Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_003175035.1	Limosilactobacillus reuteri	LR12	SAMN08934319	2016	China	cow	0	0	0	0	0.00
2	GCA_003175115.1	Limosilactobacillus reuteri	LR6	SAMN08934313	2016	China	sheep	0	0	0	0	0.00
3	GCA_022509405.1	Limosilactobacillus reuteri	QAULRN15	SAMN20114177	2018-01-01/2021-01-01	Pakistan: Islamabad	-	0	0	0	0	0.00
4	GCA_003175085.1	Limosilactobacillus reuteri	LR7	SAMN08934314	2016	China	sheep	1	0	0	0	0.00
5	GCA_020785035.1	Limosilactobacillus reuteri	LTM_Jesus_5_1	SAMN22258626	2014-02	USA:California	Lion-tailed Macaque	684	0	0	1	1.00
6	GCA_003703885.1	Limosilactobacillus reuteri	2010	SAMN08615538	-	-	rat	685	1	0	1	1.41
7	GCA_004684995.1	Limosilactobacillus reuteri	I8-5	SAMN11294217	2017	USA: San Francisco	Mus musculus	685	0	0	1	1.00
8	GCA_030262475.1	Limosilactobacillus reuteri	BIO7251	SAMN35621297	2021-01	France	-	687	0	0	1	1.00
9	GCA_020784595.1	Limosilactobacillus reuteri	C4	SAMN22258648	2015	Canada:Vancouver	Capy C	688	0	0	1	1.00
10	GCA_020784605.1	Limosilactobacillus reuteri	C3	SAMN22258647	2015	Canada:Vancouver	Capy C	688	0	0	1	1.00
11	GCA_020785095.1	Limosilactobacillus reuteri	LTM_Jesus_1_1	SAMN22258625	2014-02	USA:California	Lion-tailed Macaque	688	0	0	1	1.00
12	GCA_020785115.1	Limosilactobacillus reuteri	BHM_Lincecum_1_1	SAMN22258621	2014-02	USA:California	Black Howler Monkey	688	0	0	1	1.00
13	GCA_020784795.1	Limosilactobacillus reuteri	apa71	SAMN22258639	-	Sweden	Monkey	689	1	0	1	1.41
14	GCA_020784455.1	Limosilactobacillus reuteri	FUA 3048	SAMN22258655	2005	Canada:Edmonton	Rat	690	0	0	1	1.00
15	GCA_020784555.1	Limosilactobacillus reuteri	D.l.1-B	SAMN22258650	2015	Canada:Edmonton	Dasyprocta leporina	690	0	0	1	1.00
16	GCA_020784575.1	Limosilactobacillus reuteri	C.p.1-C	SAMN22258649	2015	Canada:Edmonton	Coendou prehensilis	690	0	0	1	1.00
17	GCA_020784635.1	Limosilactobacillus reuteri	D.l.3-A	SAMN22258651	2015	Canada:Edmonton	Dasyprocta leporina	690	0	0	1	1.00
18	GCA_020784255.1	Limosilactobacillus reuteri	2A	SAMN22258665	2015	Canada:Calgary	Porqupine	691	0	0	1	1.00
19	GCA_000410995.1	Limosilactobacillus reuteri I5007	I5007	SAMN02603119	-	-	pigs	692	2	0	0	2.00
20	GCA_002128525.1	Limosilactobacillus reuteri	KLR1004	SAMN05751482	2006-06-20	South Korea	pig	692	10	0	1	10.05
21	GCA_002128615.1	Limosilactobacillus reuteri	KLR3002	SAMN05751492	2015-05-06	South Korea	pig	692	2	0	1	2.24
22	GCA_020784205.1	Limosilactobacillus reuteri	AG_2_7_1	SAMN22258666	2013-03	USA:Nebraska	Agile Gibbon	692	0	0	1	1.00
23	GCA_046938025.1	Limosilactobacillus reuteri subsp. suis	M824A	SAMN35847956	2019	Czech Republic	domestic pig	692	0	0	1	1.00
24	GCA_046938195.1	Limosilactobacillus reuteri subsp. suis	M774A	SAMN35847979	2019	Czech Republic	domestic pig	692	1	0	1	1.41
25	GCA_000236455.2	Limosilactobacillus reuteri subsp. suis	ATCC 53608	SAMEA2272605	-	-	-	693	0	0	0	0.00
