Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_022133625.1	Bifidobacterium bifidum	DFI.7.59	SAMN24726072	-	USA:Chicago	Homo sapiens	0	2	0	0	2.00
2	GCA_022134905.2	Bifidobacterium bifidum	DFI.7.51	SAMN24726067	-	USA:Chicago	Homo sapiens	13	2	0	0	2.00
3	GCA_000165905.1	Bifidobacterium bifidum PRL2010	PRL2010	SAMN02603510	-	-	Homo sapiens	978	2	0	0	2.00
4	GCA_001020375.1	Bifidobacterium bifidum	324B	SAMN03097400	-	-	Homo sapiens	980	2	0	0	2.00
5	GCA_039913115.1	Bifidobacterium bifidum	RTP21221st1_H7_RTP21221_200709	SAMN31321408	2020-07-09	USA	Homo sapiens	986	2	0	0	2.00
6	GCA_039913175.1	Bifidobacterium bifidum	RTP21221st1_A9_RTP21221_200709	SAMN31321405	2020-07-09	USA	Homo sapiens	986	2	0	0	2.00
7	GCA_039913135.1	Bifidobacterium bifidum	RTP21221st1_H4_RTP21221_200709	SAMN31321407	2020-07-09	USA	Homo sapiens	996	2	0	0	2.00
8	GCA_028203535.1	Bifidobacterium bifidum	RTP21221st1_G2_RTP21221_200709	SAMN31321406	2020-07-09	USA	Homo sapiens	1003	1	0	0	1.00
9	GCA_028201965.1	Bifidobacterium bifidum	2226st1_E4_2226SCRN_200925	SAMN31321353	2020-09-25	USA	Homo sapiens	1027	2	0	0	2.00
10	GCA_013867495.1	Bifidobacterium bifidum	s-1	SAMN15579835	2020-07-20	-	-	1030	2	0	0	2.00
11	GCA_016307165.1	Bifidobacterium bifidum	UBBB-55	SAMN16793263	2008-03-17	India: Unique Biotech Limited, Hyderabad	Homo sapiens	1030	2	0	0	2.00
12	GCA_039913355.1	Bifidobacterium bifidum	2226st1_G9_2226SCRN_200925	SAMN31321354	2020-09-25	USA	Homo sapiens	1030	2	0	0	2.00
13	GCA_000466525.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	ATCC 29521	SAMN02436821	-	-	Homo sapiens	1031	2	0	0	2.00
14	GCA_000741085.1	Bifidobacterium bifidum	LMG 11041	SAMN02673426	-	-	Homo sapiens	1031	2	0	0	2.00
15	GCA_001025135.1	Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456	-	SAMD00061040	-	-	-	1031	2	0	0	2.00
16	GCA_017814645.1	Bifidobacterium bifidum	BB-G90	SAMN18436315	2011-11	China: Neimenggu	Homo sapiens	1031	2	0	0	2.00
17	GCA_900637095.1	Bifidobacterium bifidum	NCTC13001	SAMEA4063017	-	-	-	1031	2	0	0	2.00
18	GCA_039913195.1	Bifidobacterium bifidum	H3_hBSD2780061687_210209	SAMN31321393	2021-02-09	USA	Homo sapiens	1034	4	0	0	4.00
19	GCA_039913275.1	Bifidobacterium bifidum	F12_hBSD2780061687_210209	SAMN31321391	2021-02-09	USA	Homo sapiens	1034	4	0	0	4.00
20	GCA_028203575.1	Bifidobacterium bifidum	F10_hBSD2780061687_210209	SAMN31321389	2021-02-09	USA	Homo sapiens	1035	4	0	0	4.00
21	GCA_039913335.1	Bifidobacterium bifidum	E4_hBSD2780061687_210209	SAMN31321387	2021-02-09	USA	Homo sapiens	1035	4	0	0	4.00
22	GCA_028202495.1	Bifidobacterium bifidum	H9_hBSD2780061687_210209	SAMN31321394	2021-02-09	USA	Homo sapiens	1036	4	0	0	4.00
23	GCA_040094955.1	Bifidobacterium bifidum	CLA-AA-H198	SAMN40631356	2020-07-20	Germany:Aachen	Homo sapiens	1038	2	0	0	2.00
24	GCA_039913215.1	Bifidobacterium bifidum	G9_hBSD2780061687_210209	SAMN31321392	2021-02-09	USA	Homo sapiens	1039	4	0	0	4.00
25	GCA_028203625.1	Bifidobacterium bifidum	E2_hBSD2780061687_210209	SAMN31321386	2021-02-09	USA	Homo sapiens	1040	4	0	0	4.00
26	GCA_000155395.1	Bifidobacterium bifidum NCIMB 41171	NCIMB 41171	SAMN02463676	-	-	Homo sapiens	1041	3	0	0	3.00
