GCA_020844675.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaOAIPIMPA_33 (original name was: gnl|Prokka|OAIPIMPA_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 3.1	RiPP-like	64,760	76,352

gnlProkkaOAIPIMPA_52 (original name was: gnl|Prokka|OAIPIMPA_52)

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	567,768	608,937

gnlProkkaOAIPIMPA_107 (original name was: gnl|Prokka|OAIPIMPA_107)

Region	Type	From	To	Most similar known cluster		Similarity
Region 66.1	terpene	24,790	45,671

gnlProkkaOAIPIMPA_129 (original name was: gnl|Prokka|OAIPIMPA_129)

Region	Type	From	To	Most similar known cluster		Similarity
Region 69.1	cyclic-lactone-autoinducer	122,531	136,513

Region	Type	From	To	Similarity
Region 3.1	RiPP-like	64,760	76,352
Region 11.1	T3PKS	567,768	608,937
Region 66.1	terpene	24,790	45,671
Region 69.1	cyclic-lactone-autoinducer	122,531	136,513

No secondary metabolite regions were found in these records:: gnlProkkaOAIPIMPA_11 (original name was: gnl|Prokka|OAIPIMPA_11); gnlProkkaOAIPIMPA_22 (original name was: gnl|Prokka|OAIPIMPA_22); gnlProkkaOAIPIMPA_44 (original name was: gnl|Prokka|OAIPIMPA_44); gnlProkkaOAIPIMPA_46 (original name was: gnl|Prokka|OAIPIMPA_46); gnlProkkaOAIPIMPA_47 (original name was: gnl|Prokka|OAIPIMPA_47); gnlProkkaOAIPIMPA_48 (original name was: gnl|Prokka|OAIPIMPA_48); gnlProkkaOAIPIMPA_49 (original name was: gnl|Prokka|OAIPIMPA_49); gnlProkkaOAIPIMPA_50 (original name was: gnl|Prokka|OAIPIMPA_50); gnlProkkaOAIPIMPA_51 (original name was: gnl|Prokka|OAIPIMPA_51); gnlProkkaOAIPIMPA_53 (original name was: gnl|Prokka|OAIPIMPA_53); gnlProkkaOAIPIMPA_54 (original name was: gnl|Prokka|OAIPIMPA_54); gnlProkkaOAIPIMPA_55 (original name was: gnl|Prokka|OAIPIMPA_55); gnlProkkaOAIPIMPA_56 (original name was: gnl|Prokka|OAIPIMPA_56); gnlProkkaOAIPIMPA_57 (original name was: gnl|Prokka|OAIPIMPA_57); gnlProkkaOAIPIMPA_58 (original name was: gnl|Prokka|OAIPIMPA_58); gnlProkkaOAIPIMPA_59 (original name was: gnl|Prokka|OAIPIMPA_59); gnlProkkaOAIPIMPA_60 (original name was: gnl|Prokka|OAIPIMPA_60); gnlProkkaOAIPIMPA_61 (original name was: gnl|Prokka|OAIPIMPA_61); gnlProkkaOAIPIMPA_62 (original name was: gnl|Prokka|OAIPIMPA_62); gnlProkkaOAIPIMPA_63 (original name was: gnl|Prokka|OAIPIMPA_63); gnlProkkaOAIPIMPA_64 (original name was: gnl|Prokka|OAIPIMPA_64); gnlProkkaOAIPIMPA_65 (original name was: gnl|Prokka|OAIPIMPA_65); gnlProkkaOAIPIMPA_66 (original name was: gnl|Prokka|OAIPIMPA_66); gnlProkkaOAIPIMPA_67 (original name was: gnl|Prokka|OAIPIMPA_67); gnlProkkaOAIPIMPA_68 (original name was: gnl|Prokka|OAIPIMPA_68); gnlProkkaOAIPIMPA_69 (original name was: gnl|Prokka|OAIPIMPA_69); gnlProkkaOAIPIMPA_70 (original name was: gnl|Prokka|OAIPIMPA_70); gnlProkkaOAIPIMPA_71 (original name was: gnl|Prokka|OAIPIMPA_71); gnlProkkaOAIPIMPA_72 (original name was: gnl|Prokka|OAIPIMPA_72); gnlProkkaOAIPIMPA_73 (original name was: gnl|Prokka|OAIPIMPA_73); gnlProkkaOAIPIMPA_74 (original name was: gnl|Prokka|OAIPIMPA_74); gnlProkkaOAIPIMPA_75 (original name was: gnl|Prokka|OAIPIMPA_75); gnlProkkaOAIPIMPA_76 (original name was: gnl|Prokka|OAIPIMPA_76); gnlProkkaOAIPIMPA_77 (original name was: gnl|Prokka|OAIPIMPA_77); gnlProkkaOAIPIMPA_78 (original name was: gnl|Prokka|OAIPIMPA_78); gnlProkkaOAIPIMPA_79 (original name was: gnl|Prokka|OAIPIMPA_79); gnlProkkaOAIPIMPA_80 (original name was: gnl|Prokka|OAIPIMPA_80); gnlProkkaOAIPIMPA_81 (original name was: gnl|Prokka|OAIPIMPA_81); gnlProkkaOAIPIMPA_82 (original name was: gnl|Prokka|OAIPIMPA_82); gnlProkkaOAIPIMPA_83 (original name was: gnl|Prokka|OAIPIMPA_83); gnlProkkaOAIPIMPA_84 (original name was: gnl|Prokka|OAIPIMPA_84); gnlProkkaOAIPIMPA_85 (original name was: gnl|Prokka|OAIPIMPA_85); gnlProkkaOAIPIMPA_86 (original name was: gnl|Prokka|OAIPIMPA_86); gnlProkkaOAIPIMPA_87 (original name was: gnl|Prokka|OAIPIMPA_87); gnlProkkaOAIPIMPA_88 (original name was: gnl|Prokka|OAIPIMPA_88); gnlProkkaOAIPIMPA_89 (original name was: gnl|Prokka|OAIPIMPA_89); gnlProkkaOAIPIMPA_90 (original name was: gnl|Prokka|OAIPIMPA_90); gnlProkkaOAIPIMPA_91 (original name was: gnl|Prokka|OAIPIMPA_91); gnlProkkaOAIPIMPA_92 (original name was: gnl|Prokka|OAIPIMPA_92); gnlProkkaOAIPIMPA_93 (original name was: gnl|Prokka|OAIPIMPA_93); gnlProkkaOAIPIMPA_94 (original name was: gnl|Prokka|OAIPIMPA_94); gnlProkkaOAIPIMPA_95 (original name was: gnl|Prokka|OAIPIMPA_95); gnlProkkaOAIPIMPA_96 (original name was: gnl|Prokka|OAIPIMPA_96); gnlProkkaOAIPIMPA_97 (original name was: gnl|Prokka|OAIPIMPA_97); gnlProkkaOAIPIMPA_98 (original name was: gnl|Prokka|OAIPIMPA_98); gnlProkkaOAIPIMPA_99 (original name was: gnl|Prokka|OAIPIMPA_99); gnlProkkaOAIPIMPA_100 (original name was: gnl|Prokka|OAIPIMPA_100); gnlProkkaOAIPIMPA_101 (original name was: gnl|Prokka|OAIPIMPA_101); gnlProkkaOAIPIMPA_102 (original name was: gnl|Prokka|OAIPIMPA_102); gnlProkkaOAIPIMPA_103 (original name was: gnl|Prokka|OAIPIMPA_103); gnlProkkaOAIPIMPA_104 (original name was: gnl|Prokka|OAIPIMPA_104); gnlProkkaOAIPIMPA_105 (original name was: gnl|Prokka|OAIPIMPA_105); gnlProkkaOAIPIMPA_106 (original name was: gnl|Prokka|OAIPIMPA_106); gnlProkkaOAIPIMPA_108 (original name was: gnl|Prokka|OAIPIMPA_108); gnlProkkaOAIPIMPA_118 (original name was: gnl|Prokka|OAIPIMPA_118); gnlProkkaOAIPIMPA_140 (original name was: gnl|Prokka|OAIPIMPA_140)

Compact view

gnlProkkaOAIPIMPA_33 - Region 1 - RiPP-like

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Location: 64,760 - 76,352 nt. (total: 11,593 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOAIPIMPA_52 - Region 1 - T3PKS

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Location: 567,768 - 608,937 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOAIPIMPA_107 - Region 1 - terpene

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Location: 24,790 - 45,671 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaOAIPIMPA_129 - Region 1 - cyclic-lactone-autoinducer

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Location: 122,531 - 136,513 nt. (total: 13,983 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.