GCA_020256425.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFFIMOJCI_1 (original name was: gnl|Prokka|FFIMOJCI_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RRE-containing	83,704	103,988

gnlProkkaFFIMOJCI_9 (original name was: gnl|Prokka|FFIMOJCI_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	arylpolyene	10,261	58,043	flexirubin	Other	48%

gnlProkkaFFIMOJCI_63 (original name was: gnl|Prokka|FFIMOJCI_63)

Region	Type	From	To	Most similar known cluster		Similarity
Region 63.1	RRE-containing	43,166	63,516

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	RRE-containing	83,704	103,988
Region 9.1	arylpolyene	10,261	58,043	flexirubin	Other	48%
Region 63.1	RRE-containing	43,166	63,516

No secondary metabolite regions were found in these records:: gnlProkkaFFIMOJCI_2 (original name was: gnl|Prokka|FFIMOJCI_2); gnlProkkaFFIMOJCI_3 (original name was: gnl|Prokka|FFIMOJCI_3); gnlProkkaFFIMOJCI_4 (original name was: gnl|Prokka|FFIMOJCI_4); gnlProkkaFFIMOJCI_5 (original name was: gnl|Prokka|FFIMOJCI_5); gnlProkkaFFIMOJCI_6 (original name was: gnl|Prokka|FFIMOJCI_6); gnlProkkaFFIMOJCI_7 (original name was: gnl|Prokka|FFIMOJCI_7); gnlProkkaFFIMOJCI_8 (original name was: gnl|Prokka|FFIMOJCI_8); gnlProkkaFFIMOJCI_10 (original name was: gnl|Prokka|FFIMOJCI_10); gnlProkkaFFIMOJCI_11 (original name was: gnl|Prokka|FFIMOJCI_11); gnlProkkaFFIMOJCI_12 (original name was: gnl|Prokka|FFIMOJCI_12); gnlProkkaFFIMOJCI_13 (original name was: gnl|Prokka|FFIMOJCI_13); gnlProkkaFFIMOJCI_14 (original name was: gnl|Prokka|FFIMOJCI_14); gnlProkkaFFIMOJCI_15 (original name was: gnl|Prokka|FFIMOJCI_15); gnlProkkaFFIMOJCI_16 (original name was: gnl|Prokka|FFIMOJCI_16); gnlProkkaFFIMOJCI_17 (original name was: gnl|Prokka|FFIMOJCI_17); gnlProkkaFFIMOJCI_18 (original name was: gnl|Prokka|FFIMOJCI_18); gnlProkkaFFIMOJCI_19 (original name was: gnl|Prokka|FFIMOJCI_19); gnlProkkaFFIMOJCI_20 (original name was: gnl|Prokka|FFIMOJCI_20); gnlProkkaFFIMOJCI_21 (original name was: gnl|Prokka|FFIMOJCI_21); gnlProkkaFFIMOJCI_22 (original name was: gnl|Prokka|FFIMOJCI_22); gnlProkkaFFIMOJCI_23 (original name was: gnl|Prokka|FFIMOJCI_23); gnlProkkaFFIMOJCI_24 (original name was: gnl|Prokka|FFIMOJCI_24); gnlProkkaFFIMOJCI_25 (original name was: gnl|Prokka|FFIMOJCI_25); gnlProkkaFFIMOJCI_26 (original name was: gnl|Prokka|FFIMOJCI_26); gnlProkkaFFIMOJCI_27 (original name was: gnl|Prokka|FFIMOJCI_27); gnlProkkaFFIMOJCI_28 (original name was: gnl|Prokka|FFIMOJCI_28); gnlProkkaFFIMOJCI_29 (original name was: gnl|Prokka|FFIMOJCI_29); gnlProkkaFFIMOJCI_30 (original name was: gnl|Prokka|FFIMOJCI_30); gnlProkkaFFIMOJCI_31 (original name was: gnl|Prokka|FFIMOJCI_31); gnlProkkaFFIMOJCI_32 (original name was: gnl|Prokka|FFIMOJCI_32); gnlProkkaFFIMOJCI_33 (original name was: gnl|Prokka|FFIMOJCI_33); gnlProkkaFFIMOJCI_34 (original name was: gnl|Prokka|FFIMOJCI_34); gnlProkkaFFIMOJCI_35 (original name was: gnl|Prokka|FFIMOJCI_35); gnlProkkaFFIMOJCI_36 (original name was: gnl|Prokka|FFIMOJCI_36); gnlProkkaFFIMOJCI_37 (original name was: gnl|Prokka|FFIMOJCI_37); gnlProkkaFFIMOJCI_38 (original name was: gnl|Prokka|FFIMOJCI_38); gnlProkkaFFIMOJCI_39 (original name was: gnl|Prokka|FFIMOJCI_39); gnlProkkaFFIMOJCI_40 (original name was: gnl|Prokka|FFIMOJCI_40); gnlProkkaFFIMOJCI_41 (original name was: gnl|Prokka|FFIMOJCI_41); gnlProkkaFFIMOJCI_42 (original name was: gnl|Prokka|FFIMOJCI_42); gnlProkkaFFIMOJCI_43 (original name was: gnl|Prokka|FFIMOJCI_43); gnlProkkaFFIMOJCI_44 (original name was: gnl|Prokka|FFIMOJCI_44); gnlProkkaFFIMOJCI_45 (original name was: gnl|Prokka|FFIMOJCI_45); gnlProkkaFFIMOJCI_46 (original name was: gnl|Prokka|FFIMOJCI_46); gnlProkkaFFIMOJCI_47 (original name was: gnl|Prokka|FFIMOJCI_47); gnlProkkaFFIMOJCI_48 (original name was: gnl|Prokka|FFIMOJCI_48); gnlProkkaFFIMOJCI_49 (original name was: gnl|Prokka|FFIMOJCI_49); gnlProkkaFFIMOJCI_50 (original name was: gnl|Prokka|FFIMOJCI_50); gnlProkkaFFIMOJCI_51 (original name was: gnl|Prokka|FFIMOJCI_51); gnlProkkaFFIMOJCI_52 (original name was: gnl|Prokka|FFIMOJCI_52); gnlProkkaFFIMOJCI_53 (original name was: gnl|Prokka|FFIMOJCI_53); gnlProkkaFFIMOJCI_54 (original name was: gnl|Prokka|FFIMOJCI_54); gnlProkkaFFIMOJCI_55 (original name was: gnl|Prokka|FFIMOJCI_55); gnlProkkaFFIMOJCI_56 (original name was: gnl|Prokka|FFIMOJCI_56); gnlProkkaFFIMOJCI_57 (original name was: gnl|Prokka|FFIMOJCI_57); gnlProkkaFFIMOJCI_58 (original name was: gnl|Prokka|FFIMOJCI_58); gnlProkkaFFIMOJCI_59 (original name was: gnl|Prokka|FFIMOJCI_59); gnlProkkaFFIMOJCI_60 (original name was: gnl|Prokka|FFIMOJCI_60); gnlProkkaFFIMOJCI_61 (original name was: gnl|Prokka|FFIMOJCI_61); gnlProkkaFFIMOJCI_62 (original name was: gnl|Prokka|FFIMOJCI_62)

Compact view

gnlProkkaFFIMOJCI_1 - Region 1 - RRE-containing

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Location: 83,704 - 103,988 nt. (total: 20,285 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFFIMOJCI_9 - Region 1 - arylpolyene

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Location: 10,261 - 58,043 nt. (total: 47,783 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg9_16

AMP-binding (56..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaFFIMOJCI_63 - Region 1 - RRE-containing

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Location: 43,166 - 63,516 nt. (total: 20,351 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.