27	GCA_028202015.1	Bifidobacterium bifidum	D52st1_E11_D52t1_170925	SAMN31321364	2017-09-25	USA	Homo sapiens	1042	2	0	0	2.00
28	GCA_028202855.1	Bifidobacterium bifidum	1001136st1_C1_1001136B_160425	SAMN31321326	2016-04-25	USA	Homo sapiens	1042	2	0	0	2.00
29	GCA_039913315.1	Bifidobacterium bifidum	E5_hBSD2780061687_210209	SAMN31321388	2021-02-09	USA	Homo sapiens	1042	4	0	0	4.00
30	GCA_039913255.1	Bifidobacterium bifidum	F11_hBSD2780061687_210209	SAMN31321390	2021-02-09	USA	Homo sapiens	1043	4	0	0	4.00
31	GCA_039913295.1	Bifidobacterium bifidum	D8_hBSD2780061687_210209	SAMN31321385	2021-02-09	USA	Homo sapiens	1043	4	0	0	4.00
32	GCA_001020325.1	Bifidobacterium bifidum	LMG 13200	SAMN03097405	-	-	Homo sapiens	1045	2	0	0	2.00
33	GCA_001020405.1	Bifidobacterium bifidum	IPLA 20015	SAMN03103719	-	-	Homo sapiens	1045	4	0	0	4.00
34	GCA_025506295.1	Bifidobacterium bifidum	20	SAMN12565454	2019-04-01	United Kingdom	Homo sapiens	1046	2	0	0	2.00
35	GCA_002469385.1	Bifidobacterium bifidum	1 G1971	SAMN06759457	1977	Russia: Moscow	Homo sapiens	1047	1	0	0	1.00
36	GCA_900112465.1	Bifidobacterium bifidum	Calf96	SAMN05216254	-	-	-	1047	2	0	0	2.00
37	GCA_004167365.1	Bifidobacterium bifidum	ca_0067	SAMN10239585	2015-01	USA: Cambridge	Homo sapiens	1048	3	0	0	3.00
38	GCA_009077915.1	Bifidobacterium bifidum	BIOML-A8	SAMN11944598	2015-03-31	USA:Boston	Homo sapiens	1048	3	0	0	3.00
39	GCA_003466365.1	Bifidobacterium bifidum	TM06-5	SAMN09736996	2013-08-01	China: Shenzhen	Homo sapiens	1049	4	0	0	4.00
40	GCA_003466395.1	Bifidobacterium bifidum	TM06-10	SAMN09736987	2013-08-01	China: Shenzhen	Homo sapiens	1049	4	0	0	4.00
41	GCA_009075785.1	Bifidobacterium bifidum	BIOML-A1	SAMN11944591	2015-03-31	USA:Boston	Homo sapiens	1049	3	0	0	3.00
42	GCA_009077955.1	Bifidobacterium bifidum	BIOML-A7	SAMN11944597	2015-03-31	USA:Boston	Homo sapiens	1049	3	0	0	3.00
43	GCA_009078005.1	Bifidobacterium bifidum	BIOML-A5	SAMN11944595	2015-03-31	USA:Boston	Homo sapiens	1049	3	0	0	3.00
44	GCA_009078015.1	Bifidobacterium bifidum	BIOML-A4	SAMN11944594	2015-03-31	USA:Boston	Homo sapiens	1049	3	0	0	3.00
45	GCA_009078065.1	Bifidobacterium bifidum	BIOML-A3	SAMN11944593	2015-03-31	USA:Boston	Homo sapiens	1049	3	0	0	3.00
46	GCA_009078095.1	Bifidobacterium bifidum	BIOML-A9	SAMN11944599	2015-03-31	USA:Boston	Homo sapiens	1049	3	0	0	3.00
47	GCA_039913015.1	Bifidobacterium bifidum	RTP31036st1_A12_RTP31036_200814	SAMN31321415	2020-08-14	USA	Homo sapiens	1049	2	0	0	2.00
48	GCA_039913035.1	Bifidobacterium bifidum	RTP31036st1_G6_RTP31036_200814	SAMN31321416	2020-08-14	USA	Homo sapiens	1049	2	0	0	2.00
49	GCA_009075765.1	Bifidobacterium bifidum	BIOML-A2	SAMN11944592	2015-03-31	USA:Boston	Homo sapiens	1050	3	0	0	3.00
50	GCA_009077975.1	Bifidobacterium bifidum	BIOML-A6	SAMN11944596	2015-03-31	USA:Boston	Homo sapiens	1050	3	0	0	3.00
51	GCA_028202395.1	Bifidobacterium bifidum	J1101312st1_E10_J1101312_190322	SAMN31321382	2019-03-22	USA	Homo sapiens	1050	2	0	0	2.00
52	GCA_028202415.1	Bifidobacterium bifidum	J1101312st1_C7_J1101312_190322	SAMN31321381	2019-03-22	USA	Homo sapiens	1050	2	0	0	2.00
