GCA_019733615.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCGOGCMIF_17 (original name was: gnl|Prokka|CGOGCMIF_17)

Region	Type	From	To	Most similar known cluster		Similarity
Region 17.1	phosphonate	44,295	70,691	polysaccharide B	Saccharide	13%

gnlProkkaCGOGCMIF_42 (original name was: gnl|Prokka|CGOGCMIF_42)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	RRE-containing	71,730	92,077

No secondary metabolite regions were found in these records:: gnlProkkaCGOGCMIF_1 (original name was: gnl|Prokka|CGOGCMIF_1); gnlProkkaCGOGCMIF_2 (original name was: gnl|Prokka|CGOGCMIF_2); gnlProkkaCGOGCMIF_3 (original name was: gnl|Prokka|CGOGCMIF_3); gnlProkkaCGOGCMIF_4 (original name was: gnl|Prokka|CGOGCMIF_4); gnlProkkaCGOGCMIF_5 (original name was: gnl|Prokka|CGOGCMIF_5); gnlProkkaCGOGCMIF_6 (original name was: gnl|Prokka|CGOGCMIF_6); gnlProkkaCGOGCMIF_7 (original name was: gnl|Prokka|CGOGCMIF_7); gnlProkkaCGOGCMIF_8 (original name was: gnl|Prokka|CGOGCMIF_8); gnlProkkaCGOGCMIF_9 (original name was: gnl|Prokka|CGOGCMIF_9); gnlProkkaCGOGCMIF_10 (original name was: gnl|Prokka|CGOGCMIF_10); gnlProkkaCGOGCMIF_11 (original name was: gnl|Prokka|CGOGCMIF_11); gnlProkkaCGOGCMIF_12 (original name was: gnl|Prokka|CGOGCMIF_12); gnlProkkaCGOGCMIF_13 (original name was: gnl|Prokka|CGOGCMIF_13); gnlProkkaCGOGCMIF_14 (original name was: gnl|Prokka|CGOGCMIF_14); gnlProkkaCGOGCMIF_15 (original name was: gnl|Prokka|CGOGCMIF_15); gnlProkkaCGOGCMIF_16 (original name was: gnl|Prokka|CGOGCMIF_16); gnlProkkaCGOGCMIF_18 (original name was: gnl|Prokka|CGOGCMIF_18); gnlProkkaCGOGCMIF_19 (original name was: gnl|Prokka|CGOGCMIF_19); gnlProkkaCGOGCMIF_20 (original name was: gnl|Prokka|CGOGCMIF_20); gnlProkkaCGOGCMIF_21 (original name was: gnl|Prokka|CGOGCMIF_21); gnlProkkaCGOGCMIF_22 (original name was: gnl|Prokka|CGOGCMIF_22); gnlProkkaCGOGCMIF_23 (original name was: gnl|Prokka|CGOGCMIF_23); gnlProkkaCGOGCMIF_24 (original name was: gnl|Prokka|CGOGCMIF_24); gnlProkkaCGOGCMIF_25 (original name was: gnl|Prokka|CGOGCMIF_25); gnlProkkaCGOGCMIF_26 (original name was: gnl|Prokka|CGOGCMIF_26); gnlProkkaCGOGCMIF_27 (original name was: gnl|Prokka|CGOGCMIF_27); gnlProkkaCGOGCMIF_28 (original name was: gnl|Prokka|CGOGCMIF_28); gnlProkkaCGOGCMIF_29 (original name was: gnl|Prokka|CGOGCMIF_29); gnlProkkaCGOGCMIF_30 (original name was: gnl|Prokka|CGOGCMIF_30); gnlProkkaCGOGCMIF_31 (original name was: gnl|Prokka|CGOGCMIF_31); gnlProkkaCGOGCMIF_32 (original name was: gnl|Prokka|CGOGCMIF_32); gnlProkkaCGOGCMIF_33 (original name was: gnl|Prokka|CGOGCMIF_33); gnlProkkaCGOGCMIF_34 (original name was: gnl|Prokka|CGOGCMIF_34); gnlProkkaCGOGCMIF_35 (original name was: gnl|Prokka|CGOGCMIF_35); gnlProkkaCGOGCMIF_36 (original name was: gnl|Prokka|CGOGCMIF_36); gnlProkkaCGOGCMIF_37 (original name was: gnl|Prokka|CGOGCMIF_37); gnlProkkaCGOGCMIF_38 (original name was: gnl|Prokka|CGOGCMIF_38); gnlProkkaCGOGCMIF_39 (original name was: gnl|Prokka|CGOGCMIF_39); gnlProkkaCGOGCMIF_40 (original name was: gnl|Prokka|CGOGCMIF_40); gnlProkkaCGOGCMIF_41 (original name was: gnl|Prokka|CGOGCMIF_41); gnlProkkaCGOGCMIF_43 (original name was: gnl|Prokka|CGOGCMIF_43); gnlProkkaCGOGCMIF_44 (original name was: gnl|Prokka|CGOGCMIF_44); gnlProkkaCGOGCMIF_45 (original name was: gnl|Prokka|CGOGCMIF_45)

Compact view

gnlProkkaCGOGCMIF_17 - Region 1 - phosphonate

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Location: 44,295 - 70,691 nt. (total: 26,397 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaCGOGCMIF_42 - Region 1 - RRE-containing

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Location: 71,730 - 92,077 nt. (total: 20,348 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.