GCA_022714905.1 - 6 region(s)

Identified primary metabolite regions

c00014_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_14)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 14.1	Pyruvate2acetate-formate	SCFA	5,476	28,451	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

c00023_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_23)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 23.1	TPP_fatty_acids	Putative	6,982	31,839

c00034_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_34)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 34.1	TPP_AA_metabolism	Putative	54,796	79,726

c00050_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_50)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 50.1	Rnf_complex	E-MGC	4,563	29,624	Rnf complex C. sporogenes	RNF	83%

c00118_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_118)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 118.1	succinate2propionate	SCFA	1	17,125	Succinate to propionate B. theta	PRO	50%

c00178_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_178)

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 178.1	Fumarate2succinate	SCFA	27,432	50,902	Fumarate to succinate B. thetaiotaomicron	SUC	100%

No primary metabolite regions were found in these records:: c00001_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_1); c00002_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_2); c00003_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_3); c00004_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_4); c00005_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_5); c00006_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_6); c00007_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_7); c00008_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_8); c00009_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_9); c00010_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_10); c00011_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_11); c00012_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_12); c00013_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_13); c00015_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_15); c00016_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_16); c00017_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_17); c00018_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_18); c00019_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_19); c00020_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_20); c00021_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_21); c00022_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_22); c00024_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_24); c00025_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_25); c00026_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_26); c00027_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_27); c00028_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_28); c00029_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_29); c00030_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_30); c00031_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_31); c00032_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_32); c00033_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_33); c00035_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_35); c00036_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_36); c00037_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_37); c00038_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_38); c00039_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_39); c00040_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_40); c00041_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_41); c00042_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_42); c00043_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_43); c00044_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_44); c00045_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_45); c00046_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_46); c00047_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_47); c00048_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_48); c00049_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_49); c00051_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_51); c00052_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_52); c00053_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_53); c00054_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_54); c00055_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_55); c00056_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_56); c00057_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_57); c00058_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_58); c00059_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_59); c00060_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_60); c00061_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_61); c00062_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_62); c00063_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_63); c00064_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_64); c00065_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_65); c00066_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_66); c00067_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_67); c00068_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_68); c00069_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_69); c00070_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_70); c00071_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_71); c00072_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_72); c00073_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_73); c00074_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_74); c00075_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_75); c00076_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_76); c00077_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_77); c00078_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_78); c00079_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_79); c00080_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_80); c00081_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_81); c00082_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_82); c00083_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_83); c00084_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_84); c00085_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_85); c00086_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_86); c00087_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_87); c00088_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_88); c00089_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_89); c00090_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_90); c00091_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_91); c00092_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_92); c00093_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_93); c00094_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_94); c00095_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_95); c00096_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_96); c00097_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_97); c00098_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_98); c00099_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_99); c00100_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_100); c00101_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_101); c00102_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_102); c00103_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_103); c00104_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_104); c00105_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_105); c00106_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_106); c00107_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_107); c00108_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_108); c00109_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_109); c00110_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_110); c00111_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_111); c00112_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_112); c00113_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_113); c00114_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_114); c00115_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_115); c00116_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_116); c00117_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_117); c00119_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_119); c00120_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_120); c00121_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_121); c00122_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_122); c00123_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_123); c00124_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_124); c00125_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_125); c00126_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_126); c00127_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_127); c00128_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_128); c00129_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_129); c00130_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_130); c00131_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_131); c00132_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_132); c00133_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_133); c00134_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_134); c00135_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_135); c00136_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_136); c00137_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_137); c00138_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_138); c00139_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_139); c00140_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_140); c00141_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_141); c00142_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_142); c00143_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_143); c00144_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_144); c00145_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_145); c00146_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_146); c00147_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_147); c00148_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_148); c00149_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_149); c00150_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_150); c00151_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_151); c00152_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_152); c00153_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_153); c00154_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_154); c00155_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_155); c00156_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_156); c00157_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_157); c00158_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_158); c00159_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_159); c00160_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_160); c00161_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_161); c00162_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_162); c00163_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_163); c00164_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_164); c00165_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_165); c00166_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_166); c00167_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_167); c00168_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_168); c00169_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_169); c00170_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_170); c00171_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_171); c00172_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_172); c00173_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_173); c00174_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_174); c00175_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_175); c00176_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_176); c00177_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_177); c00179_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_179); c00180_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_180); c00181_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_181); c00182_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_182); c00183_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_183); c00184_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_184); c00185_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_185); c00186_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_186); c00187_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_187); c00188_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_188); c00189_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_189); c00190_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_190); c00191_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_191); c00192_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_192); c00193_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_193); c00194_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_194); c00195_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_195); c00196_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_196); c00197_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_197); c00198_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_198); c00199_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_199); c00200_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_200); c00201_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_201); c00202_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_202); c00203_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_203); c00204_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_204); c00205_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_205); c00206_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_206); c00207_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_207); c00208_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_208); c00209_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_209); c00210_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_210); c00211_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_211); c00212_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_212); c00213_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_213); c00214_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_214); c00215_gnlPro.. (original name was: gnl|Prokka|FFOADJAA_215)

Compact view

c00014_gnlPro.. - Region 1 - Pyruvate2acetate-formate

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Location: 5,476 - 28,451 nt. (total: 22,976 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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c00023_gnlPro.. - Region 1 - TPP_fatty_acids

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Location: 6,982 - 31,839 nt. (total: 24,858 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

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Similar known gene clusters

No matches found.

c00034_gnlPro.. - Region 1 - TPP_AA_metabolism

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Location: 54,796 - 79,726 nt. (total: 24,931 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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No matches found.

c00050_gnlPro.. - Region 1 - Rnf_complex

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Location: 4,563 - 29,624 nt. (total: 25,062 nt) Show pHMM detection rules used

Rnf_complex: (Complex1_51K and minimum(5, [FMN_bind, FeS, Fer4, Fer4_9, NQR2_RnfD_RnfE, Rnf-Nqr, RnfC_N, SLBB]))

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core biosynthetic genes

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Gene details

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c00118_gnlPro.. - Region 1 - succinate2propionate

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Location: 1 - 17,125 nt. (total: 17,125 nt) Show pHMM detection rules used

Region on contig edge.

succinate2propionate: (minimum(4, [AcetylCoA_hyd_C, AcetylCoA_hydro, B12-binding, Biotin_lipoyl, Glyoxalase_4, HMGL-like, MM_CoA_mutase, MeaB, OAD_beta, OAD_gamma, PYC_OADA]) and minimum(1, [CT_Btheta, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, CT_Vparvula]) and not Cytidylate_kin)

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KnownClusterBlast

Similar known gene clusters

c00178_gnlPro.. - Region 1 - Fumarate2succinate

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Location: 27,432 - 50,902 nt. (total: 23,471 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

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resistance genes

encapsulation genes

electron transport genes

other genes

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KnownClusterBlast

Similar known gene clusters