Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_020552095.1	Lactiplantibacillus plantarum	R77	SAMN22106563	2019-10	China:Zhejiang	-	0	0	0	2	2.00
2	GCA_020552285.1	Lactiplantibacillus plantarum	R46	SAMN22106557	2019-10	China:Zhejiang	-	0	0	0	2	2.00
3	GCA_020552405.1	Lactiplantibacillus plantarum	R35	SAMN22106555	2019-10	China:Zhejiang	-	0	0	0	2	2.00
4	GCA_020552425.1	Lactiplantibacillus plantarum	R106	SAMN22106554	2019-10	China:Zhejiang	-	0	0	0	2	2.00
5	GCA_020552435.1	Lactiplantibacillus plantarum	R105	SAMN22106553	2019-10	China:Zhejiang	-	0	0	0	2	2.00
6	GCA_020552065.1	Lactiplantibacillus plantarum	R75	SAMN22106562	2019-10	China:Zhejiang	-	1	0	0	2	2.00
7	GCA_020552075.1	Lactiplantibacillus plantarum	R98	SAMN22106565	2019-10	China:Zhejiang	-	1	0	0	2	2.00
8	GCA_020552215.1	Lactiplantibacillus plantarum	R58	SAMN22106560	2019-10	China:Zhejiang	-	1	0	0	2	2.00
9	GCA_020552235.1	Lactiplantibacillus plantarum	R49	SAMN22106559	2019-10	China:Zhejiang	-	1	0	0	2	2.00
10	GCA_020552325.1	Lactiplantibacillus plantarum	R39	SAMN22106556	2019-10	China:Zhejiang	-	1	0	0	2	2.00
11	GCA_020552445.1	Lactiplantibacillus plantarum	R102	SAMN22106552	2019-10	China:Zhejiang	-	1	0	0	2	2.00
12	GCA_032921125.1	Lactiplantibacillus plantarum	MSJK0068	SAMN37344192	2022-12	China: Hangzhou	-	4	0	0	1	1.00
13	GCA_020552045.1	Lactiplantibacillus plantarum	R95	SAMN22106564	2019-10	China:Zhejiang	-	120	0	0	2	2.00
14	GCA_020552185.1	Lactiplantibacillus plantarum	R62	SAMN22106561	2019-10	China:Zhejiang	-	120	0	0	2	2.00
15	GCA_003627355.1	Lactiplantibacillus plantarum	ZFM4	SAMN07303049	2005-03-01	China:Zhejiang maternal and child health hospital	Homo sapiens	202	0	0	1	1.00
16	GCA_049524635.1	Lactiplantibacillus plantarum	NG3-L4	SAMN43140309	2018-08-21	Japan: Nagano	-	206	0	0	2	2.00
17	GCA_049524735.1	Lactiplantibacillus plantarum	NG3-L1	SAMN43140307	2018-08-21	Japan: Nagano	-	206	0	0	2	2.00
18	GCA_001659745.1	Lactiplantibacillus plantarum	LZ206	SAMN05177792	2011-06	China: suburbs, Hangzhou	Bos taurus	211	0	0	1	1.00
19	GCA_000338115.2	Lactiplantibacillus plantarum ZJ316	ZJ316	SAMN02604341	-	-	Homo sapiens	222	0	0	1	1.00
20	GCA_030503695.1	Lactiplantibacillus plantarum	BC299	SAMN35791154	2011-01-01	China	-	226	0	0	1	1.00
21	GCA_047277305.1	Lactiplantibacillus plantarum	ZJ316PV	SAMN46300976	2024-01-10	China: Zhejiang	-	226	0	0	1	1.00
22	GCA_049524875.1	Lactiplantibacillus plantarum	KY6-L9	SAMN43140303	2018-05-29	Japan: Kyoto	-	227	0	0	2	2.00
23	GCA_049524915.1	Lactiplantibacillus plantarum	KY6-L8	SAMN43140302	2018-05-29	Japan: Kyoto	-	227	0	0	2	2.00
24	GCA_049524975.1	Lactiplantibacillus plantarum	KY6-L7	SAMN43140301	2018-05-29	Japan: Kyoto	-	227	0	0	2	2.00
25	GCA_026016545.1	Lactiplantibacillus plantarum	VHProbi P06	SAMN30526907	2021-01-25	China:Qingdao	Homo sapiens	235	0	0	1	1.00
