Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_020785095.1	Limosilactobacillus reuteri	LTM_Jesus_1_1	SAMN22258625	2014-02	USA:California	Lion-tailed Macaque	0	0	0	1	1.00
2	GCA_020785035.1	Limosilactobacillus reuteri	LTM_Jesus_5_1	SAMN22258626	2014-02	USA:California	Lion-tailed Macaque	476	0	0	1	1.00
3	GCA_020785115.1	Limosilactobacillus reuteri	BHM_Lincecum_1_1	SAMN22258621	2014-02	USA:California	Black Howler Monkey	518	0	0	1	1.00
4	GCA_030262475.1	Limosilactobacillus reuteri	BIO7251	SAMN35621297	2021-01	France	-	578	0	0	1	1.00
5	GCA_020784255.1	Limosilactobacillus reuteri	2A	SAMN22258665	2015	Canada:Calgary	Porqupine	597	0	0	1	1.00
6	GCA_020784595.1	Limosilactobacillus reuteri	C4	SAMN22258648	2015	Canada:Vancouver	Capy C	601	0	0	1	1.00
7	GCA_020784605.1	Limosilactobacillus reuteri	C3	SAMN22258647	2015	Canada:Vancouver	Capy C	601	0	0	1	1.00
8	GCA_020784455.1	Limosilactobacillus reuteri	FUA 3048	SAMN22258655	2005	Canada:Edmonton	Rat	604	0	0	1	1.00
9	GCA_003703885.1	Limosilactobacillus reuteri	2010	SAMN08615538	-	-	rat	620	1	0	1	1.41
10	GCA_004684995.1	Limosilactobacillus reuteri	I8-5	SAMN11294217	2017	USA: San Francisco	Mus musculus	621	0	0	1	1.00
11	GCA_030226325.1	Limosilactobacillus reuteri	UMB5704	SAMN34998689	2019-10	USA: Maywood, IL	Homo sapiens	622	0	0	1	1.00
12	GCA_020784355.1	Limosilactobacillus reuteri	S_1_1	SAMN22258659	2014-02	USA:Nebraska	Springhaas	646	0	0	1	1.00
13	GCA_020784395.1	Limosilactobacillus reuteri	S_9_1	SAMN22258661	2014-02	USA:Nebraska	Springhaas	646	0	0	1	1.00
14	GCA_020784415.1	Limosilactobacillus reuteri	S_5_1	SAMN22258660	2014-02	USA:Nebraska	Springhaas	646	0	0	1	1.00
15	GCA_020784795.1	Limosilactobacillus reuteri	apa71	SAMN22258639	-	Sweden	Monkey	646	1	0	1	1.41
16	GCA_020784555.1	Limosilactobacillus reuteri	D.l.1-B	SAMN22258650	2015	Canada:Edmonton	Dasyprocta leporina	648	0	0	1	1.00
17	GCA_020784575.1	Limosilactobacillus reuteri	C.p.1-C	SAMN22258649	2015	Canada:Edmonton	Coendou prehensilis	648	0	0	1	1.00
18	GCA_020784635.1	Limosilactobacillus reuteri	D.l.3-A	SAMN22258651	2015	Canada:Edmonton	Dasyprocta leporina	648	0	0	1	1.00
19	GCA_020784895.1	Limosilactobacillus reuteri	PM_Patrick_2_1	SAMN22258634	2014-02	USA:California	Patas monkey	648	0	0	1	1.00
20	GCA_020785255.1	Limosilactobacillus reuteri	PNG008C_M	SAMN22258614	2015-03	Papua New Guinea	Homo sapiens	651	0	0	1	1.00
21	GCA_020785325.1	Limosilactobacillus reuteri	PNG008A_M	SAMN22258612	2015-03	Papua New Guinea	Homo sapiens	651	0	0	1	1.00
22	GCA_020785335.1	Limosilactobacillus reuteri	PNG008_ANA	SAMN22258611	2015-03	Papua New Guinea	Homo sapiens	651	0	0	1	1.00
23	GCA_020785355.1	Limosilactobacillus reuteri	PB-W1	SAMN22258610	2015-03	Papua New Guinea	Homo sapiens	651	0	0	1	1.00
24	GCA_020785415.1	Limosilactobacillus reuteri	PNG008_48h	SAMN22258609	2015-03	Papua New Guinea	Homo sapiens	651	0	0	1	1.00
25	GCA_020785475.1	Limosilactobacillus reuteri	PNG008_24h	SAMN22258608	2015-03	Papua New Guinea	Homo sapiens	651	0	0	1	1.00
26	GCA_020785015.1	Limosilactobacillus reuteri	LTM_Sauna_1_1	SAMN22258627	2014-02	USA:California	Lion-tailed Macaque	652	0	0	1	1.00
27	GCA_020785635.1	Limosilactobacillus reuteri	Cor137_1_1	SAMN22258596	2013-10	-	Amaru Indians	665	0	0	1	1.00
28	GCA_020785735.1	Limosilactobacillus reuteri	Cor137_3_1	SAMN22258597	2013-10	-	Amaru Indians	665	0	0	1	1.00
29	GCA_036430905.1	Limosilactobacillus reuteri	FI11596	SAMN33193073	2018-01	Ghana:Mankessim	-	676	0	0	1	1.00
30	GCA_036430925.1	Limosilactobacillus reuteri	FI11605	SAMN33193074	2018-01	Ghana:Accra	-	676	0	0	1	1.00
31	GCA_036430965.1	Limosilactobacillus reuteri	FI11586	SAMN33193071	2018-01	Ghana:Sunyani	-	676	0	0	1	1.00
32	GCA_036430985.1	Limosilactobacillus reuteri	FI11571	SAMN33193075	2018-01	Ghana:Dodowa	-	676	0	0	1	1.00
33	GCA_036431085.1	Limosilactobacillus reuteri	FI11589	SAMN33193067	2018-01	Ghana:Sunyani	-	676	0	0	1	1.00
34	GCA_036431965.1	Limosilactobacillus reuteri	LMAN-Sda	SAMN35624265	2018-01	Ghana	-	676	0	0	1	1.00
35	GCA_036431005.1	Limosilactobacillus reuteri	FI11625	SAMN33193070	2018-01	Ghana:Mankessim	-	677	0	0	1	1.00
36	GCA_011009765.1	Limosilactobacillus reuteri	D4	SAMN10822529	2017	United Kingdom	Meles meles	678	1	0	1	1.41
37	GCA_020784805.1	Limosilactobacillus reuteri	PM_Patrick_6_1	SAMN22258636	2014-02	USA:California	Patas monkey	678	0	0	1	1.00
38	GCA_036431025.1	Limosilactobacillus reuteri	FI11606	SAMN33193068	2018-01	Ghana:Accra	-	678	0	0	1	1.00
39	GCA_020784875.1	Limosilactobacillus reuteri	PM_Patrick_1_1	SAMN22258635	2014-02	USA:California	Patas monkey	679	0	0	1	1.00
40	GCA_036323925.1	Limosilactobacillus reuteri	LRA7	SAMN39585552	2022-07-20	China	dog	679	2	0	0	2.00
41	GCA_036432025.1	Limosilactobacillus reuteri	LSUN-24e	SAMN35624266	2018-01	Ghana	-	679	0	0	1	1.00
42	GCA_020785145.1	Limosilactobacillus reuteri	BHM_Thaddeus_2_1	SAMN22258623	2014-02	USA:California	Black Howler Monkey	680	0	0	1	1.00
43	GCA_046763525.1	Limosilactobacillus reuteri	NCDC958	SAMN46209980	2018-01-08	India	-	680	0	0	0	0.00
44	GCA_000758185.1	Limosilactobacillus reuteri	LTH5448	SAMN02869572	1998	Germany	-	681	0	0	1	1.00
45	GCA_020784295.1	Limosilactobacillus reuteri	M_2	SAMN22258662	-	Japan	Mouse	681	0	0	1	1.00
46	GCA_020784305.1	Limosilactobacillus reuteri	M_20	SAMN22258663	-	Japan	Mouse	681	0	0	1	1.00
47	GCA_003174945.1	Limosilactobacillus reuteri	LR13	SAMN08934320	2016	China	cow	682	0	0	1	1.00
48	GCA_003174955.1	Limosilactobacillus reuteri	LR14	SAMN08934312	2016	China	goat	682	0	0	1	1.00
49	GCA_003174995.1	Limosilactobacillus reuteri	LR11	SAMN08934311	2016	China	goat	682	0	0	1	1.00
