GCA_021411815.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaCDBDLICO_51 (original name was: gnl|Prokka|CDBDLICO_51)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	arylpolyene	113,670	161,275	flexirubin	Other	48%

gnlProkkaCDBDLICO_70 (original name was: gnl|Prokka|CDBDLICO_70)

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	RRE-containing	1	10,365

No secondary metabolite regions were found in these records:: gnlProkkaCDBDLICO_1 (original name was: gnl|Prokka|CDBDLICO_1); gnlProkkaCDBDLICO_2 (original name was: gnl|Prokka|CDBDLICO_2); gnlProkkaCDBDLICO_3 (original name was: gnl|Prokka|CDBDLICO_3); gnlProkkaCDBDLICO_4 (original name was: gnl|Prokka|CDBDLICO_4); gnlProkkaCDBDLICO_5 (original name was: gnl|Prokka|CDBDLICO_5); gnlProkkaCDBDLICO_6 (original name was: gnl|Prokka|CDBDLICO_6); gnlProkkaCDBDLICO_7 (original name was: gnl|Prokka|CDBDLICO_7); gnlProkkaCDBDLICO_8 (original name was: gnl|Prokka|CDBDLICO_8); gnlProkkaCDBDLICO_9 (original name was: gnl|Prokka|CDBDLICO_9); gnlProkkaCDBDLICO_10 (original name was: gnl|Prokka|CDBDLICO_10); gnlProkkaCDBDLICO_11 (original name was: gnl|Prokka|CDBDLICO_11); gnlProkkaCDBDLICO_12 (original name was: gnl|Prokka|CDBDLICO_12); gnlProkkaCDBDLICO_13 (original name was: gnl|Prokka|CDBDLICO_13); gnlProkkaCDBDLICO_14 (original name was: gnl|Prokka|CDBDLICO_14); gnlProkkaCDBDLICO_24 (original name was: gnl|Prokka|CDBDLICO_24); gnlProkkaCDBDLICO_35 (original name was: gnl|Prokka|CDBDLICO_35); gnlProkkaCDBDLICO_45 (original name was: gnl|Prokka|CDBDLICO_45); gnlProkkaCDBDLICO_46 (original name was: gnl|Prokka|CDBDLICO_46); gnlProkkaCDBDLICO_47 (original name was: gnl|Prokka|CDBDLICO_47); gnlProkkaCDBDLICO_48 (original name was: gnl|Prokka|CDBDLICO_48); gnlProkkaCDBDLICO_49 (original name was: gnl|Prokka|CDBDLICO_49); gnlProkkaCDBDLICO_50 (original name was: gnl|Prokka|CDBDLICO_50); gnlProkkaCDBDLICO_52 (original name was: gnl|Prokka|CDBDLICO_52); gnlProkkaCDBDLICO_53 (original name was: gnl|Prokka|CDBDLICO_53); gnlProkkaCDBDLICO_54 (original name was: gnl|Prokka|CDBDLICO_54); gnlProkkaCDBDLICO_55 (original name was: gnl|Prokka|CDBDLICO_55); gnlProkkaCDBDLICO_56 (original name was: gnl|Prokka|CDBDLICO_56); gnlProkkaCDBDLICO_57 (original name was: gnl|Prokka|CDBDLICO_57); gnlProkkaCDBDLICO_58 (original name was: gnl|Prokka|CDBDLICO_58); gnlProkkaCDBDLICO_59 (original name was: gnl|Prokka|CDBDLICO_59); gnlProkkaCDBDLICO_60 (original name was: gnl|Prokka|CDBDLICO_60); gnlProkkaCDBDLICO_61 (original name was: gnl|Prokka|CDBDLICO_61); gnlProkkaCDBDLICO_62 (original name was: gnl|Prokka|CDBDLICO_62); gnlProkkaCDBDLICO_63 (original name was: gnl|Prokka|CDBDLICO_63); gnlProkkaCDBDLICO_64 (original name was: gnl|Prokka|CDBDLICO_64); gnlProkkaCDBDLICO_65 (original name was: gnl|Prokka|CDBDLICO_65); gnlProkkaCDBDLICO_66 (original name was: gnl|Prokka|CDBDLICO_66); gnlProkkaCDBDLICO_67 (original name was: gnl|Prokka|CDBDLICO_67); gnlProkkaCDBDLICO_68 (original name was: gnl|Prokka|CDBDLICO_68); gnlProkkaCDBDLICO_69 (original name was: gnl|Prokka|CDBDLICO_69); gnlProkkaCDBDLICO_71 (original name was: gnl|Prokka|CDBDLICO_71); gnlProkkaCDBDLICO_72 (original name was: gnl|Prokka|CDBDLICO_72); gnlProkkaCDBDLICO_73 (original name was: gnl|Prokka|CDBDLICO_73); gnlProkkaCDBDLICO_74 (original name was: gnl|Prokka|CDBDLICO_74); gnlProkkaCDBDLICO_75 (original name was: gnl|Prokka|CDBDLICO_75); gnlProkkaCDBDLICO_76 (original name was: gnl|Prokka|CDBDLICO_76); gnlProkkaCDBDLICO_77 (original name was: gnl|Prokka|CDBDLICO_77); gnlProkkaCDBDLICO_78 (original name was: gnl|Prokka|CDBDLICO_78); gnlProkkaCDBDLICO_79 (original name was: gnl|Prokka|CDBDLICO_79); gnlProkkaCDBDLICO_80 (original name was: gnl|Prokka|CDBDLICO_80); gnlProkkaCDBDLICO_81 (original name was: gnl|Prokka|CDBDLICO_81); gnlProkkaCDBDLICO_82 (original name was: gnl|Prokka|CDBDLICO_82); gnlProkkaCDBDLICO_83 (original name was: gnl|Prokka|CDBDLICO_83); gnlProkkaCDBDLICO_84 (original name was: gnl|Prokka|CDBDLICO_84); gnlProkkaCDBDLICO_85 (original name was: gnl|Prokka|CDBDLICO_85); gnlProkkaCDBDLICO_86 (original name was: gnl|Prokka|CDBDLICO_86); gnlProkkaCDBDLICO_87 (original name was: gnl|Prokka|CDBDLICO_87); gnlProkkaCDBDLICO_88 (original name was: gnl|Prokka|CDBDLICO_88); gnlProkkaCDBDLICO_89 (original name was: gnl|Prokka|CDBDLICO_89); gnlProkkaCDBDLICO_90 (original name was: gnl|Prokka|CDBDLICO_90); gnlProkkaCDBDLICO_91 (original name was: gnl|Prokka|CDBDLICO_91); gnlProkkaCDBDLICO_92 (original name was: gnl|Prokka|CDBDLICO_92); gnlProkkaCDBDLICO_93 (original name was: gnl|Prokka|CDBDLICO_93); gnlProkkaCDBDLICO_94 (original name was: gnl|Prokka|CDBDLICO_94); gnlProkkaCDBDLICO_95 (original name was: gnl|Prokka|CDBDLICO_95); gnlProkkaCDBDLICO_96 (original name was: gnl|Prokka|CDBDLICO_96); gnlProkkaCDBDLICO_97 (original name was: gnl|Prokka|CDBDLICO_97); gnlProkkaCDBDLICO_98 (original name was: gnl|Prokka|CDBDLICO_98); gnlProkkaCDBDLICO_99 (original name was: gnl|Prokka|CDBDLICO_99); gnlProkkaCDBDLICO_100 (original name was: gnl|Prokka|CDBDLICO_100); gnlProkkaCDBDLICO_101 (original name was: gnl|Prokka|CDBDLICO_101); gnlProkkaCDBDLICO_102 (original name was: gnl|Prokka|CDBDLICO_102); gnlProkkaCDBDLICO_103 (original name was: gnl|Prokka|CDBDLICO_103); gnlProkkaCDBDLICO_104 (original name was: gnl|Prokka|CDBDLICO_104); gnlProkkaCDBDLICO_105 (original name was: gnl|Prokka|CDBDLICO_105); gnlProkkaCDBDLICO_106 (original name