GCA_019131575.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaAICKCFPO_6 (original name was: gnl|Prokka|AICKCFPO_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	RRE-containing	38,406	58,672

gnlProkkaAICKCFPO_67 (original name was: gnl|Prokka|AICKCFPO_67)

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	RRE-containing	123,178	143,531

Region	Type	From	To	Most similar known cluster	Similarity
Region 6.1	RRE-containing	38,406	58,672
Region 62.1	RRE-containing	123,178	143,531

No secondary metabolite regions were found in these records:: gnlProkkaAICKCFPO_1 (original name was: gnl|Prokka|AICKCFPO_1); gnlProkkaAICKCFPO_2 (original name was: gnl|Prokka|AICKCFPO_2); gnlProkkaAICKCFPO_3 (original name was: gnl|Prokka|AICKCFPO_3); gnlProkkaAICKCFPO_4 (original name was: gnl|Prokka|AICKCFPO_4); gnlProkkaAICKCFPO_5 (original name was: gnl|Prokka|AICKCFPO_5); gnlProkkaAICKCFPO_7 (original name was: gnl|Prokka|AICKCFPO_7); gnlProkkaAICKCFPO_8 (original name was: gnl|Prokka|AICKCFPO_8); gnlProkkaAICKCFPO_9 (original name was: gnl|Prokka|AICKCFPO_9); gnlProkkaAICKCFPO_10 (original name was: gnl|Prokka|AICKCFPO_10); gnlProkkaAICKCFPO_11 (original name was: gnl|Prokka|AICKCFPO_11); gnlProkkaAICKCFPO_12 (original name was: gnl|Prokka|AICKCFPO_12); gnlProkkaAICKCFPO_13 (original name was: gnl|Prokka|AICKCFPO_13); gnlProkkaAICKCFPO_14 (original name was: gnl|Prokka|AICKCFPO_14); gnlProkkaAICKCFPO_15 (original name was: gnl|Prokka|AICKCFPO_15); gnlProkkaAICKCFPO_16 (original name was: gnl|Prokka|AICKCFPO_16); gnlProkkaAICKCFPO_17 (original name was: gnl|Prokka|AICKCFPO_17); gnlProkkaAICKCFPO_18 (original name was: gnl|Prokka|AICKCFPO_18); gnlProkkaAICKCFPO_19 (original name was: gnl|Prokka|AICKCFPO_19); gnlProkkaAICKCFPO_20 (original name was: gnl|Prokka|AICKCFPO_20); gnlProkkaAICKCFPO_21 (original name was: gnl|Prokka|AICKCFPO_21); gnlProkkaAICKCFPO_22 (original name was: gnl|Prokka|AICKCFPO_22); gnlProkkaAICKCFPO_23 (original name was: gnl|Prokka|AICKCFPO_23); gnlProkkaAICKCFPO_24 (original name was: gnl|Prokka|AICKCFPO_24); gnlProkkaAICKCFPO_25 (original name was: gnl|Prokka|AICKCFPO_25); gnlProkkaAICKCFPO_26 (original name was: gnl|Prokka|AICKCFPO_26); gnlProkkaAICKCFPO_27 (original name was: gnl|Prokka|AICKCFPO_27); gnlProkkaAICKCFPO_28 (original name was: gnl|Prokka|AICKCFPO_28); gnlProkkaAICKCFPO_29 (original name was: gnl|Prokka|AICKCFPO_29); gnlProkkaAICKCFPO_30 (original name was: gnl|Prokka|AICKCFPO_30); gnlProkkaAICKCFPO_31 (original name was: gnl|Prokka|AICKCFPO_31); gnlProkkaAICKCFPO_32 (original name was: gnl|Prokka|AICKCFPO_32); gnlProkkaAICKCFPO_33 (original name was: gnl|Prokka|AICKCFPO_33); gnlProkkaAICKCFPO_34 (original name was: gnl|Prokka|AICKCFPO_34); gnlProkkaAICKCFPO_35 (original name was: gnl|Prokka|AICKCFPO_35); gnlProkkaAICKCFPO_36 (original name was: gnl|Prokka|AICKCFPO_36); gnlProkkaAICKCFPO_37 (original name was: gnl|Prokka|AICKCFPO_37); gnlProkkaAICKCFPO_38 (original name was: gnl|Prokka|AICKCFPO_38); gnlProkkaAICKCFPO_39 (original name was: gnl|Prokka|AICKCFPO_39); gnlProkkaAICKCFPO_40 (original name was: gnl|Prokka|AICKCFPO_40); gnlProkkaAICKCFPO_41 (original name was: gnl|Prokka|AICKCFPO_41); gnlProkkaAICKCFPO_42 (original name was: gnl|Prokka|AICKCFPO_42); gnlProkkaAICKCFPO_43 (original name was: gnl|Prokka|AICKCFPO_43); gnlProkkaAICKCFPO_44 (original name was: gnl|Prokka|AICKCFPO_44); gnlProkkaAICKCFPO_45 (original name was: gnl|Prokka|AICKCFPO_45); gnlProkkaAICKCFPO_46 (original name was: gnl|Prokka|AICKCFPO_46); gnlProkkaAICKCFPO_47 (original name was: gnl|Prokka|AICKCFPO_47); gnlProkkaAICKCFPO_48 (original name was: gnl|Prokka|AICKCFPO_48); gnlProkkaAICKCFPO_49 (original name was: gnl|Prokka|AICKCFPO_49); gnlProkkaAICKCFPO_50 (original name was: gnl|Prokka|AICKCFPO_50); gnlProkkaAICKCFPO_51 (original name was: gnl|Prokka|AICKCFPO_51); gnlProkkaAICKCFPO_52 (original name was: gnl|Prokka|AICKCFPO_52); gnlProkkaAICKCFPO_53 (original name was: gnl|Prokka|AICKCFPO_53); gnlProkkaAICKCFPO_54 (original name was: gnl|Prokka|AICKCFPO_54); gnlProkkaAICKCFPO_55 (original name was: gnl|Prokka|AICKCFPO_55); gnlProkkaAICKCFPO_56 (original name was: gnl|Prokka|AICKCFPO_56); gnlProkkaAICKCFPO_57 (original name was: gnl|Prokka|AICKCFPO_57); gnlProkkaAICKCFPO_58 (original name was: gnl|Prokka|AICKCFPO_58); gnlProkkaAICKCFPO_59 (original name was: gnl|Prokka|AICKCFPO_59); gnlProkkaAICKCFPO_60 (original name was: gnl|Prokka|AICKCFPO_60); gnlProkkaAICKCFPO_61 (original name was: gnl|Prokka|AICKCFPO_61); gnlProkkaAICKCFPO_78 (original name was: gnl|Prokka|AICKCFPO_78); gnlProkkaAICKCFPO_83 (original name was: gnl|Prokka|AICKCFPO_83)

Compact view

gnlProkkaAICKCFPO_6 - Region 1 - RRE-containing

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Location: 38,406 - 58,672 nt. (total: 20,267 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaAICKCFPO_67 - Region 1 - RRE-containing

Download region GenBank file

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Location: 123,178 - 143,531 nt. (total: 20,354 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.