50	GCA_003175015.1	Limosilactobacillus reuteri	LR2	SAMN08934309	2016	China	goat	682	0	0	1	1.00
51	GCA_003175125.1	Limosilactobacillus reuteri	LR1	SAMN08934308	2016	China	goat	682	0	0	1	1.00
52	GCA_018884225.1	Limosilactobacillus reuteri	YLR001	SAMN16987598	2019-06	China: Qinghai Province	Yak	682	0	0	0	0.00
53	GCA_025189625.1	Limosilactobacillus reuteri	CIRM-BIA 2122	SAMN10365501	1993	-	-	682	0	0	1	1.00
54	GCA_025189645.1	Limosilactobacillus reuteri	CIRM-BIA 1439	SAMN10365500	1993	-	-	682	0	0	1	1.00
55	GCA_036432135.1	Limosilactobacillus reuteri	LTAD-12f	SAMN35624259	2018-01	Ghana	-	682	0	0	1	1.00
56	GCA_003174815.1	Limosilactobacillus reuteri	LR18	SAMN08934322	2016	China	horse	683	0	0	1	1.00
57	GCA_003174855.1	Limosilactobacillus reuteri	LR4	SAMN08934317	2016	China	cow	683	0	0	1	1.00
58	GCA_003174915.1	Limosilactobacillus reuteri	LR17	SAMN08934321	2016	China	horse	683	0	0	1	1.00
59	GCA_003174935.1	Limosilactobacillus reuteri	LR3	SAMN08934310	2016	China	goat	683	0	0	1	1.00
60	GCA_003175025.1	Limosilactobacillus reuteri	LR19	SAMN08934323	2016	China	horse	683	0	0	1	1.00
61	GCA_003175075.1	Limosilactobacillus reuteri	LR10	SAMN08934318	2016	China	cow	683	0	0	1	1.00
62	GCA_007280535.1	Limosilactobacillus reuteri	BIO5454	SAMN12284778	-	-	-	683	0	0	1	1.00
63	GCA_009649475.1	Limosilactobacillus reuteri	N2J	SAMN13186404	-	-	rat	683	0	0	1	1.00
64	GCA_009649605.1	Limosilactobacillus reuteri	N4I	SAMN13186405	-	-	rat	683	0	0	1	1.00
65	GCA_025189725.1	Limosilactobacillus reuteri	CIRM-BIA 911	SAMN10365496	1993	France	-	683	1	0	1	1.41
66	GCA_025189745.1	Limosilactobacillus reuteri	CIRM-BIA 1534	SAMN10365495	1980	France	-	683	0	0	1	1.00
67	GCA_025189765.1	Limosilactobacillus reuteri	CIRM-BIA 929	SAMN10365494	1980	France	-	683	0	0	1	1.00
68	GCA_033181025.1	Limosilactobacillus reuteri	RGW1	SAMN30465350	2017-07-20	China: Zhejiang	bovine	683	4	0	1	4.12
69	GCA_040785065.1	Limosilactobacillus reuteri	gbc_i	SAMN41082104	2021	USA: Glendale, Arizona	-	683	0	0	1	1.00
70	GCA_003053005.1	Limosilactobacillus reuteri	DS12_10	SAMN05942019	2016-03-06	USA:MD	Homo sapiens	684	0	0	1	1.00
71	GCA_003174865.1	Limosilactobacillus reuteri	LR9	SAMN08934316	2016	China	sheep	684	0	0	1	1.00
72	GCA_028462605.1	Limosilactobacillus reuteri	92071	SAMN32886977	2015-01-15	Germany: Kiel	-	684	1	0	1	1.41
73	GCA_034424825.1	Limosilactobacillus reuteri	C4	SAMN38757438	1992-06-12	South Africa	Sus scrofa domesticus	684	1	0	1	1.41
74	GCA_042464795.1	Limosilactobacillus reuteri	LDHa	SAMN43886048	2023-09-01	China:Guangzhou	-	684	0	0	0	0.00
75	GCA_042464815.1	Limosilactobacillus reuteri	LSHe	SAMN43882269	2023-09-01	China:Guangzhou	-	684	0	0	0	0.00
76	GCA_002128525.1	Limosilactobacillus reuteri	KLR1004	SAMN05751482	2006-06-20	South Korea	pig	685	10	0	1	10.05