26	GCA_001889975.1	Limosilactobacillus reuteri	121	SAMN05788099	1999-01-01	Netherlands	pig	693	6	0	0	6.00
27	GCA_002027295.1	Limosilactobacillus reuteri	CECT8605	SAMN06473517	-	Spain	Bos taurus	693	0	0	1	1.00
28	GCA_002128715.1	Limosilactobacillus reuteri	KLR2004	SAMN05751486	2015-01-22	South Korea	pig	693	1	0	1	1.41
29	GCA_012843635.1	Limosilactobacillus reuteri	WCA-386-APC-4I	SAMN14558267	2018-03-03	Germany	Sus scrofa domesticus	693	2	0	1	2.24
30	GCA_013348825.1	Limosilactobacillus reuteri	AN417	SAMN15162791	2016-05-03	South Korea:Jeollabuk-do, Gimje-si	Sus scrofa domesticus	693	2	0	0	2.00
31	GCA_020412465.1	Limosilactobacillus reuteri	19-E-6	SAMN21920643	2020-10-19	United Kingdom: England	Sus scrofa	693	0	0	0	0.00
32	GCA_020412485.1	Limosilactobacillus reuteri	19-E-3	SAMN21920642	2020-10-19	United Kingdom: England	Sus scrofa	693	0	0	0	0.00
33	GCA_020784355.1	Limosilactobacillus reuteri	S_1_1	SAMN22258659	2014-02	USA:Nebraska	Springhaas	693	0	0	1	1.00
34	GCA_020784395.1	Limosilactobacillus reuteri	S_9_1	SAMN22258661	2014-02	USA:Nebraska	Springhaas	693	0	0	1	1.00
35	GCA_020784415.1	Limosilactobacillus reuteri	S_5_1	SAMN22258660	2014-02	USA:Nebraska	Springhaas	693	0	0	1	1.00
36	GCA_023896335.1	Limosilactobacillus reuteri	PH-3	SAMN28100809	2022-03	Russia	-	693	0	0	1	1.00
37	GCA_026183435.1	Limosilactobacillus reuteri	BRD_L17	SAMN31580343	2022-08-12	South Korea:Kyungki	Canis lupus familiaris mixed breed	693	0	0	0	0.00
38	GCA_030226325.1	Limosilactobacillus reuteri	UMB5704	SAMN34998689	2019-10	USA: Maywood, IL	Homo sapiens	693	0	0	1	1.00
39	GCA_046937645.1	Limosilactobacillus reuteri subsp. suis	M981A	SAMN35847972	2019	Czech Republic	domestic pig	693	2	0	1	2.24
40	GCA_046937655.1	Limosilactobacillus reuteri subsp. suis	M984A	SAMN35847973	2019	Czech Republic	domestic pig	693	3	0	1	3.16
41	GCA_046937715.1	Limosilactobacillus reuteri subsp. suis	M990A	SAMN35847974	2019	Czech Republic	domestic pig	693	3	0	1	3.16
42	GCA_046938175.1	Limosilactobacillus reuteri subsp. suis	M770A	SAMN35847976	2019	Czech Republic	domestic pig	693	0	0	1	1.00
43	GCA_046938205.1	Limosilactobacillus reuteri subsp. suis	M773A	SAMN35847978	2019	Czech Republic	domestic pig	693	0	0	1	1.00
44	GCA_046938395.1	Limosilactobacillus reuteri subsp. suis	M744A	SAMN35847965	2019	Czech Republic	domestic pig	693	0	0	1	1.00
45	GCA_046938475.1	Limosilactobacillus reuteri subsp. suis	M726A	SAMN35847960	2019	Czech Republic	domestic pig	693	0	0	1	1.00
46	GCA_046938595.1	Limosilactobacillus reuteri subsp. suis	M721A	SAMN35847959	2019	Czech Republic	domestic pig	693	1	0	1	1.41
47	GCA_003703875.1	Limosilactobacillus reuteri	R2lc	SAMN08565493	-	-	rat	694	0	0	1	1.00
48	GCA_003719715.1	Limosilactobacillus reuteri	UBLRU-87	SAMN10246080	2008-10-16	India:Hyderabad	-	694	0	0	0	0.00
49	GCA_011009765.1	Limosilactobacillus reuteri	D4	SAMN10822529	2017	United Kingdom	Meles meles	694	1	0	1	1.41
50	GCA_020784235.1	Limosilactobacillus reuteri	LTM_Sauna_2_1	SAMN22258668	2014-02	USA:California	Lion-tailed Macaque	694	0	0	1	1.00
51	GCA_020784315.1	Limosilactobacillus reuteri	O_Tuki_6_1	SAMN22258669	2013-03	USA:Nebraska	Orangutan	694	0	0	1	1.00
52	GCA_020784715.1	Limosilactobacillus reuteri	O_Tuki_7_1	SAMN22258642	2013-03	USA:Nebraska	Orangutan	694	0	0	1	1.00
53	GCA_020784755.1	Limosilactobacillus reuteri	O_Ruby_9_1	SAMN22258641	2013-03	USA:Nebraska	Orangutan	694	0	0	1	1.00
54	GCA_020784775.1	Limosilactobacillus reuteri	O_Ruby_8_1	SAMN22258640	2013-03	USA:Nebraska	Orangutan	694	0	0	1	1.00
55	GCA_020785025.1	Limosilactobacillus reuteri	SM_1_4_1	SAMN22258628	2013-03	USA:California	Sulawesi Macaque	694	0	0	1	1.00
56	GCA_020785175.1	Limosilactobacillus reuteri	AG_2_6_1	SAMN22258619	2013-03	USA:Nebraska	Agile Gibbon	694	0	0	1	1.00
57	GCA_020785185.1	Limosilactobacillus reuteri	AG_3_1_1	SAMN22258620	2013-03	USA:Nebraska	Agile Gibbon	694	0	0	1	1.00
58	GCA_020785305.1	Limosilactobacillus reuteri	AG_1_1_1	SAMN22258618	2013-03	USA:Nebraska	Agile Gibbon	694	0	0	1	1.00
59	GCA_022586935.1	Limosilactobacillus reuteri	PB2	SAMN26510415	2021-10-07	Canada: London Ontario	-	694	0	0	1	1.00
60	GCA_025189665.1	Limosilactobacillus reuteri	CIRM-BIA 696	SAMN10365499	1972	France	-	694	0	0	1	1.00
61	GCA_036323925.1	Limosilactobacillus reuteri	LRA7	SAMN39585552	2022-07-20	China	dog	694	2	0	0	2.00
62	GCA_036903235.1	Limosilactobacillus reuteri	TPC32	SAMN39454010	2023-03-21	China: Xizang	Tibetan pigs	694	2	0	0	2.00
63	GCA_042464795.1	Limosilactobacillus reuteri	LDHa	SAMN43886048	2023-09-01	China:Guangzhou	-	694	0	0	0	0.00
64	GCA_042464815.1	Limosilactobacillus reuteri	LSHe	SAMN43882269	2023-09-01	China:Guangzhou	-	694	0	0	0	0.00
65	GCA_046937795.1	Limosilactobacillus reuteri subsp. suis	M963A	SAMN35847961	2019	Czech Republic	domestic pig	694	1	0	1	1.41
66	GCA_046937815.1	Limosilactobacillus reuteri subsp. suis	M966A	SAMN35847962	2019	Czech Republic	domestic pig	694	0	0	1	1.00
67	GCA_046937825.1	Limosilactobacillus reuteri subsp. suis	M838A	SAMN35847977	2019	Czech Republic	domestic pig	694	0	0	1	1.00
68	GCA_046937845.1	Limosilactobacillus reuteri subsp. suis	M978A	SAMN35847967	2019	Czech Republic	domestic pig	694	0	0	1	1.00
69	GCA_046937955.1	Limosilactobacillus reuteri subsp. suis	M832A	SAMN35847964	2019	Czech Republic	domestic pig	694	0	0	1	1.00
70	GCA_046938155.1	Limosilactobacillus reuteri subsp. suis	M778A	SAMN35847980	2019	Czech Republic	domestic pig	694	0	0	1	1.00
71	GCA_046938245.1	Limosilactobacillus reuteri subsp. suis	M751A	SAMN35847969	2019	Czech Republic	domestic pig	694	3	0	1	3.16
72	GCA_046938255.1	Limosilactobacillus reuteri subsp. suis	M767A	SAMN35847975	2019	Czech Republic	domestic pig	694	0	0	1	1.00
73	GCA_046938365.1	Limosilactobacillus reuteri subsp. suis	M758A	SAMN35847971	2019	Czech Republic	domestic pig	694	3	0	1	3.16