26	GCA_009914095.1	Lactiplantibacillus plantarum	SRCM101167	SAMN08707601	2017-09-03	South Korea	-	252	0	0	1	1.00
27	GCA_018588605.2	Lactiplantibacillus plantarum subsp. plantarum	M19	SAMN17313505	2016	Iran	-	362	0	1	1	1.41
28	GCA_018784325.1	Lactiplantibacillus plantarum	MCC636	SAMN12147414	-	Ireland	Homo sapiens	372	0	0	2	2.00
29	GCA_029874465.1	Lactiplantibacillus plantarum	FME91	SAMN31669117	2019	Lebanon	-	372	0	1	2	2.24
30	GCA_048654445.1	Lactiplantibacillus plantarum	A13	SAMN46888397	2003-01-01	Turkey	-	375	0	0	2	2.00
31	GCA_048817855.1	Lactiplantibacillus plantarum	B3	SAMN46888398	2003-01-01	Turkey	-	375	0	0	2	2.00
32	GCA_048817875.1	Lactiplantibacillus plantarum	LA3	SAMN46888400	2007-01-01	Turkey	Homo sapiens	375	0	0	2	2.00
33	GCA_002751765.1	Lactiplantibacillus plantarum	RI-029	SAMN05717712	-	-	-	385	0	0	2	2.00
34	GCA_034321885.1	Lactiplantibacillus plantarum	D27	SAMN38704553	-	-	-	385	0	0	2	2.00
35	GCA_043951925.1	Lactiplantibacillus plantarum	LP3-4	SAMN44320424	2022-10	China:Hubei	-	387	0	0	2	2.00
36	GCA_049524755.1	Lactiplantibacillus plantarum	NG2-L3	SAMN43140306	2018-08-21	Japan: Nagano	-	390	0	0	2	2.00
37	GCA_049524795.1	Lactiplantibacillus plantarum	NG2-L2	SAMN43140305	2018-08-21	Japan: Nagano	-	390	0	0	2	2.00
38	GCA_049524855.1	Lactiplantibacillus plantarum	NG2-L1	SAMN43140304	2018-08-21	Japan: Nagano	-	393	0	0	2	2.00
39	GCA_049524395.1	Lactiplantibacillus plantarum	YG1-L1	SAMN43140315	2017-11-13	Japan: Yamagata	-	398	0	0	2	2.00
40	GCA_003258615.1	Lactiplantibacillus plantarum	EBKLp545	SAMN08828920	2016-06-30	South Korea	pig	399	0	0	2	2.00
41	GCA_009935675.1	Lactiplantibacillus plantarum	EBKLp545	SAMN07374818	2016-11-05	South Korea	-	399	0	0	2	2.00
42	GCA_026689375.1	Lactiplantibacillus plantarum	BC015	SAMN31882070	2019-12-01	China:Zhejiang	-	402	0	0	1	1.00
43	GCA_017580955.1	Lactiplantibacillus plantarum	WS1.1	SAMN13735609	2015-08	USA: California	-	403	0	0	2	2.00
44	GCA_049524375.1	Lactiplantibacillus plantarum	YG1-L2	SAMN43140316	2017-11-13	Japan: Yamagata	-	404	0	0	2	2.00
45	GCA_049525295.1	Lactiplantibacillus plantarum	KY4-L6	SAMN43140293	2018-07-17	Japan: Kyoto	-	404	0	0	2	2.00
46	GCA_049525335.1	Lactiplantibacillus plantarum	KY4-L3	SAMN43140292	2018-07-17	Japan: Kyoto	-	404	0	0	2	2.00
47	GCA_004101545.1	Lactiplantibacillus plantarum	SRCM103361	SAMN10743316	2018	South Korea	-	405	0	0	1	1.00
48	GCA_034929385.1	Lactiplantibacillus plantarum	R22	SAMN39101686	2022-08-27	China: Shandong	-	405	0	0	2	2.00
49	GCA_019038995.1	Lactiplantibacillus plantarum	QS7	SAMN19733975	2015-09-01	China: Meishan	-	406	0	0	2	2.00
50	GCA_019311695.1	Lactiplantibacillus plantarum	YT041	SAMN20132585	2020-10	China: Chengdu	-	406	0	0	2	2.00
51	GCA_047468855.1	Lactiplantibacillus plantarum	M95	SAMN46434682	2021-07-01	Egypt	-	406	0	0	2	2.00
52	GCA_018993285.1	Lactiplantibacillus plantarum	7.8.4	SAMN18937939	2009-05-20	USA: Mount Olive, NC	-	408	0	0	2	2.00
53	GCA_032190715.1	Lactiplantibacillus plantarum	7.8.4	SAMN37196899	2009-05	USA: Mount Olive, NC	-	408	0	0	1	1.00
54	GCA_018991195.2	Lactiplantibacillus plantarum	3.2.8	SAMN18935462	2009-05-20	USA: Mount Olive, NC	-	409	0	0	2	2.00
55	GCA_025245865.1	Lactiplantibacillus plantarum	SRCM210354	SAMN30618823	2020-09	South Korea:Namyangju	-	411	0	0	1	1.00
56	GCA_041147375.1	Lactiplantibacillus plantarum	7.2.2	SAMN42781994	2009-05	USA: Mount Olive, NC	-	411	0	0	2	2.00
57	GCA_000466905.3	Lactiplantibacillus plantarum 2025	2025	SAMN02298727	2011	Russia	-	414	0	0	1	1.00
58	GCA_017581045.1	Lactiplantibacillus plantarum	8.1	SAMN13735605	2014-09	Bulgaria	-	414	0	0	1	1.00
59	GCA_900289155.1	Lactiplantibacillus plantarum	CECT 8962	SAMEA104569287	2011	Argentina	-	414	1	0	2	2.24
60	GCA_900695425.1	Lactiplantibacillus plantarum	CECT 9434	SAMEA5333484	2011	Argentina	-	414	0	0	2	2.00
61	GCA_900700275.1	Lactiplantibacillus plantarum	CECT 9435	SAMEA5343125	2011	Argentina	-	414	0	0	2	2.00
62	GCA_018991855.1	Lactiplantibacillus plantarum	3.2.8	SAMN16675177	2009-05	USA: North Carolina	-	415	0	0	2	2.00
63	GCA_049524015.1	Lactiplantibacillus plantarum	YG1-L10	SAMN43140324	2017-11-13	Japan: Yamagata	-	424	0	0	2	2.00
64	GCA_049524055.1	Lactiplantibacillus plantarum	YG1-L9	SAMN43140323	2017-11-13	Japan: Yamagata	-	424	0	0	2	2.00
65	GCA_049524135.1	Lactiplantibacillus plantarum	YG1-L7	SAMN43140321	2017-11-13	Japan: Yamagata	-	424	0	0	2	2.00
66	GCA_049524155.1	Lactiplantibacillus plantarum	YG1-L8	SAMN43140322	2017-11-13	Japan: Yamagata	-	424	0	0	2	2.00
67	GCA_049524175.1	Lactiplantibacillus plantarum	YG1-L6	SAMN43140320	2017-11-13	Japan: Yamagata	-	424	0	0	2	2.00
68	GCA_049524255.1	Lactiplantibacillus plantarum	YG1-L5	SAMN43140319	2017-11-13	Japan: Yamagata	-	424	0	0	2	2.00
69	GCA_049524275.1	Lactiplantibacillus plantarum	YG1-L4	SAMN43140318	2017-11-13	Japan: Yamagata	-	424	0	0	2	2.00
70	GCA_049524295.1	Lactiplantibacillus plantarum	YG1-L3	SAMN43140317	2017-11-13	Japan: Yamagata	-	424	0	0	2	2.00
71	GCA_041344935.1	Lactiplantibacillus plantarum	HD02	SAMN43087440	2011-09-01	South Korea: Pyeongtaek	-	429	0	0	1	1.00
72	GCA_026127545.1	Lactiplantibacillus plantarum	LP24	SAMN21618489	2019-02-21	Italy: Cadorago, Sacco S.r.L.	-	433	0	0	2	2.00
73	GCA_026127565.1	Lactiplantibacillus plantarum	LP23	SAMN21618490	2019-02-21	Italy: Cadorago, Sacco S.r.L.	-	434	0	0	2	2.00
74	GCA_049524995.1	Lactiplantibacillus plantarum	KY6-L6	SAMN43140300	2018-05-29	Japan: Kyoto	-	435	0	0	2	2.00
75	GCA_049525035.1	Lactiplantibacillus plantarum	KY6-L5	SAMN43140299	2018-05-29	Japan: Kyoto	-	435	0	0	2	2.00
