GCA_021229055.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGKOFJOFC_22 (original name was: gnl|Prokka|GKOFJOFC_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	lanthipeptide-class-iv	1	19,988

gnlProkkaGKOFJOFC_33 (original name was: gnl|Prokka|GKOFJOFC_33)

Region	Type	From	To	Most similar known cluster		Similarity
Region 33.1	RiPP-like	70,106	81,278

Region	Type	From	To	Most similar known cluster	Similarity
Region 22.1	lanthipeptide-class-iv	1	19,988
Region 33.1	RiPP-like	70,106	81,278

No secondary metabolite regions were found in these records:: gnlProkkaGKOFJOFC_1 (original name was: gnl|Prokka|GKOFJOFC_1); gnlProkkaGKOFJOFC_2 (original name was: gnl|Prokka|GKOFJOFC_2); gnlProkkaGKOFJOFC_3 (original name was: gnl|Prokka|GKOFJOFC_3); gnlProkkaGKOFJOFC_4 (original name was: gnl|Prokka|GKOFJOFC_4); gnlProkkaGKOFJOFC_5 (original name was: gnl|Prokka|GKOFJOFC_5); gnlProkkaGKOFJOFC_6 (original name was: gnl|Prokka|GKOFJOFC_6); gnlProkkaGKOFJOFC_7 (original name was: gnl|Prokka|GKOFJOFC_7); gnlProkkaGKOFJOFC_8 (original name was: gnl|Prokka|GKOFJOFC_8); gnlProkkaGKOFJOFC_9 (original name was: gnl|Prokka|GKOFJOFC_9); gnlProkkaGKOFJOFC_10 (original name was: gnl|Prokka|GKOFJOFC_10); gnlProkkaGKOFJOFC_11 (original name was: gnl|Prokka|GKOFJOFC_11); gnlProkkaGKOFJOFC_12 (original name was: gnl|Prokka|GKOFJOFC_12); gnlProkkaGKOFJOFC_13 (original name was: gnl|Prokka|GKOFJOFC_13); gnlProkkaGKOFJOFC_14 (original name was: gnl|Prokka|GKOFJOFC_14); gnlProkkaGKOFJOFC_15 (original name was: gnl|Prokka|GKOFJOFC_15); gnlProkkaGKOFJOFC_16 (original name was: gnl|Prokka|GKOFJOFC_16); gnlProkkaGKOFJOFC_17 (original name was: gnl|Prokka|GKOFJOFC_17); gnlProkkaGKOFJOFC_18 (original name was: gnl|Prokka|GKOFJOFC_18); gnlProkkaGKOFJOFC_19 (original name was: gnl|Prokka|GKOFJOFC_19); gnlProkkaGKOFJOFC_20 (original name was: gnl|Prokka|GKOFJOFC_20); gnlProkkaGKOFJOFC_21 (original name was: gnl|Prokka|GKOFJOFC_21); gnlProkkaGKOFJOFC_23 (original name was: gnl|Prokka|GKOFJOFC_23); gnlProkkaGKOFJOFC_24 (original name was: gnl|Prokka|GKOFJOFC_24); gnlProkkaGKOFJOFC_25 (original name was: gnl|Prokka|GKOFJOFC_25); gnlProkkaGKOFJOFC_26 (original name was: gnl|Prokka|GKOFJOFC_26); gnlProkkaGKOFJOFC_27 (original name was: gnl|Prokka|GKOFJOFC_27); gnlProkkaGKOFJOFC_28 (original name was: gnl|Prokka|GKOFJOFC_28); gnlProkkaGKOFJOFC_29 (original name was: gnl|Prokka|GKOFJOFC_29); gnlProkkaGKOFJOFC_30 (original name was: gnl|Prokka|GKOFJOFC_30); gnlProkkaGKOFJOFC_31 (original name was: gnl|Prokka|GKOFJOFC_31); gnlProkkaGKOFJOFC_32 (original name was: gnl|Prokka|GKOFJOFC_32); gnlProkkaGKOFJOFC_34 (original name was: gnl|Prokka|GKOFJOFC_34); gnlProkkaGKOFJOFC_35 (original name was: gnl|Prokka|GKOFJOFC_35); gnlProkkaGKOFJOFC_36 (original name was: gnl|Prokka|GKOFJOFC_36); gnlProkkaGKOFJOFC_37 (original name was: gnl|Prokka|GKOFJOFC_37); gnlProkkaGKOFJOFC_38 (original name was: gnl|Prokka|GKOFJOFC_38); gnlProkkaGKOFJOFC_39 (original name was: gnl|Prokka|GKOFJOFC_39); gnlProkkaGKOFJOFC_40 (original name was: gnl|Prokka|GKOFJOFC_40); gnlProkkaGKOFJOFC_41 (original name was: gnl|Prokka|GKOFJOFC_41); gnlProkkaGKOFJOFC_42 (original name was: gnl|Prokka|GKOFJOFC_42); gnlProkkaGKOFJOFC_43 (original name was: gnl|Prokka|GKOFJOFC_43); gnlProkkaGKOFJOFC_44 (original name was: gnl|Prokka|GKOFJOFC_44); gnlProkkaGKOFJOFC_45 (original name was: gnl|Prokka|GKOFJOFC_45); gnlProkkaGKOFJOFC_46 (original name was: gnl|Prokka|GKOFJOFC_46); gnlProkkaGKOFJOFC_47 (original name was: gnl|Prokka|GKOFJOFC_47); gnlProkkaGKOFJOFC_48 (original name was: gnl|Prokka|GKOFJOFC_48); gnlProkkaGKOFJOFC_49 (original name was: gnl|Prokka|GKOFJOFC_49); gnlProkkaGKOFJOFC_50 (original name was: gnl|Prokka|GKOFJOFC_50); gnlProkkaGKOFJOFC_51 (original name was: gnl|Prokka|GKOFJOFC_51); gnlProkkaGKOFJOFC_55 (original name was: gnl|Prokka|GKOFJOFC_55); gnlProkkaGKOFJOFC_58 (original name was: gnl|Prokka|GKOFJOFC_58); gnlProkkaGKOFJOFC_59 (original name was: gnl|Prokka|GKOFJOFC_59); gnlProkkaGKOFJOFC_60 (original name was: gnl|Prokka|GKOFJOFC_60); gnlProkkaGKOFJOFC_61 (original name was: gnl|Prokka|GKOFJOFC_61)

Compact view

gnlProkkaGKOFJOFC_22 - Region 1 - lanthipeptide-class-iv

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Location: 1 - 19,988 nt. (total: 19,988 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaGKOFJOFC_33 - Region 1 - RiPP-like

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Location: 70,106 - 81,278 nt. (total: 11,173 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.