74	GCA_046938415.1	Limosilactobacillus reuteri subsp. suis	M755A	SAMN35847968	2019	Czech Republic	domestic pig	694	2	0	1	2.24
75	GCA_046938445.1	Limosilactobacillus reuteri subsp. suis	M746A	SAMN35847966	2019	Czech Republic	domestic pig	694	0	0	1	1.00
76	GCA_901971765.1	Limosilactobacillus reuteri	INIA P572	SAMEA5674231	2000	Spain	Sus scrofa domesticus	694	1	0	1	1.41
77	GCA_000712565.2	Limosilactobacillus reuteri	TMW1.656	SAMN02869563	1998	Germany	-	695	0	0	1	1.00
78	GCA_000722535.2	Limosilactobacillus reuteri	TMW1.112	SAMN02840984	1998	Germany	-	695	0	0	1	1.00
79	GCA_002128485.1	Limosilactobacillus reuteri	KLR1001	SAMN05751479	2006-06-20	South Korea	pig	695	3	0	1	3.16
80	GCA_002128515.1	Limosilactobacillus reuteri	KLR1002	SAMN05751480	2006-06-20	South Korea	pig	695	10	0	1	10.05
81	GCA_002128555.1	Limosilactobacillus reuteri	KLR2002	SAMN05751484	2014-11-13	South Korea	pig	695	6	0	1	6.08
82	GCA_002128585.1	Limosilactobacillus reuteri	KLR2003	SAMN05751485	2014-11-13	South Korea	pig	695	5	0	1	5.10
83	GCA_002128605.1	Limosilactobacillus reuteri	KLR2007	SAMN05751489	2015-03-08	South Korea	pig	695	2	0	1	2.24
84	GCA_002128635.1	Limosilactobacillus reuteri	KLR3003	SAMN05751493	2015-05-06	South Korea	pig	695	2	0	1	2.24
85	GCA_002128655.1	Limosilactobacillus reuteri	KLR3004	SAMN05751494	2015-06-24	South Korea	pig	695	2	0	1	2.24
86	GCA_002128745.1	Limosilactobacillus reuteri	KLR2008	SAMN05751490	2015-03-08	South Korea	pig	695	2	0	1	2.24
87	GCA_002128755.1	Limosilactobacillus reuteri	KLR2006	SAMN05751488	2015-03-08	South Korea	pig	695	4	0	1	4.12
88	GCA_002128765.1	Limosilactobacillus reuteri	KLR3006	SAMN05751496	2015-06-24	South Korea	pig	695	7	0	1	7.07
89	GCA_002253625.1	Limosilactobacillus reuteri	609i	SAMN06848403	2014-01-01	France	mouse	695	0	0	1	1.00
90	GCA_002253685.1	Limosilactobacillus reuteri	609e	SAMN06848402	2014-01-01	France	mouse	695	0	0	1	1.00
91	GCA_002253745.1	Limosilactobacillus reuteri	601l	SAMN06848400	2014-01-01	France	mouse	695	0	0	1	1.00
92	GCA_002253825.1	Limosilactobacillus reuteri	114h	SAMN06848393	2014-01-01	France	mouse	695	0	0	1	1.00
93	GCA_002253835.1	Limosilactobacillus reuteri	114g	SAMN06848392	2014-01-01	France	mouse	695	0	0	1	1.00
94	GCA_002253865.1	Limosilactobacillus reuteri	114q	SAMN06848394	2014-01-01	France	mouse	695	0	0	1	1.00
95	GCA_003053005.1	Limosilactobacillus reuteri	DS12_10	SAMN05942019	2016-03-06	USA:MD	Homo sapiens	695	0	0	1	1.00
96	GCA_020784295.1	Limosilactobacillus reuteri	M_2	SAMN22258662	-	Japan	Mouse	695	0	0	1	1.00
97	GCA_020784305.1	Limosilactobacillus reuteri	M_20	SAMN22258663	-	Japan	Mouse	695	0	0	1	1.00
98	GCA_020784835.1	Limosilactobacillus reuteri	MR6	SAMN22258638	-	USA	Monkey	695	0	0	1	1.00
99	GCA_020784845.1	Limosilactobacillus reuteri	MR2	SAMN22258637	-	USA	Monkey	695	0	0	1	1.00
100	GCA_020784945.1	Limosilactobacillus reuteri	6C	SAMN22258631	2015	Canada:Calgary	Mandrill	695	0	0	1	1.00