GCA_021133875.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLGOHPPPG_29 (original name was: gnl|Prokka|LGOHPPPG_29)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	236,327	247,292

gnlProkkaLGOHPPPG_51 (original name was: gnl|Prokka|LGOHPPPG_51)

Region	Type	From	To	Most similar known cluster		Similarity
Region 25.1	lanthipeptide-class-iv	16,232	38,427

gnlProkkaLGOHPPPG_62 (original name was: gnl|Prokka|LGOHPPPG_62)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	lanthipeptide-class-iii	16,962	39,463

Region	Type	From	To	Similarity
Region 12.1	RiPP-like	236,327	247,292
Region 25.1	lanthipeptide-class-iv	16,232	38,427
Region 26.1	lanthipeptide-class-iii	16,962	39,463

No secondary metabolite regions were found in these records:: gnlProkkaLGOHPPPG_1 (original name was: gnl|Prokka|LGOHPPPG_1); gnlProkkaLGOHPPPG_2 (original name was: gnl|Prokka|LGOHPPPG_2); gnlProkkaLGOHPPPG_13 (original name was: gnl|Prokka|LGOHPPPG_13); gnlProkkaLGOHPPPG_21 (original name was: gnl|Prokka|LGOHPPPG_21); gnlProkkaLGOHPPPG_22 (original name was: gnl|Prokka|LGOHPPPG_22); gnlProkkaLGOHPPPG_23 (original name was: gnl|Prokka|LGOHPPPG_23); gnlProkkaLGOHPPPG_24 (original name was: gnl|Prokka|LGOHPPPG_24); gnlProkkaLGOHPPPG_25 (original name was: gnl|Prokka|LGOHPPPG_25); gnlProkkaLGOHPPPG_26 (original name was: gnl|Prokka|LGOHPPPG_26); gnlProkkaLGOHPPPG_27 (original name was: gnl|Prokka|LGOHPPPG_27); gnlProkkaLGOHPPPG_28 (original name was: gnl|Prokka|LGOHPPPG_28); gnlProkkaLGOHPPPG_30 (original name was: gnl|Prokka|LGOHPPPG_30); gnlProkkaLGOHPPPG_31 (original name was: gnl|Prokka|LGOHPPPG_31); gnlProkkaLGOHPPPG_32 (original name was: gnl|Prokka|LGOHPPPG_32); gnlProkkaLGOHPPPG_33 (original name was: gnl|Prokka|LGOHPPPG_33); gnlProkkaLGOHPPPG_34 (original name was: gnl|Prokka|LGOHPPPG_34); gnlProkkaLGOHPPPG_35 (original name was: gnl|Prokka|LGOHPPPG_35); gnlProkkaLGOHPPPG_36 (original name was: gnl|Prokka|LGOHPPPG_36); gnlProkkaLGOHPPPG_37 (original name was: gnl|Prokka|LGOHPPPG_37); gnlProkkaLGOHPPPG_38 (original name was: gnl|Prokka|LGOHPPPG_38); gnlProkkaLGOHPPPG_39 (original name was: gnl|Prokka|LGOHPPPG_39); gnlProkkaLGOHPPPG_40 (original name was: gnl|Prokka|LGOHPPPG_40); gnlProkkaLGOHPPPG_41 (original name was: gnl|Prokka|LGOHPPPG_41); gnlProkkaLGOHPPPG_73 (original name was: gnl|Prokka|LGOHPPPG_73); gnlProkkaLGOHPPPG_84 (original name was: gnl|Prokka|LGOHPPPG_84); gnlProkkaLGOHPPPG_95 (original name was: gnl|Prokka|LGOHPPPG_95); gnlProkkaLGOHPPPG_106 (original name was: gnl|Prokka|LGOHPPPG_106)

Compact view

gnlProkkaLGOHPPPG_29 - Region 1 - RiPP-like

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Location: 236,327 - 247,292 nt. (total: 10,966 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLGOHPPPG_51 - Region 1 - lanthipeptide-class-iv

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Location: 16,232 - 38,427 nt. (total: 22,196 nt) Show pHMM detection rules used

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaLGOHPPPG_62 - Region 1 - lanthipeptide-class-iii

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Location: 16,962 - 39,463 nt. (total: 22,502 nt) Show pHMM detection rules used

lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.