GCA_021410665.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaBFEMBKDO_4 (original name was: gnl|Prokka|BFEMBKDO_4)

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RRE-containing	55,538	75,885

gnlProkkaBFEMBKDO_12 (original name was: gnl|Prokka|BFEMBKDO_12)

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	arylpolyene	572,325	619,920	flexirubin	Other	44%

gnlProkkaBFEMBKDO_19 (original name was: gnl|Prokka|BFEMBKDO_19)

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	phosphonate	4,092	14,793	polysaccharide B	Saccharide	13%

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	RRE-containing	55,538	75,885
Region 12.1	arylpolyene	572,325	619,920	flexirubin	Other	44%
Region 19.1	phosphonate	4,092	14,793	polysaccharide B	Saccharide	13%

No secondary metabolite regions were found in these records:: gnlProkkaBFEMBKDO_1 (original name was: gnl|Prokka|BFEMBKDO_1); gnlProkkaBFEMBKDO_2 (original name was: gnl|Prokka|BFEMBKDO_2); gnlProkkaBFEMBKDO_3 (original name was: gnl|Prokka|BFEMBKDO_3); gnlProkkaBFEMBKDO_5 (original name was: gnl|Prokka|BFEMBKDO_5); gnlProkkaBFEMBKDO_6 (original name was: gnl|Prokka|BFEMBKDO_6); gnlProkkaBFEMBKDO_7 (original name was: gnl|Prokka|BFEMBKDO_7); gnlProkkaBFEMBKDO_8 (original name was: gnl|Prokka|BFEMBKDO_8); gnlProkkaBFEMBKDO_9 (original name was: gnl|Prokka|BFEMBKDO_9); gnlProkkaBFEMBKDO_10 (original name was: gnl|Prokka|BFEMBKDO_10); gnlProkkaBFEMBKDO_11 (original name was: gnl|Prokka|BFEMBKDO_11); gnlProkkaBFEMBKDO_13 (original name was: gnl|Prokka|BFEMBKDO_13); gnlProkkaBFEMBKDO_14 (original name was: gnl|Prokka|BFEMBKDO_14); gnlProkkaBFEMBKDO_15 (original name was: gnl|Prokka|BFEMBKDO_15); gnlProkkaBFEMBKDO_16 (original name was: gnl|Prokka|BFEMBKDO_16); gnlProkkaBFEMBKDO_17 (original name was: gnl|Prokka|BFEMBKDO_17); gnlProkkaBFEMBKDO_18 (original name was: gnl|Prokka|BFEMBKDO_18); gnlProkkaBFEMBKDO_20 (original name was: gnl|Prokka|BFEMBKDO_20); gnlProkkaBFEMBKDO_21 (original name was: gnl|Prokka|BFEMBKDO_21); gnlProkkaBFEMBKDO_22 (original name was: gnl|Prokka|BFEMBKDO_22); gnlProkkaBFEMBKDO_23 (original name was: gnl|Prokka|BFEMBKDO_23); gnlProkkaBFEMBKDO_24 (original name was: gnl|Prokka|BFEMBKDO_24); gnlProkkaBFEMBKDO_25 (original name was: gnl|Prokka|BFEMBKDO_25); gnlProkkaBFEMBKDO_26 (original name was: gnl|Prokka|BFEMBKDO_26); gnlProkkaBFEMBKDO_27 (original name was: gnl|Prokka|BFEMBKDO_27); gnlProkkaBFEMBKDO_28 (original name was: gnl|Prokka|BFEMBKDO_28); gnlProkkaBFEMBKDO_29 (original name was: gnl|Prokka|BFEMBKDO_29); gnlProkkaBFEMBKDO_30 (original name was: gnl|Prokka|BFEMBKDO_30); gnlProkkaBFEMBKDO_31 (original name was: gnl|Prokka|BFEMBKDO_31); gnlProkkaBFEMBKDO_32 (original name was: gnl|Prokka|BFEMBKDO_32); gnlProkkaBFEMBKDO_33 (original name was: gnl|Prokka|BFEMBKDO_33); gnlProkkaBFEMBKDO_34 (original name was: gnl|Prokka|BFEMBKDO_34); gnlProkkaBFEMBKDO_35 (original name was: gnl|Prokka|BFEMBKDO_35); gnlProkkaBFEMBKDO_45 (original name was: gnl|Prokka|BFEMBKDO_45); gnlProkkaBFEMBKDO_56 (original name was: gnl|Prokka|BFEMBKDO_56); gnlProkkaBFEMBKDO_67 (original name was: gnl|Prokka|BFEMBKDO_67); gnlProkkaBFEMBKDO_78 (original name was: gnl|Prokka|BFEMBKDO_78); gnlProkkaBFEMBKDO_79 (original name was: gnl|Prokka|BFEMBKDO_79)

Compact view

gnlProkkaBFEMBKDO_4 - Region 1 - RRE-containing

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Location: 55,538 - 75,885 nt. (total: 20,348 nt) Show pHMM detection rules used

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaBFEMBKDO_12 - Region 1 - arylpolyene

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Location: 572,325 - 619,920 nt. (total: 47,596 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

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NRPS/PKS domains

KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

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Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg12_394

AMP-binding (52..290): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaBFEMBKDO_19 - Region 1 - phosphonate

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Location: 4,092 - 14,793 nt. (total: 10,702 nt) Show pHMM detection rules used

Region on contig edge.

phosphonate: (phosphonates and minimum(1, [2-Hacid_dh_C, Aldedh, Aminotran_1_2, Aminotran_5, AurF, CTP_transf_like, DUF4992, Fe-ADH, HMGL-like, Metallophos_2, NTP_transf_3, NTP_transf_5, PALP, PEP_mutase, TPP_enzyme_C, TPP_enzyme_N, phosphonates]) and not (phosphonatesHydrolase or phosphonatesMeIsocitrateLyase))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1