GCA_019990845.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMDDPOOHJ_13 (original name was: gnl|Prokka|MDDPOOHJ_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	100,029	118,000

gnlProkkaMDDPOOHJ_43 (original name was: gnl|Prokka|MDDPOOHJ_43)

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	T3PKS	1	28,635

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	RiPP-like	100,029	118,000
Region 34.1	T3PKS	1	28,635

No secondary metabolite regions were found in these records:: gnlProkkaMDDPOOHJ_1 (original name was: gnl|Prokka|MDDPOOHJ_1); gnlProkkaMDDPOOHJ_2 (original name was: gnl|Prokka|MDDPOOHJ_2); gnlProkkaMDDPOOHJ_3 (original name was: gnl|Prokka|MDDPOOHJ_3); gnlProkkaMDDPOOHJ_4 (original name was: gnl|Prokka|MDDPOOHJ_4); gnlProkkaMDDPOOHJ_5 (original name was: gnl|Prokka|MDDPOOHJ_5); gnlProkkaMDDPOOHJ_6 (original name was: gnl|Prokka|MDDPOOHJ_6); gnlProkkaMDDPOOHJ_7 (original name was: gnl|Prokka|MDDPOOHJ_7); gnlProkkaMDDPOOHJ_8 (original name was: gnl|Prokka|MDDPOOHJ_8); gnlProkkaMDDPOOHJ_9 (original name was: gnl|Prokka|MDDPOOHJ_9); gnlProkkaMDDPOOHJ_12 (original name was: gnl|Prokka|MDDPOOHJ_12); gnlProkkaMDDPOOHJ_15 (original name was: gnl|Prokka|MDDPOOHJ_15); gnlProkkaMDDPOOHJ_16 (original name was: gnl|Prokka|MDDPOOHJ_16); gnlProkkaMDDPOOHJ_17 (original name was: gnl|Prokka|MDDPOOHJ_17); gnlProkkaMDDPOOHJ_18 (original name was: gnl|Prokka|MDDPOOHJ_18); gnlProkkaMDDPOOHJ_19 (original name was: gnl|Prokka|MDDPOOHJ_19); gnlProkkaMDDPOOHJ_20 (original name was: gnl|Prokka|MDDPOOHJ_20); gnlProkkaMDDPOOHJ_21 (original name was: gnl|Prokka|MDDPOOHJ_21); gnlProkkaMDDPOOHJ_22 (original name was: gnl|Prokka|MDDPOOHJ_22); gnlProkkaMDDPOOHJ_23 (original name was: gnl|Prokka|MDDPOOHJ_23); gnlProkkaMDDPOOHJ_24 (original name was: gnl|Prokka|MDDPOOHJ_24); gnlProkkaMDDPOOHJ_25 (original name was: gnl|Prokka|MDDPOOHJ_25); gnlProkkaMDDPOOHJ_26 (original name was: gnl|Prokka|MDDPOOHJ_26); gnlProkkaMDDPOOHJ_27 (original name was: gnl|Prokka|MDDPOOHJ_27); gnlProkkaMDDPOOHJ_29 (original name was: gnl|Prokka|MDDPOOHJ_29); gnlProkkaMDDPOOHJ_30 (original name was: gnl|Prokka|MDDPOOHJ_30); gnlProkkaMDDPOOHJ_31 (original name was: gnl|Prokka|MDDPOOHJ_31); gnlProkkaMDDPOOHJ_32 (original name was: gnl|Prokka|MDDPOOHJ_32); gnlProkkaMDDPOOHJ_33 (original name was: gnl|Prokka|MDDPOOHJ_33); gnlProkkaMDDPOOHJ_34 (original name was: gnl|Prokka|MDDPOOHJ_34); gnlProkkaMDDPOOHJ_35 (original name was: gnl|Prokka|MDDPOOHJ_35); gnlProkkaMDDPOOHJ_36 (original name was: gnl|Prokka|MDDPOOHJ_36); gnlProkkaMDDPOOHJ_37 (original name was: gnl|Prokka|MDDPOOHJ_37); gnlProkkaMDDPOOHJ_44 (original name was: gnl|Prokka|MDDPOOHJ_44); gnlProkkaMDDPOOHJ_45 (original name was: gnl|Prokka|MDDPOOHJ_45); gnlProkkaMDDPOOHJ_46 (original name was: gnl|Prokka|MDDPOOHJ_46); gnlProkkaMDDPOOHJ_47 (original name was: gnl|Prokka|MDDPOOHJ_47); gnlProkkaMDDPOOHJ_48 (original name was: gnl|Prokka|MDDPOOHJ_48); gnlProkkaMDDPOOHJ_49 (original name was: gnl|Prokka|MDDPOOHJ_49); gnlProkkaMDDPOOHJ_50 (original name was: gnl|Prokka|MDDPOOHJ_50); gnlProkkaMDDPOOHJ_54 (original name was: gnl|Prokka|MDDPOOHJ_54); gnlProkkaMDDPOOHJ_55 (original name was: gnl|Prokka|MDDPOOHJ_55); gnlProkkaMDDPOOHJ_56 (original name was: gnl|Prokka|MDDPOOHJ_56)

Compact view

gnlProkkaMDDPOOHJ_13 - Region 1 - RiPP-like

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Location: 100,029 - 118,000 nt. (total: 17,972 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMDDPOOHJ_43 - Region 1 - T3PKS