GCA_020257205.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaMGIHAGFG_11 (original name was: gnl|Prokka|MGIHAGFG_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RRE-containing	144,490	164,840

gnlProkkaMGIHAGFG_45 (original name was: gnl|Prokka|MGIHAGFG_45)

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	RRE-containing	241,766	262,050

gnlProkkaMGIHAGFG_46 (original name was: gnl|Prokka|MGIHAGFG_46)

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	arylpolyene	6,011	53,793	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	RRE-containing	144,490	164,840
Region 45.1	RRE-containing	241,766	262,050
Region 46.1	arylpolyene	6,011	53,793	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaMGIHAGFG_1 (original name was: gnl|Prokka|MGIHAGFG_1); gnlProkkaMGIHAGFG_2 (original name was: gnl|Prokka|MGIHAGFG_2); gnlProkkaMGIHAGFG_3 (original name was: gnl|Prokka|MGIHAGFG_3); gnlProkkaMGIHAGFG_4 (original name was: gnl|Prokka|MGIHAGFG_4); gnlProkkaMGIHAGFG_5 (original name was: gnl|Prokka|MGIHAGFG_5); gnlProkkaMGIHAGFG_6 (original name was: gnl|Prokka|MGIHAGFG_6); gnlProkkaMGIHAGFG_7 (original name was: gnl|Prokka|MGIHAGFG_7); gnlProkkaMGIHAGFG_8 (original name was: gnl|Prokka|MGIHAGFG_8); gnlProkkaMGIHAGFG_9 (original name was: gnl|Prokka|MGIHAGFG_9); gnlProkkaMGIHAGFG_10 (original name was: gnl|Prokka|MGIHAGFG_10); gnlProkkaMGIHAGFG_12 (original name was: gnl|Prokka|MGIHAGFG_12); gnlProkkaMGIHAGFG_13 (original name was: gnl|Prokka|MGIHAGFG_13); gnlProkkaMGIHAGFG_14 (original name was: gnl|Prokka|MGIHAGFG_14); gnlProkkaMGIHAGFG_15 (original name was: gnl|Prokka|MGIHAGFG_15); gnlProkkaMGIHAGFG_16 (original name was: gnl|Prokka|MGIHAGFG_16); gnlProkkaMGIHAGFG_17 (original name was: gnl|Prokka|MGIHAGFG_17); gnlProkkaMGIHAGFG_18 (original name was: gnl|Prokka|MGIHAGFG_18); gnlProkkaMGIHAGFG_19 (original name was: gnl|Prokka|MGIHAGFG_19); gnlProkkaMGIHAGFG_20 (original name was: gnl|Prokka|MGIHAGFG_20); gnlProkkaMGIHAGFG_21 (original name was: gnl|Prokka|MGIHAGFG_21); gnlProkkaMGIHAGFG_22 (original name was: gnl|Prokka|MGIHAGFG_22); gnlProkkaMGIHAGFG_23 (original name was: gnl|Prokka|MGIHAGFG_23); gnlProkkaMGIHAGFG_24 (original name was: gnl|Prokka|MGIHAGFG_24); gnlProkkaMGIHAGFG_25 (original name was: gnl|Prokka|MGIHAGFG_25); gnlProkkaMGIHAGFG_26 (original name was: gnl|Prokka|MGIHAGFG_26); gnlProkkaMGIHAGFG_27 (original name was: gnl|Prokka|MGIHAGFG_27); gnlProkkaMGIHAGFG_28 (original name was: gnl|Prokka|MGIHAGFG_28); gnlProkkaMGIHAGFG_29 (original name was: gnl|Prokka|MGIHAGFG_29); gnlProkkaMGIHAGFG_30 (original name was: gnl|Prokka|MGIHAGFG_30); gnlProkkaMGIHAGFG_31 (original name was: gnl|Prokka|MGIHAGFG_31); gnlProkkaMGIHAGFG_32 (original name was: gnl|Prokka|MGIHAGFG_32); gnlProkkaMGIHAGFG_33 (original name was: gnl|Prokka|MGIHAGFG_33); gnlProkkaMGIHAGFG_34 (original name was: gnl|Prokka|MGIHAGFG_34); gnlProkkaMGIHAGFG_35 (original name was: gnl|Prokka|MGIHAGFG_35); gnlProkkaMGIHAGFG_36 (original name was: gnl|Prokka|MGIHAGFG_36); gnlProkkaMGIHAGFG_37 (original name was: gnl|Prokka|MGIHAGFG_37); gnlProkkaMGIHAGFG_38 (original name was: gnl|Prokka|MGIHAGFG_38); gnlProkkaMGIHAGFG_39 (original name was: gnl|Prokka|MGIHAGFG_39); gnlProkkaMGIHAGFG_40 (original name was: gnl|Prokka|MGIHAGFG_40); gnlProkkaMGIHAGFG_41 (original name was: gnl|Prokka|MGIHAGFG_41); gnlProkkaMGIHAGFG_42 (original name was: gnl|Prokka|MGIHAGFG_42); gnlProkkaMGIHAGFG_43 (original name was: gnl|Prokka|MGIHAGFG_43); gnlProkkaMGIHAGFG_44 (original name was: gnl|Prokka|MGIHAGFG_44); gnlProkkaMGIHAGFG_47 (original name was: gnl|Prokka|MGIHAGFG_47); gnlProkkaMGIHAGFG_48 (original name was: gnl|Prokka|MGIHAGFG_48); gnlProkkaMGIHAGFG_49 (original name was: gnl|Prokka|MGIHAGFG_49)

Compact view

gnlProkkaMGIHAGFG_11 - Region 1 - RRE-containing

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Location: 144,490 - 164,840 nt. (total: 20,351 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMGIHAGFG_45 - Region 1 - RRE-containing

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Location: 241,766 - 262,050 nt. (total: 20,285 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaMGIHAGFG_46 - Region 1 - arylpolyene

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Location: 6,011 - 53,793 nt. (total: 47,783 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg46_12

AMP-binding (55..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)