53	GCA_028203675.1	Bifidobacterium bifidum	J1101312st1_H2_J1101312_190322	SAMN31321384	2019-03-22	USA	Homo sapiens	1050	2	0	0	2.00
54	GCA_028203695.1	Bifidobacterium bifidum	J1101312st1_E3_J1101312_190322	SAMN31321383	2019-03-22	USA	Homo sapiens	1050	2	0	0	2.00
55	GCA_000265095.1	Bifidobacterium bifidum BGN4	BGN4	SAMN02603486	-	South Korea	Homo sapiens	1051	2	0	0	2.00
56	GCA_016838705.1	Bifidobacterium bifidum	HN002	SAMN17735950	2017-06-08	South Korea: Jeongup	Homo sapiens	1052	2	0	0	2.00
57	GCA_039912995.1	Bifidobacterium bifidum	RTP21222st1_H10_RTP21222_200807	SAMN31321412	2020-08-07	USA	Homo sapiens	1052	2	0	0	2.00
58	GCA_039913055.1	Bifidobacterium bifidum	RTP21222st1_F7_RTP21222_200807	SAMN31321411	2020-08-07	USA	Homo sapiens	1052	2	0	0	2.00
59	GCA_039913095.1	Bifidobacterium bifidum	RTP21222st1_D12_RTP21222_200807	SAMN31321409	2020-08-07	USA	Homo sapiens	1052	2	0	0	2.00
60	GCA_049191915.1	Bifidobacterium bifidum	IATA049	SAMN45053955	2022	Spain:Valencia	Homo sapiens	1052	2	0	0	2.00
61	GCA_000300215.1	Bifidobacterium bifidum IPLA 20015	IPLA 20015	SAMN02470078	-	-	Homo sapiens	1053	4	0	0	4.00
62	GCA_028201955.1	Bifidobacterium bifidum	C7_h1001283B150217_200217	SAMN31321368	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
63	GCA_028202035.1	Bifidobacterium bifidum	B1_h1001283B150217_200217	SAMN31321367	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
64	GCA_028202125.1	Bifidobacterium bifidum	1001283st1_F2_1001283B150304_161114	SAMN31321343	2016-11-14	USA	Homo sapiens	1053	2	0	0	2.00
65	GCA_028202155.1	Bifidobacterium bifidum	1001283st1_G4_1001283B150217_161031	SAMN31321346	2016-10-31	USA	Homo sapiens	1053	2	0	0	2.00
66	GCA_028202165.1	Bifidobacterium bifidum	1001283st1_F3_1001283B150210_160208	SAMN31321344	2016-02-08	USA	Homo sapiens	1053	2	0	0	2.00
67	GCA_028202215.1	Bifidobacterium bifidum	1001283st1_F5_1001283B150209_150212	SAMN31321345	2015-02-12	USA	Homo sapiens	1053	2	0	0	2.00
68	GCA_028202295.1	Bifidobacterium bifidum	1001283st1_C1_1001283B150225_161107	SAMN31321338	2016-11-07	USA	Homo sapiens	1053	2	0	0	2.00
69	GCA_028202335.1	Bifidobacterium bifidum	1001283st1_A1_1001285H_161024	SAMN31321336	2016-10-24	USA	Homo sapiens	1053	3	0	0	3.00
70	GCA_028202355.1	Bifidobacterium bifidum	1001283st1_E8_1001285I_161205	SAMN31321342	2016-12-05	USA	Homo sapiens	1053	3	0	0	3.00
71	GCA_028202365.1	Bifidobacterium bifidum	1001283st1_B11_1001285I_161205	SAMN31321337	2016-12-05	USA	Homo sapiens	1053	3	0	0	3.00
72	GCA_028202575.1	Bifidobacterium bifidum	1001283st1_E8_1001283B150210_160208	SAMN31321341	2016-02-08	USA	Homo sapiens	1053	2	0	0	2.00
73	GCA_028202605.1	Bifidobacterium bifidum	1001283st1_D6_1001283B150209_150212	SAMN31321340	2015-02-12	USA	Homo sapiens	1053	2	0	0	2.00
74	GCA_028202725.1	Bifidobacterium bifidum	1001283st1_C8_1001283B150304_161114	SAMN31321339	2016-11-14	USA	Homo sapiens	1053	2	0	0	2.00
75	GCA_028203615.1	Bifidobacterium bifidum	A12_h1001283B150217_200217	SAMN31321372	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
76	GCA_028203705.1	Bifidobacterium bifidum	G10_h1001283B150217_200217	SAMN31321380	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