76	GCA_049525095.1	Lactiplantibacillus plantarum	KY6-L3	SAMN43140298	2018-05-29	Japan: Kyoto	-	435	0	0	2	2.00
77	GCA_049525115.1	Lactiplantibacillus plantarum	KY6-L2	SAMN43140297	2018-05-29	Japan: Kyoto	-	435	0	0	2	2.00
78	GCA_049525155.1	Lactiplantibacillus plantarum	KY6-L1	SAMN43140296	2018-05-29	Japan: Kyoto	-	437	0	0	2	2.00
79	GCA_042465735.1	Lactiplantibacillus plantarum	VHProbi P32	SAMN27162335	2021-01-25	China:Qingdao	Homo sapiens	439	0	0	1	1.00
80	GCA_030410355.1	Lactiplantibacillus plantarum	LM 0705	SAMN36084841	2015	Viet Nam: Son La	-	442	0	0	2	2.00
81	GCA_037283885.1	Lactiplantibacillus plantarum	A1376	SAMN35022403	-	Germany	-	442	0	0	1	1.00
82	GCA_049524415.1	Lactiplantibacillus plantarum	NG3-L9	SAMN43140314	2018-08-21	Japan: Nagano	-	444	0	0	2	2.00
83	GCA_049524495.1	Lactiplantibacillus plantarum	NG3-L8	SAMN43140313	2018-08-21	Japan: Nagano	-	444	0	0	2	2.00
84	GCA_049524515.1	Lactiplantibacillus plantarum	NG3-L7	SAMN43140312	2018-08-21	Japan: Nagano	-	444	0	0	2	2.00
85	GCA_049524535.1	Lactiplantibacillus plantarum	NG3-L6	SAMN43140311	2018-08-21	Japan: Nagano	-	444	0	0	2	2.00
86	GCA_049524615.1	Lactiplantibacillus plantarum	NG3-L5	SAMN43140310	2018-08-21	Japan: Nagano	-	444	0	0	2	2.00
87	GCA_029544305.1	Lactiplantibacillus plantarum	WUH3	SAMN26138622	2020-01-01	China: Wuhan	-	447	0	0	2	2.00
88	GCA_049524655.1	Lactiplantibacillus plantarum	NG3-L2	SAMN43140308	2018-08-21	Japan: Nagano	-	447	0	0	2	2.00
89	GCA_001660025.1	Lactiplantibacillus plantarum	LZ227	SAMN05162523	2011-06	China: suburbs, Hangzhou	Bos taurus	450	0	0	1	1.00
90	GCA_019879165.1	Lactiplantibacillus plantarum	LRCC5310	SAMN20981939	2015-09-28	South Korea	-	450	0	0	1	1.00
91	GCA_046097075.1	Lactiplantibacillus plantarum	LP104	SAMN44754175	2019-02-18	China:Wuhan	-	453	0	0	1	1.00
92	GCA_020552295.1	Lactiplantibacillus plantarum	R47	SAMN22106558	2019-10	China:Zhejiang	-	458	0	0	2	2.00
93	GCA_045010995.1	Lactiplantibacillus plantarum	PU3	SAMN33818264	2022-01-01	Bulgaria	Homo sapiens	483	0	0	1	1.00
94	GCA_021462365.1	Lactiplantibacillus plantarum	DY46	SAMN17703722	2020-08-19	Turkey: Adana	-	515	0	0	2	2.00
95	GCA_038321065.1	Lactiplantibacillus plantarum	TRA56	SAMN40733761	2022-11-26	Turkey: Mersin	-	515	0	0	2	2.00
96	GCA_004000705.1	Lactiplantibacillus plantarum	-	SAMD00143252	-	-	-	526	0	0	2	2.00
97	GCA_000410795.1	Lactiplantibacillus plantarum IPLA88	IPLA88	SAMN02470055	-	-	-	530	0	0	2	2.00
98	GCA_004141755.1	Lactiplantibacillus plantarum	SRCM103297	SAMN10849468	2018	South Korea	-	531	0	0	1	1.00
99	GCA_049525215.1	Lactiplantibacillus plantarum	KY4-L9	SAMN43140295	2018-07-17	Japan: Kyoto	-	532	0	0	2	2.00
100	GCA_002220815.1	Lactiplantibacillus plantarum	GB-LP1	SAMN06622701	-	South Korea	-	533	0	0	1	1.00