GCA_020522885.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaNDJLHOFJ_4 (original name was: gnl|Prokka|NDJLHOFJ_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	T3PKS	147,648	188,817

gnlProkkaNDJLHOFJ_7 (original name was: gnl|Prokka|NDJLHOFJ_7)

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	RiPP-like	66,986	79,136

gnlProkkaNDJLHOFJ_8 (original name was: gnl|Prokka|NDJLHOFJ_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	cyclic-lactone-autoinducer	108,765	129,361

gnlProkkaNDJLHOFJ_9 (original name was: gnl|Prokka|NDJLHOFJ_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	terpene	79,863	100,744

Region	Type	From	To	Similarity
Region 4.1	T3PKS	147,648	188,817
Region 7.1	RiPP-like	66,986	79,136
Region 8.1	cyclic-lactone-autoinducer	108,765	129,361
Region 9.1	terpene	79,863	100,744

No secondary metabolite regions were found in these records:: gnlProkkaNDJLHOFJ_1 (original name was: gnl|Prokka|NDJLHOFJ_1); gnlProkkaNDJLHOFJ_2 (original name was: gnl|Prokka|NDJLHOFJ_2); gnlProkkaNDJLHOFJ_3 (original name was: gnl|Prokka|NDJLHOFJ_3); gnlProkkaNDJLHOFJ_5 (original name was: gnl|Prokka|NDJLHOFJ_5); gnlProkkaNDJLHOFJ_6 (original name was: gnl|Prokka|NDJLHOFJ_6); gnlProkkaNDJLHOFJ_10 (original name was: gnl|Prokka|NDJLHOFJ_10); gnlProkkaNDJLHOFJ_11 (original name was: gnl|Prokka|NDJLHOFJ_11); gnlProkkaNDJLHOFJ_12 (original name was: gnl|Prokka|NDJLHOFJ_12); gnlProkkaNDJLHOFJ_13 (original name was: gnl|Prokka|NDJLHOFJ_13); gnlProkkaNDJLHOFJ_14 (original name was: gnl|Prokka|NDJLHOFJ_14); gnlProkkaNDJLHOFJ_15 (original name was: gnl|Prokka|NDJLHOFJ_15); gnlProkkaNDJLHOFJ_16 (original name was: gnl|Prokka|NDJLHOFJ_16); gnlProkkaNDJLHOFJ_17 (original name was: gnl|Prokka|NDJLHOFJ_17); gnlProkkaNDJLHOFJ_18 (original name was: gnl|Prokka|NDJLHOFJ_18); gnlProkkaNDJLHOFJ_19 (original name was: gnl|Prokka|NDJLHOFJ_19); gnlProkkaNDJLHOFJ_20 (original name was: gnl|Prokka|NDJLHOFJ_20); gnlProkkaNDJLHOFJ_21 (original name was: gnl|Prokka|NDJLHOFJ_21); gnlProkkaNDJLHOFJ_22 (original name was: gnl|Prokka|NDJLHOFJ_22); gnlProkkaNDJLHOFJ_23 (original name was: gnl|Prokka|NDJLHOFJ_23); gnlProkkaNDJLHOFJ_24 (original name was: gnl|Prokka|NDJLHOFJ_24); gnlProkkaNDJLHOFJ_25 (original name was: gnl|Prokka|NDJLHOFJ_25); gnlProkkaNDJLHOFJ_26 (original name was: gnl|Prokka|NDJLHOFJ_26); gnlProkkaNDJLHOFJ_27 (original name was: gnl|Prokka|NDJLHOFJ_27); gnlProkkaNDJLHOFJ_28 (original name was: gnl|Prokka|NDJLHOFJ_28); gnlProkkaNDJLHOFJ_29 (original name was: gnl|Prokka|NDJLHOFJ_29); gnlProkkaNDJLHOFJ_30 (original name was: gnl|Prokka|NDJLHOFJ_30); gnlProkkaNDJLHOFJ_31 (original name was: gnl|Prokka|NDJLHOFJ_31)

Compact view

gnlProkkaNDJLHOFJ_4 - Region 1 - T3PKS

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Location: 147,648 - 188,817 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNDJLHOFJ_7 - Region 1 - RiPP-like

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Location: 66,986 - 79,136 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNDJLHOFJ_8 - Region 1 - cyclic-lactone-autoinducer

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Location: 108,765 - 129,361 nt. (total: 20,597 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaNDJLHOFJ_9 - Region 1 - terpene

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Location: 79,863 - 100,744 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.