77	GCA_028203735.1	Bifidobacterium bifidum	F6_h1001283B150217_200217	SAMN31321377	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
78	GCA_028203745.1	Bifidobacterium bifidum	G8_h1001283B150217_200217	SAMN31321379	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
79	GCA_028203775.1	Bifidobacterium bifidum	F11_h1001283B150217_200217	SAMN31321378	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
80	GCA_028203795.1	Bifidobacterium bifidum	C4_h1001283B150217_200217	SAMN31321375	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
81	GCA_028203815.1	Bifidobacterium bifidum	F5_h1001283B150217_200217	SAMN31321376	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
82	GCA_028203875.1	Bifidobacterium bifidum	H3_h1001283B150217_200217	SAMN31321371	2020-02-17	USA	Homo sapiens	1053	2	0	0	2.00
83	GCA_039913075.1	Bifidobacterium bifidum	RTP21222st1_F4_RTP21222_200807	SAMN31321410	2020-08-07	USA	Homo sapiens	1053	2	0	0	2.00
84	GCA_039913365.1	Bifidobacterium bifidum	C1_h1001283B150217_200217	SAMN31321374	2020-02-17	USA	Homo sapiens	1053	3	0	1	3.16
85	GCA_028201895.1	Bifidobacterium bifidum	G6_h1001283B150217_200217	SAMN31321369	2020-02-17	USA	Homo sapiens	1054	2	0	0	2.00
86	GCA_028202555.1	Bifidobacterium bifidum	B6_h1001283B150217_200217	SAMN31321373	2020-02-17	USA	Homo sapiens	1054	2	0	0	2.00
87	GCA_028203895.1	Bifidobacterium bifidum	H2_h1001283B150217_200217	SAMN31321370	2020-02-17	USA	Homo sapiens	1055	2	0	0	2.00
88	GCA_003573955.1	Bifidobacterium bifidum LMG 13195	-	SAMD00078038	-	-	-	1056	2	0	0	2.00
89	GCA_017894325.1	Bifidobacterium bifidum	CNCM I-4319	SAMN15324980	2017-09	France	Homo sapiens	1056	2	0	0	2.00
90	GCA_028202675.1	Bifidobacterium bifidum	1001271st1_H11_1001271B_150615	SAMN31321335	2015-06-15	USA	Homo sapiens	1056	3	0	0	3.00
91	GCA_028202815.1	Bifidobacterium bifidum	1001271st1_A6_1001270H_150608	SAMN31321332	2015-06-08	USA	Homo sapiens	1056	3	0	0	3.00
92	GCA_028202735.1	Bifidobacterium bifidum	1001271st1_F2_1001271B_151109	SAMN31321333	2015-11-09	USA	Homo sapiens	1057	3	0	0	3.00
93	GCA_028203495.1	Bifidobacterium bifidum	RTP21484st2_A9_RTP21484_190118	SAMN31321414	2019-01-18	USA	Homo sapiens	1057	2	0	0	2.00
94	GCA_028368265.1	Bifidobacterium bifidum	RTP21484st2_G9_RTP21484_190118	SAMN31321246	2019-01-18	USA	Homo sapiens	1057	2	0	0	2.00
95	GCA_001281345.1	Bifidobacterium bifidum	BF3	SAMN03271680	2001-10-25	Korea	Homo sapiens	1058	3	0	0	3.00
96	GCA_028202715.1	Bifidobacterium bifidum	1001271st1_G7_1001270J_160509	SAMN31321334	2016-05-09	USA	Homo sapiens	1058	2	0	0	2.00
97	GCA_046763285.1	Bifidobacterium bifidum	LHP007	SAMN46218889	2021	United Kingdom: Norwich	Homo sapiens	1058	2	0	0	2.00
98	GCA_049204775.1	Bifidobacterium bifidum	IATA148	SAMN45053989	2022	Spain:Valencia	Homo sapiens	1059	2	0	0	2.00
99	GCA_028202185.1	Bifidobacterium bifidum	BSD2780061688st1_D1_BSD2780061688b_171218	SAMN31321359	2017-12-18	USA	Homo sapiens	1060	3	0	0	3.00
100	GCA_028202425.1	Bifidobacterium bifidum	A4_hBSD2780061687b_210117	SAMN31321396	2021-01-17	USA	Homo sapiens	1060	3	0	0	3.00