QueryID	Family	Cluster	IsBegin	IsEnd	IrId	IrLen	Ngaps	OrfBegin	OrfEnd	Strand	OrfLen	Evalue	Type
CFGAMCAP_1	IS4	IS4_116	4210	5592	29	45	0	4253	5374	-	1122	3.3e-35	p
CFGAMCAP_1	IS66	IS66_393	102771	103281	13	15	0	102646	103366	+	721	2.9e-13	p
CFGAMCAP_1	IS66	IS66_43	103411	105134	25	39	0	103454	105007	+	1554	4.3e-56	c
CFGAMCAP_1	IS256	IS256_47	104998	106375	18	19	0	105101	106315	-	1215	1.1e-159	c
CFGAMCAP_1	IS66	IS66_46	106326	106589	0	0	0	106326	106589	+	264	2.8e-13	p
CFGAMCAP_1	IS4	IS4_148	115827	117048	33	42	1	115780	116952	-	1173	1.2e-120	c
CFGAMCAP_1	IS1182	IS1182_42	118710	120560	33	37	0	118779	120440	-	1662	5.1e-282	c
CFGAMCAP_1	IS66	IS66_43	141508	143496	16	20	0	141481	143046	-	1566	2.2e-61	c
CFGAMCAP_11	IS4	IS4_148	493306	494575	34	44	2	493637	494326	-	690	2.8e-55	c
CFGAMCAP_12	IS4	IS4_148	99792	100783	17	22	0	100149	100538	-	390	2.6e-30	p
CFGAMCAP_15	ISNCY	ISNCY_191	66712	68215	18	25	0	66915	67964	-	1050	1.1e-11	p
CFGAMCAP_16	IS110	IS110_113	88	536	11	12	0	1	617	-	617	3.3e-33	p
CFGAMCAP_19	IS66	IS66_393	56028	56904	20	27	0	56063	56802	+	740	3.7e-21	p
CFGAMCAP_19	IS66	IS66_43	56902	58715	34	50	1	56889	58454	+	1566	1.3e-59	c
CFGAMCAP_2	IS66	IS66_43	95298	97645	49	82	1	95312	97146	+	1835	6.5e-41	p
CFGAMCAP_21	IS982	IS982_260	10377	11468	25	27	0	10416	11324	-	909	2.5e-11	p
CFGAMCAP_21	IS1182	IS1182_71	11477	12195	23	34	0	11482	12051	-	570	3.6e-59	p
CFGAMCAP_24	IS110	IS110_219	42325	43054	20	26	1	42400	42918	+	519	3.7e-19	p
CFGAMCAP_28	IS982	IS982_263	1	1036	20	20	0	21	926	-	906	6.5e-89	c
CFGAMCAP_3	IS5	IS5_108	134971	136461	22	26	0	135098	136429	+	1332	1.6e-106	c
CFGAMCAP_33	IS66	IS66_78	235685	237262	16	16	0	235815	237227	+	1413	1.2e-73	c
CFGAMCAP_33	IS66	IS66_393	315147	315560	11	12	0	315223	315573	+	351	3.1e-13	p
CFGAMCAP_33	IS66	IS66_43	315644	317761	22	32	0	315655	317415	+	1761	9.1e-74	c
CFGAMCAP_33	IS1380	IS1380_109	336741	337725	16	21	0	336708	337707	-	1000	2.9e-65	p
CFGAMCAP_33	IS21	IS21_38	371296	373014	15	20	0	371410	373014	+	1605	3.7e-74	p
CFGAMCAP_33	IS21	IS21_259	372820	374281	25	33	1	373022	373798	+	777	7.4e-69	p
CFGAMCAP_41	IS66	IS66_43	126	1733	10	11	0	1	1791	+	1791	1.1e-73	p
CFGAMCAP_42	IS4	IS4_148	192453	193682	27	31	1	192686	193588	-	903	3.7e-86	c
CFGAMCAP_42	IS982	IS982_263	320129	320660	17	23	0	320200	320654	+	455	1.3e-21	p
CFGAMCAP_43	IS982	IS982_263	113952	115478	16	21	0	114343	115023	+	681	6.5e-74	c
CFGAMCAP_44	IS110	IS110_219	107409	108810	21	21	0	107502	108503	-	1002	2.6e-40	p
CFGAMCAP_44	IS110	IS110_113	287851	289363	37	43	1	288103	289257	-	1155	2.7e-37	p
CFGAMCAP_45	IS21	IS21_259	123723	125526	29	46	0	123983	125395	-	1413	2.6e-12	p
CFGAMCAP_45	IS5	IS5_197	129505	130431	46	68	1	129546	130302	-	757	5.9e-80	c
CFGAMCAP_5	IS110	IS110_219	107582	109362	18	24	0	107977	109050	+	1074	7.8e-39	p
CFGAMCAP_6	IS66	IS66_43	88862	91382	20	20	0	88942	91289	-	2348	1.1e-109	c
CFGAMCAP_8	IS1182	IS1182_71	5282	5865	31	48	1	5408	5794	-	387	7.2e-32	p
CFGAMCAP_9	ISAS1	ISAS1_192	15696	18157	27	38	0	15627	17697	+	2071	1.1e-93	c