77	GCA_003174875.1	Limosilactobacillus reuteri	LR8	SAMN08934315	2016	China	sheep	685	0	0	1	1.00
78	GCA_020023755.1	Limosilactobacillus reuteri	SD-RD830-FR	SAMN19814905	2020-01-01	France	Homo sapiens	685	0	0	0	0.00
79	GCA_020785545.1	Limosilactobacillus reuteri	SR14	SAMN22258601	2008	Ireland:Cork	Homo sapiens	685	0	0	1	1.00
80	GCA_020785595.1	Limosilactobacillus reuteri	SR11	SAMN22258600	2008	Ireland:Cork	Homo sapiens	685	0	0	1	1.00
81	GCA_020785655.1	Limosilactobacillus reuteri	Cor124_1_1	SAMN22258595	2013-10	-	Amaru Indians	685	0	0	1	1.00
82	GCA_022642805.1	Limosilactobacillus reuteri	L8	SAMN14239247	2016	Canada: Edmonton	Bos taurus	685	1	0	0	1.00
83	GCA_046937645.1	Limosilactobacillus reuteri subsp. suis	M981A	SAMN35847972	2019	Czech Republic	domestic pig	685	2	0	1	2.24
84	GCA_000168255.1	Limosilactobacillus reuteri subsp. rodentium	100-23	SAMN00623049	-	-	-	686	0	0	0	0.00
85	GCA_000712565.2	Limosilactobacillus reuteri	TMW1.656	SAMN02869563	1998	Germany	-	686	0	0	1	1.00
86	GCA_003703875.1	Limosilactobacillus reuteri	R2lc	SAMN08565493	-	-	rat	686	0	0	1	1.00
87	GCA_013348825.1	Limosilactobacillus reuteri	AN417	SAMN15162791	2016-05-03	South Korea:Jeollabuk-do, Gimje-si	Sus scrofa domesticus	686	2	0	0	2.00
88	GCA_022586935.1	Limosilactobacillus reuteri	PB2	SAMN26510415	2021-10-07	Canada: London Ontario	-	686	0	0	1	1.00
89	GCA_023896335.1	Limosilactobacillus reuteri	PH-3	SAMN28100809	2022-03	Russia	-	686	0	0	1	1.00
90	GCA_025189665.1	Limosilactobacillus reuteri	CIRM-BIA 696	SAMN10365499	1972	France	-	686	0	0	1	1.00
91	GCA_026183435.1	Limosilactobacillus reuteri	BRD_L17	SAMN31580343	2022-08-12	South Korea:Kyungki	Canis lupus familiaris mixed breed	686	0	0	0	0.00
92	GCA_030345055.1	Limosilactobacillus reuteri	M1	SAMN35728319	2021-01-14	China: No. 135, Xingang Xi Road, Guangzhou	mice	686	0	0	0	0.00
93	GCA_000236455.2	Limosilactobacillus reuteri subsp. suis	ATCC 53608	SAMEA2272605	-	-	-	687	0	0	0	0.00
94	GCA_001703935.1	Limosilactobacillus reuteri	484_39	SAMN05371506	2015	Israel: Tel-Hashomer	Mus musculus	687	0	0	1	1.00
95	GCA_002027295.1	Limosilactobacillus reuteri	CECT8605	SAMN06473517	-	Spain	Bos taurus	687	0	0	1	1.00
96	GCA_002128615.1	Limosilactobacillus reuteri	KLR3002	SAMN05751492	2015-05-06	South Korea	pig	687	2	0	1	2.24
97	GCA_022509245.1	Limosilactobacillus reuteri	QAULRN18	SAMN20114178	2018-01-01/2021-01-01	Pakistan: Islamabad	-	687	0	0	1	1.00
98	GCA_025369755.1	Limosilactobacillus reuteri	AM_LB1	SAMN30836479	2019	USA: Georgia	Gallus gallus	687	0	0	0	0.00
99	GCA_036621875.1	Limosilactobacillus reuteri	lp167-67	SAMEA3220430	-	-	-	687	1	0	1	1.41
100	GCA_046937655.1	Limosilactobacillus reuteri subsp. suis	M984A	SAMN35847973	2019	Czech Republic	domestic pig	687	3	0	1	3.16