was: gnl|Prokka|CDBDLICO_106); gnlProkkaCDBDLICO_107 (original name was: gnl|Prokka|CDBDLICO_107); gnlProkkaCDBDLICO_108 (original name was: gnl|Prokka|CDBDLICO_108); gnlProkkaCDBDLICO_109 (original name was: gnl|Prokka|CDBDLICO_109); gnlProkkaCDBDLICO_110 (original name was: gnl|Prokka|CDBDLICO_110); gnlProkkaCDBDLICO_111 (original name was: gnl|Prokka|CDBDLICO_111); gnlProkkaCDBDLICO_112 (original name was: gnl|Prokka|CDBDLICO_112); gnlProkkaCDBDLICO_113 (original name was: gnl|Prokka|CDBDLICO_113); gnlProkkaCDBDLICO_114 (original name was: gnl|Prokka|CDBDLICO_114); gnlProkkaCDBDLICO_115 (original name was: gnl|Prokka|CDBDLICO_115); gnlProkkaCDBDLICO_116 (original name was: gnl|Prokka|CDBDLICO_116); gnlProkkaCDBDLICO_117 (original name was: gnl|Prokka|CDBDLICO_117); gnlProkkaCDBDLICO_118 (original name was: gnl|Prokka|CDBDLICO_118); gnlProkkaCDBDLICO_119 (original name was: gnl|Prokka|CDBDLICO_119); gnlProkkaCDBDLICO_120 (original name was: gnl|Prokka|CDBDLICO_120); gnlProkkaCDBDLICO_121 (original name was: gnl|Prokka|CDBDLICO_121); gnlProkkaCDBDLICO_122 (original name was: gnl|Prokka|CDBDLICO_122); gnlProkkaCDBDLICO_123 (original name was: gnl|Prokka|CDBDLICO_123); gnlProkkaCDBDLICO_124 (original name was: gnl|Prokka|CDBDLICO_124); gnlProkkaCDBDLICO_125 (original name was: gnl|Prokka|CDBDLICO_125); gnlProkkaCDBDLICO_126 (original name was: gnl|Prokka|CDBDLICO_126); gnlProkkaCDBDLICO_127 (original name was: gnl|Prokka|CDBDLICO_127); gnlProkkaCDBDLICO_128 (original name was: gnl|Prokka|CDBDLICO_128); gnlProkkaCDBDLICO_129 (original name was: gnl|Prokka|CDBDLICO_129); gnlProkkaCDBDLICO_130 (original name was: gnl|Prokka|CDBDLICO_130); gnlProkkaCDBDLICO_131 (original name was: gnl|Prokka|CDBDLICO_131); gnlProkkaCDBDLICO_132 (original name was: gnl|Prokka|CDBDLICO_132); gnlProkkaCDBDLICO_133 (original name was: gnl|Prokka|CDBDLICO_133); gnlProkkaCDBDLICO_134 (original name was: gnl|Prokka|CDBDLICO_134); gnlProkkaCDBDLICO_135 (original name was: gnl|Prokka|CDBDLICO_135); gnlProkkaCDBDLICO_136 (original name was: gnl|Prokka|CDBDLICO_136); gnlProkkaCDBDLICO_137 (original name was: gnl|Prokka|CDBDLICO_137); gnlProkkaCDBDLICO_138 (original name was: gnl|Prokka|CDBDLICO_138)

Compact view

gnlProkkaCDBDLICO_51 - Region 1 - arylpolyene

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Location: 113,670 - 161,275 nt. (total: 47,606 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg23_120

AMP-binding (46..308): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)

gnlProkkaCDBDLICO_70 - Region 1 - RRE-containing

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Location: 1 - 10,365 nt. (total: 10,365 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.