GCA_019456025.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaJMMALDNJ_12 (original name was: gnl|Prokka|JMMALDNJ_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	NRPS	191,146	233,791

Region	Type	From	To	Most similar known cluster	Similarity
Region 12.1	NRPS	191,146	233,791

No secondary metabolite regions were found in these records:: gnlProkkaJMMALDNJ_1 (original name was: gnl|Prokka|JMMALDNJ_1); gnlProkkaJMMALDNJ_2 (original name was: gnl|Prokka|JMMALDNJ_2); gnlProkkaJMMALDNJ_3 (original name was: gnl|Prokka|JMMALDNJ_3); gnlProkkaJMMALDNJ_4 (original name was: gnl|Prokka|JMMALDNJ_4); gnlProkkaJMMALDNJ_5 (original name was: gnl|Prokka|JMMALDNJ_5); gnlProkkaJMMALDNJ_6 (original name was: gnl|Prokka|JMMALDNJ_6); gnlProkkaJMMALDNJ_7 (original name was: gnl|Prokka|JMMALDNJ_7); gnlProkkaJMMALDNJ_8 (original name was: gnl|Prokka|JMMALDNJ_8); gnlProkkaJMMALDNJ_9 (original name was: gnl|Prokka|JMMALDNJ_9); gnlProkkaJMMALDNJ_10 (original name was: gnl|Prokka|JMMALDNJ_10); gnlProkkaJMMALDNJ_11 (original name was: gnl|Prokka|JMMALDNJ_11); gnlProkkaJMMALDNJ_13 (original name was: gnl|Prokka|JMMALDNJ_13); gnlProkkaJMMALDNJ_14 (original name was: gnl|Prokka|JMMALDNJ_14); gnlProkkaJMMALDNJ_15 (original name was: gnl|Prokka|JMMALDNJ_15); gnlProkkaJMMALDNJ_16 (original name was: gnl|Prokka|JMMALDNJ_16); gnlProkkaJMMALDNJ_17 (original name was: gnl|Prokka|JMMALDNJ_17); gnlProkkaJMMALDNJ_18 (original name was: gnl|Prokka|JMMALDNJ_18); gnlProkkaJMMALDNJ_19 (original name was: gnl|Prokka|JMMALDNJ_19); gnlProkkaJMMALDNJ_20 (original name was: gnl|Prokka|JMMALDNJ_20); gnlProkkaJMMALDNJ_21 (original name was: gnl|Prokka|JMMALDNJ_21); gnlProkkaJMMALDNJ_22 (original name was: gnl|Prokka|JMMALDNJ_22); gnlProkkaJMMALDNJ_23 (original name was: gnl|Prokka|JMMALDNJ_23); gnlProkkaJMMALDNJ_24 (original name was: gnl|Prokka|JMMALDNJ_24)

Compact view

gnlProkkaJMMALDNJ_12 - Region 1 - NRPS

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Location: 191,146 - 233,791 nt. (total: 42,646 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

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NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 191145 - 233791:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg12_221

AMP-binding (15..395): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DVHAVACIYK
Nearest Stachelhaus code(s):: Aol DVHSVAAVYK (59% 8Å match)
Stachelhaus code match:: 70% (weak)