GCA_020552525.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFCFMLKLH_5 (original name was: gnl|Prokka|FCFMLKLH_5)

Region	Type	From	To	Most similar known cluster		Similarity
Region 5.1	RiPP-like	58,155	70,305

gnlProkkaFCFMLKLH_8 (original name was: gnl|Prokka|FCFMLKLH_8)

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	114,536	155,705

gnlProkkaFCFMLKLH_9 (original name was: gnl|Prokka|FCFMLKLH_9)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	terpene	103,023	123,904

gnlProkkaFCFMLKLH_13 (original name was: gnl|Prokka|FCFMLKLH_13)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	cyclic-lactone-autoinducer	42,641	63,352

Region	Type	From	To	Similarity
Region 5.1	RiPP-like	58,155	70,305
Region 8.1	T3PKS	114,536	155,705
Region 9.1	terpene	103,023	123,904
Region 13.1	cyclic-lactone-autoinducer	42,641	63,352

No secondary metabolite regions were found in these records:: gnlProkkaFCFMLKLH_1 (original name was: gnl|Prokka|FCFMLKLH_1); gnlProkkaFCFMLKLH_2 (original name was: gnl|Prokka|FCFMLKLH_2); gnlProkkaFCFMLKLH_3 (original name was: gnl|Prokka|FCFMLKLH_3); gnlProkkaFCFMLKLH_4 (original name was: gnl|Prokka|FCFMLKLH_4); gnlProkkaFCFMLKLH_6 (original name was: gnl|Prokka|FCFMLKLH_6); gnlProkkaFCFMLKLH_7 (original name was: gnl|Prokka|FCFMLKLH_7); gnlProkkaFCFMLKLH_10 (original name was: gnl|Prokka|FCFMLKLH_10); gnlProkkaFCFMLKLH_11 (original name was: gnl|Prokka|FCFMLKLH_11); gnlProkkaFCFMLKLH_12 (original name was: gnl|Prokka|FCFMLKLH_12); gnlProkkaFCFMLKLH_14 (original name was: gnl|Prokka|FCFMLKLH_14); gnlProkkaFCFMLKLH_15 (original name was: gnl|Prokka|FCFMLKLH_15); gnlProkkaFCFMLKLH_16 (original name was: gnl|Prokka|FCFMLKLH_16); gnlProkkaFCFMLKLH_17 (original name was: gnl|Prokka|FCFMLKLH_17); gnlProkkaFCFMLKLH_18 (original name was: gnl|Prokka|FCFMLKLH_18); gnlProkkaFCFMLKLH_19 (original name was: gnl|Prokka|FCFMLKLH_19); gnlProkkaFCFMLKLH_20 (original name was: gnl|Prokka|FCFMLKLH_20); gnlProkkaFCFMLKLH_21 (original name was: gnl|Prokka|FCFMLKLH_21); gnlProkkaFCFMLKLH_22 (original name was: gnl|Prokka|FCFMLKLH_22); gnlProkkaFCFMLKLH_23 (original name was: gnl|Prokka|FCFMLKLH_23); gnlProkkaFCFMLKLH_24 (original name was: gnl|Prokka|FCFMLKLH_24); gnlProkkaFCFMLKLH_25 (original name was: gnl|Prokka|FCFMLKLH_25); gnlProkkaFCFMLKLH_26 (original name was: gnl|Prokka|FCFMLKLH_26); gnlProkkaFCFMLKLH_28 (original name was: gnl|Prokka|FCFMLKLH_28); gnlProkkaFCFMLKLH_29 (original name was: gnl|Prokka|FCFMLKLH_29); gnlProkkaFCFMLKLH_30 (original name was: gnl|Prokka|FCFMLKLH_30); gnlProkkaFCFMLKLH_31 (original name was: gnl|Prokka|FCFMLKLH_31); gnlProkkaFCFMLKLH_33 (original name was: gnl|Prokka|FCFMLKLH_33); gnlProkkaFCFMLKLH_34 (original name was: gnl|Prokka|FCFMLKLH_34); gnlProkkaFCFMLKLH_35 (original name was: gnl|Prokka|FCFMLKLH_35); gnlProkkaFCFMLKLH_36 (original name was: gnl|Prokka|FCFMLKLH_36); gnlProkkaFCFMLKLH_38 (original name was: gnl|Prokka|FCFMLKLH_38); gnlProkkaFCFMLKLH_39 (original name was: gnl|Prokka|FCFMLKLH_39); gnlProkkaFCFMLKLH_41 (original name was: gnl|Prokka|FCFMLKLH_41); gnlProkkaFCFMLKLH_42 (original name was: gnl|Prokka|FCFMLKLH_42); gnlProkkaFCFMLKLH_44 (original name was: gnl|Prokka|FCFMLKLH_44); gnlProkkaFCFMLKLH_45 (original name was: gnl|Prokka|FCFMLKLH_45); gnlProkkaFCFMLKLH_47 (original name was: gnl|Prokka|FCFMLKLH_47); gnlProkkaFCFMLKLH_50 (original name was: gnl|Prokka|FCFMLKLH_50); gnlProkkaFCFMLKLH_51 (original name was: gnl|Prokka|FCFMLKLH_51); gnlProkkaFCFMLKLH_56 (original name was: gnl|Prokka|FCFMLKLH_56); gnlProkkaFCFMLKLH_60 (original name was: gnl|Prokka|FCFMLKLH_60); gnlProkkaFCFMLKLH_61 (original name was: gnl|Prokka|FCFMLKLH_61); gnlProkkaFCFMLKLH_62 (original name was: gnl|Prokka|FCFMLKLH_62)

Compact view

gnlProkkaFCFMLKLH_5 - Region 1 - RiPP-like

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Location: 58,155 - 70,305 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFCFMLKLH_8 - Region 1 - T3PKS

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Location: 114,536 - 155,705 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFCFMLKLH_9 - Region 1 - terpene

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Location: 103,023 - 123,904 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFCFMLKLH_13 - Region 1 - cyclic-lactone-autoinducer

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Location: 42,641 - 63,352 nt. (total: 20,712 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.