	0	3.00
86	GCA_901980275.1	Bifidobacterium breve	INIA P734	SAMEA5675151	2008	Spain	Homo sapiens	1196	1	0	0	1.00
87	GCA_000158015.1	Bifidobacterium breve DSM 20213 = JCM 1192	DSM 20213	SAMN00008778	-	-	Homo sapiens	1197	2	0	0	2.00
88	GCA_000569075.1	Bifidobacterium breve S27	S27	SAMN03081483	-	-	-	1197	1	0	0	1.00
89	GCA_001025175.1	Bifidobacterium breve DSM 20213 = JCM 1192	-	SAMD00061041	-	-	-	1197	1	0	0	1.00
90	GCA_002075865.1	Bifidobacterium breve	1900B	SAMN06621718	-	Italy	Homo sapiens	1197	2	0	0	2.00
91	GCA_002838245.1	Bifidobacterium breve	NRBB01	SAMN06827008	2014-10-01	Netherlands	Homo sapiens	1197	1	0	0	1.00
92	GCA_002838485.1	Bifidobacterium breve	215W447a	SAMN06829004	2014-10-01	Ireland	Homo sapiens	1197	1	0	0	1.00
93	GCA_003095095.1	Bifidobacterium breve	DS15_17	SAMN06464121	2016-09-14	USA:MD	Homo sapiens	1197	1	0	0	1.00
94	GCA_003813065.1	Bifidobacterium breve	FDAARGOS_561	SAMN10163185	1963	-	Homo sapiens	1197	1	0	0	1.00
95	GCA_008868405.1	Bifidobacterium breve	BIO6018	SAMN12856546	-	-	Homo sapiens	1197	1	0	0	1.00
96	GCA_030876985.1	Bifidobacterium breve	B6	SAMN34082179	-	-	Homo sapiens	1197	1	0	0	1.00
97	GCA_900637145.1	Bifidobacterium breve	NCTC11815	SAMEA4076721	1900/1985	-	Human (Infant)	1197	1	0	0	1.00
98	GCA_000213865.1	Bifidobacterium breve ACS-071-V-Sch8b	ACS-071-V-Sch8b	SAMN00100758	-	-	Homo sapiens	1198	2	0	0	2.00
99	GCA_002838405.1	Bifidobacterium breve	NRBB51	SAMN06827096	2014-10-01	Netherlands	Homo sapiens	1198	4	0	0	4.00
100	GCA_029723715.1	Bifidobacterium breve	LH_989	SAMN24838599	2017	United Kingdom	Homo sapiens	1198	1	0	0	1.00