GCA_021133915.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIHHMCIAP_44 (original name was: gnl|Prokka|IHHMCIAP_44)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	133,458	144,648

gnlProkkaIHHMCIAP_77 (original name was: gnl|Prokka|IHHMCIAP_77)

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	lanthipeptide-class-iii	64,848	87,349

gnlProkkaIHHMCIAP_99 (original name was: gnl|Prokka|IHHMCIAP_99)

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	lanthipeptide-class-iv	51,354	73,549

Region	Type	From	To	Similarity
Region 12.1	RiPP-like	133,458	144,648
Region 37.1	lanthipeptide-class-iii	64,848	87,349
Region 39.1	lanthipeptide-class-iv	51,354	73,549

No secondary metabolite regions were found in these records:: gnlProkkaIHHMCIAP_1 (original name was: gnl|Prokka|IHHMCIAP_1); gnlProkkaIHHMCIAP_2 (original name was: gnl|Prokka|IHHMCIAP_2); gnlProkkaIHHMCIAP_13 (original name was: gnl|Prokka|IHHMCIAP_13); gnlProkkaIHHMCIAP_24 (original name was: gnl|Prokka|IHHMCIAP_24); gnlProkkaIHHMCIAP_35 (original name was: gnl|Prokka|IHHMCIAP_35); gnlProkkaIHHMCIAP_38 (original name was: gnl|Prokka|IHHMCIAP_38); gnlProkkaIHHMCIAP_39 (original name was: gnl|Prokka|IHHMCIAP_39); gnlProkkaIHHMCIAP_40 (original name was: gnl|Prokka|IHHMCIAP_40); gnlProkkaIHHMCIAP_41 (original name was: gnl|Prokka|IHHMCIAP_41); gnlProkkaIHHMCIAP_42 (original name was: gnl|Prokka|IHHMCIAP_42); gnlProkkaIHHMCIAP_43 (original name was: gnl|Prokka|IHHMCIAP_43); gnlProkkaIHHMCIAP_45 (original name was: gnl|Prokka|IHHMCIAP_45); gnlProkkaIHHMCIAP_46 (original name was: gnl|Prokka|IHHMCIAP_46); gnlProkkaIHHMCIAP_47 (original name was: gnl|Prokka|IHHMCIAP_47); gnlProkkaIHHMCIAP_48 (original name was: gnl|Prokka|IHHMCIAP_48); gnlProkkaIHHMCIAP_49 (original name was: gnl|Prokka|IHHMCIAP_49); gnlProkkaIHHMCIAP_50 (original name was: gnl|Prokka|IHHMCIAP_50); gnlProkkaIHHMCIAP_51 (original name was: gnl|Prokka|IHHMCIAP_51); gnlProkkaIHHMCIAP_52 (original name was: gnl|Prokka|IHHMCIAP_52); gnlProkkaIHHMCIAP_53 (original name was: gnl|Prokka|IHHMCIAP_53); gnlProkkaIHHMCIAP_54 (original name was: gnl|Prokka|IHHMCIAP_54); gnlProkkaIHHMCIAP_55 (original name was: gnl|Prokka|IHHMCIAP_55); gnlProkkaIHHMCIAP_56 (original name was: gnl|Prokka|IHHMCIAP_56); gnlProkkaIHHMCIAP_57 (original name was: gnl|Prokka|IHHMCIAP_57); gnlProkkaIHHMCIAP_58 (original name was: gnl|Prokka|IHHMCIAP_58); gnlProkkaIHHMCIAP_59 (original name was: gnl|Prokka|IHHMCIAP_59); gnlProkkaIHHMCIAP_60 (original name was: gnl|Prokka|IHHMCIAP_60); gnlProkkaIHHMCIAP_61 (original name was: gnl|Prokka|IHHMCIAP_61); gnlProkkaIHHMCIAP_62 (original name was: gnl|Prokka|IHHMCIAP_62); gnlProkkaIHHMCIAP_63 (original name was: gnl|Prokka|IHHMCIAP_63); gnlProkkaIHHMCIAP_64 (original name was: gnl|Prokka|IHHMCIAP_64); gnlProkkaIHHMCIAP_65 (original name was: gnl|Prokka|IHHMCIAP_65); gnlProkkaIHHMCIAP_66 (original name was: gnl|Prokka|IHHMCIAP_66); gnlProkkaIHHMCIAP_67 (original name was: gnl|Prokka|IHHMCIAP_67); gnlProkkaIHHMCIAP_68 (original name was: gnl|Prokka|IHHMCIAP_68); gnlProkkaIHHMCIAP_88 (original name was: gnl|Prokka|IHHMCIAP_88); gnlProkkaIHHMCIAP_110 (original name was: gnl|Prokka|IHHMCIAP_110); gnlProkkaIHHMCIAP_121 (original name was: gnl|Prokka|IHHMCIAP_121)

Compact view

gnlProkkaIHHMCIAP_44 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 133,458 - 144,648 nt. (total: 11,191 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIHHMCIAP_77 - Region 1 - lanthipeptide-class-iii

Download region GenBank file

Download region SVG

Location: 64,848 - 87,349 nt. (total: 22,502 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaIHHMCIAP_99 - Region 1 - lanthipeptide-class-iv

Download region GenBank file

Download region SVG

Location: 51,354 - 73,549 nt. (total: 22,196 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.