GCA_022713005.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDPMJJOCC_1 (original name was: gnl|Prokka|DPMJJOCC_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	49,666	90,835

gnlProkkaDPMJJOCC_2 (original name was: gnl|Prokka|DPMJJOCC_2)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	terpene	28,346	49,227

gnlProkkaDPMJJOCC_22 (original name was: gnl|Prokka|DPMJJOCC_22)

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	cyclic-lactone-autoinducer	1	13,209

gnlProkkaDPMJJOCC_27 (original name was: gnl|Prokka|DPMJJOCC_27)

Region	Type	From	To	Most similar known cluster		Similarity
Region 27.1	RiPP-like	1	11,435	coagulin	RiPP	80%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T3PKS	49,666	90,835
Region 2.1	terpene	28,346	49,227
Region 22.1	cyclic-lactone-autoinducer	1	13,209
Region 27.1	RiPP-like	1	11,435	coagulin	RiPP	80%

No secondary metabolite regions were found in these records:: gnlProkkaDPMJJOCC_3 (original name was: gnl|Prokka|DPMJJOCC_3); gnlProkkaDPMJJOCC_4 (original name was: gnl|Prokka|DPMJJOCC_4); gnlProkkaDPMJJOCC_5 (original name was: gnl|Prokka|DPMJJOCC_5); gnlProkkaDPMJJOCC_6 (original name was: gnl|Prokka|DPMJJOCC_6); gnlProkkaDPMJJOCC_7 (original name was: gnl|Prokka|DPMJJOCC_7); gnlProkkaDPMJJOCC_8 (original name was: gnl|Prokka|DPMJJOCC_8); gnlProkkaDPMJJOCC_9 (original name was: gnl|Prokka|DPMJJOCC_9); gnlProkkaDPMJJOCC_10 (original name was: gnl|Prokka|DPMJJOCC_10); gnlProkkaDPMJJOCC_11 (original name was: gnl|Prokka|DPMJJOCC_11); gnlProkkaDPMJJOCC_12 (original name was: gnl|Prokka|DPMJJOCC_12); gnlProkkaDPMJJOCC_13 (original name was: gnl|Prokka|DPMJJOCC_13); gnlProkkaDPMJJOCC_14 (original name was: gnl|Prokka|DPMJJOCC_14); gnlProkkaDPMJJOCC_15 (original name was: gnl|Prokka|DPMJJOCC_15); gnlProkkaDPMJJOCC_16 (original name was: gnl|Prokka|DPMJJOCC_16); gnlProkkaDPMJJOCC_17 (original name was: gnl|Prokka|DPMJJOCC_17); gnlProkkaDPMJJOCC_18 (original name was: gnl|Prokka|DPMJJOCC_18); gnlProkkaDPMJJOCC_19 (original name was: gnl|Prokka|DPMJJOCC_19); gnlProkkaDPMJJOCC_20 (original name was: gnl|Prokka|DPMJJOCC_20); gnlProkkaDPMJJOCC_21 (original name was: gnl|Prokka|DPMJJOCC_21); gnlProkkaDPMJJOCC_23 (original name was: gnl|Prokka|DPMJJOCC_23); gnlProkkaDPMJJOCC_24 (original name was: gnl|Prokka|DPMJJOCC_24); gnlProkkaDPMJJOCC_25 (original name was: gnl|Prokka|DPMJJOCC_25); gnlProkkaDPMJJOCC_26 (original name was: gnl|Prokka|DPMJJOCC_26); gnlProkkaDPMJJOCC_28 (original name was: gnl|Prokka|DPMJJOCC_28); gnlProkkaDPMJJOCC_29 (original name was: gnl|Prokka|DPMJJOCC_29); gnlProkkaDPMJJOCC_30 (original name was: gnl|Prokka|DPMJJOCC_30); gnlProkkaDPMJJOCC_31 (original name was: gnl|Prokka|DPMJJOCC_31); gnlProkkaDPMJJOCC_32 (original name was: gnl|Prokka|DPMJJOCC_32); gnlProkkaDPMJJOCC_33 (original name was: gnl|Prokka|DPMJJOCC_33); gnlProkkaDPMJJOCC_34 (original name was: gnl|Prokka|DPMJJOCC_34); gnlProkkaDPMJJOCC_35 (original name was: gnl|Prokka|DPMJJOCC_35); gnlProkkaDPMJJOCC_36 (original name was: gnl|Prokka|DPMJJOCC_36); gnlProkkaDPMJJOCC_37 (original name was: gnl|Prokka|DPMJJOCC_37); gnlProkkaDPMJJOCC_38 (original name was: gnl|Prokka|DPMJJOCC_38); gnlProkkaDPMJJOCC_39 (original name was: gnl|Prokka|DPMJJOCC_39); gnlProkkaDPMJJOCC_40 (original name was: gnl|Prokka|DPMJJOCC_40); gnlProkkaDPMJJOCC_41 (original name was: gnl|Prokka|DPMJJOCC_41); gnlProkkaDPMJJOCC_42 (original name was: gnl|Prokka|DPMJJOCC_42); gnlProkkaDPMJJOCC_43 (original name was: gnl|Prokka|DPMJJOCC_43); gnlProkkaDPMJJOCC_45 (original name was: gnl|Prokka|DPMJJOCC_45); gnlProkkaDPMJJOCC_51 (original name was: gnl|Prokka|DPMJJOCC_51); gnlProkkaDPMJJOCC_52 (original name was: gnl|Prokka|DPMJJOCC_52); gnlProkkaDPMJJOCC_53 (original name was: gnl|Prokka|DPMJJOCC_53); gnlProkkaDPMJJOCC_54 (original name was: gnl|Prokka|DPMJJOCC_54)

Compact view

gnlProkkaDPMJJOCC_1 - Region 1 - T3PKS

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Location: 49,666 - 90,835 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

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Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDPMJJOCC_2 - Region 1 - terpene

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Location: 28,346 - 49,227 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDPMJJOCC_22 - Region 1 - cyclic-lactone-autoinducer

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Location: 1 - 13,209 nt. (total: 13,209 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDPMJJOCC_27 - Region 1 - RiPP-like

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Location: 1 - 11,435 nt. (total: 11,435 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1