GCA_020256705.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaKKPKGGOH_2 (original name was: gnl|Prokka|KKPKGGOH_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RRE-containing	43,166	63,516

gnlProkkaKKPKGGOH_10 (original name was: gnl|Prokka|KKPKGGOH_10)

Region	Type	From	To	Most similar known cluster		Similarity
Region 10.1	arylpolyene	10,260	58,042	flexirubin	Other	48%

gnlProkkaKKPKGGOH_59 (original name was: gnl|Prokka|KKPKGGOH_59)

Region	Type	From	To	Most similar known cluster		Similarity
Region 59.1	RRE-containing	97,931	118,215

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RRE-containing	43,166	63,516
Region 10.1	arylpolyene	10,260	58,042	flexirubin	Other	48%
Region 59.1	RRE-containing	97,931	118,215

No secondary metabolite regions were found in these records:: gnlProkkaKKPKGGOH_1 (original name was: gnl|Prokka|KKPKGGOH_1); gnlProkkaKKPKGGOH_3 (original name was: gnl|Prokka|KKPKGGOH_3); gnlProkkaKKPKGGOH_4 (original name was: gnl|Prokka|KKPKGGOH_4); gnlProkkaKKPKGGOH_5 (original name was: gnl|Prokka|KKPKGGOH_5); gnlProkkaKKPKGGOH_6 (original name was: gnl|Prokka|KKPKGGOH_6); gnlProkkaKKPKGGOH_7 (original name was: gnl|Prokka|KKPKGGOH_7); gnlProkkaKKPKGGOH_8 (original name was: gnl|Prokka|KKPKGGOH_8); gnlProkkaKKPKGGOH_9 (original name was: gnl|Prokka|KKPKGGOH_9); gnlProkkaKKPKGGOH_11 (original name was: gnl|Prokka|KKPKGGOH_11); gnlProkkaKKPKGGOH_12 (original name was: gnl|Prokka|KKPKGGOH_12); gnlProkkaKKPKGGOH_13 (original name was: gnl|Prokka|KKPKGGOH_13); gnlProkkaKKPKGGOH_14 (original name was: gnl|Prokka|KKPKGGOH_14); gnlProkkaKKPKGGOH_15 (original name was: gnl|Prokka|KKPKGGOH_15); gnlProkkaKKPKGGOH_16 (original name was: gnl|Prokka|KKPKGGOH_16); gnlProkkaKKPKGGOH_17 (original name was: gnl|Prokka|KKPKGGOH_17); gnlProkkaKKPKGGOH_18 (original name was: gnl|Prokka|KKPKGGOH_18); gnlProkkaKKPKGGOH_19 (original name was: gnl|Prokka|KKPKGGOH_19); gnlProkkaKKPKGGOH_20 (original name was: gnl|Prokka|KKPKGGOH_20); gnlProkkaKKPKGGOH_21 (original name was: gnl|Prokka|KKPKGGOH_21); gnlProkkaKKPKGGOH_22 (original name was: gnl|Prokka|KKPKGGOH_22); gnlProkkaKKPKGGOH_23 (original name was: gnl|Prokka|KKPKGGOH_23); gnlProkkaKKPKGGOH_24 (original name was: gnl|Prokka|KKPKGGOH_24); gnlProkkaKKPKGGOH_25 (original name was: gnl|Prokka|KKPKGGOH_25); gnlProkkaKKPKGGOH_26 (original name was: gnl|Prokka|KKPKGGOH_26); gnlProkkaKKPKGGOH_27 (original name was: gnl|Prokka|KKPKGGOH_27); gnlProkkaKKPKGGOH_28 (original name was: gnl|Prokka|KKPKGGOH_28); gnlProkkaKKPKGGOH_29 (original name was: gnl|Prokka|KKPKGGOH_29); gnlProkkaKKPKGGOH_30 (original name was: gnl|Prokka|KKPKGGOH_30); gnlProkkaKKPKGGOH_31 (original name was: gnl|Prokka|KKPKGGOH_31); gnlProkkaKKPKGGOH_32 (original name was: gnl|Prokka|KKPKGGOH_32); gnlProkkaKKPKGGOH_33 (original name was: gnl|Prokka|KKPKGGOH_33); gnlProkkaKKPKGGOH_34 (original name was: gnl|Prokka|KKPKGGOH_34); gnlProkkaKKPKGGOH_35 (original name was: gnl|Prokka|KKPKGGOH_35); gnlProkkaKKPKGGOH_36 (original name was: gnl|Prokka|KKPKGGOH_36); gnlProkkaKKPKGGOH_37 (original name was: gnl|Prokka|KKPKGGOH_37); gnlProkkaKKPKGGOH_38 (original name was: gnl|Prokka|KKPKGGOH_38); gnlProkkaKKPKGGOH_39 (original name was: gnl|Prokka|KKPKGGOH_39); gnlProkkaKKPKGGOH_40 (original name was: gnl|Prokka|KKPKGGOH_40); gnlProkkaKKPKGGOH_41 (original name was: gnl|Prokka|KKPKGGOH_41); gnlProkkaKKPKGGOH_42 (original name was: gnl|Prokka|KKPKGGOH_42); gnlProkkaKKPKGGOH_43 (original name was: gnl|Prokka|KKPKGGOH_43); gnlProkkaKKPKGGOH_44 (original name was: gnl|Prokka|KKPKGGOH_44); gnlProkkaKKPKGGOH_45 (original name was: gnl|Prokka|KKPKGGOH_45); gnlProkkaKKPKGGOH_46 (original name was: gnl|Prokka|KKPKGGOH_46); gnlProkkaKKPKGGOH_47 (original name was: gnl|Prokka|KKPKGGOH_47); gnlProkkaKKPKGGOH_48 (original name was: gnl|Prokka|KKPKGGOH_48); gnlProkkaKKPKGGOH_49 (original name was: gnl|Prokka|KKPKGGOH_49); gnlProkkaKKPKGGOH_50 (original name was: gnl|Prokka|KKPKGGOH_50); gnlProkkaKKPKGGOH_51 (original name was: gnl|Prokka|KKPKGGOH_51); gnlProkkaKKPKGGOH_52 (original name was: gnl|Prokka|KKPKGGOH_52); gnlProkkaKKPKGGOH_53 (original name was: gnl|Prokka|KKPKGGOH_53); gnlProkkaKKPKGGOH_54 (original name was: gnl|Prokka|KKPKGGOH_54); gnlProkkaKKPKGGOH_55 (original name was: gnl|Prokka|KKPKGGOH_55); gnlProkkaKKPKGGOH_56 (original name was: gnl|Prokka|KKPKGGOH_56); gnlProkkaKKPKGGOH_57 (original name was: gnl|Prokka|KKPKGGOH_57); gnlProkkaKKPKGGOH_58 (original name was: gnl|Prokka|KKPKGGOH_58)

Compact view

gnlProkkaKKPKGGOH_2 - Region 1 - RRE-containing

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Location: 43,166 - 63,516 nt. (total: 20,351 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaKKPKGGOH_10 - Region 1 - arylpolyene

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Location: 10,260 - 58,042 nt. (total: 47,783 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg10_16

AMP-binding (56..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaKKPKGGOH_59 - Region 1 - RRE-containing

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Location: 97,931 - 118,215 nt. (total: 20,285 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.