GCA_019131835.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCIKMDHIE_2 (original name was: gnl|Prokka|CIKMDHIE_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RRE-containing	70,499	90,873

gnlProkkaCIKMDHIE_42 (original name was: gnl|Prokka|CIKMDHIE_42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	arylpolyene	1	43,212	flexirubin	Other	48%

gnlProkkaCIKMDHIE_84 (original name was: gnl|Prokka|CIKMDHIE_84)

Region	Type	From	To	Most similar known cluster		Similarity
Region 52.1	resorcinol	1	25,569

gnlProkkaCIKMDHIE_92 (original name was: gnl|Prokka|CIKMDHIE_92)

Region	Type	From	To	Most similar known cluster		Similarity
Region 60.1	RRE-containing	2,392	15,203

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RRE-containing	70,499	90,873
Region 10.1	arylpolyene	1	43,212	flexirubin	Other	48%
Region 52.1	resorcinol	1	25,569
Region 60.1	RRE-containing	2,392	15,203

No secondary metabolite regions were found in these records:: gnlProkkaCIKMDHIE_1 (original name was: gnl|Prokka|CIKMDHIE_1); gnlProkkaCIKMDHIE_12 (original name was: gnl|Prokka|CIKMDHIE_12); gnlProkkaCIKMDHIE_22 (original name was: gnl|Prokka|CIKMDHIE_22); gnlProkkaCIKMDHIE_33 (original name was: gnl|Prokka|CIKMDHIE_33); gnlProkkaCIKMDHIE_38 (original name was: gnl|Prokka|CIKMDHIE_38); gnlProkkaCIKMDHIE_39 (original name was: gnl|Prokka|CIKMDHIE_39); gnlProkkaCIKMDHIE_40 (original name was: gnl|Prokka|CIKMDHIE_40); gnlProkkaCIKMDHIE_41 (original name was: gnl|Prokka|CIKMDHIE_41); gnlProkkaCIKMDHIE_43 (original name was: gnl|Prokka|CIKMDHIE_43); gnlProkkaCIKMDHIE_44 (original name was: gnl|Prokka|CIKMDHIE_44); gnlProkkaCIKMDHIE_45 (original name was: gnl|Prokka|CIKMDHIE_45); gnlProkkaCIKMDHIE_46 (original name was: gnl|Prokka|CIKMDHIE_46); gnlProkkaCIKMDHIE_47 (original name was: gnl|Prokka|CIKMDHIE_47); gnlProkkaCIKMDHIE_48 (original name was: gnl|Prokka|CIKMDHIE_48); gnlProkkaCIKMDHIE_49 (original name was: gnl|Prokka|CIKMDHIE_49); gnlProkkaCIKMDHIE_50 (original name was: gnl|Prokka|CIKMDHIE_50); gnlProkkaCIKMDHIE_51 (original name was: gnl|Prokka|CIKMDHIE_51); gnlProkkaCIKMDHIE_52 (original name was: gnl|Prokka|CIKMDHIE_52); gnlProkkaCIKMDHIE_53 (original name was: gnl|Prokka|CIKMDHIE_53); gnlProkkaCIKMDHIE_54 (original name was: gnl|Prokka|CIKMDHIE_54); gnlProkkaCIKMDHIE_55 (original name was: gnl|Prokka|CIKMDHIE_55); gnlProkkaCIKMDHIE_56 (original name was: gnl|Prokka|CIKMDHIE_56); gnlProkkaCIKMDHIE_57 (original name was: gnl|Prokka|CIKMDHIE_57); gnlProkkaCIKMDHIE_58 (original name was: gnl|Prokka|CIKMDHIE_58); gnlProkkaCIKMDHIE_59 (original name was: gnl|Prokka|CIKMDHIE_59); gnlProkkaCIKMDHIE_60 (original name was: gnl|Prokka|CIKMDHIE_60); gnlProkkaCIKMDHIE_61 (original name was: gnl|Prokka|CIKMDHIE_61); gnlProkkaCIKMDHIE_62 (original name was: gnl|Prokka|CIKMDHIE_62); gnlProkkaCIKMDHIE_63 (original name was: gnl|Prokka|CIKMDHIE_63); gnlProkkaCIKMDHIE_64 (original name was: gnl|Prokka|CIKMDHIE_64); gnlProkkaCIKMDHIE_65 (original name was: gnl|Prokka|CIKMDHIE_65); gnlProkkaCIKMDHIE_66 (original name was: gnl|Prokka|CIKMDHIE_66); gnlProkkaCIKMDHIE_67 (original name was: gnl|Prokka|CIKMDHIE_67); gnlProkkaCIKMDHIE_68 (original name was: gnl|Prokka|CIKMDHIE_68); gnlProkkaCIKMDHIE_69 (original name was: gnl|Prokka|CIKMDHIE_69); gnlProkkaCIKMDHIE_70 (original name was: gnl|Prokka|CIKMDHIE_70); gnlProkkaCIKMDHIE_71 (original name was: gnl|Prokka|CIKMDHIE_71); gnlProkkaCIKMDHIE_72 (original name was: gnl|Prokka|CIKMDHIE_72); gnlProkkaCIKMDHIE_73 (original name was: gnl|Prokka|CIKMDHIE_73); gnlProkkaCIKMDHIE_74 (original name was: gnl|Prokka|CIKMDHIE_74); gnlProkkaCIKMDHIE_75 (original name was: gnl|Prokka|CIKMDHIE_75); gnlProkkaCIKMDHIE_76 (original name was: gnl|Prokka|CIKMDHIE_76); gnlProkkaCIKMDHIE_77 (original name was: gnl|Prokka|CIKMDHIE_77); gnlProkkaCIKMDHIE_78 (original name was: gnl|Prokka|CIKMDHIE_78); gnlProkkaCIKMDHIE_79 (original name was: gnl|Prokka|CIKMDHIE_79); gnlProkkaCIKMDHIE_80 (original name was: gnl|Prokka|CIKMDHIE_80); gnlProkkaCIKMDHIE_81 (original name was: gnl|Prokka|CIKMDHIE_81); gnlProkkaCIKMDHIE_82 (original name was: gnl|Prokka|CIKMDHIE_82); gnlProkkaCIKMDHIE_83 (original name was: gnl|Prokka|CIKMDHIE_83); gnlProkkaCIKMDHIE_85 (original name was: gnl|Prokka|CIKMDHIE_85); gnlProkkaCIKMDHIE_86 (original name was: gnl|Prokka|CIKMDHIE_86); gnlProkkaCIKMDHIE_87 (original name was: gnl|Prokka|CIKMDHIE_87); gnlProkkaCIKMDHIE_88 (original name was: gnl|Prokka|CIKMDHIE_88); gnlProkkaCIKMDHIE_89 (original name was: gnl|Prokka|CIKMDHIE_89); gnlProkkaCIKMDHIE_90 (original name was: gnl|Prokka|CIKMDHIE_90); gnlProkkaCIKMDHIE_91 (original name was: gnl|Prokka|CIKMDHIE_91); gnlProkkaCIKMDHIE_93 (original name was: gnl|Prokka|CIKMDHIE_93); gnlProkkaCIKMDHIE_94 (original name was: gnl|Prokka|CIKMDHIE_94); gnlProkkaCIKMDHIE_95 (original name was: gnl|Prokka|CIKMDHIE_95); gnlProkkaCIKMDHIE_96 (original name was: gnl|Prokka|CIKMDHIE_96); gnlProkkaCIKMDHIE_97 (original name was: gnl|Prokka|CIKMDHIE_97); gnlProkkaCIKMDHIE_98 (original name was: gnl|Prokka|CIKMDHIE_98); gnlProkkaCIKMDHIE_99 (original name was: gnl|Prokka|CIKMDHIE_99); gnlProkkaCIKMDHIE_100 (original name was: gnl|Prokka|CIKMDHIE_100); gnlProkkaCIKMDHIE_101 (original name was: gnl|Prokka|CIKMDHIE_101); gnlProkkaCIKMDHIE_102 (original name was: gnl|Prokka|CIKMDHIE_102); gnlProkkaCIKMDHIE_103 (original name was: gnl|Prokka|CIKMDHIE_103); gnlProkkaCIKMDHIE_104 (original name was: gnl|Prokka|CIKMDHIE_104); gnlProkkaCIKMDHIE_105 (original name was: gnl|Prokka|CIKMDHIE_105); gnlProkkaCIKMDHIE_106 (original name was: gnl|Prokka|CIKMDHIE_106); gnlProkkaCIKMDHIE_107 (original name was: gnl|Prokka|CIKMDHIE_107); gnlProkkaCIKMDHIE_108 (original name was: gnl|Prokka|CIKMDHIE_108); gnlProkkaCIKMDHIE_109 (original name was: gnl|Prokka|CIKMDHIE_109); gnlProkkaCIKMDHIE_110 (original name was: gnl|Prokka|CIKMDHIE_110); gnlProkkaCIKMDHIE_111 (original name was: gnl|Prokka|CIKMDHIE_111); gnlProkkaCIKMDHIE_112 (original name was: gnl|Prokka|CIKMDHIE_112); gnlProkkaCIKMDHIE_113 (original name was: gnl|Prokka|CIKMDHIE_113); gnlProkkaCIKMDHIE_114 (original name was: gnl|Prokka|CIKMDHIE_114); gnlProkkaCIKMDHIE_115 (original name was: gnl|Prokka|CIKMDHIE_115); gnlProkkaCIKMDHIE_116 (original name was: gnl|Prokka|CIKMDHIE_116); gnlProkkaCIKMDHIE_117 (original name was: gnl|Prokka|CIKMDHIE_117); gnlProkkaCIKMDHIE_118 (original name was: gnl|Prokka|CIKMDHIE_118); gnlProkkaCIKMDHIE_119 (original name was: gnl|Prokka|CIKMDHIE_119); gnlProkkaCIKMDHIE_120 (original name was: gnl|Prokka|CIKMDHIE_120); gnlProkkaCIKMDHIE_121 (original name was: gnl|Prokka|CIKMDHIE_121); gnlProkkaCIKMDHIE_122 (original name was: gnl|Prokka|CIKMDHIE_122); gnlProkkaCIKMDHIE_123 (original name was: gnl|Prokka|CIKMDHIE_123); gnlProkkaCIKMDHIE_124 (original name was: gnl|Prokka|CIKMDHIE_124); gnlProkkaCIKMDHIE_125 (original name was: gnl|Prokka|CIKMDHIE_125); gnlProkkaCIKMDHIE_126 (original name was: gnl|Prokka|CIKMDHIE_126)

Compact view

gnlProkkaCIKMDHIE_2 - Region 1 - RRE-containing

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Location: 70,499 - 90,873 nt. (total: 20,375 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCIKMDHIE_42 - Region 1 - arylpolyene

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Location: 1 - 43,212 nt. (total: 43,212 nt) Show pHMM detection rules used

Region on contig edge.

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg10_4

AMP-binding (55..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaCIKMDHIE_84 - Region 1 - resorcinol

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Location: 1 - 25,569 nt. (total: 25,569 nt) Show pHMM detection rules used

Region on contig edge.

resorcinol: DarB

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaCIKMDHIE_92 - Region 1 - RRE-containing

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Location: 2,392 - 15,203 nt. (total: 12,812 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.