GCA_021384395.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDEEPHLEE_2 (original name was: gnl|Prokka|DEEPHLEE_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	T3PKS	1	33,790

gnlProkkaDEEPHLEE_15 (original name was: gnl|Prokka|DEEPHLEE_15)

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	lanthipeptide-class-iv	1	2,876

gnlProkkaDEEPHLEE_138 (original name was: gnl|Prokka|DEEPHLEE_138)

Region	Type	From	To	Most similar known cluster		Similarity
Region 81.1	terpene	1	17,512

Region	Type	From	To	Similarity
Region 2.1	T3PKS	1	33,790
Region 15.1	lanthipeptide-class-iv	1	2,876
Region 81.1	terpene	1	17,512

Compact view

gnlProkkaDEEPHLEE_2 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 1 - 33,790 nt. (total: 33,790 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDEEPHLEE_15 - Region 1 - lanthipeptide-class-iv

Download region GenBank file

Download region SVG

Location: 1 - 2,876 nt. (total: 2,876 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-iv: (cds(LANC_like and Pkinase) and not micKC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Lanthipeptides

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Lanthipeptides

Core peptide predictions

No core peptides found.

gnlProkkaDEEPHLEE_138 - Region 1 - terpene

Download region GenBank file

Download region SVG

Location: 1 - 17,512 nt. (total: 17,512 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.