GCA_020256465.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEENMHOFK_11 (original name was: gnl|Prokka|EENMHOFK_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	18,139	38,489

gnlProkkaEENMHOFK_15 (original name was: gnl|Prokka|EENMHOFK_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	arylpolyene	6,018	53,800	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	RRE-containing	18,139	38,489
Region 15.1	arylpolyene	6,018	53,800	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaEENMHOFK_1 (original name was: gnl|Prokka|EENMHOFK_1); gnlProkkaEENMHOFK_2 (original name was: gnl|Prokka|EENMHOFK_2); gnlProkkaEENMHOFK_3 (original name was: gnl|Prokka|EENMHOFK_3); gnlProkkaEENMHOFK_4 (original name was: gnl|Prokka|EENMHOFK_4); gnlProkkaEENMHOFK_5 (original name was: gnl|Prokka|EENMHOFK_5); gnlProkkaEENMHOFK_6 (original name was: gnl|Prokka|EENMHOFK_6); gnlProkkaEENMHOFK_7 (original name was: gnl|Prokka|EENMHOFK_7); gnlProkkaEENMHOFK_8 (original name was: gnl|Prokka|EENMHOFK_8); gnlProkkaEENMHOFK_9 (original name was: gnl|Prokka|EENMHOFK_9); gnlProkkaEENMHOFK_10 (original name was: gnl|Prokka|EENMHOFK_10); gnlProkkaEENMHOFK_12 (original name was: gnl|Prokka|EENMHOFK_12); gnlProkkaEENMHOFK_13 (original name was: gnl|Prokka|EENMHOFK_13); gnlProkkaEENMHOFK_14 (original name was: gnl|Prokka|EENMHOFK_14); gnlProkkaEENMHOFK_16 (original name was: gnl|Prokka|EENMHOFK_16); gnlProkkaEENMHOFK_17 (original name was: gnl|Prokka|EENMHOFK_17); gnlProkkaEENMHOFK_18 (original name was: gnl|Prokka|EENMHOFK_18); gnlProkkaEENMHOFK_19 (original name was: gnl|Prokka|EENMHOFK_19); gnlProkkaEENMHOFK_20 (original name was: gnl|Prokka|EENMHOFK_20); gnlProkkaEENMHOFK_21 (original name was: gnl|Prokka|EENMHOFK_21); gnlProkkaEENMHOFK_22 (original name was: gnl|Prokka|EENMHOFK_22); gnlProkkaEENMHOFK_23 (original name was: gnl|Prokka|EENMHOFK_23); gnlProkkaEENMHOFK_24 (original name was: gnl|Prokka|EENMHOFK_24); gnlProkkaEENMHOFK_25 (original name was: gnl|Prokka|EENMHOFK_25); gnlProkkaEENMHOFK_26 (original name was: gnl|Prokka|EENMHOFK_26); gnlProkkaEENMHOFK_27 (original name was: gnl|Prokka|EENMHOFK_27); gnlProkkaEENMHOFK_28 (original name was: gnl|Prokka|EENMHOFK_28); gnlProkkaEENMHOFK_29 (original name was: gnl|Prokka|EENMHOFK_29); gnlProkkaEENMHOFK_30 (original name was: gnl|Prokka|EENMHOFK_30); gnlProkkaEENMHOFK_31 (original name was: gnl|Prokka|EENMHOFK_31); gnlProkkaEENMHOFK_32 (original name was: gnl|Prokka|EENMHOFK_32); gnlProkkaEENMHOFK_33 (original name was: gnl|Prokka|EENMHOFK_33); gnlProkkaEENMHOFK_34 (original name was: gnl|Prokka|EENMHOFK_34); gnlProkkaEENMHOFK_35 (original name was: gnl|Prokka|EENMHOFK_35); gnlProkkaEENMHOFK_36 (original name was: gnl|Prokka|EENMHOFK_36); gnlProkkaEENMHOFK_37 (original name was: gnl|Prokka|EENMHOFK_37); gnlProkkaEENMHOFK_38 (original name was: gnl|Prokka|EENMHOFK_38); gnlProkkaEENMHOFK_39 (original name was: gnl|Prokka|EENMHOFK_39); gnlProkkaEENMHOFK_40 (original name was: gnl|Prokka|EENMHOFK_40); gnlProkkaEENMHOFK_41 (original name was: gnl|Prokka|EENMHOFK_41); gnlProkkaEENMHOFK_42 (original name was: gnl|Prokka|EENMHOFK_42); gnlProkkaEENMHOFK_43 (original name was: gnl|Prokka|EENMHOFK_43); gnlProkkaEENMHOFK_44 (original name was: gnl|Prokka|EENMHOFK_44); gnlProkkaEENMHOFK_45 (original name was: gnl|Prokka|EENMHOFK_45); gnlProkkaEENMHOFK_46 (original name was: gnl|Prokka|EENMHOFK_46); gnlProkkaEENMHOFK_47 (original name was: gnl|Prokka|EENMHOFK_47); gnlProkkaEENMHOFK_48 (original name was: gnl|Prokka|EENMHOFK_48); gnlProkkaEENMHOFK_49 (original name was: gnl|Prokka|EENMHOFK_49); gnlProkkaEENMHOFK_50 (original name was: gnl|Prokka|EENMHOFK_50); gnlProkkaEENMHOFK_51 (original name was: gnl|Prokka|EENMHOFK_51); gnlProkkaEENMHOFK_52 (original name was: gnl|Prokka|EENMHOFK_52); gnlProkkaEENMHOFK_53 (original name was: gnl|Prokka|EENMHOFK_53); gnlProkkaEENMHOFK_54 (original name was: gnl|Prokka|EENMHOFK_54); gnlProkkaEENMHOFK_55 (original name was: gnl|Prokka|EENMHOFK_55)

Compact view

gnlProkkaEENMHOFK_11 - Region 1 - RRE-containing

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Location: 18,139 - 38,489 nt. (total: 20,351 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEENMHOFK_15 - Region 1 - arylpolyene

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Location: 6,018 - 53,800 nt. (total: 47,783 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg15_12

AMP-binding (50..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)