GCA_021623275.1 - 7 region(s)

Identified primary metabolite regions

c00024_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_24)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 24.1	Rnf_complex	E-MGC	1	13,541	Rnf complex C. sporogenes	RNF	100%

c00045_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_45)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 45.1	Pyruvate2acetate-formate	SCFA	1	10,954	Pyruvate to acetate and formate C. acetobutylicum	PFL_acetate	100%

c00048_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_48)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 48.1	gallic_acid_met	Aromatic	1	10,663	Gallic acid degradation B. sp. KLE	GALL	100%

c00095_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_95)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 95.1	Others_HGD_unassigned	Putative	1	19,675

c00155_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_155)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 155.1	Putrescine2spermidine	Aliphatic_amine	4,864	21,789	Putrescine2spermidine E. rectale	SPRM	100%

c00194_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_194)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 194.1	succinate2propionate	SCFA	1	17,863	Succinate to propionate B. theta	PRO	33%

c00217_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_217)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 217.1	acetate2butyrate	SCFA	820	16,229	Acetate to butyrate C. sporogenes	BUT	83%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_1); c00002_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_2); c00003_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_3); c00004_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_4); c00005_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_5); c00006_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_6); c00007_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_7); c00008_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_8); c00009_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_9); c00010_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_10); c00011_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_11); c00012_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_12); c00013_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_13); c00014_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_14); c00015_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_15); c00016_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_16); c00017_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_17); c00018_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_18); c00019_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_19); c00020_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_20); c00021_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_21); c00022_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_22); c00023_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_23); c00025_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_25); c00026_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_26); c00027_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_27); c00028_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_28); c00029_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_29); c00030_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_30); c00031_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_31); c00032_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_32); c00033_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_33); c00034_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_34); c00035_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_35); c00036_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_36); c00037_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_37); c00038_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_38); c00039_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_39); c00040_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_40); c00041_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_41); c00042_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_42); c00043_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_43); c00044_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_44); c00046_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_46); c00047_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_47); c00049_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_49); c00050_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_50); c00051_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_51); c00052_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_52); c00053_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_53); c00054_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_54); c00055_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_55); c00056_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_56); c00057_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_57); c00058_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_58); c00059_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_59); c00060_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_60); c00061_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_61); c00062_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_62); c00063_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_63); c00064_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_64); c00065_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_65); c00066_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_66); c00067_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_67); c00068_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_68); c00069_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_69); c00070_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_70); c00071_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_71); c00072_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_72); c00073_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_73); c00074_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_74); c00075_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_75); c00076_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_76); c00077_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_77); c00078_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_78); c00079_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_79); c00080_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_80); c00081_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_81); c00082_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_82); c00083_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_83); c00084_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_84); c00085_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_85); c00086_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_86); c00087_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_87); c00088_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_88); c00089_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_89); c00090_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_90); c00091_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_91); c00092_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_92); c00093_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_93); c00094_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_94); c00096_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_96); c00097_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_97); c00098_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_98); c00099_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_99); c00100_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_100); c00101_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_101); c00102_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_102); c00103_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_103); c00104_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_104); c00105_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_105); c00106_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_106); c00107_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_107); c00108_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_108); c00109_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_109); c00110_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_110); c00111_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_111); c00112_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_112); c00113_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_113); c00114_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_114); c00115_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_115); c00116_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_116); c00117_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_117); c00118_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_118); c00119_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_119); c00120_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_120); c00121_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_121); c00122_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_122); c00123_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_123); c00124_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_124); c00125_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_125); c00126_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_126); c00127_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_127); c00128_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_128); c00129_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_129); c00130_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_130); c00131_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_131); c00132_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_132); c00133_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_133); c00134_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_134); c00135_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_135); c00136_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_136); c00137_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_137); c00138_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_138); c00139_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_139); c00140_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_140); c00141_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_141); c00142_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_142); c00143_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_143); c00144_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_144); c00145_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_145); c00146_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_146); c00147_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_147); c00148_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_148); c00149_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_149); c00150_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_150); c00151_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_151); c00152_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_152); c00153_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_153); c00154_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_154); c00156_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_156); c00157_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_157); c00158_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_158); c00159_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_159); c00160_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_160); c00161_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_161); c00162_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_162); c00163_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_163); c00164_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_164); c00165_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_165); c00166_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_166); c00167_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_167); c00168_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_168); c00169_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_169); c00170_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_170); c00171_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_171); c00172_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_172); c00173_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_173); c00174_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_174); c00175_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_175); c00176_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_176); c00177_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_177); c00178_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_178); c00179_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_179); c00180_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_180); c00181_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_181); c00182_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_182); c00183_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_183); c00184_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_184); c00185_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_185); c00186_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_186); c00187_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_187); c00188_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_188); c00189_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_189); c00190_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_190); c00191_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_191); c00192_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_192); c00193_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_193); c00195_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_195); c00196_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_196); c00197_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_197); c00198_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_198); c00199_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_199); c00200_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_200); c00201_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_201); c00202_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_202); c00203_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_203); c00204_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_204); c00205_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_205); c00206_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_206); c00207_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_207); c00208_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_208); c00209_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_209); c00210_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_210); c00211_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_211); c00212_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_212); c00213_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_213); c00214_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_214); c00215_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_215); c00216_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_216); c00218_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_218); c00219_gnlPro.. (original name was: gnl|Prokka|LANLAPFM_219)

Compact view

c00024_gnlPro.. - Region 1 - Rnf_complex

Download region GenBank file

Location: 1 - 13,541 nt. (total: 13,541 nt) Show pHMM detection rules used

Region on contig edge.

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00045_gnlPro.. - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 1 - 10,954 nt. (total: 10,954 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00048_gnlPro.. - Region 1 - gallic_acid_met

Download region GenBank file

Location: 1 - 10,663 nt. (total: 10,663 nt) Show pHMM detection rules used

Region on contig edge.

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00095_gnlPro.. - Region 1 - Others_HGD_unassigned

Download region GenBank file

Location: 1 - 19,675 nt. (total: 19,675 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

c00155_gnlPro.. - Region 1 - Putrescine2spermidine

Download region GenBank file

Location: 4,864 - 21,789 nt. (total: 16,926 nt) Show pHMM detection rules used

Region on contig edge.

Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00194_gnlPro.. - Region 1 - succinate2propionate

Download region GenBank file

Location: 1 - 17,863 nt. (total: 17,863 nt) Show pHMM detection rules used

Region on contig edge.

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

c00217_gnlPro.. - Region 1 - acetate2butyrate

Download region GenBank file

Location: 820 - 16,229 nt. (total: 15,410 nt) Show pHMM detection rules used

Region on contig edge.

acetate2butyrate: (not (POR or POR_N or PFOR_II) and minimum(4, [Acyl-CoA_dh_1, Acyl-CoA_dh_2, ECH_2, ETF, ETF_alpha, HCDH_N, Thiolase_N, ketoacyl-synt]) and HCDH and minimum(1, [EC1_2-faecali, ECH1_Enoyl_CoA_DH1, ECH1_Enoyl_CoA_DH2, ECH1_Enoyl_CoA_DH3, ECH1_Enoyl_CoA_DH4, Thiolase_C]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters