## Tue Jul 2 20:29:41 2024 ## emapper-2.1.12 ## /d223NFS/m128030022/anaconda3/envs/eggnog/bin/emapper.py -i /d223NFS/m128030014/NGP/gene_list/prokka_results/GCA_022737295.1/GCA_022737295.1.faa --temp_dir /d223NFS/m128030022/NGPs/NGPs_new/databases/NGPs_DB/NGPs_db/GCA_022737295.1/2.eggNOGmapper --output_dir /d223NFS/m128030022/NGPs/NGPs_new/databases/NGPs_DB/NGPs_db/GCA_022737295.1/2.eggNOGmapper --output eggNOG_out --override --cpu 20 -m diamond --sensmode fast ## #query seed_ortholog evalue score eggNOG_OGs max_annot_lvl COG_category Description Preferred_name GOs EC KEGG_ko KEGG_Pathway KEGG_Module KEGG_Reaction KEGG_rclass BRITE KEGG_TC CAZy BiGG_Reaction PFAMs BECNEDJF_00001 1122931.AUAE01000036_gene1059 3.84e-117 337.0 COG1047@1|root,COG1047@2|Bacteria,4NM29@976|Bacteroidetes,2FM08@200643|Bacteroidia,22XMB@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidyl-prolyl cis-trans isomerase slyD - 5.2.1.8 ko:K03775 - - - - ko00000,ko01000,ko03110 - - - FKBP_C BECNEDJF_00002 411477.PARMER_03797 8.27e-313 850.0 COG1168@1|root,COG1168@2|Bacteria,4NETH@976|Bacteroidetes,2FMIZ@200643|Bacteroidia,22WVZ@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II patB - 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 - R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_00003 999419.HMPREF1077_02292 0.0 1188.0 COG0129@1|root,COG0129@2|Bacteria,4NFHP@976|Bacteroidetes,2FMCC@200643|Bacteroidia,22WXM@171551|Porphyromonadaceae 976|Bacteroidetes EG Belongs to the IlvD Edd family ilvD - 4.2.1.9 ko:K01687 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R01209,R04441,R05070 RC00468,RC01714 ko00000,ko00001,ko00002,ko01000 - - - ILVD_EDD BECNEDJF_00004 411477.PARMER_03799 0.0 1115.0 COG0028@1|root,COG0028@2|Bacteria,4NENG@976|Bacteroidetes,2FMMH@200643|Bacteroidia,22WKA@171551|Porphyromonadaceae 976|Bacteroidetes H Acetolactate synthase, large subunit ilvB - 2.2.1.6 ko:K01652 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M,TPP_enzyme_N BECNEDJF_00005 411477.PARMER_03800 4.09e-119 341.0 COG0440@1|root,COG0440@2|Bacteria,4NIDK@976|Bacteroidetes,2FNQ4@200643|Bacteroidia,22XTP@171551|Porphyromonadaceae 976|Bacteroidetes E synthase small subunit ilvN - 2.2.1.6 ko:K01653 ko00290,ko00650,ko00660,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00650,map00660,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R00006,R00014,R00226,R03050,R04672,R04673,R08648 RC00027,RC00106,RC01192,RC02744,RC02893 ko00000,ko00001,ko00002,ko01000 - - - ACT,ACT_5,ALS_ss_C BECNEDJF_00006 411477.PARMER_03801 2.88e-182 506.0 COG3884@1|root,COG3884@2|Bacteria,4NMMY@976|Bacteroidetes,2FQ43@200643|Bacteroidia,22Y3B@171551|Porphyromonadaceae 976|Bacteroidetes I Acyl-ACP thioesterase - - 3.1.2.21 ko:K01071 ko00061,ko01100,map00061,map01100 - R04014,R08157,R08158 RC00014,RC00039 ko00000,ko00001,ko01000,ko01004 - - - Acyl-ACP_TE BECNEDJF_00007 411477.PARMER_03802 2.13e-255 699.0 COG0059@1|root,COG0059@2|Bacteria,4NFYV@976|Bacteroidetes,2FN0U@200643|Bacteroidia,22W57@171551|Porphyromonadaceae 976|Bacteroidetes E Ketol-acid reductoisomerase ilvC - 1.1.1.86 ko:K00053 ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00570 R03051,R04439,R04440,R05068,R05069,R05071 RC00726,RC00836,RC00837,RC01726 ko00000,ko00001,ko00002,ko01000 - - - IlvC,IlvN BECNEDJF_00008 411477.PARMER_03804 1.04e-290 792.0 COG1409@1|root,COG1409@2|Bacteria,4NG8Q@976|Bacteroidetes,2G35U@200643|Bacteroidia,22ZKG@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N BECNEDJF_00009 999419.HMPREF1077_01847 4.53e-207 602.0 COG3250@1|root,COG3250@2|Bacteria,4NFE8@976|Bacteroidetes,2FPEC@200643|Bacteroidia,22WHR@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 2, sugar binding domain protein - - - - - - - - - - - - Glyco_hydro_106,Glyco_hydro_2_N BECNEDJF_00010 411477.PARMER_01634 0.0 1041.0 COG0591@1|root,COG3055@1|root,COG0591@2|Bacteria,COG3055@2|Bacteria,4NEN8@976|Bacteroidetes,2FPDT@200643|Bacteroidia,22Y18@171551|Porphyromonadaceae 976|Bacteroidetes E Sodium:solute symporter family - - - - - - - - - - - - Kelch_1,Kelch_5,SSF BECNEDJF_00011 411477.PARMER_04088 0.0 1041.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,22WUY@171551|Porphyromonadaceae 976|Bacteroidetes L COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 BECNEDJF_00013 411477.PARMER_04121 7e-142 400.0 28H5J@1|root,2Z7I5@2|Bacteria,4NHK6@976|Bacteroidetes,2FM8F@200643|Bacteroidia,22XQ4@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4290) - - - - - - - - - - - - DUF4290 BECNEDJF_00014 411477.PARMER_04120 1.19e-312 852.0 COG0766@1|root,COG0766@2|Bacteria,4NDV8@976|Bacteroidetes,2FNYN@200643|Bacteroidia,22WZU@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine murA - 2.5.1.7 ko:K00790 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R00660 RC00350 ko00000,ko00001,ko01000,ko01011 - - - EPSP_synthase BECNEDJF_00015 411477.PARMER_04119 4.7e-120 343.0 COG0806@1|root,COG0806@2|Bacteria,4NQF0@976|Bacteroidetes,2FMK1@200643|Bacteroidia,22YBJ@171551|Porphyromonadaceae 976|Bacteroidetes J An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes rimM - - ko:K02860 - - - - ko00000,ko03009 - - - PRC,RimM BECNEDJF_00016 411477.PARMER_04118 1.32e-193 538.0 COG0739@1|root,COG0739@2|Bacteria,4NFZN@976|Bacteroidetes,2FMIQ@200643|Bacteroidia,22XKT@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 nlpD_1 - - - - - - - - - - - Peptidase_M23 BECNEDJF_00017 411477.PARMER_04117 4.76e-268 734.0 COG0743@1|root,COG0743@2|Bacteria,4NG0S@976|Bacteroidetes,2FN5M@200643|Bacteroidia,22W5M@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate (MEP) dxr GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006721,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016114,GO:0016491,GO:0016614,GO:0016616,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0030145,GO:0030604,GO:0032787,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046490,GO:0046872,GO:0046914,GO:0048037,GO:0050661,GO:0050662,GO:0051483,GO:0051484,GO:0055114,GO:0070402,GO:0071704,GO:0090407,GO:0097159,GO:1901135,GO:1901265,GO:1901363,GO:1901576 1.1.1.267 ko:K00099 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05688 RC01452 ko00000,ko00001,ko00002,ko01000 - - - DXPR_C,DXP_redisom_C,DXP_reductoisom BECNEDJF_00019 411477.PARMER_04116 0.0 887.0 COG0750@1|root,COG0750@2|Bacteria,4NEAR@976|Bacteroidetes,2FM5E@200643|Bacteroidia,22X5U@171551|Porphyromonadaceae 976|Bacteroidetes M zinc metalloprotease rseP - - ko:K11749 ko02024,ko04112,map02024,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_M50 BECNEDJF_00020 411477.PARMER_04115 3.56e-161 451.0 COG0132@1|root,COG0132@2|Bacteria,4NGKI@976|Bacteroidetes,2FM6V@200643|Bacteroidia,22XR0@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring bioD - 6.3.3.3 ko:K01935 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03182 RC00868 ko00000,ko00001,ko00002,ko01000 - - - AAA_26 BECNEDJF_00021 411477.PARMER_04114 3.03e-181 504.0 COG4106@1|root,COG4106@2|Bacteria,4PKFJ@976|Bacteroidetes,2G3FE@200643|Bacteroidia,22Y6P@171551|Porphyromonadaceae 976|Bacteroidetes H Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl- L-methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway bioC - 2.1.1.197 ko:K02169 ko00780,ko01100,map00780,map01100 M00572 R09543 RC00003,RC00460 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_11,Methyltransf_23 BECNEDJF_00022 411477.PARMER_04113 2.95e-167 466.0 COG2830@1|root,COG2830@2|Bacteria,4NSQK@976|Bacteroidetes,2FTTG@200643|Bacteroidia,22YIE@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF452) - - 3.1.1.85 ko:K09789 ko00780,ko01100,map00780,map01100 M00572 R09725 RC00460,RC00461 ko00000,ko00001,ko00002,ko01000 - - - DUF452 BECNEDJF_00023 411477.PARMER_04112 6.55e-273 746.0 COG0156@1|root,COG0156@2|Bacteria,4NEXI@976|Bacteroidetes,2FM2U@200643|Bacteroidia,22X1Z@171551|Porphyromonadaceae 976|Bacteroidetes E 8-amino-7-oxononanoate synthase bioF - 2.3.1.29,2.3.1.47 ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 M00123,M00573,M00577 R00371,R03210,R10124 RC00004,RC00039,RC00394,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_00024 411477.PARMER_04111 4.51e-57 188.0 COG0161@1|root,COG0161@2|Bacteria,4NEJN@976|Bacteroidetes,2FNNH@200643|Bacteroidia,22W4J@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor bioA - 2.6.1.62 ko:K00833 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R03231 RC00006,RC00887 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 BECNEDJF_00025 449673.BACSTE_00239 4.46e-194 539.0 COG3344@1|root,COG3344@2|Bacteria,4NPBY@976|Bacteroidetes,2G34M@200643|Bacteroidia,4AW9M@815|Bacteroidaceae 976|Bacteroidetes L Reverse transcriptase (RNA-dependent DNA polymerase) - - 2.7.7.49 ko:K00986 - - - - ko00000,ko01000 - - - RVT_1 BECNEDJF_00026 449673.BACSTE_00238 9.83e-27 99.4 2A8B6@1|root,30XCR@2|Bacteria,4PASM@976|Bacteroidetes,2FZE8@200643|Bacteroidia,4AUUS@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00028 435591.BDI_0278 9.9e-209 605.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22ZQS@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00030 411477.PARMER_01557 4.94e-146 410.0 COG0164@1|root,COG0164@2|Bacteria,4NGVR@976|Bacteroidetes,2FMS7@200643|Bacteroidia,22WJC@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease that specifically degrades the RNA of RNA- DNA hybrids rnhB GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004523,GO:0004540,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006273,GO:0006281,GO:0006298,GO:0006401,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0019439,GO:0022616,GO:0032299,GO:0032991,GO:0033554,GO:0033567,GO:0034641,GO:0034645,GO:0034655,GO:0043137,GO:0043170,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044464,GO:0046483,GO:0046700,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0140098,GO:1901360,GO:1901361,GO:1901575,GO:1901576 3.1.26.4 ko:K03470 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - RNase_HII BECNEDJF_00031 411477.PARMER_01555 4.41e-33 117.0 COG2166@1|root,COG2166@2|Bacteria,4NM9N@976|Bacteroidetes,2FSRV@200643|Bacteroidia,22XYC@171551|Porphyromonadaceae 976|Bacteroidetes S Fe-S metabolism sufE - - ko:K02426 - - - - ko00000 - - - SufE BECNEDJF_00032 411477.PARMER_02711 1.45e-81 249.0 COG3712@1|root,COG3712@2|Bacteria,4NJY6@976|Bacteroidetes,2G303@200643|Bacteroidia,22XZK@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_00033 411477.PARMER_02712 0.0 2220.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22XIY@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00034 411477.PARMER_02713 0.0 1326.0 COG0614@1|root,COG0702@1|root,COG0614@2|Bacteria,COG0702@2|Bacteria,4NFDZ@976|Bacteroidetes,2G094@200643|Bacteroidia 976|Bacteroidetes P SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00035 411477.PARMER_02714 8.66e-277 756.0 COG1409@1|root,COG1409@2|Bacteria,4NUQV@976|Bacteroidetes,2FTMD@200643|Bacteroidia 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos BECNEDJF_00036 411477.PARMER_02715 8.82e-227 626.0 COG2220@1|root,COG2220@2|Bacteria,4NMHS@976|Bacteroidetes 976|Bacteroidetes S Zn-dependent hydrolases of the beta-lactamase fold - - - - - - - - - - - - Lactamase_B_3 BECNEDJF_00037 411477.PARMER_02724 2.16e-198 549.0 COG0657@1|root,COG0657@2|Bacteria,4NH62@976|Bacteroidetes,2FKYA@200643|Bacteroidia,22XNS@171551|Porphyromonadaceae 976|Bacteroidetes I alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_3,Peptidase_S9 BECNEDJF_00039 411477.PARMER_02570 0.0 1093.0 COG2985@1|root,COG2985@2|Bacteria,4NHM3@976|Bacteroidetes,2FQ85@200643|Bacteroidia,22X4N@171551|Porphyromonadaceae 976|Bacteroidetes S Predicted Permease Membrane Region aspT - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C BECNEDJF_00040 411477.PARMER_02571 0.0 1107.0 COG0436@1|root,COG0436@2|Bacteria,4NH2Y@976|Bacteroidetes,2FPZN@200643|Bacteroidia,22X90@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II aspD - 4.1.1.12 ko:K09758 ko00250,ko00270,ko01100,ko01230,map00250,map00270,map01100,map01230 - R00397,R00863 RC00282,RC00399,RC00400 ko00000,ko00001,ko01000 - - - Aminotran_1_2 BECNEDJF_00041 411477.PARMER_02572 0.0 1485.0 COG1048@1|root,COG1048@2|Bacteria,4NDZT@976|Bacteroidetes,2FMDQ@200643|Bacteroidia,22XBN@171551|Porphyromonadaceae 976|Bacteroidetes C aconitate hydratase acnA - 4.2.1.3 ko:K01681 ko00020,ko00630,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00173,M00740 R01324,R01325,R01900 RC00497,RC00498,RC00618 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase,Aconitase_C BECNEDJF_00042 411477.PARMER_02573 2.96e-303 827.0 COG0538@1|root,COG0538@2|Bacteria,4PKW6@976|Bacteroidetes,2FKYF@200643|Bacteroidia,22WNM@171551|Porphyromonadaceae 976|Bacteroidetes C Isocitrate/isopropylmalate dehydrogenase icd - 1.1.1.42 ko:K00031 ko00020,ko00480,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,ko04146,map00020,map00480,map00720,map01100,map01110,map01120,map01130,map01200,map01210,map01230,map04146 M00009,M00010,M00173,M00740 R00267,R00268,R01899 RC00001,RC00084,RC00114,RC00626,RC02801 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh BECNEDJF_00043 411477.PARMER_02574 0.0 884.0 COG0372@1|root,COG0372@2|Bacteria,4NFXK@976|Bacteroidetes,2FPF3@200643|Bacteroidia,22VZ6@171551|Porphyromonadaceae 976|Bacteroidetes C Citrate synthase, C-terminal domain prpC - 2.3.3.1,2.3.3.5 ko:K01647,ko:K01659 ko00020,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,ko01210,ko01230,map00020,map00630,map00640,map01100,map01110,map01120,map01130,map01200,map01210,map01230 M00009,M00010,M00012,M00740 R00351,R00931 RC00004,RC00067,RC00406,RC02827 br01601,ko00000,ko00001,ko00002,ko01000 - - - Citrate_synt BECNEDJF_00045 411477.PARMER_02576 1.54e-35 120.0 2EG1V@1|root,339TV@2|Bacteria,4NX9J@976|Bacteroidetes,2FUKH@200643|Bacteroidia,22YXD@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4250) - - - - - - - - - - - - DUF4250 BECNEDJF_00046 411477.PARMER_02577 3.57e-74 222.0 2ET8R@1|root,33KST@2|Bacteria,4NYBM@976|Bacteroidetes,2FVFI@200643|Bacteroidia,231AH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00047 411477.PARMER_02579 2.62e-200 554.0 COG0627@1|root,COG0627@2|Bacteria,4NE7D@976|Bacteroidetes,2FM9S@200643|Bacteroidia,22W0W@171551|Porphyromonadaceae 976|Bacteroidetes S Putative esterase - - 3.1.2.12 ko:K01070 ko00680,ko01120,ko01200,map00680,map01120,map01200 - R00527 RC00167,RC00320 ko00000,ko00001,ko01000 - CE1 - Esterase BECNEDJF_00048 411477.PARMER_03167 1.19e-40 135.0 COG3630@1|root,COG3630@2|Bacteria,4NXVZ@976|Bacteroidetes,2FTVB@200643|Bacteroidia,22Z2E@171551|Porphyromonadaceae 976|Bacteroidetes C Oxaloacetate decarboxylase, gamma chain - - 4.1.1.3 ko:K01573 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_gamma BECNEDJF_00049 411477.PARMER_00944 1.65e-166 473.0 COG2204@1|root,COG2204@2|Bacteria,4NDWI@976|Bacteroidetes,2FMNM@200643|Bacteroidia,22WGW@171551|Porphyromonadaceae 976|Bacteroidetes K ATPase (AAA fhlA - - - - - - - - - - - HTH_8,Sigma54_activat BECNEDJF_00050 411477.PARMER_00945 1.7e-107 311.0 2CADI@1|root,32RR7@2|Bacteria,4NP51@976|Bacteroidetes,2FSVU@200643|Bacteroidia,22XZJ@171551|Porphyromonadaceae 976|Bacteroidetes S Lipopolysaccharide-assembly lptE - - - - - - - - - - - LptE BECNEDJF_00051 411477.PARMER_00946 3.67e-178 496.0 28HHN@1|root,2Z7TA@2|Bacteria,4NEXR@976|Bacteroidetes,2FQ6G@200643|Bacteroidia,22Y7B@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_00052 411477.PARMER_00947 5.75e-72 217.0 COG1314@1|root,COG1314@2|Bacteria,4NUYQ@976|Bacteroidetes,2FSK4@200643|Bacteroidia,22YIT@171551|Porphyromonadaceae 976|Bacteroidetes U Preprotein translocase secG - - ko:K03075 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecG BECNEDJF_00053 411477.PARMER_00948 4.26e-69 208.0 2E5N7@1|root,330D0@2|Bacteria,4NTFC@976|Bacteroidetes,2FU36@200643|Bacteroidia,22YHF@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4491) - - - - - - - - - - - - DUF4491 BECNEDJF_00054 411477.PARMER_00949 4.24e-40 134.0 2EHID@1|root,33BAB@2|Bacteria,4NZER@976|Bacteroidetes,2FVZ7@200643|Bacteroidia,22Z0N@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00055 411477.PARMER_00950 1.02e-68 207.0 293FN@1|root,2ZQY2@2|Bacteria,4P7JA@976|Bacteroidetes,2FVVX@200643|Bacteroidia,2319M@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00058 411477.PARMER_00955 1.28e-113 325.0 COG0054@1|root,COG0054@2|Bacteria,4NNUC@976|Bacteroidetes,2FNGS@200643|Bacteroidia,22XPW@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the formation of 6,7-dimethyl-8- ribityllumazine by condensation of 5-amino-6-(D- ribitylamino)uracil with 3,4-dihydroxy-2-butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin ribH GO:0000906,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006766,GO:0006767,GO:0006771,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042726,GO:0042727,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.78 ko:K00794 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R04457 RC00960 ko00000,ko00001,ko00002,ko01000 - - - DMRL_synthase BECNEDJF_00059 411477.PARMER_00956 5.86e-157 441.0 COG0457@1|root,COG0457@2|Bacteria,4PKF6@976|Bacteroidetes,2FNWT@200643|Bacteroidia,22XM8@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_12,TPR_16,TPR_2,TPR_6,TPR_7,TPR_8 BECNEDJF_00060 411477.PARMER_00957 5.95e-263 720.0 COG1195@1|root,COG1195@2|Bacteria,4NFHN@976|Bacteroidetes,2FMHP@200643|Bacteroidia,22W50@171551|Porphyromonadaceae 976|Bacteroidetes L it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP recF - - ko:K03629 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - SMC_N BECNEDJF_00061 411477.PARMER_00958 1.17e-61 189.0 COG5512@1|root,COG5512@2|Bacteria,4NSDR@976|Bacteroidetes,2FUN4@200643|Bacteroidia,22YQJ@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF721) - - - - - - - - - - - - DUF721 BECNEDJF_00062 411477.PARMER_00959 4.99e-88 258.0 COG3339@1|root,COG3339@2|Bacteria,4NVY8@976|Bacteroidetes,2FUXD@200643|Bacteroidia,22Z0P@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1232) - - - - - - - - - - - - DUF1232 BECNEDJF_00063 999419.HMPREF1077_00734 2.6e-107 310.0 COG0212@1|root,COG0212@2|Bacteria,4NQRG@976|Bacteroidetes,2FQQB@200643|Bacteroidia,22Y6E@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the 5-formyltetrahydrofolate cyclo-ligase family fthC - 6.3.3.2 ko:K01934 ko00670,ko01100,map00670,map01100 - R02301 RC00183 ko00000,ko00001,ko01000 - - - 5-FTHF_cyc-lig BECNEDJF_00064 411477.PARMER_00961 0.0 1147.0 COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,2FP0Y@200643|Bacteroidia,22W6I@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the peptidase S41A family ctp - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 BECNEDJF_00065 411477.PARMER_00962 2.78e-98 285.0 COG2131@1|root,COG2131@2|Bacteria,4NM48@976|Bacteroidetes,2FRZ1@200643|Bacteroidia,22XV8@171551|Porphyromonadaceae 976|Bacteroidetes F deaminase comEB - 3.5.4.12 ko:K01493 ko00240,ko01100,map00240,map01100 M00429 R01663 RC00074 ko00000,ko00001,ko00002,ko01000,ko02044 - - - dCMP_cyt_deam_1 BECNEDJF_00066 411477.PARMER_00963 6.59e-85 268.0 COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,2FN8J@200643|Bacteroidia,22X1E@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase dcp - 3.4.15.5,3.4.24.70 ko:K01284,ko:K01414 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 BECNEDJF_00068 1121098.HMPREF1534_03644 5.41e-28 101.0 2FG66@1|root,3482M@2|Bacteria,4P6FM@976|Bacteroidetes,2FURG@200643|Bacteroidia,4ASD8@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00069 1121098.HMPREF1534_03643 1.26e-148 417.0 COG0454@1|root,COG0454@2|Bacteria,4NPC8@976|Bacteroidetes,2FR43@200643|Bacteroidia,4ANMC@815|Bacteroidaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_00070 1235803.C825_01073 2.12e-58 180.0 COG0185@1|root,COG0185@2|Bacteria,4NQ8T@976|Bacteroidetes,2FT46@200643|Bacteroidia,22Y5Y@171551|Porphyromonadaceae 976|Bacteroidetes J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA rpsS GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - ko:K02965 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S19 BECNEDJF_00071 435591.BDI_2375 1.07e-89 263.0 COG0091@1|root,COG0091@2|Bacteria,4NQ8E@976|Bacteroidetes,2FS3J@200643|Bacteroidia,22XWQ@171551|Porphyromonadaceae 976|Bacteroidetes J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome rplV - - ko:K02890 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L22 BECNEDJF_00072 435591.BDI_2374 2.57e-168 471.0 COG0092@1|root,COG0092@2|Bacteria,4NE9F@976|Bacteroidetes,2FMYX@200643|Bacteroidia,22W3B@171551|Porphyromonadaceae 976|Bacteroidetes J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation rpsC GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02982 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KH_2,Ribosomal_S3_C BECNEDJF_00073 435591.BDI_2373 2.78e-98 285.0 COG0197@1|root,COG0197@2|Bacteria,4NM87@976|Bacteroidetes,2FRZE@200643|Bacteroidia,22XNJ@171551|Porphyromonadaceae 976|Bacteroidetes J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs rplP GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - ko:K02878 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L16 BECNEDJF_00074 435591.BDI_2372 1.02e-34 119.0 COG0255@1|root,COG0255@2|Bacteria,4NUSC@976|Bacteroidetes,2FUJB@200643|Bacteroidia,22YR4@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the universal ribosomal protein uL29 family rpmC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02904 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L29 BECNEDJF_00075 435591.BDI_2371 1.72e-53 167.0 COG0186@1|root,COG0186@2|Bacteria,4NSB2@976|Bacteroidetes,2FTXY@200643|Bacteroidia,22YB5@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA rpsQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02961 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S17 BECNEDJF_00076 435591.BDI_2370 1.13e-77 231.0 COG0093@1|root,COG0093@2|Bacteria,4NNM6@976|Bacteroidetes,2FSG8@200643|Bacteroidia,22XX5@171551|Porphyromonadaceae 976|Bacteroidetes J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome rplN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - ko:K02874 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L14 BECNEDJF_00077 435591.BDI_2369 7.55e-69 208.0 COG0198@1|root,COG0198@2|Bacteria,4NSTI@976|Bacteroidetes,2FT5V@200643|Bacteroidia,22Y4Z@171551|Porphyromonadaceae 976|Bacteroidetes J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit rplX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02895 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KOW,ribosomal_L24 BECNEDJF_00078 435591.BDI_2368 2.56e-123 352.0 COG0094@1|root,COG0094@2|Bacteria,4NEGY@976|Bacteroidetes,2FM5Y@200643|Bacteroidia,22VVF@171551|Porphyromonadaceae 976|Bacteroidetes J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits rplE GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02931 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L5,Ribosomal_L5_C BECNEDJF_00079 435591.BDI_2367 1.96e-54 170.0 COG0199@1|root,COG0199@2|Bacteria,4NQ6N@976|Bacteroidetes,2FTD0@200643|Bacteroidia,22Y99@171551|Porphyromonadaceae 976|Bacteroidetes J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site rpsN GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02954 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S14 BECNEDJF_00080 411477.PARMER_03749 3.51e-88 259.0 COG0096@1|root,COG0096@2|Bacteria,4NNFW@976|Bacteroidetes,2FRZ6@200643|Bacteroidia,22Y1I@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit rpsH GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02994 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S8 BECNEDJF_00081 411477.PARMER_03750 8.32e-128 363.0 COG0097@1|root,COG0097@2|Bacteria,4NGJM@976|Bacteroidetes,2FNEG@200643|Bacteroidia,22WAQ@171551|Porphyromonadaceae 976|Bacteroidetes J This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7 L12 stalk, and near the tRNA binding site of the peptidyltransferase center rplF GO:0002181,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02933 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L6 BECNEDJF_00082 411477.PARMER_03751 4.21e-72 217.0 COG0256@1|root,COG0256@2|Bacteria,4NQAS@976|Bacteroidetes,2FSHX@200643|Bacteroidia,22Y3P@171551|Porphyromonadaceae 976|Bacteroidetes J This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance rplR GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0008097,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - ko:K02881 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L18p BECNEDJF_00083 411477.PARMER_03752 6.86e-113 325.0 COG0098@1|root,COG0098@2|Bacteria,4NG1Z@976|Bacteroidetes,2FMI8@200643|Bacteroidia,22WQ5@171551|Porphyromonadaceae 976|Bacteroidetes J Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body rpsE - - ko:K02988 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S5,Ribosomal_S5_C BECNEDJF_00084 999419.HMPREF1077_02252 5.86e-31 108.0 COG1841@1|root,COG1841@2|Bacteria,4NUXV@976|Bacteroidetes,2FUJQ@200643|Bacteroidia,22YP0@171551|Porphyromonadaceae 976|Bacteroidetes J 50S ribosomal protein L30 rpmD GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02907 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L30 BECNEDJF_00085 411477.PARMER_03754 4.92e-94 275.0 COG0200@1|root,COG0200@2|Bacteria,4NNFQ@976|Bacteroidetes,2FSJF@200643|Bacteroidia,22XPR@171551|Porphyromonadaceae 976|Bacteroidetes J binds to the 23S rRNA rplO GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02876 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27A BECNEDJF_00086 411477.PARMER_03755 1.01e-310 848.0 COG0201@1|root,COG0201@2|Bacteria,4NEPU@976|Bacteroidetes,2FPIT@200643|Bacteroidia,22WS4@171551|Porphyromonadaceae 976|Bacteroidetes U The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently secY - - ko:K03076 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5 - - SecY BECNEDJF_00087 411477.PARMER_03756 4.7e-193 535.0 COG0024@1|root,COG0024@2|Bacteria,4NERQ@976|Bacteroidetes,2FM24@200643|Bacteroidia,22X5Z@171551|Porphyromonadaceae 976|Bacteroidetes E Methionine aminopeptidase map - 3.4.11.18 ko:K01265 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 BECNEDJF_00088 411477.PARMER_03757 2.82e-44 143.0 COG0361@1|root,COG0361@2|Bacteria,4NS6S@976|Bacteroidetes,2FTSU@200643|Bacteroidia,22YEU@171551|Porphyromonadaceae 976|Bacteroidetes J One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre- initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initation complex infA GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0043021,GO:0043022,GO:0044424,GO:0044444,GO:0044464,GO:0044877 - ko:K02518 - - - - ko00000,ko03012 - - - eIF-1a BECNEDJF_00089 1235803.C825_01054 3.05e-18 75.5 COG0257@1|root,COG0257@2|Bacteria,4NXGE@976|Bacteroidetes,2FVEE@200643|Bacteroidia,22YYG@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL36 family rpmJ - - ko:K02919 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L36 BECNEDJF_00090 411477.PARMER_03758 5.07e-81 240.0 COG0099@1|root,COG0099@2|Bacteria,4NNGZ@976|Bacteroidetes,2FRYC@200643|Bacteroidia,22Y12@171551|Porphyromonadaceae 976|Bacteroidetes J Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits rpsM GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022613,GO:0032991,GO:0034641,GO:0034645,GO:0042254,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:0071840,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02952 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S13 BECNEDJF_00091 1122931.AUAE01000024_gene3739 1.01e-86 255.0 COG0100@1|root,COG0100@2|Bacteria,4NNHA@976|Bacteroidetes,2FRZD@200643|Bacteroidia,22XN9@171551|Porphyromonadaceae 976|Bacteroidetes J Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome rpsK GO:0000028,GO:0000462,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0016070,GO:0016072,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0030490,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0048027,GO:0065003,GO:0070181,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02948 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S11 BECNEDJF_00092 411477.PARMER_03760 3.59e-140 396.0 COG0522@1|root,COG0522@2|Bacteria,4NEMZ@976|Bacteroidetes,2FMRC@200643|Bacteroidia,22WPW@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit rpsD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006417,GO:0006450,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010608,GO:0010628,GO:0015935,GO:0019222,GO:0019843,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0032268,GO:0032270,GO:0032991,GO:0034248,GO:0034250,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0045727,GO:0045903,GO:0048518,GO:0048522,GO:0050789,GO:0050794,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0060255,GO:0065007,GO:0065008,GO:0080090,GO:0097159,GO:1901363,GO:1990904,GO:2000112 - ko:K02986 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S4,S4 BECNEDJF_00094 411477.PARMER_04036 1.33e-176 493.0 2CC7R@1|root,334IS@2|Bacteria,4NX6W@976|Bacteroidetes,2FVDG@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4469) with IG-like fold - - - - - - - - - - - - DUF4469,HU-DNA_bdg BECNEDJF_00095 411477.PARMER_04034 2.94e-282 771.0 COG2207@1|root,COG2207@2|Bacteria,4NWJN@976|Bacteroidetes,2FV23@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 BECNEDJF_00096 411477.PARMER_04032 0.0 1876.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NEIE@976|Bacteroidetes,2FMGF@200643|Bacteroidia,22X3J@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3,Plug,TonB_dep_Rec BECNEDJF_00097 411477.PARMER_04031 0.0 1070.0 COG5492@1|root,COG5492@2|Bacteria,4NH7Q@976|Bacteroidetes,2FN1I@200643|Bacteroidia,22WZ6@171551|Porphyromonadaceae 976|Bacteroidetes N COG NOG06100 non supervised orthologous group - - - - - - - - - - - - TIG BECNEDJF_00098 999419.HMPREF1077_01001 3.47e-35 126.0 COG2849@1|root,COG2849@2|Bacteria,4NUDS@976|Bacteroidetes,2FTTJ@200643|Bacteroidia,22Z1M@171551|Porphyromonadaceae 976|Bacteroidetes S MORN repeat variant - - - - - - - - - - - - MORN_2 BECNEDJF_00099 411477.PARMER_04029 0.0 1237.0 COG1368@1|root,COG1368@2|Bacteria,4NFI9@976|Bacteroidetes,2FN88@200643|Bacteroidia,22X9H@171551|Porphyromonadaceae 976|Bacteroidetes M Sulfatase ltaS2 - - - - - - - - - - - Sulfatase BECNEDJF_00100 411477.PARMER_04028 1.81e-71 229.0 COG0488@1|root,COG0488@2|Bacteria,4NEHU@976|Bacteroidetes,2FMW7@200643|Bacteroidia,22VV9@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter, ATP-binding protein - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn BECNEDJF_00101 411477.PARMER_03227 1.26e-62 204.0 COG1502@1|root,COG1502@2|Bacteria,4NE2W@976|Bacteroidetes,2FMEA@200643|Bacteroidia,22W66@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol cls - - ko:K06131 ko00564,ko01100,map00564,map01100 - R07390 RC00017 ko00000,ko00001,ko01000 - - - PLDc_2,PLDc_N BECNEDJF_00102 411477.PARMER_03228 1.05e-131 373.0 COG0742@1|root,COG0742@2|Bacteria,4NM7J@976|Bacteroidetes,2FSR0@200643|Bacteroidia,22XZ4@171551|Porphyromonadaceae 976|Bacteroidetes L RNA methyltransferase, RsmD family rsmD - 2.1.1.171 ko:K08316 - - R07234 RC00003 ko00000,ko01000,ko03009 - - - Cons_hypoth95 BECNEDJF_00103 411477.PARMER_03229 5.06e-195 541.0 2DMVR@1|root,32TZG@2|Bacteria,4NSV8@976|Bacteroidetes,2G3AR@200643|Bacteroidia,23213@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3822) - - - - - - - - - - - - DUF3822 BECNEDJF_00104 411477.PARMER_03298 7.7e-75 224.0 2AEY5@1|root,314W0@2|Bacteria,4PJ4F@976|Bacteroidetes,2G1TP@200643|Bacteroidia,231AW@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00105 411477.PARMER_03297 5.38e-125 356.0 COG1595@1|root,COG1595@2|Bacteria,4NSVA@976|Bacteroidetes,2FMT6@200643|Bacteroidia,22Y4K@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00106 411477.PARMER_03296 1.64e-89 263.0 2EFPT@1|root,339FT@2|Bacteria,4NWQF@976|Bacteroidetes,2FT7Q@200643|Bacteroidia,22YKQ@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 9.46 - - - - - - - - - - - - - BECNEDJF_00107 411477.PARMER_03295 3.8e-258 709.0 COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,2FMYA@200643|Bacteroidia,22X1K@171551|Porphyromonadaceae 976|Bacteroidetes S 2-nitropropane dioxygenase - - 1.3.1.9 ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000,ko01004 - - - NMO BECNEDJF_00109 411477.PARMER_03293 1.01e-188 525.0 COG0226@1|root,COG0226@2|Bacteria,4NJGR@976|Bacteroidetes,2FMW1@200643|Bacteroidia,22X86@171551|Porphyromonadaceae 976|Bacteroidetes P Bacterial extracellular solute-binding protein pstS - - ko:K02040 ko02010,ko02020,ko05152,map02010,map02020,map05152 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - PBP_like_2 BECNEDJF_00110 411477.PARMER_03292 0.0 863.0 COG3746@1|root,COG3746@2|Bacteria,4NIRE@976|Bacteroidetes,2FR58@200643|Bacteroidia,22X03@171551|Porphyromonadaceae 976|Bacteroidetes P phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P BECNEDJF_00111 411477.PARMER_03291 0.0 1327.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b BECNEDJF_00112 411477.PARMER_03289 2.34e-140 396.0 COG3637@1|root,COG3637@2|Bacteria,4NR9K@976|Bacteroidetes,2FU82@200643|Bacteroidia,231DZ@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 BECNEDJF_00113 411477.PARMER_03288 0.0 1744.0 COG0046@1|root,COG0047@1|root,COG0046@2|Bacteria,COG0047@2|Bacteria,4NETY@976|Bacteroidetes,2FM2Z@200643|Bacteroidia,22W21@171551|Porphyromonadaceae 976|Bacteroidetes F Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate purL - 6.3.5.3 ko:K01952 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04463 RC00010,RC01160 ko00000,ko00001,ko00002,ko01000 - - - AIRS_C,GATase_5 BECNEDJF_00114 411477.PARMER_02902 0.0 1561.0 COG0460@1|root,COG0527@1|root,COG0460@2|Bacteria,COG0527@2|Bacteria,4NFGR@976|Bacteroidetes,2FMDB@200643|Bacteroidia,22VVG@171551|Porphyromonadaceae 976|Bacteroidetes E homoserine dehydrogenase thrA - 1.1.1.3,2.7.2.4 ko:K12524 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00017,M00018,M00526,M00527 R00480,R01773,R01775 RC00002,RC00043,RC00087 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,ACT,ACT_7,Homoserine_dh,NAD_binding_3 BECNEDJF_00115 411477.PARMER_02901 3.64e-292 797.0 COG3635@1|root,COG3635@2|Bacteria,4NH0F@976|Bacteroidetes,2FMC7@200643|Bacteroidia,22W6J@171551|Porphyromonadaceae 976|Bacteroidetes G 2,3-bisphosphoglycerate-independent phosphoglycerate mutase - - 5.4.2.12 ko:K15635 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 - - - Metalloenzyme,PhosphMutase BECNEDJF_00116 411477.PARMER_02900 0.0 872.0 COG0498@1|root,COG0498@2|Bacteria,4NEAA@976|Bacteroidetes,2FMPH@200643|Bacteroidia,22VYQ@171551|Porphyromonadaceae 976|Bacteroidetes E Threonine synthase N terminus thrC - 4.2.3.1 ko:K01733 ko00260,ko00750,ko01100,ko01110,ko01120,ko01230,map00260,map00750,map01100,map01110,map01120,map01230 M00018 R01466,R05086 RC00017,RC00526 ko00000,ko00001,ko00002,ko01000 - - - PALP,Thr_synth_N BECNEDJF_00117 411477.PARMER_02899 2.47e-275 751.0 2DB9J@1|root,2Z7X1@2|Bacteria,4NGUY@976|Bacteroidetes,2FQG2@200643|Bacteroidia,22XBK@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5109) - - - - - - - - - - - - DUF4434,DUF5109 BECNEDJF_00118 411477.PARMER_02898 4.43e-100 290.0 2BZ8H@1|root,32R4H@2|Bacteria,4NRUQ@976|Bacteroidetes,2FTBX@200643|Bacteroidia,22Y57@171551|Porphyromonadaceae 976|Bacteroidetes S Family of unknown function (DUF695) - - - - - - - - - - - - DUF695 BECNEDJF_00119 411477.PARMER_02897 8.23e-117 334.0 COG1247@1|root,COG1247@2|Bacteria,4NPIE@976|Bacteroidetes,2FSNY@200643|Bacteroidia,22Y03@171551|Porphyromonadaceae 976|Bacteroidetes M Acetyltransferase (GNAT) domain yncA - 2.3.1.183 ko:K03823 ko00440,ko01130,map00440,map01130 - R08871,R08938 RC00004,RC00064 ko00000,ko00001,ko01000 - - - Acetyltransf_4 BECNEDJF_00120 411477.PARMER_02894 1.09e-221 612.0 COG0385@1|root,COG0385@2|Bacteria,4NFWK@976|Bacteroidetes,2FM0C@200643|Bacteroidia,22XY0@171551|Porphyromonadaceae 976|Bacteroidetes S Sodium bile acid symporter family - - - ko:K03453 - - - - ko00000 2.A.28 - - SBF BECNEDJF_00121 999419.HMPREF1077_01265 1.31e-109 323.0 COG0404@1|root,COG0404@2|Bacteria,4NF7S@976|Bacteroidetes,2FPDM@200643|Bacteroidia,22X2U@171551|Porphyromonadaceae 976|Bacteroidetes E The glycine cleavage system catalyzes the degradation of glycine gcvT - 2.1.2.10 ko:K00605 ko00260,ko00630,ko00670,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map00670,map01100,map01110,map01130,map01200 M00532 R01221,R02300,R04125 RC00022,RC00069,RC00183,RC02834 ko00000,ko00001,ko00002,ko01000 - - - GCV_T,GCV_T_C BECNEDJF_00122 411477.PARMER_03316 7.36e-173 483.0 COG1192@1|root,COG1192@2|Bacteria,4NFEX@976|Bacteroidetes,2FMX2@200643|Bacteroidia,22W77@171551|Porphyromonadaceae 976|Bacteroidetes D Chromosome partitioning protein ParA soj - - ko:K03496 - - - - ko00000,ko03036,ko04812 - - - AAA_31 BECNEDJF_00123 411477.PARMER_03317 1.33e-67 204.0 COG1569@1|root,COG1569@2|Bacteria,4NSFI@976|Bacteroidetes,2FV4N@200643|Bacteroidia 976|Bacteroidetes S PIN domain - - - - - - - - - - - - PIN_3 BECNEDJF_00124 411477.PARMER_02986 6.62e-261 721.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FM4G@200643|Bacteroidia,22WJA@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxyl transferase domain - - - - - - - - - - - - Carboxyl_trans BECNEDJF_00125 411477.PARMER_02985 2.42e-208 576.0 COG3630@1|root,COG3630@2|Bacteria,4NIHN@976|Bacteroidetes,2FMSV@200643|Bacteroidia,22W1S@171551|Porphyromonadaceae 976|Bacteroidetes C Oxaloacetate decarboxylase, gamma chain - - - - - - - - - - - - LTD,OAD_gamma BECNEDJF_00126 411477.PARMER_02984 1.61e-92 271.0 COG4770@1|root,COG4770@2|Bacteria,4NSWV@976|Bacteroidetes,2FRYI@200643|Bacteroidia,22YBV@171551|Porphyromonadaceae 976|Bacteroidetes I Biofilm PGA synthesis protein PgaD mmdC - - - - - - - - - - - Biotin_lipoyl BECNEDJF_00127 411477.PARMER_02983 2.7e-277 759.0 COG1883@1|root,COG1883@2|Bacteria,4NH3V@976|Bacteroidetes,2FMSY@200643|Bacteroidia,22WID@171551|Porphyromonadaceae 976|Bacteroidetes C Glutaconyl-CoA decarboxylase subunit beta oadB - 4.1.1.3 ko:K01572 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_beta BECNEDJF_00128 411477.PARMER_02981 0.0 1367.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FNU1@200643|Bacteroidia,2300D@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG26639 non supervised orthologous group - - - - - - - - - - - - DUF3874,VirE,VirE_N BECNEDJF_00129 411477.PARMER_02980 1.44e-90 265.0 COG0776@1|root,COG0776@2|Bacteria,4NVZW@976|Bacteroidetes,2FSFM@200643|Bacteroidia 976|Bacteroidetes L COG NOG35286 non supervised orthologous group - - - - - - - - - - - - Bac_DNA_binding BECNEDJF_00130 411477.PARMER_02978 2.56e-152 429.0 COG1214@1|root,COG1214@2|Bacteria,4NDUR@976|Bacteroidetes,2FPYK@200643|Bacteroidia,22WRV@171551|Porphyromonadaceae 976|Bacteroidetes O Universal bacterial protein YeaZ yeaZ - - ko:K14742 - - - - ko00000,ko03016 - - - Peptidase_M22 BECNEDJF_00131 411477.PARMER_02976 3.69e-183 512.0 COG1561@1|root,COG1561@2|Bacteria,4NEU4@976|Bacteroidetes,2FPBF@200643|Bacteroidia,22WDC@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF1732) - - - - - - - - - - - - DUF1732,YicC_N BECNEDJF_00132 411477.PARMER_02975 3.92e-129 367.0 COG0194@1|root,COG0194@2|Bacteria,4NEDG@976|Bacteroidetes,2FNWA@200643|Bacteroidia,22XMY@171551|Porphyromonadaceae 976|Bacteroidetes F Essential for recycling GMP and indirectly, cGMP gmk GO:0003674,GO:0003824,GO:0004385,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009126,GO:0009132,GO:0009135,GO:0009150,GO:0009161,GO:0009165,GO:0009167,GO:0009179,GO:0009185,GO:0009259,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0042278,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046037,GO:0046128,GO:0046483,GO:0046710,GO:0046940,GO:0050145,GO:0055086,GO:0071704,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901576,GO:1901657 2.7.4.8 ko:K00942 ko00230,ko01100,map00230,map01100 M00050 R00332,R02090 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Guanylate_kin BECNEDJF_00134 411477.PARMER_02973 8.86e-151 423.0 COG1057@1|root,COG1057@2|Bacteria,4NFQI@976|Bacteroidetes,2FTAA@200643|Bacteroidia,22XY3@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) nadD - 2.7.7.18 ko:K00969 ko00760,ko01100,map00760,map01100 M00115 R00137,R03005 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like BECNEDJF_00135 411477.PARMER_02316 2.7e-163 457.0 COG1051@1|root,COG1051@2|Bacteria,4NE29@976|Bacteroidetes,2G31G@200643|Bacteroidia,22X8R@171551|Porphyromonadaceae 976|Bacteroidetes F NUDIX domain - - - - - - - - - - - - NUDIX BECNEDJF_00136 411477.PARMER_02317 5.13e-151 431.0 COG0153@1|root,COG0153@2|Bacteria,4NE0C@976|Bacteroidetes,2FNGC@200643|Bacteroidia,22WKE@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the GHMP kinase family. GalK subfamily galK - 2.7.1.6 ko:K00849 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00554,M00632 R01092 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000,ko04147 - - - GHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg BECNEDJF_00137 411477.PARMER_00222 2.81e-259 736.0 2EXZP@1|root,33R8R@2|Bacteria,4P0UW@976|Bacteroidetes,2FWYR@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00138 411477.PARMER_00221 2.39e-121 347.0 COG1595@1|root,COG1595@2|Bacteria,4NPZ8@976|Bacteroidetes,2FS6X@200643|Bacteroidia,2308S@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00139 411477.PARMER_00220 4.84e-230 634.0 COG3712@1|root,COG3712@2|Bacteria,4P00S@976|Bacteroidetes,2FRD5@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_00140 411477.PARMER_00219 0.0 2268.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22WSE@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00141 999419.HMPREF1077_01732 0.0 1009.0 COG3637@1|root,COG3637@2|Bacteria,4NIPZ@976|Bacteroidetes,2FQ2F@200643|Bacteroidia,22XD1@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00142 411477.PARMER_00217 5.46e-305 829.0 COG2273@1|root,COG2273@2|Bacteria,4P6MD@976|Bacteroidetes,2FYN8@200643|Bacteroidia,230RQ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 16 - - - - - - - - - - - - Big_4,Glyco_hydro_16 BECNEDJF_00143 411477.PARMER_00216 2.22e-196 555.0 2DBEW@1|root,2Z8UY@2|Bacteria,4NH98@976|Bacteroidetes,2FPNP@200643|Bacteroidia,22YKH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4832) - - - - - - - - - - - - DUF4832,DUF4874 BECNEDJF_00144 411477.PARMER_02507 0.0 1547.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22W30@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_00145 411477.PARMER_02506 2.55e-212 586.0 COG0805@1|root,COG0805@2|Bacteria,4NEKM@976|Bacteroidetes,2FNUF@200643|Bacteroidia,22WUU@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes tatC - - ko:K03118 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - TatC BECNEDJF_00146 411477.PARMER_02504 1.64e-35 120.0 COG1826@1|root,COG1826@2|Bacteria,4NUNH@976|Bacteroidetes,2FUQY@200643|Bacteroidia,22YQS@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system tatA - - ko:K03116 ko03060,ko03070,map03060,map03070 M00336 - - ko00000,ko00001,ko00002,ko02044 2.A.64 - - MttA_Hcf106 BECNEDJF_00147 411477.PARMER_02503 2.16e-205 568.0 COG0331@1|root,COG0331@2|Bacteria,4NE1D@976|Bacteroidetes,2FM9P@200643|Bacteroidia,22W12@171551|Porphyromonadaceae 976|Bacteroidetes I malonyl CoA-acyl carrier protein transacylase fabD - 2.3.1.39 ko:K00645 ko00061,ko00333,ko01100,ko01130,ko01212,map00061,map00333,map01100,map01130,map01212 M00082 R01626,R11671 RC00004,RC00039,RC02727 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyl_transf_1 BECNEDJF_00148 999419.HMPREF1077_02583 0.0 1289.0 2DBCI@1|root,2Z8DZ@2|Bacteria,4NF4Y@976|Bacteroidetes,2FQEW@200643|Bacteroidia,22WNQ@171551|Porphyromonadaceae 976|Bacteroidetes S Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like BECNEDJF_00149 411477.PARMER_02500 0.0 2093.0 COG4206@1|root,COG4206@2|Bacteria,4NZWU@976|Bacteroidetes,2G065@200643|Bacteroidia,22WB2@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00150 1122931.AUAE01000014_gene1963 2.52e-23 101.0 COG0457@1|root,COG0457@2|Bacteria,4NG3F@976|Bacteroidetes,2FM0I@200643|Bacteroidia,22XFW@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00151 411477.PARMER_00928 0.0 2736.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22W8R@171551|Porphyromonadaceae 976|Bacteroidetes G beta-galactosidase - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,F5_F8_type_C,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_00152 411477.PARMER_00929 1.29e-153 434.0 COG1521@1|root,COG1521@2|Bacteria,4NE9E@976|Bacteroidetes,2FMPK@200643|Bacteroidia,22XYI@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis coaX - 2.7.1.33 ko:K03525 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Pan_kinase BECNEDJF_00153 411477.PARMER_00930 2.71e-307 837.0 COG2067@1|root,COG2067@2|Bacteria,4NEP1@976|Bacteroidetes,2FN33@200643|Bacteroidia,22W7P@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location OuterMembrane, score - - - - - - - - - - - - Toluene_X BECNEDJF_00154 411477.PARMER_00931 0.0 912.0 COG0457@1|root,COG0457@2|Bacteria,4NF7U@976|Bacteroidetes,2FP0S@200643|Bacteroidia,22XHG@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_8 BECNEDJF_00155 411477.PARMER_00932 2.68e-171 478.0 COG3117@1|root,COG3117@2|Bacteria,4NRIN@976|Bacteroidetes,2FP9Z@200643|Bacteroidia,22Y9S@171551|Porphyromonadaceae 976|Bacteroidetes S Lipopolysaccharide-assembly, LptC-related - - - - - - - - - - - - LptC BECNEDJF_00156 411477.PARMER_00933 2.94e-282 773.0 COG1253@1|root,COG1253@2|Bacteria,4NG0I@976|Bacteroidetes,2FMR1@200643|Bacteroidia,22X0Y@171551|Porphyromonadaceae 976|Bacteroidetes S Hemolysin tlyC - - ko:K03699 - - - - ko00000,ko02042 - - - CBS,CorC_HlyC,DUF21 BECNEDJF_00157 411479.BACUNI_03904 3.3e-109 329.0 COG0457@1|root,COG2197@1|root,COG0457@2|Bacteria,COG2197@2|Bacteria,4NGS0@976|Bacteroidetes,2FPZY@200643|Bacteroidia,4ANEJ@815|Bacteroidaceae 976|Bacteroidetes KT tetratricopeptide repeat - - - - - - - - - - - - TPR_12,TPR_8 BECNEDJF_00158 411477.PARMER_01392 0.0 3354.0 COG2373@1|root,COG2373@2|Bacteria,4NED2@976|Bacteroidetes,2FNFE@200643|Bacteroidia,22WEK@171551|Porphyromonadaceae 976|Bacteroidetes S Alpha-2-macroglobulin family - - - - - - - - - - - - A2M,A2M_N,A2M_N_2,CarbopepD_reg_2,Plug BECNEDJF_00160 411477.PARMER_01393 1.03e-84 249.0 2CG1Y@1|root,31NHZ@2|Bacteria,4NQ9Z@976|Bacteroidetes,2FSBR@200643|Bacteroidia,22YJ9@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 BECNEDJF_00161 411477.PARMER_01394 5.12e-266 728.0 2CG1Y@1|root,2Z9QX@2|Bacteria,4NJI6@976|Bacteroidetes,2FPRX@200643|Bacteroidia,22XW6@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 BECNEDJF_00162 411477.PARMER_01395 3.18e-262 718.0 COG1703@1|root,COG1703@2|Bacteria,4NE7Y@976|Bacteroidetes,2FNHU@200643|Bacteroidia,22XBJ@171551|Porphyromonadaceae 976|Bacteroidetes E LAO AO transport system ATPase argK - - ko:K07588 - - - - ko00000,ko01000 - - - ArgK BECNEDJF_00163 411477.PARMER_01396 0.0 1603.0 COG1409@1|root,COG1520@1|root,COG1409@2|Bacteria,COG1520@2|Bacteria,4NFA9@976|Bacteroidetes,2FPAX@200643|Bacteroidia,22X7X@171551|Porphyromonadaceae 976|Bacteroidetes S PQQ enzyme repeat - - - - - - - - - - - - Metallophos,PQQ,PQQ_2,PQQ_3 BECNEDJF_00164 411477.PARMER_01939 5.28e-224 622.0 2C62B@1|root,33R47@2|Bacteria,4P1U4@976|Bacteroidetes,2FQ3F@200643|Bacteroidia,22YZW@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG33609 non supervised orthologous group - - - - - - - - - - - - CarboxypepD_reg BECNEDJF_00165 411477.PARMER_00860 2.56e-78 241.0 COG1702@1|root,COG1702@2|Bacteria,4NDYV@976|Bacteroidetes,2FMIF@200643|Bacteroidia,22W7X@171551|Porphyromonadaceae 976|Bacteroidetes T Phosphate starvation protein PhoH phoH - - ko:K06217 - - - - ko00000 - - - PhoH BECNEDJF_00166 411477.PARMER_00859 1.02e-230 634.0 COG0152@1|root,COG0152@2|Bacteria,4NF1Z@976|Bacteroidetes,2FPKZ@200643|Bacteroidia,22WD6@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis purC GO:0003674,GO:0003824,GO:0004639,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006188,GO:0006189,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.2.6 ko:K01923 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04591 RC00064,RC00162 ko00000,ko00001,ko00002,ko01000 - - - SAICAR_synt BECNEDJF_00167 411477.PARMER_00858 2.31e-181 504.0 COG0500@1|root,COG2226@2|Bacteria,4NEDR@976|Bacteroidetes,2FMI3@200643|Bacteroidia,22XH4@171551|Porphyromonadaceae 976|Bacteroidetes H Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) menG - 2.1.1.163,2.1.1.201 ko:K03183 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116,M00117 R04990,R04993,R06859,R08774,R09736 RC00003,RC01253,RC01662 ko00000,ko00001,ko00002,ko01000 - - - Ubie_methyltran BECNEDJF_00168 411477.PARMER_00857 2.23e-179 499.0 COG0169@1|root,COG0169@2|Bacteria,4NEBJ@976|Bacteroidetes,2FP6C@200643|Bacteroidia,22WMN@171551|Porphyromonadaceae 976|Bacteroidetes E Shikimate aroE - 1.1.1.25 ko:K00014 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02413 RC00206 ko00000,ko00001,ko00002,ko01000 - - - Shikimate_dh_N BECNEDJF_00169 411477.PARMER_00856 3.7e-143 404.0 COG2091@1|root,COG2091@2|Bacteria,4NSBI@976|Bacteroidetes,2FN3N@200643|Bacteroidia,22YHK@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the P-Pant transferase superfamily sfp - - - - - - - - - - - ACPS BECNEDJF_00170 411477.PARMER_00855 4.79e-140 395.0 293VW@1|root,2ZRB2@2|Bacteria,4NMK7@976|Bacteroidetes,2FUEE@200643|Bacteroidia,22YE1@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated lipoprotein GldD gldD - - - - - - - - - - - - BECNEDJF_00171 411477.PARMER_00854 7.3e-304 830.0 COG1253@1|root,COG1253@2|Bacteria,4NDZ7@976|Bacteroidetes,2FMEZ@200643|Bacteroidia,22WK3@171551|Porphyromonadaceae 976|Bacteroidetes S gliding motility-associated protein GldE gldE - - - - - - - - - - - CBS,CorC_HlyC,DUF21 BECNEDJF_00172 411477.PARMER_00853 9.92e-110 316.0 COG0629@1|root,COG0629@2|Bacteria,4NQBK@976|Bacteroidetes,2FT5G@200643|Bacteroidia,22Y9U@171551|Porphyromonadaceae 976|Bacteroidetes L Single-stranded DNA-binding protein ssb - - ko:K03111 ko03030,ko03430,ko03440,map03030,map03430,map03440 - - - ko00000,ko00001,ko03029,ko03032,ko03400 - - - SSB BECNEDJF_00173 411477.PARMER_00852 1.71e-306 834.0 COG1194@1|root,COG1194@2|Bacteria,4NDZY@976|Bacteroidetes,2FNMQ@200643|Bacteroidia,22WUP@171551|Porphyromonadaceae 976|Bacteroidetes L A G-specific adenine glycosylase mutY - - ko:K03575 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD,NUDIX_4 BECNEDJF_00174 1235803.C825_00691 8.94e-56 174.0 COG0776@1|root,COG0776@2|Bacteria,4NT0D@976|Bacteroidetes,2FTUV@200643|Bacteroidia,22YCW@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the bacterial histone-like protein family hupA - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding BECNEDJF_00175 411477.PARMER_00850 0.0 1015.0 COG1530@1|root,COG1530@2|Bacteria,4NED1@976|Bacteroidetes,2FMXV@200643|Bacteroidia,22WM6@171551|Porphyromonadaceae 976|Bacteroidetes J ribonuclease G rng - - ko:K08301 - - - - ko00000,ko01000,ko03009,ko03019 - - - RNase_E_G,S1 BECNEDJF_00177 236814.IX39_20380 3.51e-124 369.0 COG1431@1|root,COG1431@2|Bacteria,4NH01@976|Bacteroidetes,1HXIT@117743|Flavobacteriia,3ZU2E@59732|Chryseobacterium 976|Bacteroidetes J Piwi - - - - - - - - - - - - SIR2_2 BECNEDJF_00179 411477.PARMER_04332 4.64e-61 189.0 COG2204@1|root,COG2204@2|Bacteria 2|Bacteria T phosphorelay signal transduction system - - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - HATPase_c_2,HTH_8,Response_reg,Sigma54_activ_2 BECNEDJF_00180 411477.PARMER_01717 7.82e-80 237.0 COG5496@1|root,COG5496@2|Bacteria,4NR7G@976|Bacteroidetes,2FUCR@200643|Bacteroidia 976|Bacteroidetes S Thioesterase family - - - - - - - - - - - - 4HBT BECNEDJF_00181 999419.HMPREF1077_00069 0.0 1568.0 COG4206@1|root,COG4206@2|Bacteria,4NE1W@976|Bacteroidetes,2FME0@200643|Bacteroidia,22XAS@171551|Porphyromonadaceae 976|Bacteroidetes H TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,Plug,TonB_dep_Rec BECNEDJF_00182 411477.PARMER_01716 0.0 994.0 COG5492@1|root,COG5492@2|Bacteria,4NJ44@976|Bacteroidetes,2G0H1@200643|Bacteroidia,2323Z@171551|Porphyromonadaceae 976|Bacteroidetes N Bacterial Ig-like domain 2 - - - - - - - - - - - - Big_2 BECNEDJF_00183 411477.PARMER_01713 8.08e-190 526.0 COG0483@1|root,COG0483@2|Bacteria,4NI6D@976|Bacteroidetes,2FNAK@200643|Bacteroidia,22X9F@171551|Porphyromonadaceae 976|Bacteroidetes G Inositol monophosphatase family suhB - 3.1.3.25 ko:K01092 ko00521,ko00562,ko01100,ko04070,map00521,map00562,map01100,map04070 M00131 R01185,R01186,R01187 RC00078 ko00000,ko00001,ko00002,ko01000 - - - Inositol_P BECNEDJF_00186 411477.PARMER_02944 3.81e-224 617.0 COG2801@1|root,COG2801@2|Bacteria,4NKGS@976|Bacteroidetes,2FRAQ@200643|Bacteroidia,22YVN@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Integrase core domain - - - - - - - - - - - - rve,rve_3 BECNEDJF_00188 1235803.C825_02399 1.85e-26 97.1 COG0230@1|root,COG0230@2|Bacteria,4NUTV@976|Bacteroidetes,2FUJ7@200643|Bacteroidia,23132@171551|Porphyromonadaceae 976|Bacteroidetes J Ribosomal protein L34 rpmH - - ko:K02914 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L34 BECNEDJF_00189 411477.PARMER_01701 2.23e-143 405.0 COG2815@1|root,COG2815@2|Bacteria,4NSUI@976|Bacteroidetes,2FPS4@200643|Bacteroidia,22YEV@171551|Porphyromonadaceae 976|Bacteroidetes S PASTA domain protein pknB - 2.7.11.1,6.3.2.4 ko:K01921,ko:K08884,ko:K12132 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01001,ko01011 - - - PASTA BECNEDJF_00190 411477.PARMER_01702 2.44e-267 731.0 COG0564@1|root,COG0564@2|Bacteria,4NEV3@976|Bacteroidetes,2FMD1@200643|Bacteroidia,22W4T@171551|Porphyromonadaceae 976|Bacteroidetes J Responsible for synthesis of pseudouridine from uracil rluD - 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 BECNEDJF_00191 411477.PARMER_01703 5.27e-236 649.0 COG1181@1|root,COG1181@2|Bacteria,4NE9P@976|Bacteroidetes,2FNMC@200643|Bacteroidia,22WV1@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the D-alanine--D-alanine ligase family ddl - 6.3.2.4 ko:K01921 ko00473,ko00550,ko01100,ko01502,map00473,map00550,map01100,map01502 - R01150 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Dala_Dala_lig_C,Dala_Dala_lig_N BECNEDJF_00192 411477.PARMER_01704 6.88e-278 759.0 COG0204@1|root,COG0204@2|Bacteria,4NGR9@976|Bacteroidetes,2FM79@200643|Bacteroidia,22VV6@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase - - - - - - - - - - - - Acyltransferase BECNEDJF_00193 411477.PARMER_01705 0.0 2408.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,22X4F@171551|Porphyromonadaceae 976|Bacteroidetes T Y_Y_Y domain - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y BECNEDJF_00194 411477.PARMER_01707 2.98e-287 785.0 COG0477@1|root,COG2814@2|Bacteria,4PKJD@976|Bacteroidetes,2G0H0@200643|Bacteroidia,2323Y@171551|Porphyromonadaceae 976|Bacteroidetes EGP MFS_1 like family - - - - - - - - - - - - Nuc_H_symport BECNEDJF_00196 411477.PARMER_03748 2.79e-54 170.0 COG0199@1|root,COG0199@2|Bacteria,4NQ6N@976|Bacteroidetes,2FTD0@200643|Bacteroidia,22Y99@171551|Porphyromonadaceae 976|Bacteroidetes J Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site rpsN GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02954 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S14 BECNEDJF_00197 411477.PARMER_03747 1.48e-122 350.0 COG0094@1|root,COG0094@2|Bacteria,4NEGY@976|Bacteroidetes,2FM5Y@200643|Bacteroidia,22VVF@171551|Porphyromonadaceae 976|Bacteroidetes J This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits rplE GO:0000027,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02931 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L5,Ribosomal_L5_C BECNEDJF_00198 411477.PARMER_03746 1.3e-69 210.0 COG0198@1|root,COG0198@2|Bacteria,4NSTI@976|Bacteroidetes,2FT5V@200643|Bacteroidia,22Y4Z@171551|Porphyromonadaceae 976|Bacteroidetes J One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit rplX GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022625,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02895 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KOW,ribosomal_L24 BECNEDJF_00199 1122931.AUAE01000024_gene3726 1.13e-77 231.0 COG0093@1|root,COG0093@2|Bacteria,4NNM6@976|Bacteroidetes,2FSG8@200643|Bacteroidia,22XX5@171551|Porphyromonadaceae 976|Bacteroidetes J Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome rplN GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0070180,GO:0097159,GO:1901363,GO:1990904 - ko:K02874 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L14 BECNEDJF_00201 411477.PARMER_02371 4.85e-120 355.0 COG0442@1|root,COG0442@2|Bacteria,4NEAF@976|Bacteroidetes,2FMZT@200643|Bacteroidia,22X3K@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of proline to tRNA(Pro) in a two-step reaction proline is first activated by ATP to form Pro- AMP and then transferred to the acceptor end of tRNA(Pro) proS GO:0003674,GO:0003824,GO:0004812,GO:0004827,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006433,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0017101,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.15 ko:K01881 ko00970,map00970 M00359,M00360 R03661 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,ProRS-C_1,tRNA-synt_2b BECNEDJF_00202 411477.PARMER_01538 0.0 1004.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,22X0F@171551|Porphyromonadaceae 976|Bacteroidetes H CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00203 411477.PARMER_01537 0.0 1370.0 COG0614@1|root,COG0614@2|Bacteria,4NEF0@976|Bacteroidetes,2FNDC@200643|Bacteroidia,2303Y@171551|Porphyromonadaceae 976|Bacteroidetes P Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00204 999419.HMPREF1077_00260 7.57e-288 790.0 COG3511@1|root,COG3511@2|Bacteria,4NXFA@976|Bacteroidetes,2FXPI@200643|Bacteroidia,22YX1@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function (DUF1735) - - - - - - - - - - - - DUF1735,F5_F8_type_C BECNEDJF_00206 999419.HMPREF1077_00271 1.72e-47 164.0 COG0642@1|root,COG2205@2|Bacteria,4P2V5@976|Bacteroidetes,2FNK3@200643|Bacteroidia,230JT@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c BECNEDJF_00208 1235813.JCM10003_3936 2.18e-27 111.0 COG4974@1|root,COG4974@2|Bacteria,4NEK2@976|Bacteroidetes,2FMJC@200643|Bacteroidia,4AM5T@815|Bacteroidaceae 976|Bacteroidetes L Transposase C of IS166 homeodomain - - - - - - - - - - - - DDE_Tnp_IS66,DDE_Tnp_IS66_C,LZ_Tnp_IS66 BECNEDJF_00209 1235803.C825_00855 0.0 1793.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,22XHT@171551|Porphyromonadaceae 976|Bacteroidetes H Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00210 1235803.C825_00854 0.0 1116.0 COG1435@1|root,COG1435@2|Bacteria,4NE0A@976|Bacteroidetes,2FN05@200643|Bacteroidia,231TF@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00211 1235803.C825_00853 0.0 1791.0 COG4206@1|root,COG4206@2|Bacteria 2|Bacteria H cobalamin-transporting ATPase activity - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00212 1235803.C825_00852 0.0 1113.0 COG1435@1|root,COG1435@2|Bacteria,4NGMB@976|Bacteroidetes,2FNGX@200643|Bacteroidia,231TK@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_00213 1235803.C825_00850 8.85e-61 198.0 28I6K@1|root,2Z89I@2|Bacteria,4NDVP@976|Bacteroidetes,2FRW2@200643|Bacteroidia,23143@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00214 1235803.C825_00849 0.0 1336.0 COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FW74@200643|Bacteroidia,22Z9H@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - - - - - - - - - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N BECNEDJF_00215 1235803.C825_00848 0.0 1179.0 2DBGI@1|root,2Z94U@2|Bacteria,4NI4P@976|Bacteroidetes,2FWTC@200643|Bacteroidia,22ZM8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00216 1211813.CAPH01000018_gene946 0.0 955.0 2DBGI@1|root,2Z94U@2|Bacteria,4NI4P@976|Bacteroidetes,2FWRI@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00217 999419.HMPREF1077_00285 1.17e-88 266.0 COG0745@1|root,COG0745@2|Bacteria,4NTDZ@976|Bacteroidetes,2FS9E@200643|Bacteroidia 976|Bacteroidetes T Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Response_reg,Trans_reg_C BECNEDJF_00218 411477.PARMER_01532 8.49e-210 580.0 COG0673@1|root,COG0673@2|Bacteria,4NGP9@976|Bacteroidetes,2FMTZ@200643|Bacteroidia,22WG9@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate ddh - 1.4.1.16 ko:K03340 ko00300,ko01100,ko01110,ko01230,map00300,map01100,map01110,map01230 M00526 R02755 RC00006 ko00000,ko00001,ko00002,ko01000 - - - CoA_binding,DAPDH_C,GFO_IDH_MocA,Semialdhyde_dh BECNEDJF_00219 411477.PARMER_01531 2.1e-213 587.0 COG0682@1|root,COG0682@2|Bacteria,4NFP7@976|Bacteroidetes,2FMXU@200643|Bacteroidia,22WIT@171551|Porphyromonadaceae 976|Bacteroidetes M Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins lgt - - - - - - - - - - - LGT BECNEDJF_00220 411477.PARMER_01530 1.96e-295 805.0 COG0426@1|root,COG0426@2|Bacteria,4NGI2@976|Bacteroidetes,2FMWU@200643|Bacteroidia,22W6S@171551|Porphyromonadaceae 976|Bacteroidetes C Metallo-beta-lactamase domain protein fprA - 1.6.3.4 ko:K22405 - - - - ko00000,ko01000 - - - Flavodoxin_1,Flavodoxin_5,Lactamase_B,Lactamase_B_2 BECNEDJF_00221 411477.PARMER_01529 1.7e-195 541.0 COG0363@1|root,COG0363@2|Bacteria,4NHF8@976|Bacteroidetes,2FN1D@200643|Bacteroidia,22W1C@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion nagB GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0044424,GO:0044444,GO:0044464 3.5.99.6 ko:K02564 ko00520,ko01100,map00520,map01100 - R00765 RC00163 ko00000,ko00001,ko01000 - - - Glucosamine_iso BECNEDJF_00222 411477.PARMER_01528 1.45e-55 173.0 COG1729@1|root,COG1729@2|Bacteria,4NYBX@976|Bacteroidetes,2G0GX@200643|Bacteroidia,231ES@171551|Porphyromonadaceae 976|Bacteroidetes S TPR repeat - - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2 BECNEDJF_00223 411477.PARMER_01526 0.0 1502.0 COG0550@1|root,COG0550@2|Bacteria,4NF9S@976|Bacteroidetes,2FMSF@200643|Bacteroidia,22WGN@171551|Porphyromonadaceae 976|Bacteroidetes L Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone topA - 5.99.1.2 ko:K03168 - - - - ko00000,ko01000,ko03032,ko03400 - - - Topoisom_bac,Toprim,Toprim_C_rpt BECNEDJF_00225 531844.FIC_01396 7.17e-50 171.0 COG0500@1|root,COG2226@2|Bacteria,4NE6P@976|Bacteroidetes,1HXEZ@117743|Flavobacteriia,40608@61432|unclassified Flavobacteriaceae 976|Bacteroidetes Q ubiE/COQ5 methyltransferase family - - - - - - - - - - - - Methyltransf_11 BECNEDJF_00226 411477.PARMER_01523 0.0 1172.0 COG0018@1|root,COG0018@2|Bacteria,4NE7Q@976|Bacteroidetes,2FN06@200643|Bacteroidia,22VUX@171551|Porphyromonadaceae 976|Bacteroidetes J Arginyl-tRNA synthetase argS - 6.1.1.19 ko:K01887 ko00970,map00970 M00359,M00360 R03646 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Arg_tRNA_synt_N,DALR_1,tRNA-synt_1d BECNEDJF_00227 411477.PARMER_01522 1.01e-52 166.0 COG0776@1|root,COG0776@2|Bacteria,4NSK6@976|Bacteroidetes,2FTWW@200643|Bacteroidia,22YD0@171551|Porphyromonadaceae 976|Bacteroidetes L Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions hupB - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding BECNEDJF_00228 411477.PARMER_01521 6.88e-169 471.0 COG0705@1|root,COG0705@2|Bacteria,4NIYR@976|Bacteroidetes,2FNMJ@200643|Bacteroidia,22Y0S@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - 3.4.21.105 ko:K09650 - - - - ko00000,ko01000,ko01002,ko03029 - - - Rhomboid BECNEDJF_00229 411477.PARMER_01520 1.02e-198 551.0 COG0705@1|root,COG0705@2|Bacteria,4NGVJ@976|Bacteroidetes,2FMGW@200643|Bacteroidia,22WSS@171551|Porphyromonadaceae 976|Bacteroidetes S Rhomboid family - - - - - - - - - - - - Rhomboid BECNEDJF_00230 411477.PARMER_01519 2.47e-274 749.0 COG3568@1|root,COG3568@2|Bacteria,4NGUV@976|Bacteroidetes,2FNIX@200643|Bacteroidia,22WTP@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease Exonuclease phosphatase family protein - - - - - - - - - - - - Exo_endo_phos BECNEDJF_00231 999419.HMPREF1077_00299 3e-119 342.0 2E80C@1|root,332EN@2|Bacteria,4NX72@976|Bacteroidetes,2FUR6@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4468) with TBP-like fold - - - - - - - - - - - - DUF4468 BECNEDJF_00232 411477.PARMER_01517 1.09e-225 623.0 2EAXQ@1|root,334YS@2|Bacteria,4NI39@976|Bacteroidetes,2FNTF@200643|Bacteroidia,22XQP@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4468) with TBP-like fold - - - ko:K03646 - - - - ko00000,ko02000 2.C.1.2 - - DUF4468 BECNEDJF_00233 411477.PARMER_01516 0.0 1871.0 COG0341@1|root,COG0342@1|root,COG0341@2|Bacteria,COG0342@2|Bacteria,4NE1X@976|Bacteroidetes,2FMPX@200643|Bacteroidia,22WE8@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA secD - - ko:K03072,ko:K12257 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 2.A.6.4,3.A.5.2,3.A.5.7 - - SecD_SecF,Sec_GG BECNEDJF_00234 411477.PARMER_01515 0.0 1335.0 COG2987@1|root,COG2987@2|Bacteria,4NF2P@976|Bacteroidetes,2FNQK@200643|Bacteroidia,22X3D@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate hutU - 4.2.1.49 ko:K01712 ko00340,ko01100,map00340,map01100 M00045 R02914 RC00804 ko00000,ko00001,ko00002,ko01000 - - - Urocanase,Urocanase_C,Urocanase_N BECNEDJF_00235 742817.HMPREF9449_00505 1.07e-124 356.0 2EYUQ@1|root,33S1W@2|Bacteria,4P01W@976|Bacteroidetes,2FM25@200643|Bacteroidia,22Z8Z@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00236 449673.BACSTE_03783 3.31e-179 503.0 28HIT@1|root,2Z7U6@2|Bacteria,4NEWV@976|Bacteroidetes,2FQJ5@200643|Bacteroidia,4AKUG@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00237 742767.HMPREF9456_00207 2.6e-21 83.6 2EG32@1|root,339V1@2|Bacteria,4NXHK@976|Bacteroidetes,2FZR2@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00239 1291050.JAGE01000001_gene1177 7.78e-72 221.0 2CIQB@1|root,30R27@2|Bacteria,1V4BR@1239|Firmicutes,24WBR@186801|Clostridia 186801|Clostridia S MTH538 TIR-like domain (DUF1863) - - - - - - - - - - - - DUF1863 BECNEDJF_00240 649747.HMPREF0083_00075 1.75e-88 264.0 28KKC@1|root,2ZA57@2|Bacteria,1V9NK@1239|Firmicutes,4HT6G@91061|Bacilli 91061|Bacilli S MTH538 TIR-like domain (DUF1863) - - - - - - - - - - - - DUF1863 BECNEDJF_00241 1392498.JQLH01000001_gene3128 1.49e-118 348.0 2CFYD@1|root,2Z81N@2|Bacteria,4NTUG@976|Bacteroidetes,1I7MQ@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00242 411477.PARMER_00536 6.08e-97 282.0 COG3015@1|root,COG3015@2|Bacteria,4NU1I@976|Bacteroidetes,2FT4X@200643|Bacteroidia,230KN@171551|Porphyromonadaceae 976|Bacteroidetes MP NlpE N-terminal domain - - - - - - - - - - - - NlpE BECNEDJF_00243 411477.PARMER_00534 0.0 1379.0 COG0475@1|root,COG0490@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,4NGF6@976|Bacteroidetes,2FNTX@200643|Bacteroidia,22WU6@171551|Porphyromonadaceae 976|Bacteroidetes P COG0475 Kef-type K transport systems, membrane components - - - ko:K03455 - - - - ko00000 2.A.37 - - Na_H_Exchanger,TrkA_C BECNEDJF_00247 1235803.C825_01271 0.0 1422.0 COG1629@1|root,COG1629@2|Bacteria,4NK0Y@976|Bacteroidetes,2FXCZ@200643|Bacteroidia 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00248 1122931.AUAE01000005_gene3533 1.02e-278 775.0 COG0614@1|root,COG0614@2|Bacteria,4NHES@976|Bacteroidetes,2FWGB@200643|Bacteroidia 976|Bacteroidetes P SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_00249 411477.PARMER_03417 4.6e-244 679.0 COG2239@1|root,COG2239@2|Bacteria,4NGGN@976|Bacteroidetes,2FN1M@200643|Bacteroidia,22WIG@171551|Porphyromonadaceae 976|Bacteroidetes P Acts as a magnesium transporter mgtE - - ko:K06213 - - - - ko00000,ko02000 1.A.26.1 - - CBS,MgtE,MgtE_N BECNEDJF_00250 411477.PARMER_03416 4.56e-210 580.0 COG0030@1|root,COG0030@2|Bacteria,4NERB@976|Bacteroidetes,2FMH1@200643|Bacteroidia,22WN1@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits ksgA GO:0000154,GO:0000179,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016433,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.182 ko:K02528 - - R10716 RC00003,RC03257 ko00000,ko01000,ko03009 - - - RrnaAD BECNEDJF_00251 411477.PARMER_03415 6.73e-243 667.0 COG0392@1|root,COG0392@2|Bacteria,4NGPD@976|Bacteroidetes,2FP5P@200643|Bacteroidia,22WY0@171551|Porphyromonadaceae 976|Bacteroidetes S Lysylphosphatidylglycerol synthase TM region - - - ko:K07027 - - - - ko00000,ko02000 4.D.2 - - LPG_synthase_TM BECNEDJF_00252 411477.PARMER_03414 0.0 966.0 COG2195@1|root,COG2195@2|Bacteria,4NG8I@976|Bacteroidetes,2FM0V@200643|Bacteroidia,22WW0@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the hydrolysis of Xaa-His dipeptides - - - ko:K01270 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - M20_dimer,Peptidase_M20,Peptidase_M28 BECNEDJF_00254 999419.HMPREF1077_03654 4.17e-237 652.0 COG0535@1|root,COG0535@2|Bacteria,4NGWY@976|Bacteroidetes,2FPEF@200643|Bacteroidia,22ZX5@171551|Porphyromonadaceae 976|Bacteroidetes C Elongator protein 3, MiaB family, Radical SAM - - - - - - - - - - - - Fer4_14,Radical_SAM BECNEDJF_00255 411477.PARMER_03692 1.62e-276 755.0 COG1672@1|root,COG1672@2|Bacteria,4NK7Z@976|Bacteroidetes,2G2GJ@200643|Bacteroidia,231IQ@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase domain predominantly from Archaea - - - - - - - - - - - - ATPase_2 BECNEDJF_00256 411477.PARMER_03691 1.62e-185 516.0 COG1028@1|root,COG1028@2|Bacteria,4NFDX@976|Bacteroidetes,2FMSH@200643|Bacteroidia,22XE4@171551|Porphyromonadaceae 976|Bacteroidetes IQ KR domain idnO - 1.1.1.69 ko:K00046 - - - - ko00000,ko01000 - - - adh_short_C2 BECNEDJF_00257 411477.PARMER_03690 2.44e-209 577.0 COG3717@1|root,COG3717@2|Bacteria,4NDUV@976|Bacteroidetes,2FMP5@200643|Bacteroidia,22W8B@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate kduI - 5.3.1.17 ko:K01815 ko00040,map00040 - R04383 RC00541 ko00000,ko00001,ko01000 - - - KduI BECNEDJF_00258 411477.PARMER_03689 8.81e-307 834.0 COG4289@1|root,COG4289@2|Bacteria,4NEU3@976|Bacteroidetes,2G2NU@200643|Bacteroidia,22X3B@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterized protein conserved in bacteria (DUF2264) - - - - - - - - - - - - DUF2264,Glyco_hydro_16 BECNEDJF_00259 411477.PARMER_03688 8.32e-297 808.0 COG4225@1|root,COG4225@2|Bacteria,4NDYS@976|Bacteroidetes,2FM61@200643|Bacteroidia,22XBT@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 BECNEDJF_00260 999419.HMPREF1077_02188 3.92e-269 738.0 COG0226@1|root,COG0573@1|root,COG0226@2|Bacteria,COG0573@2|Bacteria,4NFDD@976|Bacteroidetes,2FNIH@200643|Bacteroidia,22WSA@171551|Porphyromonadaceae 976|Bacteroidetes P probably responsible for the translocation of the substrate across the membrane pstC - - ko:K02037 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1,PBP_like_2 BECNEDJF_00261 411477.PARMER_03685 3.28e-201 558.0 COG0581@1|root,COG0581@2|Bacteria,4NGBA@976|Bacteroidetes,2FP5W@200643|Bacteroidia,22WKG@171551|Porphyromonadaceae 976|Bacteroidetes P phosphate transport system permease pstA - - ko:K02038 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko02000 3.A.1.7 - - BPD_transp_1 BECNEDJF_00262 411477.PARMER_03684 3.16e-181 504.0 COG1117@1|root,COG1117@2|Bacteria,4NFAB@976|Bacteroidetes,2FMN7@200643|Bacteroidia,22XA4@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system pstB - 3.6.3.27 ko:K02036 ko02010,map02010 M00222 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.7 - - ABC_tran BECNEDJF_00263 411477.PARMER_03683 1.56e-155 437.0 COG0704@1|root,COG0704@2|Bacteria,4NNT5@976|Bacteroidetes,2FNP4@200643|Bacteroidia,22XQJ@171551|Porphyromonadaceae 976|Bacteroidetes P Plays a role in the regulation of phosphate uptake phoU - - ko:K02039 - - - - ko00000 - - - PhoU BECNEDJF_00264 411477.PARMER_02415 6.29e-152 428.0 COG1738@1|root,COG1738@2|Bacteria,4NFP3@976|Bacteroidetes,2FM04@200643|Bacteroidia,22X5J@171551|Porphyromonadaceae 976|Bacteroidetes U Involved in the import of queuosine (Q) precursors, required for Q precursor salvage yhhQ - - ko:K09125 - - - - ko00000 - - - Vut_1 BECNEDJF_00265 411477.PARMER_02413 5.74e-155 434.0 COG1011@1|root,COG1011@2|Bacteria,4NQT8@976|Bacteroidetes,2FMXN@200643|Bacteroidia,22YFI@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase yihX - 3.1.3.10 ko:K07025,ko:K20866 ko00010,ko01120,map00010,map01120 - R00947 RC00078 ko00000,ko00001,ko01000 - - - HAD_2 BECNEDJF_00266 411477.PARMER_02412 0.0 890.0 COG0687@1|root,COG0687@2|Bacteria,4NHNY@976|Bacteroidetes,2FNDI@200643|Bacteroidia,22ZDA@171551|Porphyromonadaceae 976|Bacteroidetes P Bacterial extracellular solute-binding protein potD - - ko:K11069 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - SBP_bac_8 BECNEDJF_00267 411477.PARMER_02411 2.35e-173 485.0 COG1177@1|root,COG1177@2|Bacteria,4PKVT@976|Bacteroidetes,2FNE3@200643|Bacteroidia,22Z8C@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component ydcV - - ko:K11070 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - BPD_transp_1 BECNEDJF_00268 411477.PARMER_02410 4.62e-182 507.0 COG1176@1|root,COG1176@2|Bacteria,4P0H6@976|Bacteroidetes,2FN37@200643|Bacteroidia,2301G@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component - - - ko:K11071 ko02010,map02010 M00299 - - ko00000,ko00001,ko00002,ko02000 3.A.1.11.1 - - BPD_transp_1 BECNEDJF_00269 411477.PARMER_02409 0.0 932.0 COG3842@1|root,COG3842@2|Bacteria,4NEZ6@976|Bacteroidetes,2G2SA@200643|Bacteroidia,231YA@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the ABC transporter complex PotABCD involved in spermidine putrescine import. Responsible for energy coupling to the transport system potA - 3.6.3.29,3.6.3.30,3.6.3.31 ko:K02010,ko:K02017,ko:K10112,ko:K11072 ko02010,map02010 M00189,M00190,M00194,M00196,M00197,M00200,M00201,M00206,M00207,M00299,M00491,M00602,M00605,M00606 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.1,3.A.1.10,3.A.1.11.1,3.A.1.8 - - ABC_tran,TOBE_2 BECNEDJF_00270 411477.PARMER_02408 4.1e-272 746.0 COG2233@1|root,COG2233@2|Bacteria,4NE5A@976|Bacteroidetes,2FPX6@200643|Bacteroidia,22WTV@171551|Porphyromonadaceae 976|Bacteroidetes F Uracil transporter pyrP - - ko:K02824 - - - - ko00000,ko02000 2.A.40.1.1,2.A.40.1.2 - - Xan_ur_permease BECNEDJF_00271 411477.PARMER_02407 0.0 1701.0 COG3250@1|root,COG3250@2|Bacteria,4NEDF@976|Bacteroidetes,2FNNU@200643|Bacteroidia,22ZW0@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4982) lacZ_2 - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_00272 411477.PARMER_01932 4.46e-207 577.0 COG0642@1|root,COG0642@2|Bacteria,4PM6U@976|Bacteroidetes,2G0H6@200643|Bacteroidia,22XUP@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HAMP,HATPase_c,HisKA BECNEDJF_00273 411477.PARMER_03354 0.0 927.0 COG1966@1|root,COG1966@2|Bacteria,4NFPD@976|Bacteroidetes,2FM48@200643|Bacteroidia,22X1U@171551|Porphyromonadaceae 976|Bacteroidetes T Carbon starvation protein cstA - - ko:K06200 - - - - ko00000 - - - CstA,CstA_5TM BECNEDJF_00274 411477.PARMER_03355 1.25e-92 271.0 COG1610@1|root,COG1610@2|Bacteria,4NQFI@976|Bacteroidetes,2FN46@200643|Bacteroidia,22Y3Y@171551|Porphyromonadaceae 976|Bacteroidetes S Glutamyl-tRNA amidotransferase - - - ko:K09117 - - - - ko00000 - - - YqeY BECNEDJF_00275 411477.PARMER_03356 2.31e-312 852.0 COG0206@1|root,COG0206@2|Bacteria,4NF8N@976|Bacteroidetes,2FMJV@200643|Bacteroidia,22WFV@171551|Porphyromonadaceae 976|Bacteroidetes D Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity ftsZ - - ko:K03531 ko04112,map04112 - - - ko00000,ko00001,ko02048,ko03036,ko04812 - - - FtsZ_C,Tubulin BECNEDJF_00276 411477.PARMER_03357 1.55e-309 847.0 COG0849@1|root,COG0849@2|Bacteria,4NE0V@976|Bacteroidetes,2FMUG@200643|Bacteroidia,22X25@171551|Porphyromonadaceae 976|Bacteroidetes D Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring ftsA - - ko:K03590 ko04112,map04112 - - - ko00000,ko00001,ko03036,ko04812 - - - FtsA,SHS2_FTSA BECNEDJF_00277 999419.HMPREF1077_01971 1.81e-167 468.0 COG1589@1|root,COG1589@2|Bacteria,4NGPN@976|Bacteroidetes,2FME2@200643|Bacteroidia,22XZ6@171551|Porphyromonadaceae 976|Bacteroidetes M Cell division protein FtsQ ftsQ - - ko:K03589 ko04112,map04112 - - - ko00000,ko00001,ko03036 - - - FtsQ BECNEDJF_00278 411477.PARMER_03360 0.0 939.0 COG0773@1|root,COG0773@2|Bacteria,4NE1V@976|Bacteroidetes,2FM6G@200643|Bacteroidia,22WMY@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the MurCDEF family murC - 6.3.2.8 ko:K01924 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M BECNEDJF_00279 411477.PARMER_03361 1.12e-265 728.0 COG0707@1|root,COG0707@2|Bacteria,4NE6D@976|Bacteroidetes,2FMND@200643|Bacteroidia,22X87@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II) murG - 2.4.1.227 ko:K02563 ko00550,ko01100,ko01502,ko04112,map00550,map01100,map01502,map04112 - R05032,R05662 RC00005,RC00049 ko00000,ko00001,ko01000,ko01011 - GT28 - Glyco_tran_28_C,Glyco_transf_28 BECNEDJF_00280 411477.PARMER_03362 0.0 873.0 COG0772@1|root,COG0772@2|Bacteria,4NFIM@976|Bacteroidetes,2FM93@200643|Bacteroidia,22WW9@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the SEDS family ftsW - - ko:K03588 ko04112,map04112 - - - ko00000,ko00001,ko02000,ko03036 2.A.103.1 - - FTSW_RODA_SPOVE BECNEDJF_00281 411477.PARMER_03363 3.32e-48 165.0 COG0771@1|root,COG0771@2|Bacteria,4NEFF@976|Bacteroidetes,2FP0X@200643|Bacteroidia,22VXQ@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA) murD - 6.3.2.9 ko:K01925 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R02783 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase_C,Mur_ligase_M BECNEDJF_00282 411477.PARMER_02004 0.0 2022.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family bepE_1 - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran BECNEDJF_00283 411477.PARMER_02005 2.77e-307 840.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FND5@200643|Bacteroidia,22W3J@171551|Porphyromonadaceae 976|Bacteroidetes MU Efflux transporter, outer membrane factor oprM_1 - - - - - - - - - - - OEP BECNEDJF_00284 411477.PARMER_02122 7.93e-219 603.0 COG0540@1|root,COG0540@2|Bacteria,4NFIU@976|Bacteroidetes,2FN60@200643|Bacteroidia,22W4C@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the ATCase OTCase family pyrB - 2.1.3.2 ko:K00609 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N BECNEDJF_00285 411477.PARMER_02123 5.07e-108 311.0 COG1781@1|root,COG1781@2|Bacteria,4NP1H@976|Bacteroidetes,2G380@200643|Bacteroidia,2320K@171551|Porphyromonadaceae 976|Bacteroidetes F Involved in allosteric regulation of aspartate carbamoyltransferase pyrI - - ko:K00610 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R01397 RC00064,RC02850 ko00000,ko00001,ko00002 - - - PyrI,PyrI_C BECNEDJF_00286 411477.PARMER_02124 7.99e-142 399.0 COG1853@1|root,COG1853@2|Bacteria,4NF4H@976|Bacteroidetes,2FMUN@200643|Bacteroidia,22W3S@171551|Porphyromonadaceae 976|Bacteroidetes S flavin reductase - - - - - - - - - - - - Flavin_Reduct BECNEDJF_00287 411477.PARMER_02125 6.63e-174 484.0 2AR7H@1|root,31GH7@2|Bacteria,4NQXT@976|Bacteroidetes,2FQE3@200643|Bacteroidia,22YUP@171551|Porphyromonadaceae 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 BECNEDJF_00288 411477.PARMER_02126 1.46e-81 241.0 arCOG09714@1|root,316P9@2|Bacteria,4NPX3@976|Bacteroidetes,2FSNU@200643|Bacteroidia,231QA@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG16854 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_00290 411477.PARMER_02127 1.34e-131 372.0 COG0655@1|root,COG0655@2|Bacteria,4NHHY@976|Bacteroidetes,2FQJ4@200643|Bacteroidia,22XTE@171551|Porphyromonadaceae 976|Bacteroidetes S NADPH-dependent FMN reductase ywqN - - - - - - - - - - - FMN_red BECNEDJF_00291 457424.BFAG_04300 1.94e-33 117.0 COG2261@1|root,COG2261@2|Bacteria,4NUXX@976|Bacteroidetes,2FUM7@200643|Bacteroidia,4ARQR@815|Bacteroidaceae 976|Bacteroidetes S Transglycosylase associated protein - - - - - - - - - - - - Transgly_assoc BECNEDJF_00292 411477.PARMER_02130 3.92e-135 382.0 COG1556@1|root,COG1556@2|Bacteria,4NQSF@976|Bacteroidetes,2FQAQ@200643|Bacteroidia,22XWN@171551|Porphyromonadaceae 976|Bacteroidetes S LUD domain lutC - - ko:K00782 - - - - ko00000 - - - LUD_dom BECNEDJF_00293 411479.BACUNI_03704 3.81e-104 304.0 2DC1C@1|root,2ZCDH@2|Bacteria,4NMEB@976|Bacteroidetes,2G2H6@200643|Bacteroidia,4AVYY@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF3823) - - - - - - - - - - - - DUF3823 BECNEDJF_00294 411477.PARMER_02800 1.44e-105 333.0 COG1629@1|root,COG1629@2|Bacteria,4NIPG@976|Bacteroidetes,2FRQY@200643|Bacteroidia,22Z8M@171551|Porphyromonadaceae 976|Bacteroidetes P Secretin and TonB N terminus short domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00295 411477.PARMER_02800 0.0 1846.0 COG1629@1|root,COG1629@2|Bacteria,4NIPG@976|Bacteroidetes,2FRQY@200643|Bacteroidia,22Z8M@171551|Porphyromonadaceae 976|Bacteroidetes P Secretin and TonB N terminus short domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00296 411477.PARMER_02799 0.0 1260.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FN5G@200643|Bacteroidia,22ZR8@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00297 411477.PARMER_02798 0.0 1356.0 COG2081@1|root,COG2081@2|Bacteria,4PMNY@976|Bacteroidetes,2FQ67@200643|Bacteroidia,22W1E@171551|Porphyromonadaceae 976|Bacteroidetes S FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored BECNEDJF_00298 411477.PARMER_00838 0.0 991.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FMQ7@200643|Bacteroidia,22Z8B@171551|Porphyromonadaceae 976|Bacteroidetes S Virulence-associated protein E - - - - - - - - - - - - VirE,VirE_N BECNEDJF_00300 411477.PARMER_02402 1.72e-215 597.0 2DB8U@1|root,2Z7SW@2|Bacteria,4NEUK@976|Bacteroidetes,2FQCH@200643|Bacteroidia,22Z94@171551|Porphyromonadaceae 976|Bacteroidetes S Alginate lyase - - - - - - - - - - - - Alginate_lyase BECNEDJF_00301 411477.PARMER_01136 0.0 1885.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22XBF@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00302 411477.PARMER_01135 1.39e-312 858.0 COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,2FNFW@200643|Bacteroidia,22ZQW@171551|Porphyromonadaceae 976|Bacteroidetes E Starch-binding associating with outer membrane - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_00303 411477.PARMER_01135 8.57e-141 413.0 COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,2FNFW@200643|Bacteroidia,22ZQW@171551|Porphyromonadaceae 976|Bacteroidetes E Starch-binding associating with outer membrane - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_00304 411477.PARMER_01134 0.0 937.0 COG3579@1|root,COG3579@2|Bacteria,4NJ3J@976|Bacteroidetes,2FMZY@200643|Bacteroidia,22WXZ@171551|Porphyromonadaceae 976|Bacteroidetes M aminopeptidase pepC - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1_2 BECNEDJF_00305 411477.PARMER_01133 4.33e-62 190.0 COG3877@1|root,COG3877@2|Bacteria,4NVHG@976|Bacteroidetes,2FT1Y@200643|Bacteroidia,22YRD@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2089) - - - - - - - - - - - - DUF2089 BECNEDJF_00306 411477.PARMER_01132 1.48e-141 399.0 2C6HF@1|root,32WTS@2|Bacteria,4NSUD@976|Bacteroidetes,2FRF4@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00307 411477.PARMER_01131 1.91e-157 441.0 COG0546@1|root,COG0546@2|Bacteria,4NMPP@976|Bacteroidetes,2FS95@200643|Bacteroidia,22XY9@171551|Porphyromonadaceae 976|Bacteroidetes S HAD-hyrolase-like - - 3.1.3.18 ko:K01091 ko00630,ko01100,ko01110,ko01130,map00630,map01100,map01110,map01130 - R01334 RC00017 ko00000,ko00001,ko01000 - - - HAD_2 BECNEDJF_00308 411477.PARMER_01130 6.53e-102 297.0 COG0663@1|root,COG0663@2|Bacteria,4NG6R@976|Bacteroidetes,2FMKU@200643|Bacteroidia,22W37@171551|Porphyromonadaceae 976|Bacteroidetes S acetyltransferase dapH - - - - - - - - - - - Hexapep BECNEDJF_00309 411477.PARMER_01129 6.91e-168 483.0 COG0006@1|root,COG0006@2|Bacteria,4NI1J@976|Bacteroidetes,2FNZP@200643|Bacteroidia,22WTJ@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase M24 - - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Creatinase_N_2,Peptidase_M24,Peptidase_M24_C BECNEDJF_00310 411477.PARMER_00871 7.29e-271 739.0 COG3507@1|root,COG3507@2|Bacteria,4NHZW@976|Bacteroidetes,2FM56@200643|Bacteroidia 976|Bacteroidetes G hydrolase, family 43 - - 3.2.1.99 ko:K06113 - - - - ko00000,ko01000 - GH43 - Glyco_hydro_43 BECNEDJF_00311 411477.PARMER_00870 0.0 1301.0 COG1435@1|root,COG1435@2|Bacteria,4NKPJ@976|Bacteroidetes,2FQ2P@200643|Bacteroidia,2323U@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00312 411477.PARMER_00869 0.0 2380.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22XIY@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00313 411477.PARMER_00868 1.41e-241 664.0 COG3712@1|root,COG3712@2|Bacteria,4NM0I@976|Bacteroidetes,2FR5N@200643|Bacteroidia,23071@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_00314 411477.PARMER_00867 2.09e-131 373.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,230N9@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00315 411477.PARMER_00866 2.8e-85 250.0 COG0526@1|root,COG0526@2|Bacteria,4PMUP@976|Bacteroidetes,2G0GV@200643|Bacteroidia,231IA@171551|Porphyromonadaceae 976|Bacteroidetes O F plasmid transfer operon protein - - - - - - - - - - - - Thioredoxin BECNEDJF_00316 411477.PARMER_00864 1.48e-107 339.0 COG0507@1|root,COG1112@1|root,COG1502@1|root,COG0507@2|Bacteria,COG1112@2|Bacteria,COG1502@2|Bacteria,4NIRR@976|Bacteroidetes,2FQY4@200643|Bacteroidia 976|Bacteroidetes L AAA domain - - - - - - - - - - - - AAA_11,AAA_12,DUF2726,PLDc_2 BECNEDJF_00317 999419.HMPREF1077_01475 1.08e-117 345.0 COG0477@1|root,COG2814@2|Bacteria,4NE7F@976|Bacteroidetes,2FQAA@200643|Bacteroidia,22VYY@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1,MFS_1_like,Sugar_tr BECNEDJF_00318 411477.PARMER_02818 1.37e-201 558.0 COG2169@1|root,COG2169@2|Bacteria,4P21T@976|Bacteroidetes,2FR6F@200643|Bacteroidia,231H2@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 BECNEDJF_00319 999419.HMPREF1077_00914 2.82e-193 536.0 COG1477@1|root,COG1477@2|Bacteria,4NQ1T@976|Bacteroidetes,2FRR5@200643|Bacteroidia,2307Z@171551|Porphyromonadaceae 976|Bacteroidetes H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein - - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE BECNEDJF_00320 411477.PARMER_04150 1.31e-207 573.0 2CPS1@1|root,32SJR@2|Bacteria,4NTZ6@976|Bacteroidetes,2FPC8@200643|Bacteroidia,22Y5W@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3298) - - - - - - - - - - - - DUF3298,DUF4163 BECNEDJF_00321 411477.PARMER_04151 4.85e-158 443.0 COG0357@1|root,COG0357@2|Bacteria,4NEJG@976|Bacteroidetes,2FMRQ@200643|Bacteroidia,22X1I@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the N7 position of a guanine in 16S rRNA rsmG GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016435,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036265,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0070043,GO:0070475,GO:0070476,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.170 ko:K03501 - - - - ko00000,ko01000,ko03009,ko03036 - - - GidB BECNEDJF_00322 999419.HMPREF1077_00908 9.51e-155 434.0 COG0491@1|root,COG0491@2|Bacteria,4NE2Y@976|Bacteroidetes,2FSQ1@200643|Bacteroidia,22XXM@171551|Porphyromonadaceae 976|Bacteroidetes P metallo-beta-lactamase - - - - - - - - - - - - Lactamase_B BECNEDJF_00323 411477.PARMER_04153 0.0 1896.0 COG0403@1|root,COG1003@1|root,COG0403@2|Bacteria,COG1003@2|Bacteria,4NEDE@976|Bacteroidetes,2FKZJ@200643|Bacteroidia,22W2V@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the GcvP family gcvP - 1.4.4.2 ko:K00281,ko:K00283 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221,R03425 RC00022,RC00929,RC02834,RC02880 ko00000,ko00001,ko00002,ko01000 - - - Aminotran_5,GDC-P BECNEDJF_00324 411477.PARMER_04155 3.34e-213 589.0 COG2086@1|root,COG2086@2|Bacteria,4NFWB@976|Bacteroidetes,2FMG3@200643|Bacteroidia,22W81@171551|Porphyromonadaceae 976|Bacteroidetes C Electron transfer flavoprotein etfB - - ko:K03521 - - - - ko00000 - - - ETF BECNEDJF_00325 411477.PARMER_04156 9.24e-246 674.0 COG2025@1|root,COG2025@2|Bacteria,4NFSE@976|Bacteroidetes,2FMEK@200643|Bacteroidia,22W4A@171551|Porphyromonadaceae 976|Bacteroidetes C Electron transfer flavoprotein etfA - - ko:K03522 - - - - ko00000,ko04147 - - - ETF,ETF_alpha BECNEDJF_00327 411477.PARMER_00566 5.01e-122 354.0 COG4641@1|root,COG4641@2|Bacteria 2|Bacteria M Protein conserved in bacteria cpsH GO:0000271,GO:0005975,GO:0005976,GO:0006629,GO:0008150,GO:0008152,GO:0008610,GO:0008653,GO:0009058,GO:0009059,GO:0009103,GO:0009244,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0033692,GO:0034637,GO:0034645,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0046401,GO:0071704,GO:1901135,GO:1901137,GO:1901576,GO:1903509 - ko:K06320,ko:K12986 - - - - ko00000,ko01000,ko01003,ko01005 - GT8 - DUF3880,Glyco_trans_1_2 BECNEDJF_00328 411477.PARMER_00565 5.89e-123 355.0 COG0438@1|root,COG0438@2|Bacteria 2|Bacteria M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_2,Glyco_transf_4,Glycos_transf_1,Glycos_transf_2 BECNEDJF_00330 411477.PARMER_01375 0.0 1176.0 COG4206@1|root,COG4206@2|Bacteria,4NGYD@976|Bacteroidetes,2FNFI@200643|Bacteroidia,22X28@171551|Porphyromonadaceae 976|Bacteroidetes H Psort location OuterMembrane, score - - - - - - - - - - - - TonB_dep_Rec BECNEDJF_00331 411477.PARMER_01374 0.0 1501.0 COG0457@1|root,COG1729@1|root,COG4105@1|root,COG0457@2|Bacteria,COG1729@2|Bacteria,COG4105@2|Bacteria,4NE4W@976|Bacteroidetes,2FM3C@200643|Bacteroidia,22X5K@171551|Porphyromonadaceae 976|Bacteroidetes G Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_16,TPR_2,TPR_21,TPR_6,TPR_8 BECNEDJF_00332 999419.HMPREF1077_00409 6.97e-114 327.0 COG1051@1|root,COG1051@2|Bacteria,4NP2X@976|Bacteroidetes,2FMSZ@200643|Bacteroidia,22Y32@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the Nudix hydrolase family - - 3.6.1.55 ko:K03574 - - - - ko00000,ko01000,ko03400 - - - NUDIX,zf-NADH-PPase BECNEDJF_00333 411477.PARMER_01371 4.82e-227 625.0 COG1940@1|root,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,2FNGN@200643|Bacteroidia,22WUD@171551|Porphyromonadaceae 976|Bacteroidetes G glucokinase glcK - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - ROK BECNEDJF_00334 411477.PARMER_01370 2.42e-92 269.0 COG0346@1|root,COG0346@2|Bacteria,4NPHB@976|Bacteroidetes,2FSJQ@200643|Bacteroidia,22XUZ@171551|Porphyromonadaceae 976|Bacteroidetes E Lactoylglutathione lyase gloA - 4.4.1.5 ko:K01759 ko00620,map00620 - R02530 RC00004,RC00740 ko00000,ko00001,ko01000 - - - Glyoxalase BECNEDJF_00335 411477.PARMER_01369 1.7e-180 501.0 COG2220@1|root,COG2220@2|Bacteria,4NHYV@976|Bacteroidetes,2FPWS@200643|Bacteroidia,22WWH@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-lactamase superfamily domain - - - - - - - - - - - - Lactamase_B_3 BECNEDJF_00336 411477.PARMER_01368 6.35e-283 773.0 COG0027@1|root,COG0027@2|Bacteria,4PKAW@976|Bacteroidetes,2FMB2@200643|Bacteroidia,22XEZ@171551|Porphyromonadaceae 976|Bacteroidetes F Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate purT - 2.1.2.2 ko:K08289 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - - ATP-grasp,Epimerase BECNEDJF_00337 411477.PARMER_03779 2.73e-202 560.0 COG0320@1|root,COG0320@2|Bacteria,4NEB5@976|Bacteroidetes,2FNBV@200643|Bacteroidia,22W8Q@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives lipA GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006464,GO:0006629,GO:0006631,GO:0006633,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0009058,GO:0009106,GO:0009107,GO:0009108,GO:0009249,GO:0009987,GO:0010467,GO:0016053,GO:0016740,GO:0016782,GO:0016783,GO:0016992,GO:0018065,GO:0018130,GO:0018193,GO:0018205,GO:0019538,GO:0019752,GO:0032787,GO:0036211,GO:0043170,GO:0043412,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0046483,GO:0051186,GO:0051188,GO:0051604,GO:0070283,GO:0071704,GO:0072330,GO:1901360,GO:1901362,GO:1901564,GO:1901576 2.8.1.8 ko:K03644 ko00785,ko01100,map00785,map01100 - R07767,R07768 RC01978 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB,Lip_prot_lig_C,Radical_SAM BECNEDJF_00338 411477.PARMER_03777 0.0 1469.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,2FNBA@200643|Bacteroidia,22WW6@171551|Porphyromonadaceae 976|Bacteroidetes EU Peptidase, S9A B C family, catalytic domain protein dpp - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 BECNEDJF_00339 411477.PARMER_03778 5.39e-230 634.0 COG1242@1|root,COG1242@2|Bacteria,4NGK6@976|Bacteroidetes,2FPR8@200643|Bacteroidia,22WQ2@171551|Porphyromonadaceae 976|Bacteroidetes S radical SAM protein - - - ko:K07139 - - - - ko00000 - - - Radical_SAM,Radical_SAM_C BECNEDJF_00340 411477.PARMER_03776 7.91e-115 329.0 2E5XB@1|root,330M9@2|Bacteria,4NW0P@976|Bacteroidetes,2FS56@200643|Bacteroidia,22YPM@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4251) - - - - - - - - - - - - DUF4251 BECNEDJF_00341 411477.PARMER_03775 0.0 1714.0 COG0474@1|root,COG0474@2|Bacteria,4NERM@976|Bacteroidetes,2FMEC@200643|Bacteroidia,22WNC@171551|Porphyromonadaceae 976|Bacteroidetes P Calcium-translocating P-type ATPase, PMCA-type - - 3.6.3.8 ko:K01537 - - - - ko00000,ko01000 3.A.3.2 - - Cation_ATPase,Cation_ATPase_C,Cation_ATPase_N,E1-E2_ATPase,Hydrolase,Hydrolase_3 BECNEDJF_00342 411477.PARMER_03774 3.49e-306 835.0 COG0148@1|root,COG0148@2|Bacteria,4NF5M@976|Bacteroidetes,2FMNI@200643|Bacteroidia,22X7E@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis eno - 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 - - - Enolase_C,Enolase_N BECNEDJF_00343 585543.HMPREF0969_03363 2.73e-68 210.0 2BZQV@1|root,3277E@2|Bacteria,4NR7X@976|Bacteroidetes,2G36H@200643|Bacteroidia 976|Bacteroidetes S Head fiber protein - - - - - - - - - - - - Phage_head_fibr BECNEDJF_00344 585543.HMPREF0969_03362 1.53e-268 735.0 28M2B@1|root,2ZAGU@2|Bacteria,4NJ9Q@976|Bacteroidetes,2FQU4@200643|Bacteroidia,4APTA@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00345 999419.HMPREF1077_01848 0.0 970.0 COG0178@1|root,COG0178@2|Bacteria,4NEHM@976|Bacteroidetes,2FNFZ@200643|Bacteroidia,22X2V@171551|Porphyromonadaceae 976|Bacteroidetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA1 - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - AAA_21,ABC_tran BECNEDJF_00346 1121098.HMPREF1534_02086 3.79e-20 83.6 2EG9E@1|root,33A17@2|Bacteria,4NY7F@976|Bacteroidetes,2FUY3@200643|Bacteroidia,4ASM5@815|Bacteroidaceae 976|Bacteroidetes S Antitoxin component of a toxin-antitoxin (TA) module - - - - - - - - - - - - PhdYeFM_antitox BECNEDJF_00347 999419.HMPREF1077_00196 8.33e-138 389.0 COG2885@1|root,COG2885@2|Bacteria,4NN9C@976|Bacteroidetes,2FPCM@200643|Bacteroidia,2305C@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3575) - - - - - - - - - - - - DUF3575 BECNEDJF_00348 411477.PARMER_01591 0.0 916.0 COG2885@1|root,COG5010@1|root,COG2885@2|Bacteria,COG5010@2|Bacteria,4NJN8@976|Bacteroidetes,2FMCB@200643|Bacteroidia,22X1J@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function, B. Theta Gene description (DUF3868) - - - - - - - - - - - - DUF3868,OmpA BECNEDJF_00350 411477.PARMER_01589 1.02e-149 421.0 COG1564@1|root,COG1564@2|Bacteria,4NPR1@976|Bacteroidetes,2FP1N@200643|Bacteroidia,22ZWI@171551|Porphyromonadaceae 976|Bacteroidetes H Thiamin pyrophosphokinase, catalytic domain thiN - 2.7.6.2 ko:K00949 ko00730,ko01100,map00730,map01100 - R00619 RC00002,RC00017 ko00000,ko00001,ko01000 - - - TPK_catalytic BECNEDJF_00351 411477.PARMER_01588 7.52e-144 405.0 COG3201@1|root,COG3201@2|Bacteria,4NFJI@976|Bacteroidetes,2FRYG@200643|Bacteroidia,22YI0@171551|Porphyromonadaceae 976|Bacteroidetes H nicotinamide mononucleotide transporter pnuC - - ko:K03811 - - - - ko00000,ko02000 4.B.1.1 - - NMN_transporter BECNEDJF_00352 411477.PARMER_01587 0.0 1484.0 COG4773@1|root,COG4773@2|Bacteria,4P1XR@976|Bacteroidetes,2G0GZ@200643|Bacteroidia,2323W@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec BECNEDJF_00353 411477.PARMER_01586 2.05e-104 302.0 COG0779@1|root,COG0779@2|Bacteria,4NQ32@976|Bacteroidetes,2FSM9@200643|Bacteroidia,22Y41@171551|Porphyromonadaceae 976|Bacteroidetes S Required for maturation of 30S ribosomal subunits rimP GO:0000028,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:1901564,GO:1901566,GO:1901576 - ko:K09748 - - - - ko00000,ko03009 - - - DUF150,DUF150_C BECNEDJF_00354 411477.PARMER_01585 3.85e-297 811.0 COG0195@1|root,COG0195@2|Bacteria,4NFGA@976|Bacteroidetes,2FNJF@200643|Bacteroidia,22WBR@171551|Porphyromonadaceae 976|Bacteroidetes K Participates in both transcription termination and antitermination nusA - - ko:K02600 - - - - ko00000,ko03009,ko03021 - - - KH_5,NusA_N,S1 BECNEDJF_00357 411477.PARMER_00842 1.67e-292 800.0 COG3119@1|root,COG3119@2|Bacteria,4NFGI@976|Bacteroidetes,2FMUC@200643|Bacteroidia 976|Bacteroidetes P COG COG3119 Arylsulfatase A and related enzymes - - - - - - - - - - - - DUF4976,Sulfatase BECNEDJF_00358 411477.PARMER_03335 0.0 963.0 COG0673@1|root,COG0673@2|Bacteria,4NEN5@976|Bacteroidetes,2FP28@200643|Bacteroidia,22ZVD@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA BECNEDJF_00359 411477.PARMER_00934 0.0 1316.0 COG0760@1|root,COG0760@2|Bacteria,4NDZZ@976|Bacteroidetes,2FN8C@200643|Bacteroidia,22W3C@171551|Porphyromonadaceae 976|Bacteroidetes O peptidylprolyl isomerase ppiD - 5.2.1.8 ko:K01802,ko:K03770 - - - - ko00000,ko01000,ko03110 - - - Rotamase_2,Rotamase_3,SurA_N_2 BECNEDJF_00360 999419.HMPREF1077_00714 8.75e-237 652.0 COG0820@1|root,COG0820@2|Bacteria,4NFH5@976|Bacteroidetes,2FPJH@200643|Bacteroidia,22WJ0@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs rlmN GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006364,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016740,GO:0016741,GO:0022613,GO:0030488,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0070475,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140101,GO:0140102,GO:1901360 2.1.1.192 ko:K06941 - - - - ko00000,ko01000,ko03009 - - - Fer4_14,Radical_SAM BECNEDJF_00361 999419.HMPREF1077_00715 1.08e-246 677.0 COG0322@1|root,COG0322@2|Bacteria,4NGEV@976|Bacteroidetes,2FNVF@200643|Bacteroidia,22XZM@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF4837) - - - - - - - - - - - - DUF4837 BECNEDJF_00362 411477.PARMER_00939 2.62e-261 716.0 COG1995@1|root,COG1995@2|Bacteria,4NEUR@976|Bacteroidetes,2FN0X@200643|Bacteroidia,22WSX@171551|Porphyromonadaceae 976|Bacteroidetes C Belongs to the PdxA family pdxA - 1.1.1.262 ko:K00097 ko00750,ko01100,map00750,map01100 M00124 R05681,R05837,R07406 RC00089,RC00675,RC01475 ko00000,ko00001,ko00002,ko01000 - - - PdxA BECNEDJF_00363 411477.PARMER_00940 1.19e-107 310.0 COG0615@1|root,COG0615@2|Bacteria,4NM8I@976|Bacteroidetes,2FS6T@200643|Bacteroidia,22XQH@171551|Porphyromonadaceae 976|Bacteroidetes IM Glycerol-3-phosphate cytidylyltransferase aepX - 2.7.7.15,2.7.7.39,5.4.2.9 ko:K00968,ko:K00980,ko:K01841 ko00440,ko00564,ko01100,ko01120,ko01130,ko05231,map00440,map00564,map01100,map01120,map01130,map05231 M00090 R00661,R00856,R01890,R02590 RC00002,RC02792 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like,PEP_mutase BECNEDJF_00364 411477.PARMER_00941 3.02e-171 478.0 COG1028@1|root,COG1028@2|Bacteria,4NJKS@976|Bacteroidetes,2FQU2@200643|Bacteroidia,22XDC@171551|Porphyromonadaceae 976|Bacteroidetes IQ Dehydrogenase - - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short,adh_short_C2 BECNEDJF_00365 411477.PARMER_00942 7.01e-212 585.0 COG0558@1|root,COG0558@2|Bacteria,4NG8X@976|Bacteroidetes,2FQ5M@200643|Bacteroidia,22WXQ@171551|Porphyromonadaceae 976|Bacteroidetes I CDP-alcohol phosphatidyltransferase - - - - - - - - - - - - CDP-OH_P_transf,HAD_2 BECNEDJF_00366 411477.PARMER_00943 2.96e-203 561.0 COG0204@1|root,COG0204@2|Bacteria,4NF25@976|Bacteroidetes,2FSAD@200643|Bacteroidia,22XTQ@171551|Porphyromonadaceae 976|Bacteroidetes I Phosphate acyltransferases - - - - - - - - - - - - Acetyltransf_5,Acyltransferase BECNEDJF_00368 999419.HMPREF1077_01036 8.42e-205 567.0 COG0484@1|root,COG0484@2|Bacteria,4NE4X@976|Bacteroidetes,2FP5X@200643|Bacteroidia,22WQ4@171551|Porphyromonadaceae 976|Bacteroidetes O DnaJ molecular chaperone homology domain dnaJ2 - - ko:K03686,ko:K05516 - - - - ko00000,ko03029,ko03036,ko03110 - - - DnaJ,DnaJ_C BECNEDJF_00369 585543.HMPREF0969_03491 8.06e-239 660.0 2DBGN@1|root,2Z95B@2|Bacteria,4NK88@976|Bacteroidetes,2FQIX@200643|Bacteroidia,4APGA@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4374 BECNEDJF_00370 411477.PARMER_03145 1.21e-135 384.0 COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,2FNCK@200643|Bacteroidia,22W5R@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K03772,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C,FKBP_N BECNEDJF_00371 411477.PARMER_03146 1.61e-165 463.0 COG0545@1|root,COG0545@2|Bacteria,4NDW4@976|Bacteroidetes,2G31Y@200643|Bacteroidia,22XYD@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K03772,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C,FKBP_N BECNEDJF_00372 411477.PARMER_03147 4.68e-109 313.0 COG1522@1|root,COG1522@2|Bacteria,4NMEN@976|Bacteroidetes,2FMP2@200643|Bacteroidia,22XKX@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator asnC - - ko:K03718 - - - - ko00000,ko03000 - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type BECNEDJF_00373 411477.PARMER_03148 0.0 962.0 COG1404@1|root,COG1404@2|Bacteria,4NEIJ@976|Bacteroidetes,2FNT5@200643|Bacteroidia,22W7I@171551|Porphyromonadaceae 976|Bacteroidetes O Subtilase family aprN - - - - - - - - - - - Peptidase_S8 BECNEDJF_00374 411477.PARMER_03149 1.93e-303 829.0 COG1570@1|root,COG1570@2|Bacteria,4NE64@976|Bacteroidetes,2FMMA@200643|Bacteroidia,22WD7@171551|Porphyromonadaceae 976|Bacteroidetes L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseA - 3.1.11.6 ko:K03601 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_L,tRNA_anti_2 BECNEDJF_00375 411477.PARMER_03150 3.95e-33 114.0 COG1722@1|root,COG1722@2|Bacteria,4NXJV@976|Bacteroidetes,2FVH6@200643|Bacteroidia,22YWF@171551|Porphyromonadaceae 976|Bacteroidetes L Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides xseB - 3.1.11.6 ko:K03602 ko03430,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - Exonuc_VII_S BECNEDJF_00376 411477.PARMER_03151 1.51e-170 475.0 COG1211@1|root,COG1211@2|Bacteria,4NMB5@976|Bacteroidetes,2FM5H@200643|Bacteroidia,22XSS@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the formation of 4-diphosphocytidyl-2-C- methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4- phosphate (MEP) ispD GO:0003674,GO:0003824,GO:0016740,GO:0016772,GO:0016779,GO:0050518,GO:0070567 2.7.7.60 ko:K00991 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05633 RC00002 ko00000,ko00001,ko00002,ko01000 - - - IspD BECNEDJF_00377 411477.PARMER_03152 0.0 1374.0 COG1200@1|root,COG1200@2|Bacteria,4NDZV@976|Bacteroidetes,2FNKB@200643|Bacteroidia,22WQP@171551|Porphyromonadaceae 976|Bacteroidetes L Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA) recG - 3.6.4.12 ko:K03655 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecG_wedge BECNEDJF_00379 999419.HMPREF1077_00033 2.41e-279 766.0 COG0739@1|root,COG1388@1|root,COG0739@2|Bacteria,COG1388@2|Bacteria,4NGHH@976|Bacteroidetes,2FMHT@200643|Bacteroidia,22XCK@171551|Porphyromonadaceae 976|Bacteroidetes M peptidase mepM_1 - - - - - - - - - - - LysM,Peptidase_M23 BECNEDJF_00381 999419.HMPREF1077_02579 0.0 1725.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00382 411477.PARMER_02493 0.0 1211.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00383 411477.PARMER_02491 4.98e-251 687.0 COG2234@1|root,COG2234@2|Bacteria,4NFDJ@976|Bacteroidetes,2FQ2M@200643|Bacteroidia,22XAT@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - Peptidase_M28 BECNEDJF_00385 411477.PARMER_02489 9.03e-126 358.0 COG0288@1|root,COG0288@2|Bacteria,4NW0D@976|Bacteroidetes,2FPAT@200643|Bacteroidia,230GS@171551|Porphyromonadaceae 976|Bacteroidetes P Reversible hydration of carbon dioxide cah - 4.2.1.1 ko:K01673 ko00910,map00910 - R00132,R10092 RC02807 ko00000,ko00001,ko01000 - - - Pro_CA BECNEDJF_00386 411477.PARMER_02487 3.46e-179 499.0 COG0561@1|root,COG0561@2|Bacteria,4NEG2@976|Bacteroidetes,2FMS2@200643|Bacteroidia,22WX9@171551|Porphyromonadaceae 976|Bacteroidetes S Sucrose-6F-phosphate phosphohydrolase - - - - - - - - - - - - Hydrolase_3 BECNEDJF_00388 1158294.JOMI01000003_gene2501 2.29e-63 195.0 COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,2FSIM@200643|Bacteroidia 976|Bacteroidetes K Transcriptional regulator, BlaI MecI CopY family - - - - - - - - - - - - Penicillinase_R BECNEDJF_00389 1235803.C825_02344 2.71e-133 405.0 COG4219@1|root,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22ZGK@171551|Porphyromonadaceae 976|Bacteroidetes KT BlaR1 peptidase M56 - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C BECNEDJF_00391 411477.PARMER_02698 1.75e-255 701.0 COG3391@1|root,COG3391@2|Bacteria,4NSU5@976|Bacteroidetes,2FS0J@200643|Bacteroidia,230NQ@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4221) - - - - - - - - - - - - DUF4221 BECNEDJF_00392 999419.HMPREF1077_01583 0.0 1042.0 COG0029@1|root,COG0029@2|Bacteria,4NGUE@976|Bacteroidetes,2FNMT@200643|Bacteroidia,22WRX@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the oxidation of L-aspartate to iminoaspartate nadB - 1.4.3.16 ko:K00278 ko00250,ko00760,ko01100,map00250,map00760,map01100 M00115 R00357,R00481 RC00006,RC02566 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C BECNEDJF_00393 411477.PARMER_02700 7.45e-167 466.0 28P2C@1|root,32W2C@2|Bacteria,4NSN6@976|Bacteroidetes,2FSPW@200643|Bacteroidia,2318Y@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00394 999419.HMPREF1077_01581 1.45e-93 273.0 2EGMM@1|root,33ADT@2|Bacteria 2|Bacteria S Bacterial PH domain - - - - - - - - - - - - bPH_4 BECNEDJF_00397 411477.PARMER_00620 1.03e-269 744.0 COG1838@1|root,COG1951@1|root,COG1838@2|Bacteria,COG1951@2|Bacteria,4NE85@976|Bacteroidetes,2FNPE@200643|Bacteroidia,22WPF@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reversible hydration of fumarate to (S)- malate fumB - 4.2.1.2 ko:K01676 ko00020,ko00620,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00173,M00374 R01082 RC00443 ko00000,ko00001,ko00002,ko01000 - - - Fumerase,Fumerase_C BECNEDJF_00398 411477.PARMER_00890 2.19e-248 681.0 COG1409@1|root,COG1409@2|Bacteria,4NJT5@976|Bacteroidetes,2G333@200643|Bacteroidia,22Z8K@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - 3.1.3.2 ko:K14379 ko00740,ko01100,ko04142,ko04380,ko05323,map00740,map01100,map04142,map04380,map05323 - R00548 RC00017 ko00000,ko00001,ko01000 - - - Metallophos BECNEDJF_00399 411477.PARMER_00889 0.0 920.0 2C1YQ@1|root,2ZAUF@2|Bacteria,4NI71@976|Bacteroidetes,2FQ0Z@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00400 411477.PARMER_00887 0.0 1803.0 COG1629@1|root,COG4771@2|Bacteria,4NFAM@976|Bacteroidetes,2FPNR@200643|Bacteroidia,22Y08@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3,Plug,TonB_dep_Rec BECNEDJF_00401 411477.PARMER_00886 0.0 879.0 COG2304@1|root,COG2304@2|Bacteria,4NFNQ@976|Bacteroidetes,2FMMK@200643|Bacteroidia,22VUS@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase M64 - - - - - - - - - - - - M64_N,Peptidase_M64 BECNEDJF_00402 411477.PARMER_00885 0.0 999.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 BECNEDJF_00403 411477.PARMER_00884 1.44e-156 453.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - BECNEDJF_00404 411477.PARMER_00574 6.22e-107 308.0 COG1705@1|root,COG1705@2|Bacteria,4NR3X@976|Bacteroidetes,2FY2U@200643|Bacteroidia 976|Bacteroidetes NU Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase - - - ko:K02395 - - - - ko00000,ko02035 - - - Glucosaminidase BECNEDJF_00405 411477.PARMER_00575 2.79e-91 268.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - - BECNEDJF_00407 411477.PARMER_03094 1.35e-83 253.0 COG2253@1|root,COG2253@2|Bacteria,4NPQZ@976|Bacteroidetes,2FNRX@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score - - - - - - - - - - - - AbiEii BECNEDJF_00408 411477.PARMER_03093 1.08e-137 389.0 COG5340@1|root,COG5340@2|Bacteria,4NSQC@976|Bacteroidetes,2FQGU@200643|Bacteroidia 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - AbiEi_4 BECNEDJF_00411 411477.PARMER_03190 7.49e-261 714.0 COG3391@1|root,COG3391@2|Bacteria,4P4JU@976|Bacteroidetes,2FUCS@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4934) - - - - - - - - - - - - DUF5128 BECNEDJF_00413 411477.PARMER_00399 0.0 1935.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00414 411477.PARMER_00398 0.0 1208.0 COG1435@1|root,COG1435@2|Bacteria,4NGX8@976|Bacteroidetes,2FPJC@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00415 411477.PARMER_00397 7.02e-215 593.0 COG1082@1|root,COG1082@2|Bacteria,4P0UK@976|Bacteroidetes 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 BECNEDJF_00416 411477.PARMER_00396 0.0 887.0 COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,2FPMK@200643|Bacteroidia,22WUI@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C BECNEDJF_00417 411477.PARMER_00774 0.0 963.0 COG0443@1|root,COG0443@2|Bacteria,4NERF@976|Bacteroidetes,2FMNH@200643|Bacteroidia,22VY9@171551|Porphyromonadaceae 976|Bacteroidetes O Heat shock 70 kDa protein dnaK - - ko:K04043 ko03018,ko04212,ko05152,map03018,map04212,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 1.A.33.1 - - HSP70 BECNEDJF_00418 411477.PARMER_00773 2.3e-194 538.0 COG0388@1|root,COG0388@2|Bacteria,4NE37@976|Bacteroidetes,2FPG4@200643|Bacteroidia,22XFQ@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase, carbon-nitrogen family ramA_1 - 3.5.1.3 ko:K13566 ko00250,map00250 - R00269,R00348 RC00010 ko00000,ko00001,ko01000 - - - CN_hydrolase BECNEDJF_00419 411477.PARMER_00772 1.19e-135 383.0 COG0204@1|root,COG0204@2|Bacteria,4NNG7@976|Bacteroidetes,2FM7Q@200643|Bacteroidia,22Y0H@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase - - - - - - - - - - - - Acyltransferase BECNEDJF_00420 411477.PARMER_00771 4.49e-60 185.0 2CJP4@1|root,33FB6@2|Bacteria,4NWNA@976|Bacteroidetes,2FUPW@200643|Bacteroidia,22YY0@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23371 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_00421 411477.PARMER_00770 0.0 1117.0 COG0297@1|root,COG0297@2|Bacteria,4PKEP@976|Bacteroidetes,2FNMM@200643|Bacteroidia,22W3T@171551|Porphyromonadaceae 976|Bacteroidetes G starch synthase - - 2.4.1.11 ko:K00693 ko00500,ko01100,ko04151,ko04152,ko04910,ko04922,ko04931,map00500,map01100,map04151,map04152,map04910,map04922,map04931 - R00292 RC00005 ko00000,ko00001,ko01000,ko01003 - GT3 - Glycogen_syn BECNEDJF_00422 411477.PARMER_00769 0.0 1759.0 COG0058@1|root,COG0058@2|Bacteria,4NGR1@976|Bacteroidetes,2FNN5@200643|Bacteroidia,22WPC@171551|Porphyromonadaceae 976|Bacteroidetes G alpha-glucan phosphorylase glgP - 2.4.1.1,2.4.1.11,2.4.1.8 ko:K00688,ko:K00691,ko:K16153 ko00500,ko01100,ko01110,ko02026,ko04217,ko04910,ko04922,ko04931,map00500,map01100,map01110,map02026,map04217,map04910,map04922,map04931 - R00292,R01555,R02111 RC00005,RC00049 ko00000,ko00001,ko01000,ko01003 - GH65,GT3,GT35 - DUF3417,Glycogen_syn,Phosphorylase BECNEDJF_00423 411477.PARMER_00768 1.19e-303 829.0 COG2067@1|root,COG2067@2|Bacteria,4NKM1@976|Bacteroidetes,2FPD4@200643|Bacteroidia,22XAC@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location OuterMembrane, score 9.52 - - - ko:K06076 - - - - ko00000,ko02000 1.B.9 - - OMP_b-brl BECNEDJF_00424 411477.PARMER_00175 3.16e-138 432.0 COG3064@1|root,COG3064@2|Bacteria,4PKSW@976|Bacteroidetes,2G3H6@200643|Bacteroidia,22W8J@171551|Porphyromonadaceae 976|Bacteroidetes M Membrane - - - - - - - - - - - - TPR_16,TPR_6,TPR_8 BECNEDJF_00425 411477.PARMER_00174 0.0 954.0 COG1904@1|root,COG1904@2|Bacteria,4NFHS@976|Bacteroidetes,2FMMW@200643|Bacteroidia,22WQJ@171551|Porphyromonadaceae 976|Bacteroidetes G Glucuronate isomerase uxaC - 5.3.1.12 ko:K01812 ko00040,ko01100,map00040,map01100 M00061,M00631 R01482,R01983 RC00376 ko00000,ko00001,ko00002,ko01000 - - - UxaC BECNEDJF_00426 411477.PARMER_00173 8.42e-163 455.0 COG0800@1|root,COG0800@2|Bacteria,4NEFY@976|Bacteroidetes,2FNWD@200643|Bacteroidia,22WNT@171551|Porphyromonadaceae 976|Bacteroidetes G KDPG and KHG aldolase eda - 4.1.2.14,4.1.3.42 ko:K01625 ko00030,ko00630,ko01100,ko01120,ko01200,map00030,map00630,map01100,map01120,map01200 M00008,M00061,M00308,M00631 R00470,R05605 RC00307,RC00308,RC00435 ko00000,ko00001,ko00002,ko01000 - - - Aldolase BECNEDJF_00427 411477.PARMER_00172 6.1e-255 698.0 COG0524@1|root,COG0524@2|Bacteria,4NFH8@976|Bacteroidetes,2FMY2@200643|Bacteroidia,22X9W@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - 2.7.1.45 ko:K00874 ko00030,ko01100,ko01120,ko01200,map00030,map01100,map01120,map01200 M00061,M00308,M00631 R01541 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - PfkB BECNEDJF_00428 411477.PARMER_00171 0.0 972.0 COG3119@1|root,COG3119@2|Bacteria,4NE7S@976|Bacteroidetes,2FMTS@200643|Bacteroidia 976|Bacteroidetes P COG COG3119 Arylsulfatase A and related enzymes - - 3.1.6.6 ko:K01133 - - - - ko00000,ko01000 - - - DUF4976,Sulfatase BECNEDJF_00429 411477.PARMER_00170 0.0 1741.0 COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,2FMF9@200643|Bacteroidia,22W4V@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 65, N-terminal domain - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 BECNEDJF_00430 411477.PARMER_00169 1.76e-111 335.0 COG1395@1|root,COG1395@2|Bacteria,4NEA1@976|Bacteroidetes,2FP97@200643|Bacteroidia 976|Bacteroidetes K SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00431 411477.PARMER_03271 6.66e-283 772.0 COG0251@1|root,COG0251@2|Bacteria,4NEVA@976|Bacteroidetes,2FN38@200643|Bacteroidia,22X36@171551|Porphyromonadaceae 976|Bacteroidetes J translation initiation inhibitor, yjgF family - - - - - - - - - - - - Ribonuc_L-PSP BECNEDJF_00432 411477.PARMER_03270 1.11e-139 395.0 COG2197@1|root,COG2197@2|Bacteria,4NNVV@976|Bacteroidetes,2FN9B@200643|Bacteroidia,22Y0C@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator, LuxR family - - - - - - - - - - - - GerE BECNEDJF_00433 411477.PARMER_03269 9.79e-168 468.0 COG2846@1|root,COG2846@2|Bacteria,4NMCR@976|Bacteroidetes,2FMRX@200643|Bacteroidia,22XMP@171551|Porphyromonadaceae 976|Bacteroidetes D Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - ko:K07322 - - - - ko00000 - - - Hemerythrin BECNEDJF_00434 411477.PARMER_03268 7.22e-284 775.0 COG0251@1|root,COG0251@2|Bacteria,4NEVA@976|Bacteroidetes,2FN38@200643|Bacteroidia,22X36@171551|Porphyromonadaceae 976|Bacteroidetes J translation initiation inhibitor, yjgF family - - - - - - - - - - - - Ribonuc_L-PSP BECNEDJF_00435 411477.PARMER_03267 2.4e-169 473.0 2B7EF@1|root,320I7@2|Bacteria,4NRYF@976|Bacteroidetes,2FQTT@200643|Bacteroidia,22YRP@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00436 411477.PARMER_03266 1.89e-296 808.0 COG3746@1|root,COG3746@2|Bacteria,4NI6X@976|Bacteroidetes,2FPGI@200643|Bacteroidia,22X0Z@171551|Porphyromonadaceae 976|Bacteroidetes P Phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P BECNEDJF_00437 411477.PARMER_03265 0.0 982.0 COG3488@1|root,COG3488@2|Bacteria,4NGBS@976|Bacteroidetes,2FNKM@200643|Bacteroidia,22W7J@171551|Porphyromonadaceae 976|Bacteroidetes C Di-haem oxidoreductase, putative peroxidase - - - - - - - - - - - - DHOR BECNEDJF_00439 411477.PARMER_03264 1.97e-316 860.0 COG3489@1|root,COG3489@2|Bacteria,4NGCP@976|Bacteroidetes,2G2XV@200643|Bacteroidia,22Y5N@171551|Porphyromonadaceae 976|Bacteroidetes S Imelysin - - - - - - - - - - - - Peptidase_M75 BECNEDJF_00440 999419.HMPREF1077_02136 2.19e-143 413.0 COG2433@1|root,COG2433@2|Bacteria,4PKWF@976|Bacteroidetes,2G069@200643|Bacteroidia,22XD0@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location OuterMembrane, score - - - - - - - - - - - - Porin_O_P BECNEDJF_00441 411477.PARMER_01381 0.0 1427.0 COG0480@1|root,COG0480@2|Bacteria,4NG4H@976|Bacteroidetes,2FN1G@200643|Bacteroidia,22VW0@171551|Porphyromonadaceae 976|Bacteroidetes J elongation factor G fusA2 - - ko:K02355 - - - - ko00000,ko03012,ko03029 - - - EFG_C,EFG_II,EFG_IV,GTP_EFTU,GTP_EFTU_D2 BECNEDJF_00442 411477.PARMER_01382 5.42e-257 705.0 COG0635@1|root,COG0635@2|Bacteria,4NFEE@976|Bacteroidetes,2FPFC@200643|Bacteroidia,22VY4@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the biosynthesis of porphyrin-containing compound hemN - - - - - - - - - - - HemN_C,Radical_SAM BECNEDJF_00443 999419.HMPREF1077_00400 6.28e-136 384.0 COG4185@1|root,COG4185@2|Bacteria,4NNKA@976|Bacteroidetes,2FQ6Z@200643|Bacteroidia,22Y15@171551|Porphyromonadaceae 976|Bacteroidetes S Zeta toxin - - - - - - - - - - - - Zeta_toxin BECNEDJF_00444 411477.PARMER_01384 3.6e-31 109.0 28XP8@1|root,2ZJK4@2|Bacteria,4P8M7@976|Bacteroidetes,2FZD5@200643|Bacteroidia,2311C@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00447 411477.PARMER_01389 4.15e-282 769.0 COG2017@1|root,COG2017@2|Bacteria,4NF5G@976|Bacteroidetes,2FMMZ@200643|Bacteroidia,22X1S@171551|Porphyromonadaceae 976|Bacteroidetes G Converts alpha-aldose to the beta-anomer galM - 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 - - - Aldose_epim,Glyco_hydro_43 BECNEDJF_00448 411477.PARMER_01390 4.21e-202 558.0 COG0207@1|root,COG0207@2|Bacteria,4NEC2@976|Bacteroidetes,2FM46@200643|Bacteroidia,22W2J@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis thyA - 2.1.1.45 ko:K00560 ko00240,ko00670,ko01100,ko01523,map00240,map00670,map01100,map01523 M00053 R02101 RC00219,RC00332 ko00000,ko00001,ko00002,ko01000 - - - Thymidylat_synt BECNEDJF_00449 411477.PARMER_01391 1.41e-122 348.0 COG0262@1|root,COG0262@2|Bacteria,4NQ2Y@976|Bacteroidetes,2FT42@200643|Bacteroidia,22Y3Q@171551|Porphyromonadaceae 976|Bacteroidetes H Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis folA - 1.5.1.3 ko:K00287 ko00670,ko00790,ko01100,ko01523,map00670,map00790,map01100,map01523 M00126,M00840 R00936,R00937,R00939,R00940,R02235,R02236,R11765 RC00109,RC00110,RC00158 ko00000,ko00001,ko00002,ko01000 - - - 2TM,DHFR_1 BECNEDJF_00450 411477.PARMER_00019 2.07e-67 209.0 COG0711@1|root,COG0711@2|Bacteria,4NQKA@976|Bacteroidetes,2FQWH@200643|Bacteroidia,22Y51@171551|Porphyromonadaceae 976|Bacteroidetes C Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0) atpF - - ko:K02109 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_B BECNEDJF_00451 411477.PARMER_00020 2.87e-29 106.0 COG0636@1|root,COG0636@2|Bacteria,4NURW@976|Bacteroidetes,2FTSZ@200643|Bacteroidia,22YE5@171551|Porphyromonadaceae 976|Bacteroidetes C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpE GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006753,GO:0006754,GO:0006793,GO:0006796,GO:0006807,GO:0006810,GO:0006811,GO:0006812,GO:0008150,GO:0008152,GO:0008324,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015985,GO:0015986,GO:0016020,GO:0016462,GO:0016469,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0032991,GO:0033177,GO:0034220,GO:0034641,GO:0034654,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044425,GO:0044464,GO:0044769,GO:0045259,GO:0045263,GO:0046034,GO:0046390,GO:0046483,GO:0046933,GO:0051179,GO:0051234,GO:0055085,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0098796,GO:0099131,GO:0099132,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1902600 - ko:K02110 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_C BECNEDJF_00452 411477.PARMER_00021 3.14e-255 699.0 COG0356@1|root,COG0356@2|Bacteria,4NEPK@976|Bacteroidetes,2FNAB@200643|Bacteroidia,22VYZ@171551|Porphyromonadaceae 976|Bacteroidetes C it plays a direct role in the translocation of protons across the membrane atpB - - ko:K02108 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko03110 3.A.2.1 - - ATP-synt_A BECNEDJF_00453 411477.PARMER_00022 9.37e-96 279.0 2EK6R@1|root,33DX4@2|Bacteria,4NY14@976|Bacteroidetes,2FVRA@200643|Bacteroidia,22YXH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - BECNEDJF_00454 411477.PARMER_00023 4.58e-48 153.0 COG0355@1|root,COG0355@2|Bacteria,4NUYG@976|Bacteroidetes,2FUIM@200643|Bacteroidia,22YYA@171551|Porphyromonadaceae 976|Bacteroidetes C ATP synthase atpC - - ko:K02114 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt_DE_N BECNEDJF_00455 411477.PARMER_00024 0.0 978.0 COG0055@1|root,COG0055@2|Bacteria,4NF1Q@976|Bacteroidetes,2FP0J@200643|Bacteroidia,22W4U@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits atpD - 3.6.3.14 ko:K02112 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_N BECNEDJF_00456 411477.PARMER_00026 0.0 1364.0 COG4206@1|root,COG4206@2|Bacteria,4NED9@976|Bacteroidetes,2FNSZ@200643|Bacteroidia,22WUA@171551|Porphyromonadaceae 976|Bacteroidetes H TonB-dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec BECNEDJF_00457 411477.PARMER_00027 1.36e-265 726.0 COG3391@1|root,COG3391@2|Bacteria,4NESV@976|Bacteroidetes,2G2ND@200643|Bacteroidia,22YAZ@171551|Porphyromonadaceae 976|Bacteroidetes S amine dehydrogenase activity - - - - - - - - - - - - - BECNEDJF_00460 411477.PARMER_02697 1.17e-246 677.0 COG2768@1|root,COG2768@2|Bacteria,4NGYC@976|Bacteroidetes,2FPAI@200643|Bacteroidia,22X1P@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of unknown function (DUF362) - - - ko:K07138 - - - - ko00000 - - - DUF362 BECNEDJF_00461 411477.PARMER_02236 0.0 1596.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMXD@200643|Bacteroidia,22WP0@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_00462 411477.PARMER_02237 8.14e-265 727.0 COG1538@1|root,COG1538@2|Bacteria,4NIE8@976|Bacteroidetes,2FNS5@200643|Bacteroidia,22X81@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_00463 411477.PARMER_02238 0.0 1889.0 COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FMH3@200643|Bacteroidia,22VYK@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family czcA - - ko:K07787 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4 - - ACR_tran BECNEDJF_00464 411477.PARMER_02239 4.44e-259 714.0 COG0845@1|root,COG0845@2|Bacteria,4NF6Y@976|Bacteroidetes,2FMZD@200643|Bacteroidia,22X56@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_3,HlyD_D23 BECNEDJF_00465 411477.PARMER_02241 2.45e-81 242.0 2BXNV@1|root,2ZTIF@2|Bacteria,4P8CS@976|Bacteroidetes,2G1RS@200643|Bacteroidia,2314W@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG32090 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_00466 411477.PARMER_03788 8.55e-248 684.0 COG0144@1|root,COG3270@1|root,COG0144@2|Bacteria,COG3270@2|Bacteria,4NEV7@976|Bacteroidetes,2FKZX@200643|Bacteroidia,22WT9@171551|Porphyromonadaceae 976|Bacteroidetes J NOL1 NOP2 sun family rsmF - - - - - - - - - - - Methyltr_RsmB-F,Methyltr_RsmF_N,Methyltranf_PUA BECNEDJF_00468 411477.PARMER_03785 0.0 1190.0 COG3591@1|root,COG3591@2|Bacteria,4NG2K@976|Bacteroidetes,2FRA2@200643|Bacteroidia,22Z8D@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the peptidase S1B family - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - Trypsin_2 BECNEDJF_00469 411477.PARMER_03784 6.25e-246 674.0 COG0322@1|root,COG0322@2|Bacteria,4NGEV@976|Bacteroidetes,2FNVF@200643|Bacteroidia,22XZM@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF4837) - - - - - - - - - - - - DUF4837 BECNEDJF_00470 411477.PARMER_03783 1.5e-151 426.0 COG0457@1|root,COG0457@2|Bacteria,4PIXP@976|Bacteroidetes,2FXS6@200643|Bacteroidia 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - - BECNEDJF_00471 411477.PARMER_03782 0.0 1368.0 COG0855@1|root,COG0855@2|Bacteria,4NE3P@976|Bacteroidetes,2FM68@200643|Bacteroidia,22WZE@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) ppk - 2.7.4.1 ko:K00937 ko00190,ko03018,map00190,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - PP_kinase,PP_kinase_C,PP_kinase_N BECNEDJF_00472 411477.PARMER_03781 1.95e-119 340.0 COG0622@1|root,COG0622@2|Bacteria,4NM4G@976|Bacteroidetes,2FSMW@200643|Bacteroidia,22XUV@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphoesterase - - - ko:K07095 - - - - ko00000 - - - Metallophos_2 BECNEDJF_00473 411477.PARMER_03780 6.45e-195 545.0 COG1443@1|root,COG1443@2|Bacteria,4NMW4@976|Bacteroidetes,2FPR6@200643|Bacteroidia,22Y56@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - BECNEDJF_00474 411477.PARMER_01745 7.92e-178 521.0 COG0612@1|root,COG0612@2|Bacteria,4NDXM@976|Bacteroidetes,2FNQC@200643|Bacteroidia,22WU8@171551|Porphyromonadaceae 976|Bacteroidetes S Insulinase (Peptidase family M16) - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C BECNEDJF_00475 411477.PARMER_03709 0.0 1922.0 COG0612@1|root,COG0612@2|Bacteria,4NDXM@976|Bacteroidetes,2FNQC@200643|Bacteroidia,22X8M@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the peptidase M16 family - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C BECNEDJF_00476 411477.PARMER_03708 5e-311 847.0 COG0192@1|root,COG0192@2|Bacteria,4NG7Y@976|Bacteroidetes,2FNW8@200643|Bacteroidia,22WZI@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme metK - 2.5.1.6 ko:K00789 ko00270,ko01100,ko01110,ko01230,map00270,map01100,map01110,map01230 M00034,M00035,M00368,M00609 R00177,R04771 RC00021,RC01211 ko00000,ko00001,ko00002,ko01000 - - - S-AdoMet_synt_C,S-AdoMet_synt_M,S-AdoMet_synt_N BECNEDJF_00477 272559.BF9343_1313 0.000133 42.7 2ET3M@1|root,33KMT@2|Bacteria,4NZ74@976|Bacteroidetes,2FUM5@200643|Bacteroidia,4AS6V@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00478 411477.PARMER_03705 1.64e-103 299.0 COG0801@1|root,COG0801@2|Bacteria,4NGE8@976|Bacteroidetes,2FSKM@200643|Bacteroidia,22Y7A@171551|Porphyromonadaceae 976|Bacteroidetes H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK - 2.7.6.3 ko:K00950 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HPPK,dNK BECNEDJF_00479 411477.PARMER_03704 8.68e-256 701.0 COG0809@1|root,COG0809@2|Bacteria,4NF2T@976|Bacteroidetes,2FMFT@200643|Bacteroidia,22WR2@171551|Porphyromonadaceae 976|Bacteroidetes J Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA - 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth BECNEDJF_00480 411477.PARMER_03703 1.1e-165 463.0 COG0130@1|root,COG0130@2|Bacteria,4NESK@976|Bacteroidetes,2FMTY@200643|Bacteroidia,22X2S@171551|Porphyromonadaceae 976|Bacteroidetes J Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs truB GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016556,GO:0016853,GO:0016866,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1990481 5.4.99.25 ko:K03177 - - - - ko00000,ko01000,ko03016 - - - TruB_C_2,TruB_N BECNEDJF_00481 411477.PARMER_03702 6.56e-182 507.0 COG1968@1|root,COG1968@2|Bacteria,4NGIZ@976|Bacteroidetes,2FMST@200643|Bacteroidia,22X3R@171551|Porphyromonadaceae 976|Bacteroidetes V Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin uppP - 3.6.1.27 ko:K06153 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - BacA BECNEDJF_00482 411477.PARMER_03701 2.26e-49 157.0 2E6VD@1|root,331EZ@2|Bacteria,4NUSW@976|Bacteroidetes,2FTVZ@200643|Bacteroidia,22YMK@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3098) fjo13 - - - - - - - - - - - DUF3098 BECNEDJF_00483 411477.PARMER_03700 1.51e-184 516.0 COG2177@1|root,COG2177@2|Bacteria,4NH05@976|Bacteroidetes,2FM17@200643|Bacteroidia,22WWC@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the ABC-4 integral membrane protein family. FtsX subfamily ftsX GO:0005575,GO:0005618,GO:0005623,GO:0006928,GO:0008150,GO:0009274,GO:0009276,GO:0009605,GO:0009607,GO:0009615,GO:0009987,GO:0030312,GO:0030313,GO:0031975,GO:0040011,GO:0043207,GO:0044464,GO:0048870,GO:0050896,GO:0051179,GO:0051301,GO:0051674,GO:0051704,GO:0051707,GO:0071944,GO:0071976 - ko:K09811 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - FtsX BECNEDJF_00486 411477.PARMER_02825 4.72e-72 216.0 COG2361@1|root,COG2361@2|Bacteria,4NZQ7@976|Bacteroidetes,2FV50@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 BECNEDJF_00487 411477.PARMER_02824 8.5e-208 574.0 2E380@1|root,32Y7Q@2|Bacteria,4NN04@976|Bacteroidetes,2FM58@200643|Bacteroidia,22YHN@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (Porph_ging) - - - - - - - - - - - - Porph_ging BECNEDJF_00488 411477.PARMER_02823 0.0 1659.0 COG1629@1|root,COG1629@2|Bacteria,4NF6X@976|Bacteroidetes,2FPI0@200643|Bacteroidia,22WGP@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg BECNEDJF_00490 411477.PARMER_02821 5.31e-206 569.0 2EZ6Z@1|root,33SCY@2|Bacteria,4P10J@976|Bacteroidetes,2FNYE@200643|Bacteroidia 976|Bacteroidetes S COG NOG24904 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_00491 411477.PARMER_02820 4.8e-275 751.0 COG0111@1|root,COG0111@2|Bacteria,4NGEB@976|Bacteroidetes,2FMMV@200643|Bacteroidia,22X0T@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate pdxB - 1.1.1.290 ko:K03473 ko00750,ko01100,map00750,map01100 M00124 R04210 RC00084 ko00000,ko00001,ko00002,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C,DUF3410 BECNEDJF_00492 999419.HMPREF1077_00214 3.73e-127 390.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22W07@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00493 411477.PARMER_03710 5.87e-183 509.0 COG1127@1|root,COG1127@2|Bacteria,4NETG@976|Bacteroidetes,2FM5W@200643|Bacteroidia,22X10@171551|Porphyromonadaceae 976|Bacteroidetes Q ABC transporter, ATP-binding protein metN - - ko:K02065 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - ABC_tran BECNEDJF_00494 999419.HMPREF1077_02213 1.4e-71 233.0 COG1554@1|root,COG1554@2|Bacteria,4NFYU@976|Bacteroidetes,2FPE9@200643|Bacteroidia,22ZAF@171551|Porphyromonadaceae 976|Bacteroidetes G COG NOG26513 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_00497 585543.HMPREF0969_01154 4.11e-83 259.0 COG2509@1|root,COG2509@2|Bacteria,4NEUQ@976|Bacteroidetes,2FM1G@200643|Bacteroidia,4AKDA@815|Bacteroidaceae 976|Bacteroidetes S FAD-dependent - - - ko:K07137 - - - - ko00000 - - - FAD_binding_2,FAD_binding_3,GIDA,HI0933_like,Pyr_redox_2 BECNEDJF_00498 411477.PARMER_03222 2.56e-234 646.0 COG3712@1|root,COG3712@2|Bacteria,4NR47@976|Bacteroidetes,2FWBG@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_00503 411477.PARMER_02247 1.79e-214 592.0 COG0667@1|root,COG0667@2|Bacteria,4NP8D@976|Bacteroidetes,2FTGW@200643|Bacteroidia,231TR@171551|Porphyromonadaceae 976|Bacteroidetes C Aldo/keto reductase family - - - - - - - - - - - - Aldo_ket_red BECNEDJF_00504 411477.PARMER_02248 0.0 866.0 COG3004@1|root,COG3004@2|Bacteria,4NFC4@976|Bacteroidetes,2FMP4@200643|Bacteroidia,22W9P@171551|Porphyromonadaceae 976|Bacteroidetes P Na( ) H( ) antiporter that extrudes sodium in exchange for external protons nhaA - - ko:K03313 - - - - ko00000,ko02000 2.A.33.1 - - Na_H_antiport_1 BECNEDJF_00505 999419.HMPREF1077_03254 6.71e-266 730.0 COG0475@1|root,COG0475@2|Bacteria,4NGFZ@976|Bacteroidetes,2FNHH@200643|Bacteroidia,22XGX@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - Na_H_Exchanger BECNEDJF_00506 411477.PARMER_02250 7.83e-140 395.0 COG1739@1|root,COG1739@2|Bacteria,4NF0D@976|Bacteroidetes,2FQHX@200643|Bacteroidia,22WR7@171551|Porphyromonadaceae 976|Bacteroidetes S YigZ family yigZ - - - - - - - - - - - UPF0029 BECNEDJF_00507 411477.PARMER_02251 1.75e-47 151.0 2FBRV@1|root,343WN@2|Bacteria,4P5W1@976|Bacteroidetes,2FUF0@200643|Bacteroidia,230YW@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00508 411477.PARMER_02252 6.3e-220 631.0 COG0178@1|root,COG0178@2|Bacteria,4NFQU@976|Bacteroidetes,2FNMG@200643|Bacteroidia,22W2F@171551|Porphyromonadaceae 976|Bacteroidetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate uvrA2 - - ko:K03701 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - ABC_tran BECNEDJF_00509 411477.PARMER_03944 3.17e-283 796.0 COG2605@1|root,COG2605@2|Bacteria,4NHF2@976|Bacteroidetes,2FMWG@200643|Bacteroidia,22VW1@171551|Porphyromonadaceae 976|Bacteroidetes S L-fucokinase fkp - - - - - - - - - - - Fucokinase,GHMP_kinases_C,GHMP_kinases_N BECNEDJF_00510 999419.HMPREF1077_01683 4.14e-57 189.0 COG0477@1|root,COG2814@2|Bacteria,4NE09@976|Bacteroidetes,2G07R@200643|Bacteroidia,22WT4@171551|Porphyromonadaceae 976|Bacteroidetes EGP Sugar (and other) transporter xylE - - ko:K02100,ko:K03444,ko:K08138 - - - - ko00000,ko02000 2.A.1.1,2.A.1.1.2,2.A.1.1.3 - - Sugar_tr BECNEDJF_00511 999419.HMPREF1077_01683 2.35e-229 638.0 COG0477@1|root,COG2814@2|Bacteria,4NE09@976|Bacteroidetes,2G07R@200643|Bacteroidia,22WT4@171551|Porphyromonadaceae 976|Bacteroidetes EGP Sugar (and other) transporter xylE - - ko:K02100,ko:K03444,ko:K08138 - - - - ko00000,ko02000 2.A.1.1,2.A.1.1.2,2.A.1.1.3 - - Sugar_tr BECNEDJF_00512 999419.HMPREF1077_01682 6.52e-217 598.0 COG2207@1|root,COG2207@2|Bacteria,4NGS3@976|Bacteroidetes,2FMQ2@200643|Bacteroidia,22WJF@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18,HTH_AraC BECNEDJF_00513 1122931.AUAE01000007_gene1157 0.0 1120.0 COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,2FPZV@200643|Bacteroidia,22ZMJ@171551|Porphyromonadaceae 976|Bacteroidetes G Galactose mutarotase-like - - 3.2.1.177 ko:K01811 - - - - ko00000,ko01000 - GH31 - DUF4968,DUF5110,Gal_mutarotas_2,Glyco_hydro_31 BECNEDJF_00514 411477.PARMER_00293 0.0 1102.0 COG3119@1|root,COG3119@2|Bacteria,4NHH7@976|Bacteroidetes,2FPC0@200643|Bacteroidia,23030@171551|Porphyromonadaceae 976|Bacteroidetes P Domain of unknown function (DUF4976) - - - - - - - - - - - - DUF4976,Sulfatase BECNEDJF_00515 411477.PARMER_00295 0.0 1393.0 COG1629@1|root,COG4771@2|Bacteria,4NJPB@976|Bacteroidetes,2FMKA@200643|Bacteroidia 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - CarbopepD_reg_2 BECNEDJF_00516 411477.PARMER_03827 2.42e-193 535.0 28J3W@1|root,2Z900@2|Bacteria,4NG4R@976|Bacteroidetes,2FY4J@200643|Bacteroidia 976|Bacteroidetes S NIPSNAP - - - - - - - - - - - - NIPSNAP BECNEDJF_00517 1122931.AUAE01000037_gene1083 1.05e-65 224.0 COG1572@1|root,COG1572@2|Bacteria,4NDY7@976|Bacteroidetes,2FMIV@200643|Bacteroidia,22WVT@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family C25 porU - - - - - - - - - - - Peptidase_C25 BECNEDJF_00519 411477.PARMER_02273 1.16e-239 658.0 COG0667@1|root,COG0667@2|Bacteria,4NFCN@976|Bacteroidetes,2FMAG@200643|Bacteroidia,22W5H@171551|Porphyromonadaceae 976|Bacteroidetes C Aldo/keto reductase family gpr - - ko:K19265 - - - - ko00000,ko01000 - - - Aldo_ket_red BECNEDJF_00520 411477.PARMER_02275 0.0 1911.0 COG2887@1|root,COG3893@1|root,COG2887@2|Bacteria,COG3893@2|Bacteria,4NFZQ@976|Bacteroidetes,2FN03@200643|Bacteroidia,22W74@171551|Porphyromonadaceae 976|Bacteroidetes L PD-(D/E)XK nuclease superfamily - - - - - - - - - - - - PDDEXK_1 BECNEDJF_00521 411477.PARMER_02276 3.89e-167 466.0 COG5587@1|root,COG5587@2|Bacteria,4NNS3@976|Bacteroidetes,2FPZZ@200643|Bacteroidia,22XWU@171551|Porphyromonadaceae 976|Bacteroidetes S Conserved hypothetical protein (DUF2461) - - - - - - - - - - - - DUF2461 BECNEDJF_00522 411477.PARMER_02277 5.57e-215 592.0 COG2207@1|root,COG2207@2|Bacteria,4NE6T@976|Bacteroidetes,2FT6Q@200643|Bacteroidia,231T6@171551|Porphyromonadaceae 976|Bacteroidetes K Cupin domain - - - - - - - - - - - - Cupin_2,HTH_18 BECNEDJF_00523 999419.HMPREF1077_01319 2.04e-270 741.0 COG0477@1|root,COG2814@2|Bacteria,4NESW@976|Bacteroidetes,2FM8C@200643|Bacteroidia,22XA6@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily araJ - - ko:K08156 - - - - ko00000,ko02000 2.A.1.2.14 - - MFS_1,Sugar_tr BECNEDJF_00527 411477.PARMER_02922 5.38e-213 589.0 COG1575@1|root,COG1575@2|Bacteria,4NGCJ@976|Bacteroidetes,2FMMX@200643|Bacteroidia,22XUQ@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the MenA family. Type 1 subfamily menA - 2.5.1.74 ko:K02548 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R05617,R06858,R10757 RC02935,RC02936,RC03264 ko00000,ko00001,ko00002,ko01000,ko01006 - - - UbiA BECNEDJF_00528 411477.PARMER_02924 1.5e-206 573.0 COG0697@1|root,COG0697@2|Bacteria,4NK8U@976|Bacteroidetes,2FNMF@200643|Bacteroidia,22X8B@171551|Porphyromonadaceae 976|Bacteroidetes EG Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - EamA BECNEDJF_00530 411477.PARMER_02925 4.99e-119 341.0 COG0693@1|root,COG0693@2|Bacteria,4NPUE@976|Bacteroidetes,2FMXF@200643|Bacteroidia,22Y7F@171551|Porphyromonadaceae 976|Bacteroidetes S biosynthesis protein ThiJ thiJ - 3.5.1.124 ko:K03152 - - - - ko00000,ko01000,ko01002 - - - DJ-1_PfpI BECNEDJF_00531 411477.PARMER_02926 5.12e-142 407.0 COG0810@1|root,COG0810@2|Bacteria,4NG4I@976|Bacteroidetes,2FM9A@200643|Bacteroidia 976|Bacteroidetes M TonB family domain protein - - - - - - - - - - - - TonB_C BECNEDJF_00532 411477.PARMER_02927 1.71e-86 255.0 COG0848@1|root,COG0848@2|Bacteria,4NNI6@976|Bacteroidetes,2FRY4@200643|Bacteroidia,22Y92@171551|Porphyromonadaceae 976|Bacteroidetes U Biopolymer transporter ExbD - - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD BECNEDJF_00533 411477.PARMER_02928 2.28e-158 445.0 COG0811@1|root,COG0811@2|Bacteria,4NFIX@976|Bacteroidetes,2FNG0@200643|Bacteroidia,22WUN@171551|Porphyromonadaceae 976|Bacteroidetes U Transporter, MotA TolQ ExbB proton channel family protein exbB - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB BECNEDJF_00534 411477.PARMER_02929 1.45e-171 478.0 COG0854@1|root,COG0854@2|Bacteria,4NF4Z@976|Bacteroidetes,2FM21@200643|Bacteroidia,22WZG@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate pdxJ GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0008614,GO:0008615,GO:0009058,GO:0009110,GO:0009987,GO:0016740,GO:0016769,GO:0017144,GO:0018130,GO:0019438,GO:0033856,GO:0034641,GO:0042364,GO:0042816,GO:0042819,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0051186,GO:0051188,GO:0071704,GO:0072524,GO:0072525,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 2.6.99.2 ko:K03474 ko00750,ko01100,map00750,map01100 M00124 R05838 RC01476 ko00000,ko00001,ko00002,ko01000 - - - PdxJ BECNEDJF_00535 411477.PARMER_02930 3.84e-153 430.0 COG0517@1|root,COG0517@2|Bacteria,4NF8G@976|Bacteroidetes,2FT2B@200643|Bacteroidia,22YSH@171551|Porphyromonadaceae 976|Bacteroidetes S CBS domain - - - - - - - - - - - - CBS BECNEDJF_00536 411477.PARMER_01916 6.63e-80 237.0 COG2246@1|root,COG2246@2|Bacteria,4NVF9@976|Bacteroidetes,2FSJT@200643|Bacteroidia,231R3@171551|Porphyromonadaceae 976|Bacteroidetes S GtrA-like protein - - - - - - - - - - - - GtrA BECNEDJF_00537 411477.PARMER_01917 5.22e-131 371.0 COG0526@1|root,COG0526@2|Bacteria,4NW7T@976|Bacteroidetes,2FTAZ@200643|Bacteroidia 976|Bacteroidetes CO Antioxidant, AhpC TSA family - - - - - - - - - - - - AhpC-TSA,Redoxin BECNEDJF_00538 411477.PARMER_00180 1.37e-184 516.0 COG4225@1|root,COG4225@2|Bacteria,4NHK7@976|Bacteroidetes,2FPVZ@200643|Bacteroidia,22XE1@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 BECNEDJF_00539 1002367.HMPREF0673_01155 2.48e-21 89.0 2DTVA@1|root,33MTI@2|Bacteria,4PAQR@976|Bacteroidetes,2FXHZ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00541 411477.PARMER_00327 0.0 1290.0 COG3525@1|root,COG3525@2|Bacteria,4NF9Z@976|Bacteroidetes,2FP2G@200643|Bacteroidia,22XDY@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain protein - - - - - - - - - - - - Glyco_hydro_20,Glyco_hydro_20b BECNEDJF_00542 411477.PARMER_00328 0.0 2169.0 COG2755@1|root,COG3055@1|root,COG2755@2|Bacteria,COG3055@2|Bacteria,4NK31@976|Bacteroidetes,2G3HM@200643|Bacteroidia,22VZS@171551|Porphyromonadaceae 976|Bacteroidetes E Carbohydrate esterase, sialic acid-specific acetylesterase estS - 3.1.1.53 ko:K05970 - - - - ko00000,ko01000 - - - Lipase_GDSL_2,SASA BECNEDJF_00543 411477.PARMER_00329 3.75e-141 398.0 COG1611@1|root,COG1611@2|Bacteria,4NGWU@976|Bacteroidetes,2FNYZ@200643|Bacteroidia,22XPU@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the LOG family yvdD - 3.2.2.10 ko:K06966 ko00230,ko00240,map00230,map00240 - R00182,R00510 RC00063,RC00318 ko00000,ko00001,ko01000 - - - Lysine_decarbox BECNEDJF_00544 411477.PARMER_00330 6.95e-188 520.0 COG0177@1|root,COG0177@2|Bacteria,4NE7K@976|Bacteroidetes,2FMKR@200643|Bacteroidia,22YCK@171551|Porphyromonadaceae 976|Bacteroidetes L Protein of unknown function (DUF2400) - - - - - - - - - - - - DUF2400 BECNEDJF_00545 411477.PARMER_00331 4.67e-171 477.0 COG4912@1|root,COG4912@2|Bacteria,4NKBS@976|Bacteroidetes,2FM3U@200643|Bacteroidia,22XNZ@171551|Porphyromonadaceae 976|Bacteroidetes L DNA alkylation repair - - - - - - - - - - - - DNA_alkylation BECNEDJF_00546 411477.PARMER_00332 1.75e-229 632.0 COG1052@1|root,COG1052@2|Bacteria,4PKE3@976|Bacteroidetes,2G31I@200643|Bacteroidia,22WVY@171551|Porphyromonadaceae 976|Bacteroidetes CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family - - 1.1.1.26 ko:K00015 ko00630,ko01100,ko01110,ko01120,map00630,map01100,map01110,map01120 - R00717,R01388 RC00031,RC00042 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C BECNEDJF_00547 411477.PARMER_00333 4.83e-90 268.0 COG0657@1|root,COG0657@2|Bacteria,4NHDX@976|Bacteroidetes,2FP2B@200643|Bacteroidia,22VVK@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxylesterase family - - - - - - - - - - - - Abhydrolase_3,COesterase BECNEDJF_00549 411477.PARMER_02481 0.0 2375.0 COG0674@1|root,COG1013@1|root,COG1014@1|root,COG1143@1|root,COG0674@2|Bacteria,COG1013@2|Bacteria,COG1014@2|Bacteria,COG1143@2|Bacteria,4NF4F@976|Bacteroidetes,2FKZU@200643|Bacteroidia,22WF0@171551|Porphyromonadaceae 976|Bacteroidetes C Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin nifJ - 1.2.7.1 ko:K03737 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00173,M00307 R01196,R10866 RC00004,RC02742 br01601,ko00000,ko00001,ko00002,ko01000 - - - EKR,Fer4_16,Fer4_7,PFOR_II,POR,POR_N,TPP_enzyme_C BECNEDJF_00550 999419.HMPREF1077_02569 1.35e-275 754.0 COG1373@1|root,COG1373@2|Bacteria,4NE3E@976|Bacteroidetes,2FQ28@200643|Bacteroidia,22W5Q@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase (AAA - - - ko:K07133 - - - - ko00000 - - - AAA_14 BECNEDJF_00551 411477.PARMER_02478 3.65e-252 691.0 COG0115@1|root,COG0115@2|Bacteria,4NEJY@976|Bacteroidetes,2FMPE@200643|Bacteroidia,22XCN@171551|Porphyromonadaceae 976|Bacteroidetes EH Branched-chain amino acid aminotransferase ilvE - 2.6.1.42 ko:K00826 ko00270,ko00280,ko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00270,map00280,map00290,map00770,map01100,map01110,map01130,map01210,map01230 M00019,M00036,M00119,M00570 R01090,R01214,R02199,R10991 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_4 BECNEDJF_00552 411477.PARMER_02476 4e-233 640.0 COG0685@1|root,COG0685@2|Bacteria,4NDY0@976|Bacteroidetes,2FMPC@200643|Bacteroidia,22X3N@171551|Porphyromonadaceae 976|Bacteroidetes C Methylenetetrahydrofolate reductase metF - 1.5.1.20 ko:K00297 ko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523 M00377 R01224,R07168 RC00081 ko00000,ko00001,ko00002,ko01000 - - - MTHFR BECNEDJF_00553 411477.PARMER_02475 2.57e-86 262.0 COG0252@1|root,COG0252@2|Bacteria,4NE2Z@976|Bacteroidetes,2FM3E@200643|Bacteroidia,22VV2@171551|Porphyromonadaceae 976|Bacteroidetes EJ L-asparaginase, type I ansA - 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 - R00485 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Asparaginase BECNEDJF_00554 411477.PARMER_01665 1.4e-93 278.0 2DX7F@1|root,343QT@2|Bacteria,4P6PI@976|Bacteroidetes,2FSXP@200643|Bacteroidia 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 BECNEDJF_00556 411477.PARMER_01488 4.14e-163 479.0 COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia,22XI8@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug BECNEDJF_00557 411477.PARMER_02943 6.22e-221 614.0 COG0842@1|root,COG0842@2|Bacteria,4NJWT@976|Bacteroidetes,2FP7Q@200643|Bacteroidia,22WS8@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 BECNEDJF_00558 411477.PARMER_02946 0.0 1453.0 COG3591@1|root,COG3591@2|Bacteria,4NEAK@976|Bacteroidetes,2FMI1@200643|Bacteroidia,22X40@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase S46 dpp11 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005576,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008238,GO:0008239,GO:0009056,GO:0009986,GO:0009987,GO:0016049,GO:0016787,GO:0019538,GO:0030154,GO:0032502,GO:0033218,GO:0034641,GO:0040007,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044464,GO:0048468,GO:0048588,GO:0048589,GO:0048856,GO:0048869,GO:0070011,GO:0071704,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - Peptidase_S46 BECNEDJF_00559 411477.PARMER_02947 5.04e-114 326.0 COG2954@1|root,COG2954@2|Bacteria,4NNGE@976|Bacteroidetes,2FNH1@200643|Bacteroidia,22XW0@171551|Porphyromonadaceae 976|Bacteroidetes S Adenylate cyclase cyaA - 4.6.1.1 ko:K01768 ko00230,ko02025,ko04113,ko04213,map00230,map02025,map04113,map04213 M00695 R00089,R00434 RC00295 ko00000,ko00001,ko00002,ko01000 - - - CYTH BECNEDJF_00560 411477.PARMER_02948 2.37e-251 690.0 COG1193@1|root,COG1193@2|Bacteria,4NNNV@976|Bacteroidetes,2FMM1@200643|Bacteroidia,22VWU@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF2027) - - - - - - - - - - - - DUF2027,Smr BECNEDJF_00561 411477.PARMER_02950 2.4e-119 341.0 COG3153@1|root,COG3153@2|Bacteria,4NP1G@976|Bacteroidetes,2FNXX@200643|Bacteroidia,22YGC@171551|Porphyromonadaceae 976|Bacteroidetes S Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_9,Zn_ribbon_2 BECNEDJF_00562 411477.PARMER_02951 7.11e-315 857.0 COG0809@1|root,COG0809@2|Bacteria,4NDZ5@976|Bacteroidetes,2FNJD@200643|Bacteroidia,22X1R@171551|Porphyromonadaceae 976|Bacteroidetes H Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA) queA - 2.4.99.17 ko:K07568 - - - - ko00000,ko01000,ko03016 - - - Queuosine_synth BECNEDJF_00564 999419.HMPREF1077_00344 4.31e-176 491.0 COG0543@1|root,COG0543@2|Bacteria,4NJ0I@976|Bacteroidetes,2FNBW@200643|Bacteroidia,22WH8@171551|Porphyromonadaceae 976|Bacteroidetes C Ferredoxin-NADP reductase gltD - 1.18.1.2,1.19.1.1 ko:K00528 - - R10159 - ko00000,ko01000 - - - DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1 BECNEDJF_00565 411477.PARMER_01466 0.0 946.0 COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,2FMJF@200643|Bacteroidia,22XDN@171551|Porphyromonadaceae 976|Bacteroidetes E catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation gltA - 1.3.1.1,1.4.1.13,1.4.1.14 ko:K00266,ko:K17722 ko00240,ko00250,ko00410,ko00770,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00240,map00250,map00410,map00770,map00910,map01100,map01110,map01120,map01130,map01230 M00046 R00093,R00114,R00248,R00977,R01414,R11026 RC00006,RC00010,RC00072,RC00123,RC02799 ko00000,ko00001,ko00002,ko01000 - - - DHODB_Fe-S_bind,FAD_binding_6,Fer4_20,NAD_binding_1,Pyr_redox_2 BECNEDJF_00566 411477.PARMER_01465 0.0 1430.0 COG0614@1|root,COG0614@2|Bacteria,4NEF0@976|Bacteroidetes,2FNDC@200643|Bacteroidia,2323V@171551|Porphyromonadaceae 976|Bacteroidetes P Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00567 411477.PARMER_01464 0.0 2161.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22W9I@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00568 411477.PARMER_00063 5.1e-93 280.0 COG0836@1|root,COG0836@2|Bacteria,4NE1Y@976|Bacteroidetes,2FNHF@200643|Bacteroidia,22X4P@171551|Porphyromonadaceae 976|Bacteroidetes M mannose-1-phosphate guanylyltransferase manC - 2.7.7.13 ko:K00971 ko00051,ko00520,ko01100,ko01110,map00051,map00520,map01100,map01110 M00114,M00361,M00362 R00885 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase BECNEDJF_00569 411477.PARMER_00065 2.75e-244 670.0 COG2755@1|root,COG2755@2|Bacteria,4NFN6@976|Bacteroidetes,2FKZ2@200643|Bacteroidia,22W3N@171551|Porphyromonadaceae 976|Bacteroidetes E GSCFA family - - - - - - - - - - - - GSCFA BECNEDJF_00570 411477.PARMER_00066 0.0 1623.0 COG0770@1|root,COG0787@1|root,COG0770@2|Bacteria,COG0787@2|Bacteria,4NEXM@976|Bacteroidetes,2FMM3@200643|Bacteroidia,22WCC@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids alr - 5.1.1.1,6.3.2.10 ko:K01775,ko:K01929 ko00300,ko00473,ko00550,ko01100,ko01502,map00300,map00473,map00550,map01100,map01502 - R00401,R04573,R04617 RC00064,RC00141,RC00285 ko00000,ko00001,ko01000,ko01011 - - - Ala_racemase_C,Ala_racemase_N,Mur_ligase,Mur_ligase_M BECNEDJF_00571 411477.PARMER_00067 1.84e-202 560.0 COG0623@1|root,COG0623@2|Bacteria,4NEVE@976|Bacteroidetes,2FM85@200643|Bacteroidia,22W1Y@171551|Porphyromonadaceae 976|Bacteroidetes I Enoyl- acyl-carrier-protein reductase NADH fabI - 1.3.1.10,1.3.1.9 ko:K00208 ko00061,ko00333,ko00780,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01100,map01130,map01212 M00083,M00572 R01404,R04429,R04430,R04724,R04725,R04955,R04956,R04958,R04959,R04961,R04962,R04966,R04967,R04969,R04970,R07765,R10118,R10122,R11671 RC00052,RC00076,RC00120 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 BECNEDJF_00572 411477.PARMER_00068 6.98e-143 403.0 COG0009@1|root,COG0009@2|Bacteria,4NDZR@976|Bacteroidetes,2FP9A@200643|Bacteroidia,22XEI@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the SUA5 family yciO - - - - - - - - - - - Sua5_yciO_yrdC BECNEDJF_00573 999419.HMPREF1077_01856 0.0 885.0 COG0232@1|root,COG0232@2|Bacteria,4NENM@976|Bacteroidetes,2FP36@200643|Bacteroidia,22X6H@171551|Porphyromonadaceae 976|Bacteroidetes F Dehydrogenase dgt - 3.1.5.1 ko:K01129 ko00230,map00230 - R01856 RC00017 ko00000,ko00001,ko01000 - - - HD,HD_assoc BECNEDJF_00574 411477.PARMER_00070 5e-224 617.0 COG1162@1|root,COG1162@2|Bacteria,4NE5H@976|Bacteroidetes,2FNY9@200643|Bacteroidia,22WRP@171551|Porphyromonadaceae 976|Bacteroidetes S One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit rsgA - 3.1.3.100 ko:K06949 ko00730,ko01100,map00730,map01100 - R00615,R02135 RC00002,RC00017 ko00000,ko00001,ko01000,ko03009 - - - RsgA_GTPase,RsgA_N BECNEDJF_00575 449673.BACSTE_00243 1.15e-205 570.0 COG2452@1|root,COG2452@2|Bacteria,4NQVV@976|Bacteroidetes,2FQS5@200643|Bacteroidia,4AMAV@815|Bacteroidaceae 976|Bacteroidetes L DNA binding domain, excisionase family - - - - - - - - - - - - HTH_17 BECNEDJF_00576 411477.PARMER_03076 1.34e-29 112.0 COG2755@1|root,COG2755@2|Bacteria,4NEAZ@976|Bacteroidetes,2FM11@200643|Bacteroidia 976|Bacteroidetes E COG NOG09493 non supervised orthologous group - - - - - - - - - - - - GxDLY,Lipase_GDSL_2,Lipase_GDSL_3 BECNEDJF_00577 411477.PARMER_03077 1.09e-225 621.0 COG2207@1|root,COG2207@2|Bacteria,4NMFW@976|Bacteroidetes,2G07E@200643|Bacteroidia,23248@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18,HTH_AraC BECNEDJF_00578 411477.PARMER_03078 0.0 1080.0 COG1397@1|root,COG1397@2|Bacteria,4NG36@976|Bacteroidetes,2FNB7@200643|Bacteroidia,22X71@171551|Porphyromonadaceae 976|Bacteroidetes O ADP-ribosylglycohydrolase - - - - - - - - - - - - ADP_ribosyl_GH BECNEDJF_00579 411477.PARMER_03079 0.0 2127.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00580 411477.PARMER_01762 9.34e-227 646.0 COG0542@1|root,COG0542@2|Bacteria,4NE1J@976|Bacteroidetes,2FNNW@200643|Bacteroidia,22VW7@171551|Porphyromonadaceae 976|Bacteroidetes O Belongs to the ClpA ClpB family clpC - - ko:K03696 ko01100,map01100 - - - ko00000,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N,UVR BECNEDJF_00581 411477.PARMER_01761 1.39e-196 546.0 COG0715@1|root,COG0715@2|Bacteria,4NVT8@976|Bacteroidetes,2FUZH@200643|Bacteroidia,230H5@171551|Porphyromonadaceae 976|Bacteroidetes P COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components - - - ko:K02051 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - - BECNEDJF_00582 411477.PARMER_01760 0.0 885.0 COG0600@1|root,COG1116@1|root,COG0600@2|Bacteria,COG1116@2|Bacteria,4NR2E@976|Bacteroidetes,2FT4S@200643|Bacteroidia,22ZSQ@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component - - - ko:K02050 - M00188 - - ko00000,ko00002,ko02000 3.A.1.16,3.A.1.17 - - ABC_tran,BPD_transp_1 BECNEDJF_00583 411477.PARMER_01758 0.0 1322.0 COG2183@1|root,COG2183@2|Bacteria,4NETD@976|Bacteroidetes,2FMAZ@200643|Bacteroidia,22VY3@171551|Porphyromonadaceae 976|Bacteroidetes K Tex-like protein N-terminal domain yhgF - - ko:K06959 - - - - ko00000 - - - HHH_3,S1,Tex_N,Tex_YqgF BECNEDJF_00584 411477.PARMER_01757 6.08e-112 321.0 COG2606@1|root,COG2606@2|Bacteria,4NNGB@976|Bacteroidetes,2FMXW@200643|Bacteroidia,22XPG@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily ybaK - - ko:K03976 - - - - ko00000,ko01000,ko03016 - - - tRNA_edit BECNEDJF_00585 411477.PARMER_01755 6.79e-186 518.0 2B69Q@1|root,31Z76@2|Bacteria,4P4FW@976|Bacteroidetes,2FTT6@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00586 411477.PARMER_01754 2e-90 265.0 2EGY2@1|root,33AQ7@2|Bacteria,4NY9E@976|Bacteroidetes,2FSA3@200643|Bacteroidia,230TW@171551|Porphyromonadaceae 976|Bacteroidetes S Lipocalin-like domain - - - - - - - - - - - - Lipocalin_8 BECNEDJF_00587 999419.HMPREF1077_01110 2.12e-91 284.0 COG1774@1|root,COG1774@2|Bacteria,4NENX@976|Bacteroidetes,2FNYP@200643|Bacteroidia,22WXP@171551|Porphyromonadaceae 976|Bacteroidetes S PSP1 C-terminal domain protein yaaT - - - - - - - - - - - PSP1 BECNEDJF_00588 411477.PARMER_03904 3.5e-97 281.0 2ADSH@1|root,313I2@2|Bacteria,4NQMU@976|Bacteroidetes,2FUJF@200643|Bacteroidia,22YQC@171551|Porphyromonadaceae 976|Bacteroidetes S GldH lipoprotein gldH GO:0006022,GO:0006026,GO:0006030,GO:0006032,GO:0006040,GO:0006807,GO:0006928,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009987,GO:0017144,GO:0040011,GO:0042737,GO:0043170,GO:0044237,GO:0044248,GO:0046348,GO:0048870,GO:0051179,GO:0051674,GO:0071704,GO:0071976,GO:1901071,GO:1901072,GO:1901135,GO:1901136,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - GldH_lipo BECNEDJF_00589 999419.HMPREF1077_01108 0.0 885.0 COG0772@1|root,COG0772@2|Bacteria,4NDZD@976|Bacteroidetes,2FNA1@200643|Bacteroidia,22W55@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the SEDS family rodA - - ko:K05837 - - - - ko00000,ko03036 - - - FTSW_RODA_SPOVE BECNEDJF_00590 411477.PARMER_03906 0.0 1266.0 COG0768@1|root,COG0768@2|Bacteria,4NE47@976|Bacteroidetes,2FM4X@200643|Bacteroidia,22WGF@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-binding Protein mrdA - 3.4.16.4 ko:K05515 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011 - - - PBP_dimer,Transpeptidase BECNEDJF_00591 411477.PARMER_03907 6.4e-113 325.0 2AFDM@1|root,315DF@2|Bacteria,4NQ5K@976|Bacteroidetes,2FPJA@200643|Bacteroidia,22YUU@171551|Porphyromonadaceae 976|Bacteroidetes S rod shape-determining protein MreD mreD - - - - - - - - - - - - BECNEDJF_00592 411477.PARMER_03908 3.85e-199 552.0 COG1792@1|root,COG1792@2|Bacteria,4NF14@976|Bacteroidetes,2FMWS@200643|Bacteroidia,22WND@171551|Porphyromonadaceae 976|Bacteroidetes M shape-determining protein MreC mreC - - ko:K03570 - - - - ko00000,ko03036 9.B.157.1 - - MreC BECNEDJF_00593 411477.PARMER_03909 1.92e-238 656.0 COG1077@1|root,COG1077@2|Bacteria,4NETQ@976|Bacteroidetes,2FM2I@200643|Bacteroidia,22W6A@171551|Porphyromonadaceae 976|Bacteroidetes D Rod shape-determining protein MreB mreB - - ko:K03569 - - - - ko00000,ko02048,ko03036,ko04812 1.A.33.1,9.B.157.1 - - MreB_Mbl BECNEDJF_00594 411477.PARMER_03910 5.86e-289 793.0 COG0138@1|root,COG0138@2|Bacteria,4NEZD@976|Bacteroidetes,2FN3G@200643|Bacteroidia,22WKZ@171551|Porphyromonadaceae 976|Bacteroidetes F Bifunctional purine biosynthesis protein PurH purH - 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AICARFT_IMPCHas,MGS BECNEDJF_00595 999419.HMPREF1077_03084 2.61e-45 162.0 COG3696@1|root,COG3696@2|Bacteria,4P36A@976|Bacteroidetes,2FMH3@200643|Bacteroidia,22VYK@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family czcA_1 - - ko:K15726 - - - - ko00000,ko02000 2.A.6.1.2 - - ACR_tran BECNEDJF_00596 411477.PARMER_01933 3.99e-158 443.0 COG0745@1|root,COG0745@2|Bacteria,4NHXA@976|Bacteroidetes,2G2YZ@200643|Bacteroidia,22XSA@171551|Porphyromonadaceae 976|Bacteroidetes T Transcriptional regulatory protein, C terminal cusR - - ko:K07665 ko02020,map02020 M00452,M00745 - - ko00000,ko00001,ko00002,ko01504,ko02022 - - - Response_reg,Trans_reg_C BECNEDJF_00597 411477.PARMER_00008 1.36e-270 739.0 COG3274@1|root,COG3274@2|Bacteria,4NNCD@976|Bacteroidetes,2G2FY@200643|Bacteroidia,231WI@171551|Porphyromonadaceae 976|Bacteroidetes M Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 BECNEDJF_00598 411477.PARMER_00010 0.0 1008.0 COG0439@1|root,COG0439@2|Bacteria,4NFEQ@976|Bacteroidetes,2FMBN@200643|Bacteroidia,22WI1@171551|Porphyromonadaceae 976|Bacteroidetes I Biotin carboxylase C-terminal domain accC - 6.3.4.14,6.4.1.2,6.4.1.3 ko:K01961,ko:K01965 ko00061,ko00280,ko00620,ko00630,ko00640,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko01212,map00061,map00280,map00620,map00630,map00640,map00720,map01100,map01110,map01120,map01130,map01200,map01212 M00082,M00373,M00376,M00741 R00742,R01859,R04385 RC00040,RC00097,RC00253,RC00367,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Biotin_carb_C,Biotin_carb_N,CPSase_L_D2 BECNEDJF_00599 411477.PARMER_00011 3.89e-106 308.0 COG4770@1|root,COG4770@2|Bacteria,4NQ86@976|Bacteroidetes,2FNTU@200643|Bacteroidia,22YEW@171551|Porphyromonadaceae 976|Bacteroidetes I Biotin-requiring enzyme - - 6.4.1.1 ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_lipoyl BECNEDJF_00600 411477.PARMER_00012 0.0 1003.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FNCD@200643|Bacteroidia,22W7T@171551|Porphyromonadaceae 976|Bacteroidetes I Carboxyl transferase domain - - 2.1.3.15,6.4.1.3 ko:K01966 ko00280,ko00630,ko00640,ko01100,ko01120,ko01130,ko01200,map00280,map00630,map00640,map01100,map01120,map01130,map01200 M00373,M00741 R01859 RC00097,RC00609 ko00000,ko00001,ko00002,ko01000 - - - Carboxyl_trans BECNEDJF_00601 411477.PARMER_00013 0.0 875.0 COG2966@1|root,COG3610@1|root,COG2966@2|Bacteria,COG3610@2|Bacteria,4NI61@976|Bacteroidetes,2FNR6@200643|Bacteroidia,22X7F@171551|Porphyromonadaceae 976|Bacteroidetes S Putative threonine/serine exporter - - - - - - - - - - - - ThrE,ThrE_2 BECNEDJF_00602 411477.PARMER_00014 1.37e-120 343.0 COG0602@1|root,COG0602@2|Bacteria,4NN9F@976|Bacteroidetes,2FPEE@200643|Bacteroidia,22Y2A@171551|Porphyromonadaceae 976|Bacteroidetes C Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine nrdG - 1.97.1.4 ko:K04068 - - R04710 - ko00000,ko01000 - - - Fer4_12,Radical_SAM BECNEDJF_00603 411477.PARMER_00015 8.89e-106 325.0 COG1327@1|root,COG1328@1|root,COG1327@2|Bacteria,COG1328@2|Bacteria,4NGPS@976|Bacteroidetes,2FNK4@200643|Bacteroidia,22WTK@171551|Porphyromonadaceae 976|Bacteroidetes FK Ribonucleoside-triphosphate reductase nrdD - 1.1.98.6 ko:K21636 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R11633,R11634,R11635,R11636 RC00613 ko00000,ko00001,ko00002,ko01000 - - - ATP-cone,NRDD BECNEDJF_00604 411477.PARMER_01000 3.28e-256 702.0 COG1559@1|root,COG1559@2|Bacteria,4NG17@976|Bacteroidetes,2FMVX@200643|Bacteroidia,22W7W@171551|Porphyromonadaceae 976|Bacteroidetes S Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation mltG - - ko:K07082 - - - - ko00000 - - - YceG BECNEDJF_00605 411477.PARMER_01001 0.0 1058.0 COG4231@1|root,COG4231@2|Bacteria,4NJM1@976|Bacteroidetes,2FMYS@200643|Bacteroidia,22X57@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates iorA - 1.2.7.8 ko:K00179 - - - - br01601,ko00000,ko01000 - - - POR_N,TPP_enzyme_C BECNEDJF_00606 411477.PARMER_01003 5.69e-130 370.0 COG1014@1|root,COG1014@2|Bacteria,4NGN3@976|Bacteroidetes,2FP78@200643|Bacteroidia,22X20@171551|Porphyromonadaceae 976|Bacteroidetes C Indolepyruvate iorB - 1.2.7.8 ko:K00180 - - - - br01601,ko00000,ko01000 - - - POR BECNEDJF_00607 411477.PARMER_01004 6.99e-120 342.0 COG0526@1|root,COG0526@2|Bacteria,4NR1K@976|Bacteroidetes,2FS53@200643|Bacteroidia,22YKA@171551|Porphyromonadaceae 976|Bacteroidetes CO SCO1/SenC - - - - - - - - - - - - AhpC-TSA,Redoxin BECNEDJF_00608 411477.PARMER_01005 6.64e-189 524.0 COG2768@1|root,COG2768@2|Bacteria,4NFRZ@976|Bacteroidetes,2FNGT@200643|Bacteroidia,22WVW@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4 BECNEDJF_00609 411477.PARMER_01006 0.0 1647.0 COG3408@1|root,COG3408@2|Bacteria,4NHHR@976|Bacteroidetes,2FQXQ@200643|Bacteroidia 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N BECNEDJF_00610 411477.PARMER_02393 8.87e-45 157.0 COG0388@1|root,COG0388@2|Bacteria,4NEAQ@976|Bacteroidetes,2FNGK@200643|Bacteroidia,22WA7@171551|Porphyromonadaceae 976|Bacteroidetes S Carbon-nitrogen hydrolase ramA_2 - - - - - - - - - - - Acetyltransf_1,CN_hydrolase BECNEDJF_00612 411477.PARMER_04091 0.0 1965.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM37@200643|Bacteroidia,22ZZU@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00613 411477.PARMER_04090 0.0 1059.0 COG1834@1|root,COG1834@2|Bacteria,4NFQ7@976|Bacteroidetes,2FNG1@200643|Bacteroidia,22ZB2@171551|Porphyromonadaceae 976|Bacteroidetes E SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00614 411477.PARMER_04089 3.84e-280 766.0 COG4974@1|root,COG4974@2|Bacteria,4NMPM@976|Bacteroidetes,2FMU8@200643|Bacteroidia,23033@171551|Porphyromonadaceae 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_00616 411477.PARMER_04086 1.86e-305 833.0 COG2256@1|root,COG2256@2|Bacteria,4NEV8@976|Bacteroidetes,2FNF4@200643|Bacteroidia,22W72@171551|Porphyromonadaceae 976|Bacteroidetes L ATPase (AAA rarA - - ko:K07478 - - - - ko00000 - - - AAA,AAA_assoc_2,MgsA_C,RuvB_N BECNEDJF_00617 585543.HMPREF0969_00596 7.16e-192 533.0 COG3935@1|root,COG3935@2|Bacteria,4PJE6@976|Bacteroidetes,2FP2Y@200643|Bacteroidia,4APNT@815|Bacteroidaceae 976|Bacteroidetes L COG NOG19076 non supervised orthologous group - - - - - - - - - - - - DUF4373 BECNEDJF_00618 411477.PARMER_03319 5.94e-22 111.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00619 411477.PARMER_03255 0.0 1485.0 COG1882@1|root,COG1882@2|Bacteria,4NDWW@976|Bacteroidetes,2FMC2@200643|Bacteroidia,22X3W@171551|Porphyromonadaceae 976|Bacteroidetes C Psort location Cytoplasmic, score 9.97 pflB - 2.3.1.54 ko:K00656 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 - R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 - - - Gly_radical,PFL-like BECNEDJF_00620 411477.PARMER_03254 3.17e-176 490.0 COG1180@1|root,COG1180@2|Bacteria,4NHMK@976|Bacteroidetes,2FN1S@200643|Bacteroidia,22XWK@171551|Porphyromonadaceae 976|Bacteroidetes C Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine pflA - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4_12,Radical_SAM BECNEDJF_00621 999419.HMPREF1077_02141 8.79e-61 187.0 2EBGM@1|root,335H7@2|Bacteria,4NVJG@976|Bacteroidetes,2FUX7@200643|Bacteroidia,2316Y@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4884) - - - - - - - - - - - - DUF4884 BECNEDJF_00622 411477.PARMER_03251 1.74e-136 385.0 COG0450@1|root,COG0450@2|Bacteria,4NEDT@976|Bacteroidetes,2FMG5@200643|Bacteroidia,22W4F@171551|Porphyromonadaceae 976|Bacteroidetes O alkyl hydroperoxide reductase ahpC - 1.11.1.15 ko:K03386 ko04214,map04214 - - - ko00000,ko00001,ko01000,ko04147 - - - 1-cysPrx_C,AhpC-TSA BECNEDJF_00623 411477.PARMER_03421 1.1e-278 762.0 COG3712@1|root,COG3712@2|Bacteria,4NE6N@976|Bacteroidetes,2FQ9J@200643|Bacteroidia,22Y6U@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_00624 411477.PARMER_03422 2.45e-122 350.0 COG1595@1|root,COG1595@2|Bacteria,4NQJ8@976|Bacteroidetes,2FSSP@200643|Bacteroidia,231PN@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00625 411477.PARMER_03425 5.44e-60 186.0 COG1380@1|root,COG1380@2|Bacteria,4NSK7@976|Bacteroidetes,2FU8X@200643|Bacteroidia,22YED@171551|Porphyromonadaceae 976|Bacteroidetes S Murein hydrolase - - - ko:K06518 - - - - ko00000,ko02000 1.E.14.2 - - LrgA BECNEDJF_00626 411477.PARMER_03426 7.2e-144 408.0 COG1346@1|root,COG1346@2|Bacteria,4NM6T@976|Bacteroidetes,2FMZ5@200643|Bacteroidia,22X7K@171551|Porphyromonadaceae 976|Bacteroidetes M TIGR00659 family lrgB - - - - - - - - - - - LrgB BECNEDJF_00627 411477.PARMER_03427 5.82e-130 369.0 COG0231@1|root,COG0231@2|Bacteria,4NDXA@976|Bacteroidetes,2FP84@200643|Bacteroidia,22VYU@171551|Porphyromonadaceae 976|Bacteroidetes J Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase efp GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K02356 - - - - ko00000,ko03012 - - - EFP,EFP_N,Elong-fact-P_C BECNEDJF_00628 411477.PARMER_03428 6.85e-155 435.0 COG2003@1|root,COG2003@2|Bacteria,4NFBF@976|Bacteroidetes,2FNF3@200643|Bacteroidia,22XMK@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the UPF0758 family radC - - ko:K03630 - - - - ko00000 - - - RadC BECNEDJF_00629 411477.PARMER_03429 1.72e-69 209.0 COG2151@1|root,COG2151@2|Bacteria,4NSA9@976|Bacteroidetes,2FT2N@200643|Bacteroidia,22Y47@171551|Porphyromonadaceae 976|Bacteroidetes S FeS assembly SUF system protein yitW - - - - - - - - - - - FeS_assembly_P BECNEDJF_00630 411477.PARMER_03430 2.24e-194 538.0 COG2908@1|root,COG2908@2|Bacteria,4NEF1@976|Bacteroidetes,2FM2C@200643|Bacteroidia,22W7E@171551|Porphyromonadaceae 976|Bacteroidetes S UDP-2,3-diacylglucosamine hydrolase lpxH - 3.6.1.54 ko:K03269 ko00540,ko01100,map00540,map01100 M00060 R04549 RC00002 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Metallophos,Metallophos_2 BECNEDJF_00631 411477.PARMER_03051 7.28e-90 265.0 COG0864@1|root,COG0864@2|Bacteria,4NTBC@976|Bacteroidetes,2FUBM@200643|Bacteroidia,230BF@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - ko:K07722 - - - - ko00000,ko03000 - - - NikR_C,RHH_1 BECNEDJF_00632 411477.PARMER_00216 6.93e-96 292.0 2DBEW@1|root,2Z8UY@2|Bacteria,4NH98@976|Bacteroidetes,2FPNP@200643|Bacteroidia,22YKH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4832) - - - - - - - - - - - - DUF4832,DUF4874 BECNEDJF_00633 411477.PARMER_00215 0.0 1494.0 COG3669@1|root,COG3669@2|Bacteria,4NGKB@976|Bacteroidetes,2FM4I@200643|Bacteroidia,22W7Q@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain - - 3.2.1.50 ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 M00078 R07816 - ko00000,ko00001,ko00002,ko01000,ko04147 - - - NAGLU,NAGLU_C,NAGLU_N BECNEDJF_00634 411477.PARMER_00214 0.0 1116.0 COG1501@1|root,COG1501@2|Bacteria,4NJ93@976|Bacteroidetes,2FNSR@200643|Bacteroidia,22Z4Z@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 31 - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - Glyco_hydro_31 BECNEDJF_00635 411477.PARMER_00213 3.37e-123 352.0 COG1595@1|root,COG1595@2|Bacteria,4NR7M@976|Bacteroidetes,2FRPH@200643|Bacteroidia,22Y7V@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00636 411477.PARMER_00212 0.0 1048.0 COG3408@1|root,COG3408@2|Bacteria,4NFMY@976|Bacteroidetes,2FMA0@200643|Bacteroidia,22XAI@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme - - - - - - - - - - - - - BECNEDJF_00637 411477.PARMER_00212 2.19e-90 282.0 COG3408@1|root,COG3408@2|Bacteria,4NFMY@976|Bacteroidetes,2FMA0@200643|Bacteroidia,22XAI@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme - - - - - - - - - - - - - BECNEDJF_00638 411477.PARMER_00211 2.67e-222 613.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia,22XRQ@171551|Porphyromonadaceae 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR BECNEDJF_00639 411477.PARMER_03213 1.81e-136 394.0 COG4225@1|root,COG4225@2|Bacteria,4NDYS@976|Bacteroidetes,2FM61@200643|Bacteroidia,22XA8@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 BECNEDJF_00640 411477.PARMER_03987 2.71e-14 66.6 298PA@1|root,2ZQYC@2|Bacteria,4P7SE@976|Bacteroidetes,2FTQE@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 BECNEDJF_00642 411477.PARMER_02315 0.0 1327.0 COG0021@1|root,COG0021@2|Bacteria,4P14U@976|Bacteroidetes,2FN0P@200643|Bacteroidia,22WF7@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the transketolase family tkt - 2.2.1.1 ko:K00615 ko00030,ko00710,ko01051,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00710,map01051,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01067,R01641,R01830,R06590 RC00032,RC00226,RC00571,RC01560 ko00000,ko00001,ko00002,ko01000 - - - Transket_pyr,Transketolase_C,Transketolase_N BECNEDJF_00643 411477.PARMER_02314 2.29e-101 293.0 COG0698@1|root,COG0698@2|Bacteria,4NNSU@976|Bacteroidetes,2FT1X@200643|Bacteroidia,22XV0@171551|Porphyromonadaceae 976|Bacteroidetes G Ribose 5-phosphate isomerase rpiB - 5.3.1.6 ko:K01808 ko00030,ko00051,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00051,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007,M00165,M00167 R01056,R09030 RC00376,RC00434 ko00000,ko00001,ko00002,ko01000 - - - LacAB_rpiB BECNEDJF_00644 411477.PARMER_02313 5.29e-36 127.0 COG0681@1|root,COG0681@2|Bacteria,4NRG2@976|Bacteroidetes,2FTDJ@200643|Bacteroidia,22Y5E@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 BECNEDJF_00646 411477.PARMER_02311 1.38e-106 320.0 COG3391@1|root,COG3391@2|Bacteria,4NVSJ@976|Bacteroidetes,2FVH9@200643|Bacteroidia,230RV@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 BECNEDJF_00647 411477.PARMER_02311 4.55e-35 131.0 COG3391@1|root,COG3391@2|Bacteria,4NVSJ@976|Bacteroidetes,2FVH9@200643|Bacteroidia,230RV@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 BECNEDJF_00649 411477.PARMER_02310 5.19e-286 782.0 COG0457@1|root,COG0457@2|Bacteria,4NJEF@976|Bacteroidetes,2FS5G@200643|Bacteroidia,22ZDU@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - PMT_2,TPR_1,TPR_16,TPR_2,TPR_8 BECNEDJF_00652 1122931.AUAE01000014_gene2043 3.25e-192 535.0 COG0568@1|root,COG0568@2|Bacteria,4NEBF@976|Bacteroidetes,2FNVQ@200643|Bacteroidia,22XDM@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released rpoD - - ko:K03086 - - - - ko00000,ko03021 - - - Sigma70_r1_2,Sigma70_r2,Sigma70_r3,Sigma70_r4 BECNEDJF_00653 411477.PARMER_04265 0.0 1003.0 COG0265@1|root,COG0265@2|Bacteria,4NFCS@976|Bacteroidetes,2FMUA@200643|Bacteroidia,22W8K@171551|Porphyromonadaceae 976|Bacteroidetes O deoxyribonuclease HsdR degQ - - - - - - - - - - - PDZ_2,Trypsin_2 BECNEDJF_00654 999419.HMPREF1077_03678 1.33e-309 845.0 COG1295@1|root,COG1295@2|Bacteria,4NH0H@976|Bacteroidetes,2FP7P@200643|Bacteroidia,22WV5@171551|Porphyromonadaceae 976|Bacteroidetes S ribonuclease BN yihY - - ko:K07058 - - - - ko00000 - - - Virul_fac_BrkB BECNEDJF_00655 411477.PARMER_03852 4.06e-315 859.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2G334@200643|Bacteroidia,22XIB@171551|Porphyromonadaceae 976|Bacteroidetes V Polysaccharide biosynthesis C-terminal domain - - - - - - - - - - - - MatE BECNEDJF_00656 411477.PARMER_03853 8.68e-129 365.0 COG0778@1|root,COG0778@2|Bacteria,4NPZV@976|Bacteroidetes,2FNIP@200643|Bacteroidia,22XS9@171551|Porphyromonadaceae 976|Bacteroidetes C nitroreductase - - - - - - - - - - - - Nitroreductase BECNEDJF_00657 411477.PARMER_03854 3.61e-144 406.0 COG0307@1|root,COG0307@2|Bacteria,4NHI8@976|Bacteroidetes,2FNEF@200643|Bacteroidia,22W5P@171551|Porphyromonadaceae 976|Bacteroidetes H riboflavin synthase subunit alpha ribE - 2.5.1.9 ko:K00793 ko00740,ko01100,ko01110,map00740,map01100,map01110 M00125 R00066 RC00958,RC00960 ko00000,ko00001,ko00002,ko01000 - - - Lum_binding BECNEDJF_00658 411477.PARMER_03855 2.98e-80 237.0 COG2314@1|root,COG2314@2|Bacteria,4NTTC@976|Bacteroidetes,2FVGZ@200643|Bacteroidia 976|Bacteroidetes S TM2 domain protein - - - - - - - - - - - - TM2 BECNEDJF_00659 411477.PARMER_03217 0.0 1323.0 COG5434@1|root,COG5434@2|Bacteria,4NG62@976|Bacteroidetes,2FRCM@200643|Bacteroidia,22YHC@171551|Porphyromonadaceae 976|Bacteroidetes M Periplasmic copper-binding protein (NosD) - - - - - - - - - - - - Alginate_lyase,Beta_helix,Hepar_II_III,Hepar_II_III_N BECNEDJF_00660 411477.PARMER_03218 4.65e-233 642.0 28HYS@1|root,2Z843@2|Bacteria,4NJ2I@976|Bacteroidetes,2FR0D@200643|Bacteroidia,22Z4X@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4466) - - - - - - - - - - - - DUF4466 BECNEDJF_00661 411477.PARMER_03219 1.66e-119 341.0 2AR76@1|root,31GGW@2|Bacteria,4NU77@976|Bacteroidetes,2FT50@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00662 411477.PARMER_03220 0.0 1291.0 COG0614@1|root,COG0614@2|Bacteria,4NIFM@976|Bacteroidetes,2G3HP@200643|Bacteroidia 976|Bacteroidetes P SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_00663 411477.PARMER_03221 0.0 991.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,23249@171551|Porphyromonadaceae 976|Bacteroidetes H CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00664 999419.HMPREF1077_02605 2.84e-284 803.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FNAJ@200643|Bacteroidia,22WW7@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family bpeF - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran BECNEDJF_00665 411477.PARMER_02527 2.71e-235 647.0 COG0223@1|root,COG0223@2|Bacteria,4NE8U@976|Bacteroidetes,2FN5I@200643|Bacteroidia,22VZZ@171551|Porphyromonadaceae 976|Bacteroidetes J Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus fmt GO:0003674,GO:0003824,GO:0004479,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006413,GO:0006464,GO:0006518,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016741,GO:0016742,GO:0019538,GO:0019988,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036211,GO:0043043,GO:0043170,GO:0043412,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0046483,GO:0071704,GO:0071951,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 2.1.2.9 ko:K00604 ko00670,ko00970,map00670,map00970 - R03940 RC00026,RC00165 ko00000,ko00001,ko01000 - - - Formyl_trans_C,Formyl_trans_N BECNEDJF_00666 411477.PARMER_02526 0.0 1158.0 COG0038@1|root,COG0517@1|root,COG0038@2|Bacteria,COG0517@2|Bacteria,4NFCF@976|Bacteroidetes,2FNDY@200643|Bacteroidia,22VVX@171551|Porphyromonadaceae 976|Bacteroidetes P Chloride channel protein - - - ko:K03281 - - - - ko00000 2.A.49 - - CBS,Voltage_CLC BECNEDJF_00667 411477.PARMER_02525 0.0 914.0 COG2148@1|root,COG2148@2|Bacteria,4NFIA@976|Bacteroidetes,2FMUQ@200643|Bacteroidia,22XDG@171551|Porphyromonadaceae 976|Bacteroidetes M sugar transferase - - - - - - - - - - - - Bac_transf,CoA_binding_3 BECNEDJF_00668 411477.PARMER_02524 1.09e-129 368.0 COG0009@1|root,COG0009@2|Bacteria,4NM43@976|Bacteroidetes,2FPW5@200643|Bacteroidia,22XN8@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the SUA5 family rimN - 2.7.7.87 ko:K07566 - - R10463 RC00745 ko00000,ko01000,ko03009,ko03016 - - - Sua5_yciO_yrdC BECNEDJF_00670 999419.HMPREF1077_01851 3.54e-203 572.0 COG1621@1|root,COG1621@2|Bacteria,4NEYI@976|Bacteroidetes,2FM1Y@200643|Bacteroidia,22ZM7@171551|Porphyromonadaceae 976|Bacteroidetes G Psort location Cytoplasmic, score - - 3.2.1.80 ko:K03332 ko00051,map00051 - R00879 - ko00000,ko00001,ko01000 - - - DUF4980,Glyco_hydro_32C,Glyco_hydro_32N BECNEDJF_00672 411477.PARMER_00381 1.52e-158 444.0 COG1898@1|root,COG1898@2|Bacteria,4NNKW@976|Bacteroidetes,2FMBP@200643|Bacteroidia,22XD8@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4- hexulose rfbC - 5.1.3.13 ko:K01790 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R06514 RC01531 ko00000,ko00001,ko00002,ko01000 - - - dTDP_sugar_isom BECNEDJF_00673 411477.PARMER_02400 4.61e-239 665.0 COG2509@1|root,COG2509@2|Bacteria,4NEUQ@976|Bacteroidetes,2FM1G@200643|Bacteroidia,22XCV@171551|Porphyromonadaceae 976|Bacteroidetes S FAD-binding protein - - - ko:K07137 - - - - ko00000 - - - FAD_binding_2,FAD_binding_3,GIDA,HI0933_like,Pyr_redox_2 BECNEDJF_00675 411477.PARMER_01744 1.28e-275 754.0 COG0668@1|root,COG0668@2|Bacteria,4NE4R@976|Bacteroidetes,2FMKI@200643|Bacteroidia,231UB@171551|Porphyromonadaceae 976|Bacteroidetes M Mechanosensitive ion channel ybdG_1 - - ko:K16053 - - - - ko00000,ko02000 1.A.23.4.5 - - MS_channel BECNEDJF_00676 411477.PARMER_01743 1.44e-295 807.0 COG0668@1|root,COG0668@2|Bacteria,4NE4R@976|Bacteroidetes,2FN78@200643|Bacteroidia,22X9A@171551|Porphyromonadaceae 976|Bacteroidetes M Mechanosensitive ion channel ybdG_2 - - ko:K16053 - - - - ko00000,ko02000 1.A.23.4.5 - - MS_channel BECNEDJF_00677 411477.PARMER_01742 0.0 1557.0 COG3345@1|root,COG3345@2|Bacteria,4PMM4@976|Bacteroidetes,2G0H2@200643|Bacteroidia,23240@171551|Porphyromonadaceae 976|Bacteroidetes G alpha-galactosidase - - - - - - - - - - - - - BECNEDJF_00679 411477.PARMER_02471 4.82e-277 756.0 COG0470@1|root,COG0470@2|Bacteria,4NEYF@976|Bacteroidetes,2FPCQ@200643|Bacteroidia,22VVP@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III holB - 2.7.7.7 ko:K02341 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2 BECNEDJF_00680 411477.PARMER_02470 5.18e-299 817.0 COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,2FMSA@200643|Bacteroidia,22X5G@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump - - - - - - - - - - - - MatE BECNEDJF_00681 411477.PARMER_02469 2.76e-248 680.0 COG5504@1|root,COG5504@2|Bacteria,4NFZP@976|Bacteroidetes,2FMM9@200643|Bacteroidia,22XXR@171551|Porphyromonadaceae 976|Bacteroidetes O Psort location Cytoplasmic, score 8.96 gldB - - - - - - - - - - - - BECNEDJF_00682 411477.PARMER_02468 0.0 1050.0 COG0488@1|root,COG0488@2|Bacteria,4NF6E@976|Bacteroidetes,2FNX4@200643|Bacteroidia,22WZS@171551|Porphyromonadaceae 976|Bacteroidetes S ATPases associated with a variety of cellular activities - - - - - - - - - - - - ABC_tran BECNEDJF_00683 999419.HMPREF1077_03161 6.78e-253 696.0 COG0484@1|root,COG0484@2|Bacteria,4NF41@976|Bacteroidetes,2FPHH@200643|Bacteroidia,22WBJ@171551|Porphyromonadaceae 976|Bacteroidetes O ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and GrpE are required for fully efficient folding. Also involved, together with DnaK and GrpE, in the DNA replication of plasmids through activation of initiation proteins dnaJ - - ko:K03686 - - - - ko00000,ko03029,ko03110 - - - DnaJ,DnaJ_C,DnaJ_CXXCXGXG BECNEDJF_00684 411477.PARMER_02464 3.18e-85 254.0 COG0576@1|root,COG0576@2|Bacteria,4NQ6M@976|Bacteroidetes,2FPIN@200643|Bacteroidia,22Y59@171551|Porphyromonadaceae 976|Bacteroidetes O Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ grpE GO:0000166,GO:0000774,GO:0003674,GO:0005488,GO:0005515,GO:0008150,GO:0017076,GO:0030234,GO:0030554,GO:0036094,GO:0050790,GO:0051082,GO:0060589,GO:0060590,GO:0065007,GO:0065009,GO:0097159,GO:0098772,GO:1901265,GO:1901363 - ko:K03687 - - - - ko00000,ko03029,ko03110 - - - GrpE BECNEDJF_00685 411477.PARMER_02227 2.46e-115 333.0 COG1390@1|root,COG1390@2|Bacteria,4NP16@976|Bacteroidetes,2FMD8@200643|Bacteroidia,22Y2E@171551|Porphyromonadaceae 976|Bacteroidetes C subunit E - - - ko:K02121 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - vATP-synt_E BECNEDJF_00686 411477.PARMER_02226 2.56e-216 596.0 COG1527@1|root,COG1527@2|Bacteria,4NMSU@976|Bacteroidetes,2G2KA@200643|Bacteroidia,22Y3R@171551|Porphyromonadaceae 976|Bacteroidetes C Protein of unknown function (DUF2764) - - - - - - - - - - - - DUF2764 BECNEDJF_00687 411477.PARMER_02225 0.0 1164.0 COG1155@1|root,COG1155@2|Bacteria,4NIB6@976|Bacteroidetes,2FMQ6@200643|Bacteroidia,22WQG@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit atpA - 3.6.3.14,3.6.3.15 ko:K02117 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002,ko01000 3.A.2.2,3.A.2.3 - - ATP-synt_ab,ATP-synt_ab_N,ATP-synt_ab_Xtn BECNEDJF_00688 411477.PARMER_02224 4.45e-315 858.0 COG1156@1|root,COG1156@2|Bacteria,4NIH8@976|Bacteroidetes,2FNPF@200643|Bacteroidia,22WY4@171551|Porphyromonadaceae 976|Bacteroidetes C the B subunit is part of the catalytic core of the ATP synthase complex ntpB - - ko:K02118 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_ab,ATP-synt_ab_N BECNEDJF_00689 411477.PARMER_02223 1.61e-130 372.0 COG1394@1|root,COG1394@2|Bacteria,4NMF2@976|Bacteroidetes,2FM0M@200643|Bacteroidia,22X0S@171551|Porphyromonadaceae 976|Bacteroidetes C ATP synthase subunit D - - - ko:K02120 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - ATP-synt_D BECNEDJF_00690 411477.PARMER_02222 0.0 1176.0 COG1269@1|root,COG1269@2|Bacteria,4NGJ9@976|Bacteroidetes,2FMC6@200643|Bacteroidia,22X61@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the V-ATPase 116 kDa subunit family - - - ko:K02123 ko00190,ko01100,map00190,map01100 M00159 - - ko00000,ko00001,ko00002 3.A.2.2,3.A.2.3 - - V_ATPase_I BECNEDJF_00691 411477.PARMER_03948 3.95e-37 128.0 2985A@1|root,2ZVB7@2|Bacteria,4NNTB@976|Bacteroidetes,2FPUX@200643|Bacteroidia,22XX1@171551|Porphyromonadaceae 976|Bacteroidetes S Phage tail protein - - - - - - - - - - - - DUF4494 BECNEDJF_00692 411477.PARMER_03949 2.71e-159 446.0 COG0325@1|root,COG0325@2|Bacteria,4NE42@976|Bacteroidetes,2FM94@200643|Bacteroidia,22XNT@171551|Porphyromonadaceae 976|Bacteroidetes S Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis yggS - - ko:K06997 - - - - ko00000 - - - Ala_racemase_N BECNEDJF_00693 411477.PARMER_03950 6.91e-234 643.0 COG0167@1|root,COG0167@2|Bacteria,4NF4D@976|Bacteroidetes,2FM0X@200643|Bacteroidia,22WFK@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the conversion of dihydroorotate to orotate - - 1.3.98.1 ko:K00226 ko00240,ko01100,map00240,map01100 M00051 R01867 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh BECNEDJF_00694 411477.PARMER_03952 1.27e-83 246.0 COG1846@1|root,COG1846@2|Bacteria,4NU5Q@976|Bacteroidetes,2FTWZ@200643|Bacteroidia,22YFR@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix multiple antibiotic resistance protein - - - - - - - - - - - - HTH_27,MarR,MarR_2 BECNEDJF_00695 411477.PARMER_03953 0.0 1605.0 COG0446@1|root,COG0607@1|root,COG2210@1|root,COG0446@2|Bacteria,COG0607@2|Bacteria,COG2210@2|Bacteria,4PKEU@976|Bacteroidetes,2FKZ0@200643|Bacteroidia,22WZ3@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the sulfur carrier protein TusA family cdr - - - - - - - - - - - DrsE_2,Pyr_redox_2,Pyr_redox_dim,Rhodanese,TusA BECNEDJF_00696 411477.PARMER_03955 1.66e-307 838.0 COG0172@1|root,COG0172@2|Bacteria,4NED6@976|Bacteroidetes,2FN99@200643|Bacteroidia,22WPD@171551|Porphyromonadaceae 976|Bacteroidetes J seryl-tRNA synthetase serS - 6.1.1.11 ko:K01875 ko00970,map00970 M00359,M00360 R03662,R08218 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Seryl_tRNA_N,tRNA-synt_2b BECNEDJF_00697 411477.PARMER_03957 7.99e-120 343.0 COG0791@1|root,COG0791@2|Bacteria,4NQSZ@976|Bacteroidetes,2FS8Y@200643|Bacteroidia,231MA@171551|Porphyromonadaceae 976|Bacteroidetes M NlpC/P60 family mepS - 3.4.17.13 ko:K13694 - - - - ko00000,ko01000,ko01002,ko01011 - - - NLPC_P60 BECNEDJF_00698 411477.PARMER_02588 5.67e-80 253.0 COG1903@1|root,COG2099@1|root,COG1903@2|Bacteria,COG2099@2|Bacteria,4NE1Z@976|Bacteroidetes,2FMIX@200643|Bacteroidia,22WKH@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A cbiD - 2.1.1.195 ko:K02188 ko00860,ko01100,map00860,map01100 - R07773 RC00003,RC02051 ko00000,ko00001,ko01000 - - - CbiD,CbiJ BECNEDJF_00699 1235803.C825_05149 6.65e-85 258.0 28UV9@1|root,2ZGZ9@2|Bacteria,4P8CI@976|Bacteroidetes,2FZ67@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00700 411477.PARMER_02586 6.18e-238 654.0 COG1120@1|root,COG1120@2|Bacteria,4NG1Q@976|Bacteroidetes,2FMCI@200643|Bacteroidia,22XBW@171551|Porphyromonadaceae 976|Bacteroidetes HP ABC transporter, ATP-binding protein fhuC - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran BECNEDJF_00701 999419.HMPREF1077_03054 5.54e-225 622.0 COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,2FNDK@200643|Bacteroidia,22WJI@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD BECNEDJF_00702 999419.HMPREF1077_03055 4.68e-281 768.0 COG0614@1|root,COG0614@2|Bacteria,4NH9F@976|Bacteroidetes,2FMDS@200643|Bacteroidia,22WR0@171551|Porphyromonadaceae 976|Bacteroidetes P Periplasmic binding protein - - - ko:K02016 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - Peripla_BP_2 BECNEDJF_00704 411477.PARMER_02582 8.21e-187 520.0 COG2243@1|root,COG2243@2|Bacteria,4NMRW@976|Bacteroidetes,2FNTI@200643|Bacteroidia,22XNP@171551|Porphyromonadaceae 976|Bacteroidetes H Precorrin-2 C20-methyltransferase - - 2.1.1.130,2.1.1.151 ko:K03394 ko00860,ko01100,map00860,map01100 - R03948,R05808 RC00003,RC01035,RC01662 ko00000,ko00001,ko01000 - - - TP_methylase BECNEDJF_00705 411477.PARMER_02580 0.0 1085.0 COG2759@1|root,COG2759@2|Bacteria,4NG3E@976|Bacteroidetes,2FMAE@200643|Bacteroidia,22XGR@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the formate--tetrahydrofolate ligase family fhs - 6.3.4.3 ko:K01938 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R00943 RC00026,RC00111 ko00000,ko00001,ko00002,ko01000 - - - FTHFS BECNEDJF_00706 435591.BDI_3674 7.95e-229 632.0 COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,2FNDK@200643|Bacteroidia,22WJI@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD BECNEDJF_00707 411476.BACOVA_04968 2.35e-263 733.0 COG1429@1|root,COG1429@2|Bacteria,4P0BG@976|Bacteroidetes,2FMJ7@200643|Bacteroidia,4AN00@815|Bacteroidaceae 976|Bacteroidetes H COG NOG08812 non supervised orthologous group - - - - - - - - - - - - AAA-ATPase_like,PDDEXK_9 BECNEDJF_00708 435591.BDI_3673 3.6e-233 658.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2FP8W@200643|Bacteroidia,231SG@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00709 435591.BDI_3672 0.0 1486.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22WS3@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00711 411477.PARMER_03131 4.46e-229 631.0 COG3712@1|root,COG3712@2|Bacteria,4NH8I@976|Bacteroidetes,2FTRI@200643|Bacteroidia 976|Bacteroidetes PT Sigma factor regulatory protein, FecR PupR family - - - - - - - - - - - - DUF4974,FecR BECNEDJF_00712 411477.PARMER_03130 2.64e-128 365.0 COG1595@1|root,COG1595@2|Bacteria,4P3YW@976|Bacteroidetes,2FTCS@200643|Bacteroidia,231PM@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00713 411477.PARMER_03129 0.0 2123.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,2FPGA@200643|Bacteroidia,22W33@171551|Porphyromonadaceae 976|Bacteroidetes M Tricorn protease homolog - - - - - - - - - - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ BECNEDJF_00715 411479.BACUNI_01147 3.69e-159 449.0 COG2086@1|root,COG2086@2|Bacteria,4NFWB@976|Bacteroidetes,2FMG3@200643|Bacteroidia,4AN6T@815|Bacteroidaceae 976|Bacteroidetes C COG2086 Electron transfer flavoprotein beta subunit etfB - - ko:K03521 - - - - ko00000 - - - ETF BECNEDJF_00716 411477.PARMER_04345 5.4e-272 743.0 COG0641@1|root,COG0641@2|Bacteria,4NG1N@976|Bacteroidetes,2FMBY@200643|Bacteroidia,22WJ8@171551|Porphyromonadaceae 976|Bacteroidetes C oxidizes both cysteine and serine residues to C-alpha-formylglycine in sulfatase enzyme protein substrates atsB - - ko:K06871 - - - - ko00000 - - - Fer4_12,Fer4_14,Radical_SAM,SPASM BECNEDJF_00717 411477.PARMER_03504 6e-58 179.0 2C9BK@1|root,300HS@2|Bacteria,4PHKY@976|Bacteroidetes,2FUT3@200643|Bacteroidia,22YQ9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4286) - - - - - - - - - - - - DUF4286 BECNEDJF_00718 411477.PARMER_03505 3.66e-132 374.0 COG0817@1|root,COG0817@2|Bacteria,4NDV6@976|Bacteroidetes,2FNM6@200643|Bacteroidia,22WG4@171551|Porphyromonadaceae 976|Bacteroidetes L Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group ruvC - 3.1.22.4 ko:K01159 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvC BECNEDJF_00719 411477.PARMER_03506 0.0 889.0 COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,2FM43@200643|Bacteroidia,22WFZ@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the Glu Leu Phe Val dehydrogenases family gdh GO:0005575,GO:0005623,GO:0009986,GO:0044464 1.4.1.4 ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 - R00248 RC00006,RC02799 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,ELFV_dehydrog_N BECNEDJF_00720 411477.PARMER_03508 0.0 1955.0 COG0574@1|root,COG0745@1|root,COG0574@2|Bacteria,COG0745@2|Bacteria,4NGSQ@976|Bacteroidetes,2FM60@200643|Bacteroidia,22W01@171551|Porphyromonadaceae 976|Bacteroidetes GKT Pyruvate phosphate dikinase, PEP pyruvate binding domain ppsA - - - - - - - - - - - PPDK_N,Response_reg BECNEDJF_00721 411477.PARMER_03509 5.77e-245 672.0 COG1409@1|root,COG1409@2|Bacteria,4NH6X@976|Bacteroidetes,2FNXS@200643|Bacteroidia,22WHG@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos BECNEDJF_00722 411477.PARMER_03510 1.33e-242 666.0 COG1409@1|root,COG1409@2|Bacteria,4NEQ8@976|Bacteroidetes,2FNYC@200643|Bacteroidia,22XK6@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos BECNEDJF_00723 411477.PARMER_03942 5.45e-103 321.0 COG1596@1|root,COG1596@2|Bacteria,4NEXJ@976|Bacteroidetes,2FM4E@200643|Bacteroidia,22WXT@171551|Porphyromonadaceae 976|Bacteroidetes M Polysaccharide biosynthesis/export protein kpsD - - - - - - - - - - - Caps_synth_GfcC,Poly_export,SLBB BECNEDJF_00724 411477.PARMER_02942 8e-275 753.0 COG0842@1|root,COG0842@2|Bacteria,4NJWT@976|Bacteroidetes,2FP7Q@200643|Bacteroidia,22WB7@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 BECNEDJF_00725 411477.PARMER_02941 3.78e-225 622.0 COG0845@1|root,COG0845@2|Bacteria,4NI28@976|Bacteroidetes,2G38K@200643|Bacteroidia,22XD4@171551|Porphyromonadaceae 976|Bacteroidetes M Biotin-lipoyl like - - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 BECNEDJF_00726 411477.PARMER_02940 0.0 912.0 COG1538@1|root,COG1538@2|Bacteria,4NG42@976|Bacteroidetes,2FMZB@200643|Bacteroidia,22VXK@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_00727 411477.PARMER_02939 2.73e-283 775.0 COG2271@1|root,COG2271@2|Bacteria,4PKVW@976|Bacteroidetes,2FKZD@200643|Bacteroidia,22WE6@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily fsr - - ko:K08223 - - - - ko00000,ko02000 2.A.1.35 - - MFS_1 BECNEDJF_00728 411477.PARMER_02938 2.23e-129 367.0 COG1716@1|root,COG1716@2|Bacteria,4NQCI@976|Bacteroidetes,2FM2E@200643|Bacteroidia,22Y5Q@171551|Porphyromonadaceae 976|Bacteroidetes T FHA domain protein - - - - - - - - - - - - FHA BECNEDJF_00729 411477.PARMER_02937 2.92e-115 331.0 COG3637@1|root,COG3637@2|Bacteria,4NXWX@976|Bacteroidetes,2FRFV@200643|Bacteroidia,22YTA@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl BECNEDJF_00730 435591.BDI_3893 8.18e-86 257.0 2F0WP@1|root,33TYA@2|Bacteria,4P2HP@976|Bacteroidetes,2FS84@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00731 411477.PARMER_00083 4.28e-276 754.0 COG2931@1|root,COG2931@2|Bacteria,4NNN8@976|Bacteroidetes,2FNV2@200643|Bacteroidia,22Y2T@171551|Porphyromonadaceae 976|Bacteroidetes Q Clostripain family - - - - - - - - - - - - Peptidase_C11 BECNEDJF_00732 411477.PARMER_00084 0.0 1449.0 COG4288@1|root,COG4288@2|Bacteria,4NHM6@976|Bacteroidetes,2FQBP@200643|Bacteroidia,22Y8Y@171551|Porphyromonadaceae 976|Bacteroidetes S Lamin Tail Domain - - - - - - - - - - - - Big_5,CHU_C,LTD BECNEDJF_00733 411477.PARMER_00085 7.85e-241 662.0 COG0136@1|root,COG0136@2|Bacteria,4NE4V@976|Bacteroidetes,2FMHI@200643|Bacteroidia,22VZA@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate asd - 1.2.1.11 ko:K00133 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R02291 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC BECNEDJF_00734 411477.PARMER_00086 4.43e-220 606.0 COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,2FN7H@200643|Bacteroidia,22WWK@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose rfbD - 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 - - - RmlD_sub_bind BECNEDJF_00735 411477.PARMER_00087 4.34e-303 825.0 292UM@1|root,2ZQC9@2|Bacteria,4NTGF@976|Bacteroidetes,2FMY7@200643|Bacteroidia,22WZB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00736 1121094.KB894652_gene1329 1.19e-29 114.0 292UM@1|root,2ZQC9@2|Bacteria,4NTGF@976|Bacteroidetes,2FMY7@200643|Bacteroidia,4ANUN@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00737 435590.BVU_3683 5.28e-64 199.0 COG0732@1|root,COG0732@2|Bacteria 2|Bacteria V type I restriction modification DNA specificity domain - - 3.1.21.3 ko:K01154 - - - - ko00000,ko01000,ko02048 - - - Methylase_S BECNEDJF_00738 226186.BT_4543 2.94e-81 251.0 COG0732@1|root,COG0732@2|Bacteria,4NNKR@976|Bacteroidetes,2FQWY@200643|Bacteroidia,4ANQG@815|Bacteroidaceae 976|Bacteroidetes V Type I restriction modification DNA specificity domain - - 3.1.21.3 ko:K01154 - - - - ko00000,ko01000,ko02048 - - - Methylase_S BECNEDJF_00739 411477.PARMER_02689 0.0 1945.0 COG0495@1|root,COG0495@2|Bacteria,4NE5K@976|Bacteroidetes,2FM7V@200643|Bacteroidia,22X0R@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-I aminoacyl-tRNA synthetase family leuS GO:0003674,GO:0003824,GO:0004812,GO:0004823,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006429,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.4 ko:K01869 ko00970,map00970 M00359,M00360 R03657 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - Anticodon_1,DUF559,tRNA-synt_1,tRNA-synt_1_2 BECNEDJF_00740 411477.PARMER_02687 1.02e-198 551.0 COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,2FP2N@200643|Bacteroidia,22WWJ@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - DUF2179,YitT_membrane BECNEDJF_00741 411477.PARMER_02686 1.32e-138 391.0 COG0127@1|root,COG0127@2|Bacteria,4NM42@976|Bacteroidetes,2FP46@200643|Bacteroidia,22XN1@171551|Porphyromonadaceae 976|Bacteroidetes F Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions rdgB GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - - Ham1p_like BECNEDJF_00742 411477.PARMER_02685 0.0 1536.0 COG3292@1|root,COG3292@2|Bacteria,4NDWE@976|Bacteroidetes,2FQ6Y@200643|Bacteroidia,22WCG@171551|Porphyromonadaceae 976|Bacteroidetes T Two component regulator propeller - - - - - - - - - - - - Reg_prop BECNEDJF_00743 411477.PARMER_02684 7.76e-137 392.0 COG0379@1|root,COG0379@2|Bacteria,4NDVX@976|Bacteroidetes,2FMT0@200643|Bacteroidia,22VXC@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate nadA - 2.5.1.72 ko:K03517 ko00760,ko01100,map00760,map01100 M00115 R04292 RC01119 ko00000,ko00001,ko00002,ko01000 - - - NadA BECNEDJF_00744 411477.PARMER_00281 6.71e-206 569.0 COG2207@1|root,COG2207@2|Bacteria,4NJ6C@976|Bacteroidetes,2FP6V@200643|Bacteroidia 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18,HTH_AraC BECNEDJF_00746 411477.PARMER_04187 2.77e-290 794.0 COG1322@1|root,COG1322@2|Bacteria,4NE04@976|Bacteroidetes,2FQ56@200643|Bacteroidia,22XDQ@171551|Porphyromonadaceae 976|Bacteroidetes S RmuC family rmuC - - ko:K09760 - - - - ko00000 - - - RmuC BECNEDJF_00747 411477.PARMER_04186 3.21e-115 330.0 COG2077@1|root,COG2077@2|Bacteria,4NNGR@976|Bacteroidetes,2FSI3@200643|Bacteroidia,22XVV@171551|Porphyromonadaceae 976|Bacteroidetes O Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides tpx - 1.11.1.15 ko:K11065 - - - - ko00000,ko01000 - - - Redoxin BECNEDJF_00748 411477.PARMER_04184 9.03e-162 453.0 COG0745@1|root,COG0745@2|Bacteria,4NGNK@976|Bacteroidetes,2FNUC@200643|Bacteroidia,22ZQ4@171551|Porphyromonadaceae 976|Bacteroidetes T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - Response_reg,Trans_reg_C BECNEDJF_00749 411477.PARMER_04183 0.0 999.0 COG0642@1|root,COG2205@2|Bacteria,4NISE@976|Bacteroidetes,2G0BB@200643|Bacteroidia 976|Bacteroidetes T histidine kinase DNA gyrase B - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA BECNEDJF_00750 411477.PARMER_04182 0.0 1479.0 COG1629@1|root,COG1629@2|Bacteria,4P2AA@976|Bacteroidetes,2FNFC@200643|Bacteroidia,23229@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - OMP_b-brl_3 BECNEDJF_00751 411477.PARMER_02865 5.21e-115 348.0 COG0073@1|root,COG0143@1|root,COG0073@2|Bacteria,COG0143@2|Bacteria,4NECB@976|Bacteroidetes,2FNV6@200643|Bacteroidia,22WAM@171551|Porphyromonadaceae 976|Bacteroidetes J Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation metG - 6.1.1.10 ko:K01874 ko00450,ko00970,map00450,map00970 M00359,M00360 R03659,R04773 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1g,tRNA_bind BECNEDJF_00752 411477.PARMER_02866 3.94e-270 740.0 COG0399@1|root,COG0399@2|Bacteria,4NEBI@976|Bacteroidetes,2FPAJ@200643|Bacteroidia,22WTH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the DegT DnrJ EryC1 family degT - - - - - - - - - - - DegT_DnrJ_EryC1 BECNEDJF_00753 411477.PARMER_02867 1e-249 684.0 COG0673@1|root,COG0673@2|Bacteria,4NFY3@976|Bacteroidetes,2FR8Q@200643|Bacteroidia,22XGS@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase, NAD-binding domain protein - - 1.1.1.335 ko:K13016 ko00520,map00520 - R10140 RC00182 ko00000,ko00001,ko01000,ko01005 - - - GFO_IDH_MocA,GFO_IDH_MocA_C BECNEDJF_00754 411477.PARMER_02868 3.83e-104 301.0 COG1522@1|root,COG1522@2|Bacteria,4NNH2@976|Bacteroidetes,2FS1F@200643|Bacteroidia,22XNH@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix ASNC type lrp - - ko:K03719,ko:K05800 - - - - ko00000,ko03000,ko03036 - - - AsnC_trans_reg,HTH_24 BECNEDJF_00755 411477.PARMER_02869 2.02e-306 835.0 COG2873@1|root,COG2873@2|Bacteria,4NE27@976|Bacteroidetes,2FMQX@200643|Bacteroidia,22WIS@171551|Porphyromonadaceae 976|Bacteroidetes E O-acetylhomoserine aminocarboxypropyltransferase metY - 2.5.1.49 ko:K01740 ko00270,ko01100,map00270,map01100 - R01287,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP BECNEDJF_00756 411477.PARMER_02870 1.88e-221 610.0 29C0C@1|root,2ZYYV@2|Bacteria,4NPGV@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00757 999419.HMPREF1077_01430 3.11e-194 540.0 COG0330@1|root,COG0330@2|Bacteria,4NH8V@976|Bacteroidetes,2FQPC@200643|Bacteroidia,22Z0Q@171551|Porphyromonadaceae 976|Bacteroidetes O SPFH Band 7 PHB domain protein - - - - - - - - - - - - Band_7 BECNEDJF_00758 411477.PARMER_02873 4.68e-82 243.0 COG1725@1|root,COG1725@2|Bacteria,4PKHR@976|Bacteroidetes,2G09Z@200643|Bacteroidia,2313V@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix gluconate operon transcriptional repressor - - - - - - - - - - - - GntR,Peripla_BP_3 BECNEDJF_00761 1401078.HMPREF2140_10745 1.63e-123 367.0 COG0732@1|root,COG0732@2|Bacteria,4NPRH@976|Bacteroidetes,2FTC5@200643|Bacteroidia 976|Bacteroidetes V Type I restriction modification DNA specificity domain - - 3.1.21.3 ko:K01154 - - - - ko00000,ko01000,ko02048 - - - Methylase_S BECNEDJF_00762 411477.PARMER_02378 4.06e-268 733.0 COG1247@1|root,COG1670@1|root,COG1247@2|Bacteria,COG1670@2|Bacteria,4NQ4Z@976|Bacteroidetes,2FSTX@200643|Bacteroidia,22XX3@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain - - - ko:K03817 - - - - ko00000,ko01000,ko03009 - - - Acetyltransf_1,Acetyltransf_3 BECNEDJF_00763 411477.PARMER_02377 2.23e-107 309.0 COG0013@1|root,COG0013@2|Bacteria,4NNPX@976|Bacteroidetes,2FTMB@200643|Bacteroidia,22Y13@171551|Porphyromonadaceae 976|Bacteroidetes J Threonyl and Alanyl tRNA synthetase second additional domain - - - - - - - - - - - - tRNA_SAD BECNEDJF_00764 999419.HMPREF1077_03288 1.37e-224 620.0 COG1277@1|root,COG1277@2|Bacteria,4NGAT@976|Bacteroidetes,2FP5B@200643|Bacteroidia,22WDU@171551|Porphyromonadaceae 976|Bacteroidetes S ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_2 BECNEDJF_00765 411477.PARMER_02375 2.39e-174 486.0 COG1131@1|root,COG1131@2|Bacteria,4NFNM@976|Bacteroidetes,2FM6N@200643|Bacteroidia,22WPT@171551|Porphyromonadaceae 976|Bacteroidetes V AAA domain, putative AbiEii toxin, Type IV TA system yxlF_1 - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran BECNEDJF_00766 411477.PARMER_02374 7.19e-270 741.0 COG1470@1|root,COG1470@2|Bacteria,4NHIX@976|Bacteroidetes,2FN9I@200643|Bacteroidia,22WAR@171551|Porphyromonadaceae 976|Bacteroidetes S NPCBM-associated, NEW3 domain of alpha-galactosidase - - - - - - - - - - - - NPCBM_assoc BECNEDJF_00767 411477.PARMER_02373 6.61e-293 802.0 COG0126@1|root,COG0126@2|Bacteria,4NFW2@976|Bacteroidetes,2FM2Q@200643|Bacteroidia,22WBD@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the phosphoglycerate kinase family pgk - 2.7.2.3 ko:K00927 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01512 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGK BECNEDJF_00770 411477.PARMER_01416 0.0 885.0 COG0015@1|root,COG0015@2|Bacteria,4NFY8@976|Bacteroidetes,2FMYF@200643|Bacteroidia,22X1N@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily purB - 4.3.2.2 ko:K01756 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048,M00049 R01083,R04559 RC00379,RC00444,RC00445 ko00000,ko00001,ko00002,ko01000 - - - ADSL_C,ASL_C,Lyase_1 BECNEDJF_00771 999419.HMPREF1077_00375 1.47e-271 752.0 COG1187@1|root,COG1187@2|Bacteria,4NEE1@976|Bacteroidetes,2FP7M@200643|Bacteroidia,22WKX@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the pseudouridine synthase RsuA family rluB - 5.4.99.22 ko:K06178 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 BECNEDJF_00772 411477.PARMER_01413 0.0 951.0 COG0017@1|root,COG0017@2|Bacteria,4NDY4@976|Bacteroidetes,2FKYI@200643|Bacteroidia,22XA5@171551|Porphyromonadaceae 976|Bacteroidetes J Asparaginyl-tRNA synthetase asnS - 6.1.1.22 ko:K01893 ko00970,map00970 M00359,M00360 R03648 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_2,tRNA_anti-codon BECNEDJF_00773 411477.PARMER_01412 9.4e-110 315.0 COG1522@1|root,COG1522@2|Bacteria,4NMEN@976|Bacteroidetes,2FPN5@200643|Bacteroidia,22XMV@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator asnC - - ko:K03718 - - - - ko00000,ko03000 - - - AsnC_trans_reg,HTH_24,HTH_AsnC-type BECNEDJF_00774 411477.PARMER_01411 5.4e-135 382.0 COG0454@1|root,COG0456@2|Bacteria,4NSIB@976|Bacteroidetes,2FPE3@200643|Bacteroidia,22YKB@171551|Porphyromonadaceae 976|Bacteroidetes K Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_7 BECNEDJF_00775 411477.PARMER_01410 1.1e-98 287.0 COG0848@1|root,COG0848@2|Bacteria,4NKT1@976|Bacteroidetes,2FM42@200643|Bacteroidia,22XTT@171551|Porphyromonadaceae 976|Bacteroidetes U Biopolymer transporter ExbD - - - ko:K03559 - - - - ko00000,ko02000 1.A.30.2.1 - - ExbD BECNEDJF_00776 411477.PARMER_01409 1.77e-126 361.0 COG0848@1|root,COG0848@2|Bacteria,4NHYQ@976|Bacteroidetes,2FMZ4@200643|Bacteroidia,22Y6V@171551|Porphyromonadaceae 976|Bacteroidetes U Biopolymer transporter ExbD - - - - - - - - - - - - ExbD BECNEDJF_00777 999419.HMPREF1077_00381 1.75e-72 219.0 2FH6B@1|root,3490R@2|Bacteria,4NSP7@976|Bacteroidetes,2FRZ3@200643|Bacteroidia,22YSE@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - BECNEDJF_00780 411477.PARMER_00372 0.0 1569.0 COG5009@1|root,COG5009@2|Bacteria,4NECJ@976|Bacteroidetes,2FNAU@200643|Bacteroidia,22W8Z@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-binding Protein mrcA - 2.4.1.129,3.4.16.4 ko:K05366 ko00550,ko01100,ko01501,map00550,map01100,map01501 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly,Transpeptidase BECNEDJF_00781 411477.PARMER_00373 2e-224 621.0 COG2855@1|root,COG2855@2|Bacteria,4NES6@976|Bacteroidetes,2FPI8@200643|Bacteroidia,22VXH@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0324 family - - - - - - - - - - - - Cons_hypoth698 BECNEDJF_00782 411477.PARMER_00374 9.82e-203 562.0 COG0583@1|root,COG0583@2|Bacteria,4NGHS@976|Bacteroidetes,2FN5V@200643|Bacteroidia,22W95@171551|Porphyromonadaceae 976|Bacteroidetes K LysR substrate binding domain cysL - - - - - - - - - - - HTH_1,LysR_substrate BECNEDJF_00788 411477.PARMER_01648 1.76e-230 635.0 COG4191@1|root,COG4191@2|Bacteria,4PMUQ@976|Bacteroidetes 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c BECNEDJF_00789 411477.PARMER_01647 0.0 1822.0 COG1506@1|root,COG1506@2|Bacteria,4NDVD@976|Bacteroidetes,2FPXW@200643|Bacteroidia,22WN5@171551|Porphyromonadaceae 976|Bacteroidetes E Prolyl oligopeptidase family - - - - - - - - - - - - Peptidase_S9 BECNEDJF_00790 411477.PARMER_01646 1e-249 684.0 2FJ9F@1|root,34AZF@2|Bacteria,4P8DW@976|Bacteroidetes,2FZZQ@200643|Bacteroidia 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 BECNEDJF_00791 411477.PARMER_01645 4.07e-268 734.0 COG0526@1|root,COG0526@2|Bacteria,4NMSZ@976|Bacteroidetes,2FPQE@200643|Bacteroidia,22XXU@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369 BECNEDJF_00792 999419.HMPREF1077_01651 9.45e-98 286.0 2DRZT@1|root,33DVB@2|Bacteria,4NYNJ@976|Bacteroidetes 976|Bacteroidetes S Bacterial PH domain - - - - - - - - - - - - bPH_5 BECNEDJF_00793 411477.PARMER_03621 0.0 1242.0 COG0445@1|root,COG0445@2|Bacteria,4NFNH@976|Bacteroidetes,2FMA5@200643|Bacteroidia,22WWR@171551|Porphyromonadaceae 976|Bacteroidetes D NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34 gidA GO:0000166,GO:0001510,GO:0002097,GO:0002098,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0036094,GO:0043167,GO:0043168,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0048037,GO:0050660,GO:0050662,GO:0071704,GO:0090304,GO:0097159,GO:1901265,GO:1901360,GO:1901363 - ko:K03495 - - R08701 RC00053,RC00209,RC00870 ko00000,ko03016,ko03036 - - - GIDA,GIDA_assoc BECNEDJF_00794 411477.PARMER_03622 0.0 1167.0 COG0322@1|root,COG0322@2|Bacteria,4NE61@976|Bacteroidetes,2FNW9@200643|Bacteroidia,22W6Y@171551|Porphyromonadaceae 976|Bacteroidetes L The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision uvrC GO:0005575,GO:0005622,GO:0005623,GO:0006950,GO:0006974,GO:0008150,GO:0009380,GO:0009987,GO:0032991,GO:0033554,GO:0044424,GO:0044464,GO:0050896,GO:0051716,GO:1902494,GO:1905347,GO:1905348,GO:1990391 - ko:K03703 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - GIY-YIG,HHH_2,HHH_5,UVR,UvrC_HhH_N BECNEDJF_00795 411477.PARMER_03623 8.49e-105 302.0 COG1490@1|root,COG1490@2|Bacteria,4NNFF@976|Bacteroidetes,2FNMW@200643|Bacteroidia,22XWS@171551|Porphyromonadaceae 976|Bacteroidetes J rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D-aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl-tRNA entities in vivo and helps enforce protein L-homochirality dtd GO:0002161,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006399,GO:0006450,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0034660,GO:0043170,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0051499,GO:0051500,GO:0052689,GO:0065007,GO:0065008,GO:0071704,GO:0090304,GO:0106074,GO:0140098,GO:0140101,GO:1901360 - ko:K07560 - - - - ko00000,ko01000,ko03016 - - - Tyr_Deacylase BECNEDJF_00796 411477.PARMER_03624 4.46e-72 216.0 COG1694@1|root,COG1694@2|Bacteria,4NQ3H@976|Bacteroidetes,2FT28@200643|Bacteroidia,22Y6R@171551|Porphyromonadaceae 976|Bacteroidetes S MazG nucleotide pyrophosphohydrolase domain ypjD - - - - - - - - - - - MazG BECNEDJF_00797 411477.PARMER_03625 1.83e-206 573.0 COG0274@1|root,COG0274@2|Bacteria,4NGE3@976|Bacteroidetes,2FMTH@200643|Bacteroidia,22W3Q@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate deoC - 4.1.2.4 ko:K01619 ko00030,map00030 - R01066 RC00436,RC00437 ko00000,ko00001,ko01000 - - - DeoC BECNEDJF_00798 1235803.C825_00255 1.56e-144 414.0 COG5380@1|root,COG5380@2|Bacteria,4PKBP@976|Bacteroidetes,2G0CB@200643|Bacteroidia 976|Bacteroidetes O BRO family, N-terminal domain - - - - - - - - - - - - Bro-N BECNEDJF_00799 411477.PARMER_03627 2.29e-227 627.0 COG0142@1|root,COG0142@2|Bacteria,4NET2@976|Bacteroidetes,2FMMI@200643|Bacteroidia,22WX7@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the FPP GGPP synthase family ispB - 2.5.1.90 ko:K02523 ko00900,ko01110,map00900,map01110 - R09248 RC00279 ko00000,ko00001,ko01000,ko01006 - - - polyprenyl_synt BECNEDJF_00800 411477.PARMER_03628 0.0 1825.0 COG0258@1|root,COG0749@1|root,COG0258@2|Bacteria,COG0749@2|Bacteria,4NDVA@976|Bacteroidetes,2FM8X@200643|Bacteroidia,22WNP@171551|Porphyromonadaceae 976|Bacteroidetes L In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity polA - 2.7.7.7 ko:K02335 ko00230,ko00240,ko01100,ko03030,ko03410,ko03420,ko03440,map00230,map00240,map01100,map03030,map03410,map03420,map03440 - R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko01000,ko03032,ko03400 - - - 5_3_exonuc,5_3_exonuc_N,DNA_pol_A,DNA_pol_A_exo1 BECNEDJF_00802 411477.PARMER_03631 1.4e-261 717.0 COG0012@1|root,COG0012@2|Bacteria,4NF7N@976|Bacteroidetes,2FMWX@200643|Bacteroidia,22W5D@171551|Porphyromonadaceae 976|Bacteroidetes J ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner ychF - - ko:K06942 - - - - ko00000,ko03009 - - - MMR_HSR1,YchF-GTPase_C BECNEDJF_00803 411477.PARMER_03633 0.0 950.0 COG1387@1|root,COG1387@2|Bacteria,4NMBC@976|Bacteroidetes,2FNU7@200643|Bacteroidia,22ZUG@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 BECNEDJF_00804 999419.HMPREF1077_01638 2.57e-101 300.0 COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,2FQK8@200643|Bacteroidia,22XUM@171551|Porphyromonadaceae 976|Bacteroidetes U WD40-like Beta Propeller Repeat tolB3 - - - - - - - - - - - PD40 BECNEDJF_00805 411477.PARMER_03636 2.52e-114 333.0 COG0823@1|root,COG0823@2|Bacteria,4NG4S@976|Bacteroidetes,2FQK8@200643|Bacteroidia,22XUM@171551|Porphyromonadaceae 976|Bacteroidetes U WD40-like Beta Propeller Repeat tolB3 - - - - - - - - - - - PD40 BECNEDJF_00806 411477.PARMER_03638 7.49e-284 774.0 COG3274@1|root,COG3274@2|Bacteria,4NP3U@976|Bacteroidetes,2FN6D@200643|Bacteroidia,22XW5@171551|Porphyromonadaceae 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 BECNEDJF_00807 999419.HMPREF1077_01635 2.14e-243 671.0 COG4977@1|root,COG4977@2|Bacteria,4NRMC@976|Bacteroidetes,2FSF8@200643|Bacteroidia,22YUH@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 BECNEDJF_00808 411477.PARMER_03641 3.48e-224 618.0 2DNBI@1|root,32WMS@2|Bacteria,4NU4W@976|Bacteroidetes,2FQV5@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-like - - - - - - - - - - - - Mfa_like_1 BECNEDJF_00809 411477.PARMER_03642 0.0 991.0 COG0531@1|root,COG0531@2|Bacteria,4NIQT@976|Bacteroidetes,2FM2G@200643|Bacteroidia,22VW8@171551|Porphyromonadaceae 976|Bacteroidetes E glutamate gamma-aminobutyrate antiporter gadC - - ko:K20265 ko02024,map02024 - - - ko00000,ko00001,ko02000 2.A.3.7.1,2.A.3.7.3 - - AA_permease_2 BECNEDJF_00810 411477.PARMER_03643 1.01e-176 493.0 COG0664@1|root,COG0664@2|Bacteria,4PMV8@976|Bacteroidetes,2G0HJ@200643|Bacteroidia 976|Bacteroidetes T Ion channel - - - - - - - - - - - - - BECNEDJF_00811 411477.PARMER_03645 1.01e-229 632.0 COG2066@1|root,COG2066@2|Bacteria,4NERJ@976|Bacteroidetes,2FM3D@200643|Bacteroidia,22WTN@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the glutaminase family glsA GO:0003674,GO:0003824,GO:0004359,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006541,GO:0006543,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009056,GO:0009058,GO:0009063,GO:0009064,GO:0009065,GO:0009084,GO:0009987,GO:0016053,GO:0016054,GO:0016787,GO:0016810,GO:0016811,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044281,GO:0044282,GO:0044283,GO:0046394,GO:0046395,GO:0071704,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1901605,GO:1901606,GO:1901607 3.5.1.2 ko:K01425 ko00220,ko00250,ko00471,ko01100,ko04724,ko04727,ko04964,ko05206,ko05230,map00220,map00250,map00471,map01100,map04724,map04727,map04964,map05206,map05230 - R00256,R01579 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Glutaminase BECNEDJF_00812 411477.PARMER_03646 0.0 981.0 COG0076@1|root,COG0076@2|Bacteria,4NJ2F@976|Bacteroidetes,2FNM0@200643|Bacteroidia,22WZ2@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the group II decarboxylase family gadB - 4.1.1.15,4.1.2.27 ko:K01580,ko:K01634 ko00250,ko00410,ko00430,ko00600,ko00650,ko01100,ko01110,ko01120,ko02024,ko04071,ko04727,ko04940,map00250,map00410,map00430,map00600,map00650,map01100,map01110,map01120,map02024,map04071,map04727,map04940 M00027,M00100 R00261,R00489,R01682,R02464,R02466,R06516 RC00264,RC00299,RC00721,RC01266 ko00000,ko00001,ko00002,ko01000 - - - Pyridoxal_deC BECNEDJF_00813 411477.PARMER_03647 9.13e-282 771.0 COG2807@1|root,COG2807@2|Bacteria,4NHUR@976|Bacteroidetes,2FMD3@200643|Bacteroidia,22WZH@171551|Porphyromonadaceae 976|Bacteroidetes P Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 BECNEDJF_00814 411477.PARMER_03648 1.69e-201 559.0 COG0697@1|root,COG0697@2|Bacteria,4NG65@976|Bacteroidetes,2FN22@200643|Bacteroidia,22ZQV@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA BECNEDJF_00815 411477.PARMER_03649 2.34e-102 296.0 2EU1G@1|root,33MIH@2|Bacteria,4NZ7F@976|Bacteroidetes,2FUUZ@200643|Bacteroidia,22YW5@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4252) - - - - - - - - - - - - DUF4252 BECNEDJF_00816 411477.PARMER_03650 4.18e-118 338.0 COG1595@1|root,COG1595@2|Bacteria,4NREV@976|Bacteroidetes,2FNCE@200643|Bacteroidia,22YBZ@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00817 411477.PARMER_03651 2.63e-85 252.0 2BVQD@1|root,332WQ@2|Bacteria,4NXE1@976|Bacteroidetes,2FQSK@200643|Bacteroidia,22YY8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00818 411477.PARMER_03652 7.59e-108 311.0 2E9E6@1|root,333MR@2|Bacteria,4NVIJ@976|Bacteroidetes,2FQN2@200643|Bacteroidia,22YN8@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4252) - - - - - - - - - - - - DUF4252 BECNEDJF_00819 411477.PARMER_03653 0.0 2091.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22W07@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00820 411477.PARMER_03654 0.0 1031.0 COG0702@1|root,COG0702@2|Bacteria,4NEDB@976|Bacteroidetes,2FPB4@200643|Bacteroidia 976|Bacteroidetes GM COG NOG26302 non supervised orthologous group - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00823 411477.PARMER_00163 6.08e-196 546.0 COG4191@1|root,COG4191@2|Bacteria,4PKDB@976|Bacteroidetes 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - HATPase_c BECNEDJF_00824 411477.PARMER_03547 1.19e-143 405.0 28P7K@1|root,2ZC1X@2|Bacteria,4NMQB@976|Bacteroidetes,2FQ00@200643|Bacteroidia,22ZW4@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG25304 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_00825 411477.PARMER_01663 5.06e-134 403.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00826 411477.PARMER_01662 6.77e-249 682.0 2EDB5@1|root,3377G@2|Bacteria,4NZFE@976|Bacteroidetes,2G1S3@200643|Bacteroidia,2315Q@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 BECNEDJF_00827 411477.PARMER_01661 0.0 1853.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00828 411477.PARMER_01660 5.17e-250 685.0 2EG5K@1|root,339XG@2|Bacteria,4NVFE@976|Bacteroidetes,2G2D7@200643|Bacteroidia,231W5@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 BECNEDJF_00829 411477.PARMER_01659 8.91e-217 598.0 COG0708@1|root,COG0708@2|Bacteria,4NR5R@976|Bacteroidetes,2FR88@200643|Bacteroidia,230JN@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos BECNEDJF_00830 999419.HMPREF1077_00133 3.24e-250 686.0 COG3021@1|root,COG3021@2|Bacteria,4NHB3@976|Bacteroidetes,2FMQG@200643|Bacteroidia,22ZBB@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos BECNEDJF_00831 411477.PARMER_00157 1.84e-200 555.0 COG0681@1|root,COG0681@2|Bacteria,4NQT3@976|Bacteroidetes,2FPB0@200643|Bacteroidia,22YM4@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family lepB_1 - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24 BECNEDJF_00832 411477.PARMER_00156 9.9e-157 439.0 COG0224@1|root,COG0224@2|Bacteria,4NM5H@976|Bacteroidetes,2FNPU@200643|Bacteroidia,22XN5@171551|Porphyromonadaceae 976|Bacteroidetes C WbqC-like protein - - - - - - - - - - - - WbqC BECNEDJF_00833 411477.PARMER_00155 0.0 961.0 COG3263@1|root,COG3263@2|Bacteria,4NFNS@976|Bacteroidetes,2FMZZ@200643|Bacteroidia,22X6I@171551|Porphyromonadaceae 976|Bacteroidetes P Potassium cvrA - - ko:K11105 - - - - ko00000,ko02000 2.A.36.6 - - Na_H_Exchanger,TrkA_C BECNEDJF_00834 411477.PARMER_00154 0.0 1835.0 COG1305@1|root,COG1305@2|Bacteria,4NFR8@976|Bacteroidetes,2FPAP@200643|Bacteroidia,22W3W@171551|Porphyromonadaceae 976|Bacteroidetes E Transglutaminase-like superfamily - - - - - - - - - - - - Transglut_core BECNEDJF_00835 411477.PARMER_00153 4.91e-244 672.0 28H74@1|root,2Z7JF@2|Bacteria,4NFR0@976|Bacteroidetes,2FQ0B@200643|Bacteroidia,22WJE@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated protein GldN gldN - - - - - - - - - - - - BECNEDJF_00836 411477.PARMER_00152 3.8e-82 256.0 28HG4@1|root,2Z7S0@2|Bacteria,4NE3G@976|Bacteroidetes,2FNU8@200643|Bacteroidia,22WNG@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated protein GldM gldM - - - - - - - - - - - GldM_C,GldM_N BECNEDJF_00839 999419.HMPREF1077_00429 1.84e-199 552.0 COG1752@1|root,COG1752@2|Bacteria,4NERH@976|Bacteroidetes,2FNX7@200643|Bacteroidia,22XKQ@171551|Porphyromonadaceae 976|Bacteroidetes S Phospholipase - - - ko:K07001 - - - - ko00000 - - - Patatin BECNEDJF_00840 411477.PARMER_01353 0.0 1178.0 COG0366@1|root,COG0366@2|Bacteria,4NEVK@976|Bacteroidetes,2FNVI@200643|Bacteroidia,22WSY@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha amylase, catalytic domain protein amyA2 - - - - - - - - - - - Alpha-amylase,tRNA_SAD BECNEDJF_00841 411477.PARMER_01352 7.06e-221 609.0 COG0462@1|root,COG0462@2|Bacteria,4NEVF@976|Bacteroidetes,2FPH1@200643|Bacteroidia,22WNU@171551|Porphyromonadaceae 976|Bacteroidetes F Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib-5-P) prs - 2.7.6.1 ko:K00948 ko00030,ko00230,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00230,map01100,map01110,map01120,map01130,map01200,map01230 M00005 R01049 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - Pribosyl_synth,Pribosyltran_N BECNEDJF_00842 411477.PARMER_01351 6.27e-274 747.0 COG0482@1|root,COG0482@2|Bacteria,4NFXZ@976|Bacteroidetes,2FPBU@200643|Bacteroidia,22W20@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34 trmU - 2.8.1.13 ko:K00566 ko04122,map04122 - R08700 RC02313,RC02315 ko00000,ko00001,ko01000,ko03016 - - - tRNA_Me_trans BECNEDJF_00845 411477.PARMER_00355 1.41e-135 384.0 COG1595@1|root,COG1595@2|Bacteria,4NF93@976|Bacteroidetes,2FNJV@200643|Bacteroidia,22W2N@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily rpoE - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4,Sigma70_r4_2 BECNEDJF_00848 411477.PARMER_00735 3.12e-94 276.0 COG1030@1|root,COG1030@2|Bacteria,4NW09@976|Bacteroidetes,2FRYF@200643|Bacteroidia,22YD4@171551|Porphyromonadaceae 976|Bacteroidetes O NfeD-like C-terminal, partner-binding - - - - - - - - - - - - NfeD BECNEDJF_00849 411477.PARMER_00736 2.45e-122 361.0 COG0457@1|root,COG0457@2|Bacteria,4NHH0@976|Bacteroidetes,2FP90@200643|Bacteroidia,22WWE@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - PD40,TPR_16 BECNEDJF_00850 411477.PARMER_03878 3.32e-35 134.0 COG0265@1|root,COG0457@1|root,COG0265@2|Bacteria,COG0457@2|Bacteria,4NJVP@976|Bacteroidetes,2FMV8@200643|Bacteroidia,22XQ1@171551|Porphyromonadaceae 976|Bacteroidetes O Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_11,TPR_16,TPR_8,Trypsin_2 BECNEDJF_00852 411477.PARMER_03888 1.81e-22 87.4 COG2768@1|root,COG2768@2|Bacteria,4NUN8@976|Bacteroidetes,2FUIC@200643|Bacteroidia,22YQ1@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4 BECNEDJF_00853 411477.PARMER_03889 1.96e-42 140.0 2ASD9@1|root,31HSR@2|Bacteria,4NQ71@976|Bacteroidetes,2FS2B@200643|Bacteroidia,22YPC@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3276) - - - - - - - - - - - - DUF3276 BECNEDJF_00854 411477.PARMER_03319 1.1e-20 107.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00856 411477.PARMER_03767 0.0 1506.0 COG0358@1|root,COG5545@1|root,COG0358@2|Bacteria,COG5545@2|Bacteria,4NETK@976|Bacteroidetes,2FR42@200643|Bacteroidia 976|Bacteroidetes L Protein of unknown function (DUF3987) - - - - - - - - - - - - DUF3987,PriCT_2,VirE_N BECNEDJF_00857 1122931.AUAE01000010_gene4576 1.1e-16 74.3 298PA@1|root,2ZQYC@2|Bacteria,4P7SE@976|Bacteroidetes,2FVBS@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 BECNEDJF_00858 411477.PARMER_03765 6.75e-96 280.0 COG0776@1|root,COG0776@2|Bacteria,4NUQD@976|Bacteroidetes,2FS5I@200643|Bacteroidia,22YUX@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding,HU-DNA_bdg BECNEDJF_00859 411477.PARMER_00563 1.1e-80 250.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase epsC - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 BECNEDJF_00860 411479.BACUNI_02978 2.17e-06 45.4 2BTR7@1|root,32NYF@2|Bacteria,4PA00@976|Bacteroidetes,2FVW3@200643|Bacteroidia,4ASKK@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00861 411477.PARMER_00455 6.45e-111 319.0 COG0776@1|root,COG0776@2|Bacteria,4NUQD@976|Bacteroidetes,2FQEV@200643|Bacteroidia,231EM@171551|Porphyromonadaceae 976|Bacteroidetes L Bacterial DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding,HU-DNA_bdg BECNEDJF_00862 411477.PARMER_00456 6.32e-42 137.0 298PA@1|root,2ZW23@2|Bacteria,4P8MY@976|Bacteroidetes,2FUSW@200643|Bacteroidia,2317T@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 BECNEDJF_00863 1235803.C825_04869 8.26e-07 52.4 COG5464@1|root,COG5464@2|Bacteria,4NGSI@976|Bacteroidetes,2FN70@200643|Bacteroidia,22Z6Q@171551|Porphyromonadaceae 976|Bacteroidetes S PD-(D/E)XK nuclease family transposase - - - - - - - - - - - - PDDEXK_2 BECNEDJF_00864 411477.PARMER_00459 0.0 1394.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FMQ7@200643|Bacteroidia,22Z8B@171551|Porphyromonadaceae 976|Bacteroidetes S Virulence-associated protein E - - - - - - - - - - - - VirE,VirE_N BECNEDJF_00866 411477.PARMER_00461 0.0 1568.0 COG4953@1|root,COG4953@2|Bacteria,4NEG5@976|Bacteroidetes,2FNUH@200643|Bacteroidia,22W9J@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-Binding Protein C-terminus Family pbpC - 2.4.1.129 ko:K05367 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - BiPBP_C,Transgly,Transpeptidase BECNEDJF_00867 411477.PARMER_00462 4.54e-32 113.0 COG1143@1|root,COG1143@2|Bacteria,4PKDY@976|Bacteroidetes,2G3DT@200643|Bacteroidia,22YE7@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S dicluster domain - - 1.2.7.3 ko:K00176 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - Fer4 BECNEDJF_00868 411477.PARMER_00463 2.6e-258 708.0 COG0674@1|root,COG0674@2|Bacteria,4NGYK@976|Bacteroidetes,2FM6R@200643|Bacteroidia,22WCE@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the coenzyme A-dependent oxidation of 3-methyl-2-oxobutanoate coupled to the reduction of ferredoxin producing S-(2-methylpropanoyl)-CoA vorB - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR_N BECNEDJF_00869 411477.PARMER_00464 3.99e-33 114.0 292TZ@1|root,2ZQBM@2|Bacteria,4P6XJ@976|Bacteroidetes,2G1T8@200643|Bacteroidia,2319G@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00870 411477.PARMER_00465 4.01e-186 516.0 COG1013@1|root,COG1013@2|Bacteria,4NDWF@976|Bacteroidetes,2FP3C@200643|Bacteroidia,22VXD@171551|Porphyromonadaceae 976|Bacteroidetes C Oxidoreductase vorA - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C BECNEDJF_00871 411477.PARMER_00466 2.12e-126 360.0 COG1014@1|root,COG1014@2|Bacteria,4NGWJ@976|Bacteroidetes,2FNG6@200643|Bacteroidia,22X34@171551|Porphyromonadaceae 976|Bacteroidetes C 2-oxoglutarate ferredoxin oxidoreductase subunit gamma porG - 1.2.7.3 ko:K00177 ko00020,ko00720,ko01100,ko01120,ko01200,map00020,map00720,map01100,map01120,map01200 M00009,M00011,M00173,M00620 R01197 RC00004,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - POR BECNEDJF_00872 411477.PARMER_00467 0.0 1419.0 COG4206@1|root,COG4206@2|Bacteria,4NI2R@976|Bacteroidetes,2FNYT@200643|Bacteroidia,22W3I@171551|Porphyromonadaceae 976|Bacteroidetes H Putative porin - - - - - - - - - - - - Porin_10 BECNEDJF_00873 411477.PARMER_00468 9.79e-193 535.0 COG4623@1|root,COG4623@2|Bacteria,4PKED@976|Bacteroidetes,2G3EB@200643|Bacteroidia,22WXG@171551|Porphyromonadaceae 976|Bacteroidetes M Bacterial extracellular solute-binding proteins, family 3 - - - - - - - - - - - - SBP_bac_3 BECNEDJF_00874 411477.PARMER_00469 0.0 1025.0 COG0642@1|root,COG2205@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_4 BECNEDJF_00875 999419.HMPREF1077_03614 5.84e-291 796.0 COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,2FM7Y@200643|Bacteroidia,22WEV@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the DEAD box helicase family - - - - - - - - - - - - DEAD,Helicase_C BECNEDJF_00876 411477.PARMER_00471 0.0 1082.0 COG1158@1|root,COG1158@2|Bacteria,4NEFP@976|Bacteroidetes,2FN7R@200643|Bacteroidia,22X21@171551|Porphyromonadaceae 976|Bacteroidetes K Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template rho - - ko:K03628 ko03018,map03018 - - - ko00000,ko00001,ko03019,ko03021 - - - ATP-synt_ab,Rho_N,Rho_RNA_bind BECNEDJF_00877 411477.PARMER_00472 0.0 881.0 COG0037@1|root,COG0037@2|Bacteria,4NEJS@976|Bacteroidetes,2FP2A@200643|Bacteroidia,22X8C@171551|Porphyromonadaceae 976|Bacteroidetes D Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine tilS - 6.3.4.19 ko:K04075 - - R09597 RC02633,RC02634 ko00000,ko01000,ko03016 - - - ATP_bind_3,TilS_C BECNEDJF_00878 411477.PARMER_00473 6.07e-133 382.0 COG1579@1|root,COG1579@2|Bacteria,4NE36@976|Bacteroidetes,2FPGP@200643|Bacteroidia,22W5K@171551|Porphyromonadaceae 976|Bacteroidetes S Zinc ribbon domain protein - - - ko:K07164 - - - - ko00000 - - - zf-RING_7 BECNEDJF_00879 411477.PARMER_00474 1.3e-265 727.0 COG0327@1|root,COG0327@2|Bacteria,4NF51@976|Bacteroidetes,2FMW2@200643|Bacteroidia,22WCX@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the GTP cyclohydrolase I type 2 NIF3 family yqfO - - - - - - - - - - - NIF3 BECNEDJF_00880 411477.PARMER_00475 0.0 1179.0 COG0173@1|root,COG0173@2|Bacteria,4NECY@976|Bacteroidetes,2FMCA@200643|Bacteroidia,22W5B@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp) aspS - 6.1.1.12 ko:K01876 ko00970,map00970 M00359,M00360 R05577 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - GAD,tRNA-synt_2,tRNA_anti-codon BECNEDJF_00881 411477.PARMER_00477 0.0 1539.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQP@200643|Bacteroidia,22W3X@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_00882 411477.PARMER_00478 0.0 1483.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNFR@200643|Bacteroidia,22XGQ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b BECNEDJF_00883 1235803.C825_04464 1.53e-74 223.0 COG0292@1|root,COG0292@2|Bacteria,4NNKU@976|Bacteroidetes,2FSHF@200643|Bacteroidia,22XVI@171551|Porphyromonadaceae 976|Bacteroidetes J Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit rplT GO:0000027,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015934,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042273,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - ko:K02887 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L20 BECNEDJF_00884 411477.PARMER_00482 1.05e-36 124.0 COG0291@1|root,COG0291@2|Bacteria,4NUVR@976|Bacteroidetes,2FUKE@200643|Bacteroidia,22YNZ@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL35 family rpmI GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02916 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L35p BECNEDJF_00885 411477.PARMER_00483 1.1e-131 375.0 COG0290@1|root,COG0290@2|Bacteria,4NIZ5@976|Bacteroidetes,2FNF1@200643|Bacteroidia,22X5B@171551|Porphyromonadaceae 976|Bacteroidetes J IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins infC GO:0003674,GO:0003676,GO:0003723,GO:0003743,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016020,GO:0016043,GO:0019538,GO:0022411,GO:0032790,GO:0032984,GO:0032988,GO:0034641,GO:0034645,GO:0043021,GO:0043022,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903008 - ko:K02520 - - - - ko00000,ko03012,ko03029 - - - IF3_C,IF3_N BECNEDJF_00886 435591.BDI_0660 0.0 1312.0 COG0441@1|root,COG0441@2|Bacteria,4NEFT@976|Bacteroidetes,2FMAU@200643|Bacteroidia,22VXM@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr) thrS GO:0003674,GO:0003824,GO:0004812,GO:0004829,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006435,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.3 ko:K01868 ko00970,map00970 M00359,M00360 R03663 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,TGS,tRNA-synt_2b,tRNA_SAD BECNEDJF_00887 435591.BDI_0659 1.49e-208 610.0 COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes,2FMHN@200643|Bacteroidia,22WD9@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8,TPR_9 BECNEDJF_00888 435591.BDI_0658 6.09e-70 211.0 COG4770@1|root,COG4770@2|Bacteria,4NWQ0@976|Bacteroidetes,2FUXX@200643|Bacteroidia,22YSD@171551|Porphyromonadaceae 976|Bacteroidetes I Biotin-requiring enzyme - - - - - - - - - - - - Biotin_lipoyl BECNEDJF_00889 435591.BDI_0657 0.0 983.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FPY6@200643|Bacteroidia,22X9X@171551|Porphyromonadaceae 976|Bacteroidetes I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - - - - - - - - - - Carboxyl_trans BECNEDJF_00890 999419.HMPREF1077_00583 0.0 1969.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_00891 999419.HMPREF1077_00582 0.0 1232.0 2DBFZ@1|root,2Z91A@2|Bacteria,4PKZZ@976|Bacteroidetes,2G09H@200643|Bacteroidia,2324A@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00892 411477.PARMER_00832 8.64e-106 304.0 COG3023@1|root,COG3023@2|Bacteria,4NQ2J@976|Bacteroidetes,2FSAJ@200643|Bacteroidia,230FK@171551|Porphyromonadaceae 976|Bacteroidetes V N-acetylmuramoyl-L-alanine amidase - - 3.5.1.28 ko:K01447 - - R04112 RC00064,RC00141 ko00000,ko01000 - - - Amidase_2 BECNEDJF_00893 411479.BACUNI_02978 4.92e-05 42.0 2BTR7@1|root,32NYF@2|Bacteria,4PA00@976|Bacteroidetes,2FVW3@200643|Bacteroidia,4ASKK@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00894 411477.PARMER_00834 3.46e-104 301.0 COG0776@1|root,COG0776@2|Bacteria,4P3B0@976|Bacteroidetes,2FQZF@200643|Bacteroidia 976|Bacteroidetes L regulation of translation - - - - - - - - - - - - - BECNEDJF_00895 411477.PARMER_00836 3.2e-49 156.0 298PA@1|root,342KM@2|Bacteria,4P4HN@976|Bacteroidetes,2FU6Y@200643|Bacteroidia,2316R@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 BECNEDJF_00896 411477.PARMER_01797 5.22e-137 389.0 COG1347@1|root,COG1347@2|Bacteria,4NGD9@976|Bacteroidetes,2FN5K@200643|Bacteroidia,22VYS@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrD - 1.6.5.8 ko:K00349 - - - - ko00000,ko01000 - - - Rnf-Nqr BECNEDJF_00897 411477.PARMER_02659 0.0 984.0 COG0249@1|root,COG0249@2|Bacteria,4NEGB@976|Bacteroidetes,2FMFA@200643|Bacteroidia,22WUH@171551|Porphyromonadaceae 976|Bacteroidetes L that it carries out the mismatch recognition step. This protein has a weak ATPase activity mutS GO:0003674,GO:0003676,GO:0003677,GO:0003684,GO:0003690,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008094,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0030983,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0042623,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K03555 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_I,MutS_II,MutS_III,MutS_IV,MutS_V BECNEDJF_00898 999419.HMPREF1077_01613 0.0 931.0 COG2407@1|root,COG2407@2|Bacteria,4NF0C@976|Bacteroidetes,2FQMA@200643|Bacteroidia 976|Bacteroidetes G Catalyzes the conversion of L-arabinose to L-ribulose - - 5.3.1.4 ko:K01804 ko00040,ko01100,map00040,map01100 - R01761 RC00516 ko00000,ko00001,ko01000 - - - Arabinose_Isome,Fucose_iso_C BECNEDJF_00899 411477.PARMER_03656 0.0 1932.0 COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FMGH@200643|Bacteroidia,22X6X@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N BECNEDJF_00900 411477.PARMER_03655 2.6e-271 767.0 COG3250@1|root,COG3250@2|Bacteria,4NIBS@976|Bacteroidetes,2FPZ2@200643|Bacteroidia,22ZBT@171551|Porphyromonadaceae 976|Bacteroidetes G alpha-L-rhamnosidase - - - - - - - - - - - - Glyco_hydro_106 BECNEDJF_00901 411477.PARMER_02020 1.52e-146 412.0 COG0810@1|root,COG0810@2|Bacteria 2|Bacteria M energy transducer activity infB - - ko:K02519,ko:K03832 - - - - ko00000,ko02000,ko03012,ko03029 2.C.1.1 - - CarbopepD_reg_2,Gram_pos_anchor,HtaA,TonB_C,YSIRK_signal,YXWGXW BECNEDJF_00902 411477.PARMER_02018 1.64e-119 341.0 2DYZ9@1|root,34BVF@2|Bacteria,4P5EQ@976|Bacteroidetes,2FVG6@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - BECNEDJF_00903 411477.PARMER_02017 1.82e-86 281.0 COG4926@1|root,COG4926@2|Bacteria,4NFC7@976|Bacteroidetes,2FNWJ@200643|Bacteroidia,22YN6@171551|Porphyromonadaceae 976|Bacteroidetes S Phage minor structural protein - - - - - - - - - - - - Prophage_tail BECNEDJF_00904 411477.PARMER_02017 0.0 1252.0 COG4926@1|root,COG4926@2|Bacteria,4NFC7@976|Bacteroidetes,2FNWJ@200643|Bacteroidia,22YN6@171551|Porphyromonadaceae 976|Bacteroidetes S Phage minor structural protein - - - - - - - - - - - - Prophage_tail BECNEDJF_00906 411477.PARMER_02015 1.16e-74 223.0 2C21S@1|root,342FA@2|Bacteria,4P3YR@976|Bacteroidetes,2FTNG@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_00907 1235803.C825_05325 4.31e-71 216.0 2DNV9@1|root,32ZB3@2|Bacteria,4NV7Y@976|Bacteroidetes,2FTAS@200643|Bacteroidia,230T2@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00909 1122931.AUAE01000037_gene1096 1.98e-229 652.0 COG3525@1|root,COG3525@2|Bacteria,4NEQN@976|Bacteroidetes,2FMUE@200643|Bacteroidia,230PE@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4838) - - - - - - - - - - - - DUF4838,F5_F8_type_C,Glyco_hydro_20b,Glyco_hydro_67N BECNEDJF_00910 470145.BACCOP_01882 1.29e-310 874.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FPK1@200643|Bacteroidia,4ANWB@815|Bacteroidaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain protein nagZ2 - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX,CHB_HEX_C,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b BECNEDJF_00911 411477.PARMER_03067 4.83e-295 805.0 COG1106@1|root,COG1106@2|Bacteria,4NE5J@976|Bacteroidetes,2FN6S@200643|Bacteroidia,22X4S@171551|Porphyromonadaceae 976|Bacteroidetes S AAA ATPase domain - - - ko:K06926 - - - - ko00000 - - - AAA_21 BECNEDJF_00912 411477.PARMER_03068 9.03e-126 358.0 2DKX2@1|root,30PJE@2|Bacteria,4NP4Z@976|Bacteroidetes,2FRNN@200643|Bacteroidia,22XVY@171551|Porphyromonadaceae 976|Bacteroidetes S RloB-like protein - - - - - - - - - - - - RloB BECNEDJF_00913 411479.BACUNI_02610 1.36e-42 142.0 2F8RC@1|root,3413J@2|Bacteria,4P435@976|Bacteroidetes,2FT9E@200643|Bacteroidia,4ATUJ@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00914 411477.PARMER_03070 1.11e-49 157.0 COG0358@1|root,COG0358@2|Bacteria,4P4RK@976|Bacteroidetes,2FU3E@200643|Bacteroidia 976|Bacteroidetes L COG NOG22337 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_00915 411477.PARMER_01635 1.64e-140 400.0 COG0329@1|root,COG0329@2|Bacteria,4NHBA@976|Bacteroidetes,2FM35@200643|Bacteroidia,22WCK@171551|Porphyromonadaceae 976|Bacteroidetes EM Belongs to the DapA family - - 4.1.3.3,4.2.1.41,4.3.3.7 ko:K01639,ko:K01707,ko:K01714 ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R01811,R02279,R10147 RC00159,RC00600,RC00678,RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS BECNEDJF_00917 411477.PARMER_01446 2.13e-173 484.0 COG0020@1|root,COG0020@2|Bacteria,4NF2B@976|Bacteroidetes,2FMM4@200643|Bacteroidia,22WWT@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids uppS GO:0002094,GO:0003674,GO:0003824,GO:0004659,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006066,GO:0006629,GO:0006720,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0009058,GO:0009987,GO:0016093,GO:0016094,GO:0016740,GO:0016765,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046165,GO:0071704,GO:1901576,GO:1901615,GO:1901617 2.5.1.31 ko:K00806 ko00900,ko01110,map00900,map01110 - R06447 RC00279,RC02839 ko00000,ko00001,ko01000,ko01006 - - - Prenyltransf BECNEDJF_00918 411477.PARMER_01447 1.11e-180 501.0 COG3637@1|root,COG3637@2|Bacteria,4NF6B@976|Bacteroidetes,2FQWF@200643|Bacteroidia,22XT6@171551|Porphyromonadaceae 976|Bacteroidetes M Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety - - - - - - - - - - - - OMP_b-brl BECNEDJF_00919 411477.PARMER_01448 0.0 920.0 COG1621@1|root,COG1621@2|Bacteria,4NTHV@976|Bacteroidetes,2FPZA@200643|Bacteroidia,22YEN@171551|Porphyromonadaceae 976|Bacteroidetes G COG NOG27066 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_00920 411477.PARMER_01449 3.39e-250 688.0 COG0117@1|root,COG1985@1|root,COG0117@2|Bacteria,COG1985@2|Bacteria,4NFJE@976|Bacteroidetes,2FM4R@200643|Bacteroidia,22WQZ@171551|Porphyromonadaceae 976|Bacteroidetes H Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate ribD - 1.1.1.193,3.5.4.26 ko:K11752 ko00740,ko01100,ko01110,ko02024,map00740,map01100,map01110,map02024 M00125 R03458,R03459 RC00204,RC00933 ko00000,ko00001,ko00002,ko01000 - - - RibD_C,dCMP_cyt_deam_1 BECNEDJF_00921 1077285.AGDG01000032_gene4281 2.73e-25 103.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia,4AKDX@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_00922 997884.HMPREF1068_04346 1.03e-155 444.0 COG0582@1|root,COG0582@2|Bacteria,4NF9Q@976|Bacteroidetes,2FQ40@200643|Bacteroidia,4AN0R@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Phage_int_SAM_3,Phage_integrase BECNEDJF_00923 999419.HMPREF1077_03529 2.82e-143 423.0 2DM3I@1|root,31JQ3@2|Bacteria,4NRM4@976|Bacteroidetes,2FM1R@200643|Bacteroidia,231KE@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location OuterMembrane, score - - - - - - - - - - - - - BECNEDJF_00924 411477.PARMER_00361 1.6e-127 363.0 COG1595@1|root,COG1595@2|Bacteria,4NR0P@976|Bacteroidetes,2FN1H@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00925 999419.HMPREF1077_03533 7.04e-308 838.0 COG1470@1|root,COG1470@2|Bacteria,4NGFF@976|Bacteroidetes,2FN5A@200643|Bacteroidia,22X2I@171551|Porphyromonadaceae 976|Bacteroidetes S CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 BECNEDJF_00926 411477.PARMER_00363 1.68e-127 362.0 COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,2G33Y@200643|Bacteroidia,231CQ@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00927 411477.PARMER_00364 3.03e-195 542.0 COG3712@1|root,COG3712@2|Bacteria,4NMYI@976|Bacteroidetes,2FRE6@200643|Bacteroidia,22Y3D@171551|Porphyromonadaceae 976|Bacteroidetes PT FecR protein - - - - - - - - - - - - FecR BECNEDJF_00929 411477.PARMER_03432 8.27e-293 798.0 COG0282@1|root,COG0282@2|Bacteria,4NFI0@976|Bacteroidetes,2FN9W@200643|Bacteroidia,22WNE@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction ackA - 2.7.2.1 ko:K00925 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00315,R01353 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - Acetate_kinase BECNEDJF_00930 411477.PARMER_03433 2.05e-232 640.0 COG0280@1|root,COG0280@2|Bacteria,4NGX5@976|Bacteroidetes,2FMKY@200643|Bacteroidia,22X9D@171551|Porphyromonadaceae 976|Bacteroidetes C Phosphotransacetylase pta - 2.3.1.8 ko:K00625,ko:K13788 ko00430,ko00620,ko00640,ko00680,ko00720,ko01100,ko01120,ko01200,map00430,map00620,map00640,map00680,map00720,map01100,map01120,map01200 M00357,M00579 R00230,R00921 RC00004,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000 - - - AAA_26,DRTGG,PTA_PTB BECNEDJF_00931 411477.PARMER_03434 1.28e-181 506.0 COG1624@1|root,COG1624@2|Bacteria,4NG3Z@976|Bacteroidetes,2FN6K@200643|Bacteroidia,22WS7@171551|Porphyromonadaceae 976|Bacteroidetes S Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria dacA - - - - - - - - - - - DisA_N BECNEDJF_00932 411477.PARMER_03435 1.71e-203 563.0 COG0294@1|root,COG0294@2|Bacteria,4NEYJ@976|Bacteroidetes,2FN1T@200643|Bacteroidia,22W9X@171551|Porphyromonadaceae 976|Bacteroidetes H dihydropteroate synthase folP - 2.5.1.15 ko:K00796 ko00790,ko01100,map00790,map01100 M00126,M00841 R03066,R03067 RC00121,RC00842 ko00000,ko00001,ko00002,ko01000 - - - Pterin_bind BECNEDJF_00933 411477.PARMER_03436 1.94e-316 860.0 COG0770@1|root,COG0770@2|Bacteria,4NDWD@976|Bacteroidetes,2FN92@200643|Bacteroidia,22WG2@171551|Porphyromonadaceae 976|Bacteroidetes M Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein murF - 6.3.2.10 ko:K01929 ko00300,ko00550,ko01100,ko01502,map00300,map00550,map01100,map01502 - R04573,R04617 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M BECNEDJF_00935 1235788.C802_02150 1.03e-58 191.0 COG4225@1|root,COG4225@2|Bacteria,4NHK7@976|Bacteroidetes,2FPVZ@200643|Bacteroidia,4AP4K@815|Bacteroidaceae 976|Bacteroidetes S unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins - - - - - - - - - - - - Glyco_hydro_88 BECNEDJF_00936 411477.PARMER_02993 2.71e-108 311.0 COG0662@1|root,COG0662@2|Bacteria,4NQUX@976|Bacteroidetes,2FTRK@200643|Bacteroidia,22YJ5@171551|Porphyromonadaceae 976|Bacteroidetes G Cupin 2, conserved barrel domain protein - - - - - - - - - - - - - BECNEDJF_00937 411477.PARMER_02990 0.0 1204.0 COG0826@1|root,COG0826@2|Bacteria,4NEX7@976|Bacteroidetes,2FNE7@200643|Bacteroidia,22W2C@171551|Porphyromonadaceae 976|Bacteroidetes O Collagenase prtQ - - ko:K08303 ko05120,map05120 - - - ko00000,ko00001,ko01000,ko01002 - - - DUF3656,Peptidase_U32 BECNEDJF_00938 411477.PARMER_02989 3.05e-234 643.0 COG1897@1|root,COG1897@2|Bacteria,4NEUV@976|Bacteroidetes,2FPRH@200643|Bacteroidia,22WQ6@171551|Porphyromonadaceae 976|Bacteroidetes E Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine metAA GO:0003674,GO:0003824,GO:0008374,GO:0008899,GO:0016740,GO:0016746,GO:0016747,GO:0016748,GO:0016750 2.3.1.46 ko:K00651 ko00270,ko00920,ko01100,ko01110,ko01230,map00270,map00920,map01100,map01110,map01230 M00017 R01777 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - HTS BECNEDJF_00939 411477.PARMER_02988 0.0 1597.0 COG1629@1|root,COG4771@2|Bacteria,4PKKT@976|Bacteroidetes,2FR2R@200643|Bacteroidia,2323C@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug BECNEDJF_00940 411477.PARMER_02987 1.53e-93 273.0 COG0346@1|root,COG0346@2|Bacteria,4NNGG@976|Bacteroidetes,2FRZS@200643|Bacteroidia,22XX8@171551|Porphyromonadaceae 976|Bacteroidetes E methylmalonyl-CoA epimerase mce - 5.1.99.1 ko:K05606 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00375,M00376,M00741 R02765,R09979 RC00780,RC02739 ko00000,ko00001,ko00002,ko01000 - - - Glyoxalase_4 BECNEDJF_00941 411477.PARMER_01909 0.0 1018.0 COG3408@1|root,COG3408@2|Bacteria,4NHST@976|Bacteroidetes,2FQ71@200643|Bacteroidia,22X65@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid6H,Bac_rhamnosid_C BECNEDJF_00942 411477.PARMER_01908 0.0 1761.0 COG3408@1|root,COG3408@2|Bacteria,4NESP@976|Bacteroidetes,2FMGH@200643|Bacteroidia,22X2T@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N BECNEDJF_00943 411477.PARMER_01907 0.0 1548.0 COG3408@1|root,COG3408@2|Bacteria,4NF9P@976|Bacteroidetes,2FMN5@200643|Bacteroidia,22ZGB@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - - - - - - - - - - - Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N BECNEDJF_00944 411477.PARMER_01906 0.0 869.0 COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22Z8I@171551|Porphyromonadaceae 976|Bacteroidetes KMT BlaR1 peptidase M56 - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C BECNEDJF_00945 411477.PARMER_01905 3.39e-78 233.0 COG3682@1|root,COG3682@2|Bacteria,4NNVM@976|Bacteroidetes,2FSXD@200643|Bacteroidia,231D5@171551|Porphyromonadaceae 976|Bacteroidetes K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R BECNEDJF_00946 999419.HMPREF1077_02787 6.93e-284 774.0 COG0019@1|root,COG0019@2|Bacteria,4NEN0@976|Bacteroidetes,2FNN3@200643|Bacteroidia,22X37@171551|Porphyromonadaceae 976|Bacteroidetes E carboxynorspermidine decarboxylase nspC - 4.1.1.96 ko:K13747 ko00330,ko01100,map00330,map01100 - R09081,R09082 RC00299 ko00000,ko00001,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC BECNEDJF_00947 411477.PARMER_01902 1.86e-218 603.0 COG0552@1|root,COG0552@2|Bacteria,4NE9Z@976|Bacteroidetes,2FMMT@200643|Bacteroidia,22VZH@171551|Porphyromonadaceae 976|Bacteroidetes U Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC) ftsY - - ko:K03110 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2,3.A.5.7 - - SRP54,SRP54_N BECNEDJF_00948 411477.PARMER_01901 0.0 863.0 COG0621@1|root,COG0621@2|Bacteria,4NEJK@976|Bacteroidetes,2FMEW@200643|Bacteroidia,22W8G@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 rimO - 2.8.4.4 ko:K14441 - - R10652 RC00003,RC03217 ko00000,ko01000,ko03009 - - - Radical_SAM,TRAM,UPF0004 BECNEDJF_00949 411477.PARMER_01900 3.54e-61 188.0 COG0776@1|root,COG0776@2|Bacteria,4NV7A@976|Bacteroidetes,2FTT5@200643|Bacteroidia,22YSI@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the bacterial histone-like protein family himA - - ko:K03530,ko:K04764 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding BECNEDJF_00950 411477.PARMER_01899 2.24e-246 680.0 COG0776@1|root,COG1652@1|root,COG0776@2|Bacteria,COG1652@2|Bacteria,4NQVM@976|Bacteroidetes,2G047@200643|Bacteroidia,22Y7D@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the bacterial histone-like protein family - - - - - - - - - - - - Bac_DNA_binding,LysM BECNEDJF_00951 411477.PARMER_01898 2.55e-223 617.0 COG0714@1|root,COG0714@2|Bacteria,4NDVZ@976|Bacteroidetes,2FMGP@200643|Bacteroidia,22W2U@171551|Porphyromonadaceae 976|Bacteroidetes S ATPase family associated with various cellular activities (AAA) moxR - - ko:K03924 - - - - ko00000,ko01000 - - - AAA_3 BECNEDJF_00952 411477.PARMER_01897 5.93e-204 566.0 COG1721@1|root,COG1721@2|Bacteria,4NE2N@976|Bacteroidetes,2FNSY@200643|Bacteroidia,22WCY@171551|Porphyromonadaceae 976|Bacteroidetes S protein (some members contain a von Willebrand factor type A (vWA) domain) - - - - - - - - - - - - DUF58 BECNEDJF_00953 411477.PARMER_01896 4.47e-232 640.0 COG3088@1|root,COG3088@2|Bacteria,4NGHU@976|Bacteroidetes,2FP8Y@200643|Bacteroidia,22XR6@171551|Porphyromonadaceae 976|Bacteroidetes O Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - BECNEDJF_00954 999419.HMPREF1077_02795 2.36e-222 614.0 COG2304@1|root,COG2304@2|Bacteria,4NDUC@976|Bacteroidetes,2FNXM@200643|Bacteroidia,22XC0@171551|Porphyromonadaceae 976|Bacteroidetes S Von Willebrand factor type A domain batA - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA BECNEDJF_00955 411477.PARMER_01894 1.76e-234 646.0 COG2304@1|root,COG2304@2|Bacteria,4NF7Y@976|Bacteroidetes,2FN4B@200643|Bacteroidia,22WPY@171551|Porphyromonadaceae 976|Bacteroidetes S Von Willebrand factor type A domain batB - - ko:K07114 - - - - ko00000,ko02000 1.A.13.2.2,1.A.13.2.3 - - BatA,VWA,VWA_2 BECNEDJF_00956 411477.PARMER_01893 1.97e-112 330.0 COG0457@1|root,COG0457@2|Bacteria,4NH2K@976|Bacteroidetes,2FN6E@200643|Bacteroidia,22XZA@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat batC - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_8 BECNEDJF_00957 411477.PARMER_01892 0.0 1165.0 COG0457@1|root,COG0457@2|Bacteria,4NERG@976|Bacteroidetes,2FMK5@200643|Bacteroidia,22X3E@171551|Porphyromonadaceae 976|Bacteroidetes S Oxygen tolerance batD - - - - - - - - - - - BatD,TPR_2 BECNEDJF_00958 411477.PARMER_01891 2.71e-181 505.0 COG0457@1|root,COG0457@2|Bacteria,4NF5V@976|Bacteroidetes,2FP54@200643|Bacteroidia,22XN2@171551|Porphyromonadaceae 976|Bacteroidetes T Tetratricopeptide repeat batE - - - - - - - - - - - SH3_3,SH3_4,TPR_1,TPR_11,TPR_16,TPR_2 BECNEDJF_00959 411477.PARMER_01890 5.85e-158 443.0 COG0671@1|root,COG0671@2|Bacteria,4NNVQ@976|Bacteroidetes,2FRKS@200643|Bacteroidia,22XWM@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - - 3.6.1.27 ko:K19302 ko00550,map00550 - R05627 RC00002 ko00000,ko00001,ko01000,ko01011 - - - PAP2 BECNEDJF_00960 411477.PARMER_01889 1.42e-68 207.0 2CZWI@1|root,32T79@2|Bacteria,4NSNW@976|Bacteroidetes,2FTY4@200643|Bacteroidia,22YDH@171551|Porphyromonadaceae 976|Bacteroidetes S DNA-binding protein - - - - - - - - - - - - - BECNEDJF_00961 411477.PARMER_01888 1.6e-269 737.0 COG0589@1|root,COG0589@2|Bacteria,4NHBB@976|Bacteroidetes,2FPV4@200643|Bacteroidia,22WRT@171551|Porphyromonadaceae 976|Bacteroidetes T Belongs to the universal stress protein A family uspA - - - - - - - - - - - DUF2007,Usp BECNEDJF_00964 411477.PARMER_01886 2.63e-108 311.0 COG2731@1|root,COG2731@2|Bacteria,4NQU1@976|Bacteroidetes,2G2E1@200643|Bacteroidia,22Y5R@171551|Porphyromonadaceae 976|Bacteroidetes G YhcH YjgK YiaL family protein - - - - - - - - - - - - DUF386 BECNEDJF_00965 411477.PARMER_01885 0.0 1394.0 COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,2FNJA@200643|Bacteroidia,22WCT@171551|Porphyromonadaceae 976|Bacteroidetes P Copper-exporting ATPase copA - 3.6.3.4,3.6.3.54 ko:K01533,ko:K17686 ko01524,ko04016,map01524,map04016 - R00086 RC00002 ko00000,ko00001,ko01000 3.A.3.5 - - E1-E2_ATPase,HMA,Hydrolase BECNEDJF_00966 411477.PARMER_01884 1.98e-40 133.0 COG2608@1|root,COG2608@2|Bacteria,4P9HM@976|Bacteroidetes,2FVA2@200643|Bacteroidia,22Z0Y@171551|Porphyromonadaceae 976|Bacteroidetes P mercury ion transmembrane transporter activity - - - - - - - - - - - - HMA BECNEDJF_00967 411477.PARMER_01883 6.43e-160 447.0 COG1272@1|root,COG1272@2|Bacteria,4NM95@976|Bacteroidetes,2FPGK@200643|Bacteroidia,22Y04@171551|Porphyromonadaceae 976|Bacteroidetes S Haemolysin-III related hly-III - - ko:K11068 - - - - ko00000,ko02042 - - - HlyIII BECNEDJF_00968 411477.PARMER_01882 1.03e-217 602.0 COG1864@1|root,COG1864@2|Bacteria,4NFYJ@976|Bacteroidetes,2FNBK@200643|Bacteroidia,22XS4@171551|Porphyromonadaceae 976|Bacteroidetes F DNA/RNA non-specific endonuclease nucA_1 - - ko:K01173 ko04210,map04210 - - - ko00000,ko00001,ko03029 - - - Endonuclease_NS BECNEDJF_00969 411477.PARMER_01881 3.22e-228 631.0 COG0845@1|root,COG0845@2|Bacteria,4NIZF@976|Bacteroidetes,2FN5T@200643|Bacteroidia,22Y8A@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 BECNEDJF_00970 411477.PARMER_01880 0.0 1926.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FMG1@200643|Bacteroidia,22W2A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran BECNEDJF_00972 411477.PARMER_02606 1.65e-140 397.0 28PMV@1|root,2ZCAQ@2|Bacteria,4NMJQ@976|Bacteroidetes,2FM59@200643|Bacteroidia,22ZZ5@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23385 non supervised orthologous group - - - - - - - - - - - - NTP_transf_2 BECNEDJF_00973 585543.HMPREF0969_03369 2.56e-98 288.0 2C34Q@1|root,33SIJ@2|Bacteria,4P0M1@976|Bacteroidetes,2FVIK@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00976 411477.PARMER_03879 3.63e-27 109.0 COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,2FMV1@200643|Bacteroidia,22WQI@171551|Porphyromonadaceae 976|Bacteroidetes L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2 BECNEDJF_00978 411477.PARMER_03386 7.57e-216 597.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia,22XRQ@171551|Porphyromonadaceae 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR BECNEDJF_00980 999419.HMPREF1077_01944 2.8e-159 446.0 COG1595@1|root,COG1595@2|Bacteria,4NR7M@976|Bacteroidetes,2FRPH@200643|Bacteroidia,22Y7V@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_00981 411477.PARMER_03389 2.49e-39 130.0 2EJQT@1|root,33DFM@2|Bacteria,4NY43@976|Bacteroidetes,2FVKG@200643|Bacteroidia,22Z2Q@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00982 411477.PARMER_03390 0.0 1516.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22XGF@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_00983 411477.PARMER_03391 2.89e-173 484.0 COG0340@1|root,COG0340@2|Bacteria,4NHCH@976|Bacteroidetes,2FMM7@200643|Bacteroidia,22XZH@171551|Porphyromonadaceae 976|Bacteroidetes H Biotin/lipoate A/B protein ligase family birA - 6.3.4.15 ko:K03524 ko00780,ko01100,map00780,map01100 - R01074,R05145 RC00043,RC00070,RC00096,RC02896 ko00000,ko00001,ko01000,ko03000 - - - BPL_LplA_LipB BECNEDJF_00984 411477.PARMER_03392 4.29e-85 250.0 COG2315@1|root,COG2315@2|Bacteria,4NS6J@976|Bacteroidetes,2FTTX@200643|Bacteroidia,22YG6@171551|Porphyromonadaceae 976|Bacteroidetes S YjbR - - - - - - - - - - - - YjbR BECNEDJF_00985 999419.HMPREF1077_01939 3.17e-87 256.0 COG0792@1|root,COG0792@2|Bacteria,4NS7E@976|Bacteroidetes,2FSN9@200643|Bacteroidia,22YE3@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the UPF0102 family - - - ko:K07460 - - - - ko00000 - - - UPF0102 BECNEDJF_00986 999419.HMPREF1077_01938 4.54e-49 155.0 2EP0Q@1|root,33GMJ@2|Bacteria,4NY4V@976|Bacteroidetes,2FTU4@200643|Bacteroidia,22YXW@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_00987 411477.PARMER_03395 1.79e-100 291.0 COG0590@1|root,COG0590@2|Bacteria,4NNJ2@976|Bacteroidetes,2FSMJ@200643|Bacteroidia,22XW1@171551|Porphyromonadaceae 976|Bacteroidetes FJ Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2) tadA - 3.5.4.33 ko:K11991 - - R10223 RC00477 ko00000,ko01000,ko03016 - - - MafB19-deam BECNEDJF_00989 411477.PARMER_02592 0.0 1117.0 COG1022@1|root,COG1022@2|Bacteria,4NGFQ@976|Bacteroidetes,2FN1X@200643|Bacteroidia,22WYK@171551|Porphyromonadaceae 976|Bacteroidetes I AMP-binding enzyme - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding BECNEDJF_00990 411477.PARMER_02594 2.62e-159 446.0 COG3507@1|root,COG3507@2|Bacteria 2|Bacteria G Belongs to the glycosyl hydrolase 43 family - - - - - - - - - - - - DUF1080 BECNEDJF_00991 411477.PARMER_02595 0.0 1111.0 COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,2FNIS@200643|Bacteroidia,22X8D@171551|Porphyromonadaceae 976|Bacteroidetes S ATP-binding cassette protein, ChvD family - - - - - - - - - - - - ABC_tran,ABC_tran_Xtn BECNEDJF_00992 585543.HMPREF0969_01114 0.000209 45.1 2EYUQ@1|root,33S1W@2|Bacteria,4P01W@976|Bacteroidetes,2FM25@200643|Bacteroidia,4APKT@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_00993 411477.PARMER_02597 7.33e-289 791.0 COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,2FMSA@200643|Bacteroidia,22X9K@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump - - - - - - - - - - - - MatE BECNEDJF_00994 411477.PARMER_03440 0.0 887.0 COG1073@1|root,COG1073@2|Bacteria,4NG6A@976|Bacteroidetes,2FPAE@200643|Bacteroidia,22YCE@171551|Porphyromonadaceae 976|Bacteroidetes S alpha beta - - - - - - - - - - - - - BECNEDJF_00995 411477.PARMER_03441 0.0 1283.0 2DBFZ@1|root,2Z91A@2|Bacteria,4PKZZ@976|Bacteroidetes,2G09H@200643|Bacteroidia,2324A@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_00996 411477.PARMER_03442 0.0 2279.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22ZBI@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_00997 411477.PARMER_03052 0.0 1060.0 COG4206@1|root,COG4206@2|Bacteria,4NHH8@976|Bacteroidetes,2FM70@200643|Bacteroidia,22W28@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - Plug,TonB_dep_Rec BECNEDJF_00998 411477.PARMER_03053 5.2e-188 523.0 COG0413@1|root,COG0413@2|Bacteria,4NDX4@976|Bacteroidetes,2FNNC@200643|Bacteroidia,22WEU@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha-ketoisovalerate to form ketopantoate panB - 2.1.2.11 ko:K00606 ko00770,ko01100,ko01110,map00770,map01100,map01110 M00119 R01226 RC00022,RC00200 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_transf BECNEDJF_00999 411477.PARMER_03054 0.0 907.0 COG1797@1|root,COG1797@2|Bacteria,4NF1V@976|Bacteroidetes,2FNW5@200643|Bacteroidia,22W4X@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source cbiA - 6.3.5.11,6.3.5.9 ko:K02224 ko00860,ko01100,ko01120,map00860,map01100,map01120 - R05224,R05815 RC00010,RC01301 ko00000,ko00001,ko01000 - - - AAA_26,CbiA,GATase_3 BECNEDJF_01000 411477.PARMER_03055 2.67e-131 372.0 COG2096@1|root,COG2096@2|Bacteria,4NIQI@976|Bacteroidetes,2FQ6J@200643|Bacteroidia,22XQF@171551|Porphyromonadaceae 976|Bacteroidetes S ATP cob(I)alamin adenosyltransferase - - - - - - - - - - - - Cob_adeno_trans BECNEDJF_01001 411477.PARMER_03056 6.22e-72 216.0 COG3549@1|root,COG3549@2|Bacteria,4NTC3@976|Bacteroidetes,2FTVX@200643|Bacteroidia,22YJT@171551|Porphyromonadaceae 976|Bacteroidetes S RelE-like toxin of type II toxin-antitoxin system HigB - - - ko:K07334 - - - - ko00000,ko02048 - - - HigB-like_toxin BECNEDJF_01002 411477.PARMER_03057 3.51e-74 222.0 COG3093@1|root,COG3093@2|Bacteria,4NUVE@976|Bacteroidetes,2FTUK@200643|Bacteroidia,22YS0@171551|Porphyromonadaceae 976|Bacteroidetes K COG3093 Plasmid maintenance system antidote protein higA - - ko:K21498 - - - - ko00000,ko02048 - - - HTH_3 BECNEDJF_01003 411477.PARMER_03058 0.0 911.0 COG0624@1|root,COG0624@2|Bacteria,4NFGE@976|Bacteroidetes,2FN9J@200643|Bacteroidia,22WCD@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase dapE - - - - - - - - - - - M20_dimer,Peptidase_M20 BECNEDJF_01004 411477.PARMER_00366 7.1e-78 231.0 COG0720@1|root,COG0720@2|Bacteria,4NQYM@976|Bacteroidetes,2FSMG@200643|Bacteroidia,22YHS@171551|Porphyromonadaceae 976|Bacteroidetes H 6-pyruvoyl tetrahydropterin synthase queD - 4.1.2.50,4.2.3.12 ko:K01737 ko00790,ko01100,map00790,map01100 M00842,M00843 R04286,R09959 RC01117,RC02846,RC02847 ko00000,ko00001,ko00002,ko01000,ko03016 - - - PTPS BECNEDJF_01005 411477.PARMER_00367 9.42e-137 385.0 COG0602@1|root,COG0602@2|Bacteria,4NESC@976|Bacteroidetes,2FPNA@200643|Bacteroidia,22Y8Q@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7- carboxy-7-deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds queE - 4.3.99.3 ko:K10026 ko00790,ko01100,map00790,map01100 - R10002 RC02989 ko00000,ko00001,ko01000,ko03016 - - - Fer4_12,Fer4_14,Radical_SAM BECNEDJF_01006 411477.PARMER_00368 0.0 900.0 COG0044@1|root,COG0044@2|Bacteria,4NE3T@976|Bacteroidetes,2FN4X@200643|Bacteroidia,22WH4@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides pyrC - 3.5.2.3 ko:K01465 ko00240,ko01100,map00240,map01100 M00051 R01993 RC00632 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1 BECNEDJF_01007 411477.PARMER_00369 0.0 1907.0 COG5492@1|root,COG5492@2|Bacteria,4NHMV@976|Bacteroidetes,2FM12@200643|Bacteroidia,22VVN@171551|Porphyromonadaceae 976|Bacteroidetes N Polysaccharide lyase family 8, N terminal alpha-helical domain - - 4.2.2.5 ko:K19049 - - - - ko00000,ko01000 - PL8 - CBM9_1,Lyase_8,Lyase_8_C,Lyase_8_N BECNEDJF_01008 411477.PARMER_00370 5.65e-204 573.0 COG0554@1|root,COG0554@2|Bacteria,4NFUH@976|Bacteroidetes,2G32Z@200643|Bacteroidia,22WN8@171551|Porphyromonadaceae 976|Bacteroidetes F Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate glpK GO:0003674,GO:0003824,GO:0004370,GO:0005975,GO:0006066,GO:0006071,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019400,GO:0019751,GO:0044237,GO:0044238,GO:0044262,GO:0044281,GO:0071704,GO:1901615 2.7.1.30 ko:K00864 ko00561,ko01100,ko03320,ko04626,map00561,map01100,map03320,map04626 - R00847 RC00002,RC00017 ko00000,ko00001,ko01000,ko04147 - - - FGGY_C,FGGY_N BECNEDJF_01009 411477.PARMER_02755 1.01e-302 826.0 COG1073@1|root,COG1073@2|Bacteria,4NFCA@976|Bacteroidetes,2FP8B@200643|Bacteroidia,22XUE@171551|Porphyromonadaceae 976|Bacteroidetes S PS-10 peptidase S37 - - - - - - - - - - - - Peptidase_S37 BECNEDJF_01010 411477.PARMER_02754 5.55e-109 313.0 COG2207@1|root,COG2207@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - HTH_18 BECNEDJF_01011 411477.PARMER_02752 4.3e-168 469.0 2F6UR@1|root,33ZAV@2|Bacteria,4P40C@976|Bacteroidetes,2FT2S@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF5036) - - - - - - - - - - - - DUF5036 BECNEDJF_01012 411477.PARMER_02751 4.56e-104 300.0 COG1238@1|root,COG1238@2|Bacteria,4NQAX@976|Bacteroidetes,2FRY9@200643|Bacteroidia,22Y6N@171551|Porphyromonadaceae 976|Bacteroidetes S SNARE associated Golgi protein - - - - - - - - - - - - SNARE_assoc BECNEDJF_01013 999419.HMPREF1077_01546 2.14e-234 645.0 2DQYE@1|root,339DJ@2|Bacteria,4NSHZ@976|Bacteroidetes,2FMS8@200643|Bacteroidia,22YSV@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - BECNEDJF_01014 411477.PARMER_02749 1.35e-301 823.0 COG0151@1|root,COG0151@2|Bacteria,4NEUN@976|Bacteroidetes,2FN59@200643|Bacteroidia,22WGM@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the GARS family purD - 6.3.4.13 ko:K01945 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04144 RC00090,RC00166 ko00000,ko00001,ko00002,ko01000 - - - GARS_A,GARS_C,GARS_N BECNEDJF_01015 411477.PARMER_02747 3.84e-219 620.0 COG1506@1|root,COG1506@2|Bacteria,4NF7I@976|Bacteroidetes,2FMJD@200643|Bacteroidia,22W5C@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase, S9A B C family, catalytic domain protein pepX2 - 3.4.14.12,3.4.14.5 ko:K01278,ko:K18574 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 BECNEDJF_01016 411477.PARMER_04354 0.0 1019.0 COG1696@1|root,COG1696@2|Bacteria,4NFK5@976|Bacteroidetes,2FM3F@200643|Bacteroidia,22X7T@171551|Porphyromonadaceae 976|Bacteroidetes M alginate O-acetyltransferase algI - - - - - - - - - - - MBOAT BECNEDJF_01017 411477.PARMER_04353 1.62e-310 847.0 COG2755@1|root,COG2755@2|Bacteria,4NGW6@976|Bacteroidetes,2FN21@200643|Bacteroidia,22XZQ@171551|Porphyromonadaceae 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL,Lipase_GDSL_2,LysM BECNEDJF_01018 411477.PARMER_04352 0.0 905.0 COG2755@1|root,COG2755@2|Bacteria,4NK39@976|Bacteroidetes,2FMHM@200643|Bacteroidia,22WFB@171551|Porphyromonadaceae 976|Bacteroidetes E COG COG2755 Lysophospholipase L1 and related esterases - - - - - - - - - - - - Lipase_GDSL,Lipase_GDSL_2 BECNEDJF_01019 411477.PARMER_04351 1.23e-135 383.0 COG0494@1|root,COG0494@2|Bacteria,4NNGW@976|Bacteroidetes,2FRB2@200643|Bacteroidia,22XT9@171551|Porphyromonadaceae 976|Bacteroidetes L NUDIX domain - - 3.6.1.13 ko:K01515 ko00230,map00230 - R01054 RC00002 ko00000,ko00001,ko01000 - - - NUDIX BECNEDJF_01020 999419.HMPREF1077_02829 2.61e-235 648.0 COG0860@1|root,COG0860@2|Bacteria,4NHZA@976|Bacteroidetes,2FP3Y@200643|Bacteroidia,22X0I@171551|Porphyromonadaceae 976|Bacteroidetes M N-acetylmuramoyl-L-alanine amidase - - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - Amidase_3 BECNEDJF_01021 411477.PARMER_01827 5.44e-257 706.0 COG0642@1|root,COG3437@1|root,COG0642@2|Bacteria,COG3437@2|Bacteria,4PMUU@976|Bacteroidetes,2G0H5@200643|Bacteroidia,22WUE@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K11527 - - - - ko00000,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA,Response_reg BECNEDJF_01023 411477.PARMER_01825 0.0 1612.0 COG3534@1|root,COG3534@2|Bacteria,4NGKW@976|Bacteroidetes,2G37N@200643|Bacteroidia,22XEV@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-arabinofuranosidase C-terminal domain - - - - - - - - - - - - Alpha-L-AF_C,CBM_4_9,DUF1080 BECNEDJF_01024 411477.PARMER_01823 0.0 1573.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b,PA14 BECNEDJF_01025 411477.PARMER_01821 1.16e-62 202.0 COG0112@1|root,COG0112@2|Bacteria,4NE30@976|Bacteroidetes,2FM07@200643|Bacteroidia,22WFH@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism glyA - 2.1.2.1 ko:K00600 ko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523 M00140,M00141,M00346,M00532 R00945,R09099 RC00022,RC00112,RC01583,RC02958 ko00000,ko00001,ko00002,ko01000 - - - SHMT BECNEDJF_01026 999419.HMPREF1077_00071 3.56e-109 324.0 COG0148@1|root,COG0148@2|Bacteria,4NF5M@976|Bacteroidetes,2FMNI@200643|Bacteroidia,22X7E@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the reversible conversion of 2- phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis eno - 4.2.1.11 ko:K01689 ko00010,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04066,map00010,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04066 M00001,M00002,M00003,M00346,M00394 R00658 RC00349 ko00000,ko00001,ko00002,ko01000,ko03019,ko04147 - - - Enolase_C,Enolase_N BECNEDJF_01029 411477.PARMER_01720 0.0 1625.0 COG1629@1|root,COG4771@2|Bacteria,4NF05@976|Bacteroidetes,2FMJS@200643|Bacteroidia,22X9C@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor - - - ko:K16089 - - - - ko00000,ko02000 1.B.14.1,1.B.14.10 - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01030 411477.PARMER_00002 1.69e-180 509.0 COG3712@1|root,COG3712@2|Bacteria,4NE6N@976|Bacteroidetes,2G30E@200643|Bacteroidia 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01033 411477.PARMER_00517 7.84e-208 575.0 COG3712@1|root,COG3712@2|Bacteria,4P1PI@976|Bacteroidetes,2FR0V@200643|Bacteroidia 976|Bacteroidetes PT Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01034 999419.HMPREF1077_03642 2.75e-292 797.0 COG0133@1|root,COG0133@2|Bacteria,4NDWP@976|Bacteroidetes,2FP09@200643|Bacteroidia,22VZ0@171551|Porphyromonadaceae 976|Bacteroidetes E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine trpB GO:0000162,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.2.1.20,5.3.1.24 ko:K01696,ko:K01817 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722,R03509 RC00209,RC00210,RC00700,RC00701,RC00945,RC02868 ko00000,ko00001,ko00002,ko01000 - - - PALP BECNEDJF_01035 999419.HMPREF1077_03643 0.0 920.0 COG0147@1|root,COG0147@2|Bacteria,4NFQ5@976|Bacteroidetes,2FN6I@200643|Bacteroidia,22XAQ@171551|Porphyromonadaceae 976|Bacteroidetes EH Anthranilate synthase component I, N terminal region trpE - 4.1.3.27 ko:K01657 ko00400,ko00405,ko01100,ko01110,ko01130,ko01230,ko02024,ko02025,map00400,map00405,map01100,map01110,map01130,map01230,map02024,map02025 M00023 R00985,R00986 RC00010,RC02148,RC02414 ko00000,ko00001,ko00002,ko01000 - - - Anth_synt_I_N,Chorismate_bind BECNEDJF_01036 411477.PARMER_03198 3.22e-207 573.0 COG0681@1|root,COG0681@2|Bacteria,4NJXI@976|Bacteroidetes,2FNKZ@200643|Bacteroidia,22XP5@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family - - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 BECNEDJF_01037 1235803.C825_00191 4.16e-216 613.0 COG1305@1|root,COG1305@2|Bacteria,4NGMN@976|Bacteroidetes,2FM89@200643|Bacteroidia 976|Bacteroidetes E non supervised orthologous group - - - - - - - - - - - - Transglut_core BECNEDJF_01038 435591.BDI_0049 2e-75 244.0 COG3391@1|root,COG3391@2|Bacteria 2|Bacteria CO amine dehydrogenase activity - - - - - - - - - - - - DUF5128 BECNEDJF_01039 411477.PARMER_03183 3.61e-135 395.0 2F8ZB@1|root,341B2@2|Bacteria,4P4SF@976|Bacteroidetes,2FUV2@200643|Bacteroidia,2318M@171551|Porphyromonadaceae 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like BECNEDJF_01040 411477.PARMER_01680 5.74e-19 80.1 2DCRY@1|root,2ZF47@2|Bacteria,4P972@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA BECNEDJF_01041 999419.HMPREF1077_00113 9.46e-110 321.0 2BZEB@1|root,2ZMZD@2|Bacteria,4NMWK@976|Bacteroidetes,2FQNP@200643|Bacteroidia,22XQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 BECNEDJF_01042 411477.PARMER_00321 7.27e-285 779.0 COG1522@1|root,COG1940@1|root,COG1522@2|Bacteria,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,2FNEQ@200643|Bacteroidia,22XBR@171551|Porphyromonadaceae 976|Bacteroidetes GK ROK family nagC - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HTH_24,ROK BECNEDJF_01043 411477.PARMER_00323 1.05e-227 626.0 COG0329@1|root,COG0329@2|Bacteria,4NHBA@976|Bacteroidetes,2FM35@200643|Bacteroidia,22WCK@171551|Porphyromonadaceae 976|Bacteroidetes EM Belongs to the DapA family nanA - 4.1.3.3,4.2.1.41,4.3.3.7 ko:K01639,ko:K01707,ko:K01714 ko00053,ko00261,ko00300,ko00520,ko01100,ko01110,ko01120,ko01130,ko01230,map00053,map00261,map00300,map00520,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R01811,R02279,R10147 RC00159,RC00600,RC00678,RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS BECNEDJF_01044 411477.PARMER_00324 0.0 860.0 COG2942@1|root,COG2942@2|Bacteria,4NEFV@976|Bacteroidetes,2FN6V@200643|Bacteroidia,22WNI@171551|Porphyromonadaceae 976|Bacteroidetes G N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) nanE - 5.1.3.8 ko:K01787 ko00520,map00520 - R01207 RC00290 ko00000,ko00001,ko01000 - - - GlcNAc_2-epim BECNEDJF_01045 411477.PARMER_00325 3.32e-303 826.0 COG2271@1|root,COG2271@2|Bacteria,4NFKX@976|Bacteroidetes,2FPKV@200643|Bacteroidia,22WHS@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily - - - ko:K08191 - - - - ko00000,ko02000 2.A.1.14.2 - - MFS_1 BECNEDJF_01046 411477.PARMER_00326 0.0 1090.0 COG4409@1|root,COG4409@2|Bacteria,4NFNK@976|Bacteroidetes,2FNCR@200643|Bacteroidia,22WP4@171551|Porphyromonadaceae 976|Bacteroidetes G N-terminal domain of BNR-repeat neuraminidase nanH - 3.2.1.18 ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 - R04018 RC00028,RC00077 ko00000,ko00001,ko01000,ko02042 - GH33 - BNR_2,BNR_3,BNR_assoc_N BECNEDJF_01047 411477.PARMER_00289 4.84e-258 721.0 COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,2FPVR@200643|Bacteroidia,22ZGP@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-fucosidase - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc BECNEDJF_01048 411477.PARMER_00290 0.0 1629.0 COG1874@1|root,COG1874@2|Bacteria,4NE2P@976|Bacteroidetes,2FN5P@200643|Bacteroidia,22WQT@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 35 - - 3.2.1.23 ko:K12308 ko00052,map00052 - R01105 RC00452 ko00000,ko00001,ko01000 - - - BetaGal_dom4_5,F5_F8_type_C,Glyco_hydro_35 BECNEDJF_01049 411477.PARMER_00291 0.0 1561.0 COG1554@1|root,COG1554@2|Bacteria,4NG60@976|Bacteroidetes,2FQZD@200643|Bacteroidia,230AM@171551|Porphyromonadaceae 976|Bacteroidetes G COG NOG04001 non supervised orthologous group - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 BECNEDJF_01050 547042.BACCOPRO_03139 2.77e-62 213.0 COG3250@1|root,COG3250@2|Bacteria,4NEP8@976|Bacteroidetes,2FMRW@200643|Bacteroidia,4AN63@815|Bacteroidaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_01051 411477.PARMER_03166 9.76e-244 682.0 COG0511@1|root,COG5016@1|root,COG0511@2|Bacteria,COG5016@2|Bacteria,4NEQV@976|Bacteroidetes,2FMXG@200643|Bacteroidia,22WMD@171551|Porphyromonadaceae 976|Bacteroidetes C Oxaloacetate decarboxylase - - 6.4.1.1 ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000 - - - Biotin_lipoyl,Biotin_lipoyl_2,HMGL-like,PYC_OADA BECNEDJF_01052 411477.PARMER_03165 8.1e-281 769.0 COG1883@1|root,COG1883@2|Bacteria,4NGCN@976|Bacteroidetes,2FNXC@200643|Bacteroidia,22WH7@171551|Porphyromonadaceae 976|Bacteroidetes C Na+-transporting oxaloacetate decarboxylase beta subunit - - 4.1.1.3 ko:K01572 ko00620,ko01100,map00620,map01100 - R00217 RC00040 ko00000,ko00001,ko01000,ko02000 3.B.1.1.1 - - OAD_beta BECNEDJF_01053 411477.PARMER_03164 0.0 1102.0 COG5107@1|root,COG5107@2|Bacteria,4NEPG@976|Bacteroidetes,2FNHC@200643|Bacteroidia,22WFC@171551|Porphyromonadaceae 976|Bacteroidetes A Domain of Unknown Function (DUF349) - - - - - - - - - - - - DUF349 BECNEDJF_01054 411477.PARMER_03163 3.7e-302 822.0 28TKX@1|root,2ZFUJ@2|Bacteria,4NKCT@976|Bacteroidetes,2G3EV@200643|Bacteroidia,22XSQ@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_01055 411477.PARMER_03202 0.0 954.0 COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,2FMD9@200643|Bacteroidia,22XFV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_01056 411477.PARMER_03201 0.0 1936.0 COG0841@1|root,COG0841@2|Bacteria,4NE3H@976|Bacteroidetes,2FN4H@200643|Bacteroidia,22WXN@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran BECNEDJF_01057 411477.PARMER_03200 1.47e-245 675.0 COG0845@1|root,COG0845@2|Bacteria,4NHJH@976|Bacteroidetes,2FP9C@200643|Bacteroidia,22VUH@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 BECNEDJF_01058 411477.PARMER_04148 3.41e-282 772.0 COG0673@1|root,COG0673@2|Bacteria,4NFFJ@976|Bacteroidetes,2FQ50@200643|Bacteroidia,22ZX6@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C BECNEDJF_01059 411477.PARMER_04147 8.3e-46 147.0 2EHKR@1|root,33BCH@2|Bacteria,4NXHF@976|Bacteroidetes,2FVUB@200643|Bacteroidia,23198@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01060 411477.PARMER_04145 0.0 1410.0 COG3533@1|root,COG3533@2|Bacteria,4NG7T@976|Bacteroidetes,2FPXE@200643|Bacteroidia,22WGE@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - - - - - - - - - - Glyco_hydro_127 BECNEDJF_01061 411477.PARMER_04144 0.0 1687.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,22X4F@171551|Porphyromonadaceae 976|Bacteroidetes T Y_Y_Y domain - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y BECNEDJF_01062 411477.PARMER_02399 3.04e-172 480.0 2ESC2@1|root,33JWV@2|Bacteria,4NXYV@976|Bacteroidetes,2FTKB@200643|Bacteroidia,23171@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01064 411477.PARMER_02397 0.0 885.0 COG1066@1|root,COG1066@2|Bacteria,4NEYA@976|Bacteroidetes,2FMRM@200643|Bacteroidia,22VX3@171551|Porphyromonadaceae 976|Bacteroidetes O DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function radA - - ko:K04485 - - - - ko00000,ko03400 - - - AAA_25,ATPase,ChlI BECNEDJF_01065 411477.PARMER_02396 1.68e-226 624.0 2AHY8@1|root,318BB@2|Bacteria,4NNZG@976|Bacteroidetes 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01066 411477.PARMER_02395 1.1e-120 345.0 COG4739@1|root,COG4739@2|Bacteria,4NPX4@976|Bacteroidetes,2FM7U@200643|Bacteroidia,22Y20@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterized protein containing a ferredoxin domain (DUF2148) - - - - - - - - - - - - DUF2148 BECNEDJF_01067 411477.PARMER_02394 6.05e-262 732.0 COG1509@1|root,COG1509@2|Bacteria,4NK6C@976|Bacteroidetes,2FMW5@200643|Bacteroidia,22X48@171551|Porphyromonadaceae 976|Bacteroidetes E KamA family eam - 5.4.3.2 ko:K01843 ko00310,map00310 - R00461 RC00303 ko00000,ko00001,ko01000 - - - - BECNEDJF_01068 471870.BACINT_03794 4.28e-127 366.0 COG3843@1|root,COG3843@2|Bacteria,4NH77@976|Bacteroidetes,2FM27@200643|Bacteroidia,4AKS5@815|Bacteroidaceae 976|Bacteroidetes U Relaxase mobilization nuclease domain protein - - - - - - - - - - - - Relaxase BECNEDJF_01069 763034.HMPREF9446_00355 1.73e-159 448.0 2DBFI@1|root,2Z8YS@2|Bacteria,4NHQD@976|Bacteroidetes,2FPG2@200643|Bacteroidia,4APFF@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_01070 763034.HMPREF9446_00357 1.13e-155 437.0 COG2968@1|root,COG2968@2|Bacteria,4NQGC@976|Bacteroidetes,2FQS9@200643|Bacteroidia,4AN2E@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF541) - - - ko:K09807 - - - - ko00000 - - - SIMPL BECNEDJF_01071 763034.HMPREF9446_00358 0.0 1373.0 COG0810@1|root,COG0810@2|Bacteria,4PN1N@976|Bacteroidetes,2G0P7@200643|Bacteroidia,4AQ8A@815|Bacteroidaceae 976|Bacteroidetes M TonB family domain protein - - - - - - - - - - - - TonB_C,WG_beta_rep BECNEDJF_01072 763034.HMPREF9446_00359 7.82e-195 544.0 COG4804@1|root,COG4804@2|Bacteria,4NGY8@976|Bacteroidetes,2FNJG@200643|Bacteroidia,4APER@815|Bacteroidaceae 976|Bacteroidetes S Protein of unknown function (DUF1016) - - - - - - - - - - - - DUF1016 BECNEDJF_01073 1235813.JCM10003_344 1.78e-147 420.0 COG4974@1|root,COG4974@2|Bacteria,4NIV4@976|Bacteroidetes,2FNQI@200643|Bacteroidia,4AMJM@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_01074 411477.PARMER_02199 3.04e-312 852.0 COG1538@1|root,COG1538@2|Bacteria,4NFTV@976|Bacteroidetes,2FMYV@200643|Bacteroidia,22XF0@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_01075 411477.PARMER_02200 0.0 1980.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FMG1@200643|Bacteroidia,22W2A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran BECNEDJF_01076 411477.PARMER_02201 2.8e-255 700.0 COG0845@1|root,COG0845@2|Bacteria,4NE7P@976|Bacteroidetes,2FPFR@200643|Bacteroidia,22WYZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - Biotin_lipoyl_2,HlyD_3 BECNEDJF_01077 1268240.ATFI01000008_gene2046 5.43e-147 420.0 COG2207@1|root,COG3449@1|root,COG2207@2|Bacteria,COG3449@2|Bacteria,4NRK7@976|Bacteroidetes,2G2TE@200643|Bacteroidia,4AW48@815|Bacteroidaceae 976|Bacteroidetes K Transcriptional regulator, effector binding domain protein - - - ko:K13652 - - - - ko00000,ko03000 - - - GyrI-like,HTH_18 BECNEDJF_01079 411477.PARMER_03829 9e-255 697.0 COG0079@1|root,COG0079@2|Bacteria,4NH43@976|Bacteroidetes,2FMAS@200643|Bacteroidia,22WAZ@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase - - 4.1.1.81 ko:K04720 ko00860,map00860 - R06530 RC00517 ko00000,ko00001,ko01000 - - - Aminotran_1_2 BECNEDJF_01080 411477.PARMER_03828 0.0 1888.0 COG1472@1|root,COG1680@1|root,COG1472@2|Bacteria,COG1680@2|Bacteria,4NET8@976|Bacteroidetes,2FN0V@200643|Bacteroidia,22WIJ@171551|Porphyromonadaceae 976|Bacteroidetes G hydrolase, family 3 nagA - - - - - - - - - - - Beta-lactamase,Glyco_hydro_3,Glyco_hydro_3_C BECNEDJF_01081 411477.PARMER_02212 1.06e-258 711.0 COG4219@1|root,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22W9Z@171551|Porphyromonadaceae 976|Bacteroidetes KT BlaR1 peptidase M56 - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C BECNEDJF_01082 411477.PARMER_02213 1.63e-82 246.0 COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,2FSIM@200643|Bacteroidia,22Y78@171551|Porphyromonadaceae 976|Bacteroidetes K Penicillinase repressor - - - - - - - - - - - - Penicillinase_R BECNEDJF_01083 411477.PARMER_02215 1.23e-192 535.0 2B69Q@1|root,31Z76@2|Bacteria,4P4FW@976|Bacteroidetes,2FTT6@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01084 411477.PARMER_02219 2.22e-60 186.0 COG0776@1|root,COG0776@2|Bacteria,4P9B5@976|Bacteroidetes 976|Bacteroidetes L Bacterial DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding BECNEDJF_01085 411477.PARMER_02220 3.81e-193 556.0 COG1506@1|root,COG1506@2|Bacteria,4NE2Q@976|Bacteroidetes,2FPZU@200643|Bacteroidia,22W8N@171551|Porphyromonadaceae 976|Bacteroidetes E Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - - - - - - - - - - DPPIV_N,Peptidase_S9 BECNEDJF_01086 411477.PARMER_01992 1.61e-273 747.0 COG4299@1|root,COG4299@2|Bacteria,4NGKU@976|Bacteroidetes,2FQUY@200643|Bacteroidia,22ZR3@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5009) - - - - - - - - - - - - DUF5009 BECNEDJF_01087 411477.PARMER_01993 3.19e-114 326.0 2DWZ4@1|root,342MK@2|Bacteria,4P4DY@976|Bacteroidetes,2FT7K@200643|Bacteroidia,230NB@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01088 999419.HMPREF1077_03145 2.88e-244 676.0 COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,2FSBE@200643|Bacteroidia,22XPP@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF418) - - - ko:K07148 - - - - ko00000 - - - DUF1624,DUF418 BECNEDJF_01089 411477.PARMER_01997 4.76e-119 341.0 COG1704@1|root,COG1704@2|Bacteria,4NMP9@976|Bacteroidetes,2FRGD@200643|Bacteroidia,22YA9@171551|Porphyromonadaceae 976|Bacteroidetes S LemA family lemA - - ko:K03744 - - - - ko00000 - - - LemA BECNEDJF_01090 999419.HMPREF1077_03149 2.51e-198 553.0 COG0501@1|root,COG0501@2|Bacteria,4PIP6@976|Bacteroidetes,2FPH4@200643|Bacteroidia,22ZDM@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase family M48 htpX - - ko:K03799 - M00743 - - ko00000,ko00002,ko01000,ko01002 - - - Peptidase_M48 BECNEDJF_01091 411477.PARMER_02000 5.13e-288 786.0 COG0006@1|root,COG0006@2|Bacteria,4NJI0@976|Bacteroidetes,2FMKH@200643|Bacteroidia,22WGZ@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase M24 pepQ - 3.4.11.9,3.4.13.9 ko:K01262,ko:K01271 - - - - ko00000,ko01000,ko01002 - - - Creatinase_N,Peptidase_M24 BECNEDJF_01093 411477.PARMER_00161 0.0 1261.0 COG4704@1|root,COG4704@2|Bacteria,4NGPF@976|Bacteroidetes,2FNAC@200643|Bacteroidia,22WR4@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial Ig-like domain - - - - - - - - - - - - Big_5,fn3_3 BECNEDJF_01094 411477.PARMER_00160 0.0 888.0 28HQ3@1|root,2Z7XW@2|Bacteria,4NF9H@976|Bacteroidetes,2FPMP@200643|Bacteroidia,22VUD@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2851) - - - - - - - - - - - - DUF2851 BECNEDJF_01095 411477.PARMER_00159 1.4e-170 476.0 COG0289@1|root,COG0289@2|Bacteria,4NDX2@976|Bacteroidetes,2FNUW@200643|Bacteroidia,22VX2@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the DapB family dapB - 1.17.1.8 ko:K00215 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R04198,R04199 RC00478 ko00000,ko00001,ko00002,ko01000 - - - DapB_C,DapB_N BECNEDJF_01096 411477.PARMER_00158 0.0 975.0 COG0681@1|root,COG0681@2|Bacteria,4NFTP@976|Bacteroidetes,2FNMS@200643|Bacteroidia,22W4M@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the peptidase S26 family lepB - 3.4.21.89 ko:K03100 ko02024,ko03060,map02024,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_S24,Peptidase_S26 BECNEDJF_01097 411477.PARMER_00433 3.17e-184 512.0 COG1397@1|root,COG1397@2|Bacteria,4NGM2@976|Bacteroidetes,2G3CY@200643|Bacteroidia,22XRH@171551|Porphyromonadaceae 976|Bacteroidetes O ADP-ribosylglycohydrolase - - - - - - - - - - - - ADP_ribosyl_GH BECNEDJF_01098 999419.HMPREF1077_03587 3.03e-256 702.0 COG3049@1|root,COG3049@2|Bacteria,4NGDB@976|Bacteroidetes,2FPJ2@200643|Bacteroidia,22WSC@171551|Porphyromonadaceae 976|Bacteroidetes M Linear amide C-N hydrolases, choloylglycine hydrolase family - - 3.5.1.24 ko:K01442 ko00120,ko00121,ko01100,map00120,map00121,map01100 - R02797,R03975,R03977,R04486,R04487,R05835 RC00090,RC00096 ko00000,ko00001,ko01000 - - - CBAH BECNEDJF_01099 411477.PARMER_00436 2.07e-192 532.0 COG0708@1|root,COG0708@2|Bacteria,4NEY3@976|Bacteroidetes,2FNRH@200643|Bacteroidia,22VZU@171551|Porphyromonadaceae 976|Bacteroidetes L exodeoxyribonuclease III xth - 3.1.11.2 ko:K01142 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Exo_endo_phos BECNEDJF_01100 411477.PARMER_00437 1.23e-229 632.0 COG0042@1|root,COG0042@2|Bacteria,4NFRH@976|Bacteroidetes,2FMTW@200643|Bacteroidia,22X5R@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines dus - - - - - - - - - - - Dus BECNEDJF_01101 411477.PARMER_00438 2.32e-160 449.0 COG0321@1|root,COG0321@2|Bacteria,4NE14@976|Bacteroidetes,2FMSJ@200643|Bacteroidia,22XNX@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate lipB - 2.3.1.181 ko:K03801 ko00785,ko01100,map00785,map01100 - R07766,R07769 RC00039,RC00992,RC02867 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB BECNEDJF_01102 411477.PARMER_00439 5.62e-186 518.0 COG0744@1|root,COG0744@2|Bacteria,4NF90@976|Bacteroidetes,2FN8I@200643|Bacteroidia,22WS1@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors mtgA - 2.4.1.129 ko:K03814 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01003,ko01011 - GT51 - Transgly BECNEDJF_01103 411477.PARMER_00440 1.89e-115 343.0 COG0477@1|root,COG0477@2|Bacteria,4PKTJ@976|Bacteroidetes,2FNZ0@200643|Bacteroidia,22W9K@171551|Porphyromonadaceae 976|Bacteroidetes EGP Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family - - - ko:K08138 - - - - ko00000,ko02000 2.A.1.1.3 - - Sugar_tr BECNEDJF_01104 411477.PARMER_02242 1.75e-181 505.0 COG1635@1|root,COG1635@2|Bacteria,4NJ8N@976|Bacteroidetes,2FMZW@200643|Bacteroidia,22Z30@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur thi4 - - ko:K03146 ko00730,ko01100,map00730,map01100 - R10685 RC00033,RC03253,RC03254 ko00000,ko00001 - - - Thi4 BECNEDJF_01105 411477.PARMER_02243 1.64e-151 426.0 COG1102@1|root,COG1102@2|Bacteria,4NN0M@976|Bacteroidetes,2G0H9@200643|Bacteroidia,22XVP@171551|Porphyromonadaceae 976|Bacteroidetes F Cytidylate kinase-like family - - - - - - - - - - - - Cytidylate_kin2 BECNEDJF_01106 411477.PARMER_02244 1.93e-307 839.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2FMX6@200643|Bacteroidia,22WP6@171551|Porphyromonadaceae 976|Bacteroidetes V Multidrug transporter MatE - - - - - - - - - - - - MatE BECNEDJF_01107 411477.PARMER_02245 5.44e-109 313.0 COG1956@1|root,COG1956@2|Bacteria,4NM6D@976|Bacteroidetes,2FS26@200643|Bacteroidia,22XVQ@171551|Porphyromonadaceae 976|Bacteroidetes T GAF domain msrC - 1.8.4.14 ko:K08968 ko00270,map00270 - R02025 RC00639 ko00000,ko00001,ko01000 - - - GAF,GAF_2 BECNEDJF_01108 411477.PARMER_02246 0.0 1449.0 COG2373@1|root,COG2373@2|Bacteria,4NEW9@976|Bacteroidetes,2FP6Z@200643|Bacteroidia,22WXY@171551|Porphyromonadaceae 976|Bacteroidetes S Alpha-2-Macroglobulin - - - ko:K06894 - - - - ko00000 - - - A2M,A2M_N,A2M_N_2,MG1,Thiol-ester_cl BECNEDJF_01109 411477.PARMER_00033 0.0 933.0 COG0446@1|root,COG0446@2|Bacteria,4NEK6@976|Bacteroidetes,2FT9Y@200643|Bacteroidia,22ZSH@171551|Porphyromonadaceae 976|Bacteroidetes S Pyridine nucleotide-disulphide oxidoreductase - - 1.8.5.4 ko:K17218 ko00920,map00920 - R10152 RC03155 ko00000,ko00001,ko01000 - - - Pyr_redox_2 BECNEDJF_01110 411477.PARMER_00034 0.0 1350.0 COG2825@1|root,COG2825@2|Bacteria,4PMUJ@976|Bacteroidetes,2G0GN@200643|Bacteroidia,22X9J@171551|Porphyromonadaceae 976|Bacteroidetes M helix_turn_helix, Lux Regulon - - - - - - - - - - - - Y_Y_Y BECNEDJF_01111 411477.PARMER_00035 0.0 1599.0 COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,2FMKD@200643|Bacteroidia,22X6E@171551|Porphyromonadaceae 976|Bacteroidetes EF Carbamoyl-phosphate synthetase large chain, oligomerisation domain carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS BECNEDJF_01112 411477.PARMER_01918 1.43e-203 564.0 COG0329@1|root,COG0329@2|Bacteria,4NFP9@976|Bacteroidetes,2FMFC@200643|Bacteroidia,22WYN@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) dapA - 4.3.3.7 ko:K01714 ko00261,ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00261,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R10147 RC03062,RC03063 ko00000,ko00001,ko00002,ko01000 - - - DHDPS BECNEDJF_01113 999419.HMPREF1077_03067 2.9e-109 315.0 2ENX1@1|root,33GHZ@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - BECNEDJF_01114 411477.PARMER_01920 0.0 1302.0 COG0272@1|root,COG0272@2|Bacteria,4NE2X@976|Bacteroidetes,2FKZZ@200643|Bacteroidia,22WHC@171551|Porphyromonadaceae 976|Bacteroidetes L DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA ligA GO:0003674,GO:0003824,GO:0003909,GO:0003911,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006259,GO:0006266,GO:0006281,GO:0006284,GO:0006288,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016874,GO:0016886,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0050896,GO:0051103,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 6.5.1.2 ko:K01972 ko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430 - R00382 RC00005 ko00000,ko00001,ko01000,ko03032,ko03400 - - - BRCT,DNA_ligase_OB,DNA_ligase_ZBD,DNA_ligase_aden,HHH_2,HHH_5 BECNEDJF_01115 411477.PARMER_01921 1.3e-236 650.0 28HM4@1|root,2Z7VS@2|Bacteria,4NGBW@976|Bacteroidetes,2FPDI@200643|Bacteroidia,22WES@171551|Porphyromonadaceae 976|Bacteroidetes S Putative carbohydrate metabolism domain - - - - - - - - - - - - PCMD BECNEDJF_01116 411477.PARMER_01922 3.25e-276 754.0 2BWJ3@1|root,2Z8E8@2|Bacteria,4NI7Z@976|Bacteroidetes,2FNX1@200643|Bacteroidia,22X7I@171551|Porphyromonadaceae 976|Bacteroidetes S Sulfotransferase family - - - - - - - - - - - - Sulfotransfer_3 BECNEDJF_01117 411477.PARMER_01923 9.84e-105 315.0 COG2895@1|root,COG2895@2|Bacteria,4NETI@976|Bacteroidetes,2FP06@200643|Bacteroidia,22X3Y@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN NodQ subfamily cysN GO:0006790,GO:0008150,GO:0008152,GO:0009987,GO:0044237 2.7.1.25,2.7.7.4 ko:K00955,ko:K00956 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00509,R00529,R04928,R04929 RC00002,RC00078,RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - APS_kinase,GTP_EFTU BECNEDJF_01118 411477.PARMER_01934 1.84e-105 304.0 COG0797@1|root,COG0797@2|Bacteria,4NSF1@976|Bacteroidetes,2FTUH@200643|Bacteroidia,230ZE@171551|Porphyromonadaceae 976|Bacteroidetes M Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides rlpA - - ko:K03642 - - - - ko00000 - - - DPBB_1 BECNEDJF_01119 411477.PARMER_01935 0.0 925.0 COG1858@1|root,COG1858@2|Bacteria,4NE4P@976|Bacteroidetes,2FMPS@200643|Bacteroidia 976|Bacteroidetes C Psort location Periplasmic, score ccp - 1.11.1.5 ko:K00428 - - - - ko00000,ko01000 - - - CCP_MauG,Cytochrom_C,Haem_bd BECNEDJF_01120 411477.PARMER_01936 1.19e-171 479.0 COG4464@1|root,COG4464@2|Bacteria,4NMUT@976|Bacteroidetes,2FNRW@200643|Bacteroidia,22YBK@171551|Porphyromonadaceae 976|Bacteroidetes GM COG4464 Capsular polysaccharide biosynthesis protein - - - - - - - - - - - - - BECNEDJF_01121 411477.PARMER_01937 0.0 1312.0 COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,2FM9K@200643|Bacteroidia,22W6W@171551|Porphyromonadaceae 976|Bacteroidetes DM Chain length determinant protein - - - - - - - - - - - - AAA_31,CbiA,GNVR,Wzz BECNEDJF_01123 411477.PARMER_02540 1.41e-140 397.0 COG0218@1|root,COG0218@2|Bacteria,4NEA9@976|Bacteroidetes,2FM4M@200643|Bacteroidia,22X2K@171551|Porphyromonadaceae 976|Bacteroidetes D Necessary for normal cell division and for the maintenance of normal septation engB - - ko:K03978 - - - - ko00000,ko03036 - - - MMR_HSR1 BECNEDJF_01124 411477.PARMER_02541 0.0 939.0 COG0591@1|root,COG0591@2|Bacteria,4NEF3@976|Bacteroidetes,2FM9G@200643|Bacteroidia,22WVH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - - - - - - - - - - SSF BECNEDJF_01125 411477.PARMER_02544 0.0 872.0 COG2385@1|root,COG2385@2|Bacteria,4NG21@976|Bacteroidetes,2FP4W@200643|Bacteroidia,22X5F@171551|Porphyromonadaceae 976|Bacteroidetes D Stage II sporulation protein lytB - - ko:K06381 - - - - ko00000 - - - DUF4922,Glycos_transf_2,SpoIID BECNEDJF_01126 411477.PARMER_02545 0.0 929.0 COG1297@1|root,COG1297@2|Bacteria,4NEIY@976|Bacteroidetes,2FN5W@200643|Bacteroidia,22W0A@171551|Porphyromonadaceae 976|Bacteroidetes S Peptide transporter - - - - - - - - - - - - OPT BECNEDJF_01127 411477.PARMER_01142 0.0 1313.0 COG1480@1|root,COG1480@2|Bacteria,4NEHV@976|Bacteroidetes,2FNT9@200643|Bacteroidia,22WDA@171551|Porphyromonadaceae 976|Bacteroidetes S 7TM receptor with intracellular HD hydrolase - - - ko:K07037 - - - - ko00000 - - - 7TM-7TMR_HD,7TMR-HDED,HD BECNEDJF_01128 411477.PARMER_01144 4.73e-118 337.0 COG0394@1|root,COG0394@2|Bacteria,4NNQZ@976|Bacteroidetes,2FM80@200643|Bacteroidia,22Y5T@171551|Porphyromonadaceae 976|Bacteroidetes T Belongs to the low molecular weight phosphotyrosine protein phosphatase family ptpA - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - LMWPc BECNEDJF_01129 411477.PARMER_01145 0.0 1606.0 COG1198@1|root,COG1198@2|Bacteria,4NFHB@976|Bacteroidetes,2FN6Z@200643|Bacteroidia,22WDT@171551|Porphyromonadaceae 976|Bacteroidetes L Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA priA - - ko:K04066 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,ResIII BECNEDJF_01130 411477.PARMER_03536 6.26e-234 645.0 COG0673@1|root,COG0673@2|Bacteria,4NFMS@976|Bacteroidetes,2FQ3R@200643|Bacteroidia,22W9S@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C BECNEDJF_01131 411477.PARMER_03535 0.0 2159.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22VUW@171551|Porphyromonadaceae 976|Bacteroidetes G beta-galactosidase lacZ - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_01132 411477.PARMER_03533 0.0 1123.0 COG1262@1|root,COG3005@1|root,COG1262@2|Bacteria,COG3005@2|Bacteria,4NEUZ@976|Bacteroidetes,2FQ5J@200643|Bacteroidia,22X2D@171551|Porphyromonadaceae 976|Bacteroidetes C NapC/NirT cytochrome c family, N-terminal region - - - - - - - - - - - - Cytochrom_NNT,FGE-sulfatase BECNEDJF_01133 411477.PARMER_03532 0.0 941.0 COG0673@1|root,COG0673@2|Bacteria,4NF9M@976|Bacteroidetes,2FMQW@200643|Bacteroidia,22XJJ@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,TAT_signal BECNEDJF_01134 411477.PARMER_03531 3.04e-231 635.0 COG1082@1|root,COG1082@2|Bacteria,4NHGW@976|Bacteroidetes,2FNTZ@200643|Bacteroidia,22X97@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2,TAT_signal BECNEDJF_01135 411477.PARMER_03530 8.15e-164 458.0 COG2846@1|root,COG2846@2|Bacteria,4NN29@976|Bacteroidetes,2FS5Z@200643|Bacteroidia,22XST@171551|Porphyromonadaceae 976|Bacteroidetes K Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - ko:K07322 - - - - ko00000 - - - GerE BECNEDJF_01136 411477.PARMER_03529 9.55e-127 361.0 COG2197@1|root,COG2197@2|Bacteria,4NSJ3@976|Bacteroidetes,2G2UZ@200643|Bacteroidia,22YE2@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, Lux Regulon - - - - - - - - - - - - GerE,PAS_3 BECNEDJF_01137 411477.PARMER_03528 0.0 1551.0 COG1629@1|root,COG4771@2|Bacteria,4PKE0@976|Bacteroidetes,2G3DW@200643|Bacteroidia,22VYA@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score 10.00 - - - ko:K02014 - - - - ko00000,ko02000 1.B.14 - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01138 411477.PARMER_03527 0.0 1417.0 COG4772@1|root,COG4772@2|Bacteria,4NF0U@976|Bacteroidetes,2FM7N@200643|Bacteroidia,2324B@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - Plug,TonB_dep_Rec BECNEDJF_01139 411477.PARMER_03526 9.13e-282 771.0 COG0477@1|root,COG2814@2|Bacteria,4NHVY@976|Bacteroidetes,2FP43@200643|Bacteroidia,22WSI@171551|Porphyromonadaceae 976|Bacteroidetes EGP Acetyl-coenzyme A transporter 1 - - - - - - - - - - - - MFS_1 BECNEDJF_01140 411477.PARMER_03525 0.0 930.0 COG0635@1|root,COG0635@2|Bacteria,4NEY5@976|Bacteroidetes,2FMT8@200643|Bacteroidia,22XEF@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the anaerobic coproporphyrinogen-III oxidase family hemN - - - - - - - - - - - HemN_C,Radical_SAM BECNEDJF_01141 411477.PARMER_03524 0.0 903.0 COG1232@1|root,COG1232@2|Bacteria,4NH1E@976|Bacteroidetes,2FPZ0@200643|Bacteroidia,22X7Z@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX hemG - 1.3.3.15,1.3.3.4 ko:K00231 ko00860,ko01100,ko01110,map00860,map01100,map01110 M00121 R03222,R04178 RC00885 ko00000,ko00001,ko00002,ko01000 - - - Amino_oxidase BECNEDJF_01142 411477.PARMER_03523 1.33e-82 244.0 2DSC2@1|root,33FFW@2|Bacteria,4NZRV@976|Bacteroidetes,2FVN1@200643|Bacteroidia,2312D@171551|Porphyromonadaceae 976|Bacteroidetes S Putative prokaryotic signal transducing protein - - - - - - - - - - - - DUF2007 BECNEDJF_01143 411477.PARMER_03522 1.2e-33 115.0 2ESUT@1|root,33KD7@2|Bacteria,4NZK5@976|Bacteroidetes,2FUTN@200643|Bacteroidia,22YYH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01144 411477.PARMER_03521 0.0 897.0 COG0334@1|root,COG0334@2|Bacteria,4NEBH@976|Bacteroidetes,2FM43@200643|Bacteroidia,22XFA@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the Glu Leu Phe Val dehydrogenases family gdhA GO:0003674,GO:0003824,GO:0004353,GO:0004354,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006536,GO:0006537,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016491,GO:0016638,GO:0016639,GO:0019752,GO:0043436,GO:0043648,GO:0043650,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.4.1.4 ko:K00262 ko00220,ko00250,ko00910,ko01100,map00220,map00250,map00910,map01100 - R00248 RC00006,RC02799 ko00000,ko00001,ko01000 - - - ELFV_dehydrog,ELFV_dehydrog_N BECNEDJF_01145 411477.PARMER_03519 0.0 979.0 COG1660@1|root,COG3178@1|root,COG1660@2|Bacteria,COG3178@2|Bacteria,4NIT0@976|Bacteroidetes,2FMEM@200643|Bacteroidia,22VZD@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphotransferase enzyme family - - - - - - - - - - - - APH,ATP_bind_2 BECNEDJF_01146 411477.PARMER_03518 3.85e-180 501.0 COG1208@1|root,COG1208@2|Bacteria,4NMJ5@976|Bacteroidetes,2FNEE@200643|Bacteroidia,22XKJ@171551|Porphyromonadaceae 976|Bacteroidetes JM COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits (eIF-2Bgamma eIF-2Bepsilon) hddC - - - - - - - - - - - NTP_transferase BECNEDJF_01147 411477.PARMER_03516 4.96e-133 377.0 COG1595@1|root,COG1595@2|Bacteria,4NNDJ@976|Bacteroidetes,2FS0B@200643|Bacteroidia,23043@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_01148 411477.PARMER_03515 1.47e-242 666.0 COG3712@1|root,COG3712@2|Bacteria,4NICU@976|Bacteroidetes,2FPP5@200643|Bacteroidia,22XPI@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01149 1235803.C825_03452 0.0 1777.0 COG1629@1|root,COG4774@1|root,COG1629@2|Bacteria,COG4774@2|Bacteria,4PKAS@976|Bacteroidetes,2FWM7@200643|Bacteroidia,23011@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug BECNEDJF_01150 411477.PARMER_03511 0.0 1045.0 COG4198@1|root,COG4198@2|Bacteria,4NEQC@976|Bacteroidetes,2FPUQ@200643|Bacteroidia 976|Bacteroidetes S Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like_2 BECNEDJF_01152 411477.PARMER_01439 4.52e-301 821.0 COG0739@1|root,COG0739@2|Bacteria,4NECF@976|Bacteroidetes,2FQ2Q@200643|Bacteroidia,22X4J@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 BECNEDJF_01153 411477.PARMER_01440 9.61e-84 247.0 COG3304@1|root,COG3304@2|Bacteria,4NQSS@976|Bacteroidetes,2FTAX@200643|Bacteroidia,22Y70@171551|Porphyromonadaceae 976|Bacteroidetes S Inner membrane component domain yccF - - - - - - - - - - - YccF BECNEDJF_01154 411477.PARMER_01441 6.45e-204 563.0 COG0796@1|root,COG0796@2|Bacteria,4NG1C@976|Bacteroidetes,2FKYW@200643|Bacteroidia,22WDQ@171551|Porphyromonadaceae 976|Bacteroidetes M Provides the (R)-glutamate required for cell wall biosynthesis murI - 5.1.1.3 ko:K01776 ko00471,ko01100,map00471,map01100 - R00260 RC00302 ko00000,ko00001,ko01000,ko01011 - - - Asp_Glu_race BECNEDJF_01155 411477.PARMER_01442 2.66e-88 262.0 COG2825@1|root,COG2825@2|Bacteria,4NSCM@976|Bacteroidetes,2FQ15@200643|Bacteroidia,2321M@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein (OmpH-like) ompH - - ko:K06142 - - - - ko00000 - - - OmpH BECNEDJF_01156 411477.PARMER_01443 3.43e-112 323.0 COG2825@1|root,COG2825@2|Bacteria,4NH46@976|Bacteroidetes,2FQDW@200643|Bacteroidia,22XM9@171551|Porphyromonadaceae 976|Bacteroidetes M membrane ompH - - ko:K06142 - - - - ko00000 - - - OmpH BECNEDJF_01157 411477.PARMER_01445 0.0 950.0 COG4775@1|root,COG4775@2|Bacteria,4NE6Z@976|Bacteroidetes,2FM76@200643|Bacteroidia,22WYU@171551|Porphyromonadaceae 976|Bacteroidetes M membrane yaeT - - ko:K07277 - - - - ko00000,ko02000,ko03029 1.B.33 - - Bac_surface_Ag,POTRA BECNEDJF_01158 411477.PARMER_02153 5.56e-312 848.0 COG0436@1|root,COG0436@2|Bacteria,4NFWS@976|Bacteroidetes,2FMMU@200643|Bacteroidia,22WC2@171551|Porphyromonadaceae 976|Bacteroidetes E Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL-diaminopimelate dapL - 2.6.1.83 ko:K10206 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 M00527 R07613 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_01159 411477.PARMER_02152 1.15e-195 542.0 COG0253@1|root,COG0253@2|Bacteria,4NF26@976|Bacteroidetes,2FNI4@200643|Bacteroidia,22WSU@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan dapF - 5.1.1.7 ko:K01778 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00527 R02735 RC00302 ko00000,ko00001,ko00002,ko01000 - - - DAP_epimerase BECNEDJF_01160 411477.PARMER_02151 0.0 1134.0 COG3408@1|root,COG3408@2|Bacteria,4NHCI@976|Bacteroidetes,2FWPV@200643|Bacteroidia 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain - - - - - - - - - - - - Bac_rhamnosid6H BECNEDJF_01161 411477.PARMER_02149 0.0 2385.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22WQH@171551|Porphyromonadaceae 976|Bacteroidetes G Beta galactosidase small chain - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N,RicinB_lectin_2 BECNEDJF_01162 411477.PARMER_02148 7.04e-79 234.0 COG1917@1|root,COG1917@2|Bacteria,4NSEB@976|Bacteroidetes,2FSS8@200643|Bacteroidia,22YCB@171551|Porphyromonadaceae 976|Bacteroidetes S Cupin domain - - - - - - - - - - - - Cupin_2 BECNEDJF_01163 411477.PARMER_02147 9.78e-185 513.0 2CC7R@1|root,334IS@2|Bacteria,4NX6W@976|Bacteroidetes,2FVDG@200643|Bacteroidia,231B8@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4469) with IG-like fold - - - - - - - - - - - - DUF4469,HU-DNA_bdg BECNEDJF_01164 411477.PARMER_02146 0.0 1292.0 COG4886@1|root,COG4886@2|Bacteria,4P4WY@976|Bacteroidetes,2FU2X@200643|Bacteroidia 976|Bacteroidetes S COG NOG38840 non supervised orthologous group - - - - - - - - - - - - DUF4988,LRR_5 BECNEDJF_01165 999419.HMPREF1077_02548 0.0 1103.0 COG0367@1|root,COG0367@2|Bacteria,4NFQ3@976|Bacteroidetes,2FNDJ@200643|Bacteroidia,22WTD@171551|Porphyromonadaceae 976|Bacteroidetes E Glutamine amidotransferase domain asnB - 6.3.5.4 ko:K01953 ko00250,ko01100,ko01110,map00250,map01100,map01110 - R00578 RC00010 ko00000,ko00001,ko01000,ko01002 - - - Asn_synthase,GATase_7 BECNEDJF_01166 411477.PARMER_02142 0.0 971.0 COG0493@1|root,COG0493@2|Bacteria,4NG9R@976|Bacteroidetes,2FN6R@200643|Bacteroidia,22W9Q@171551|Porphyromonadaceae 976|Bacteroidetes C Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster gltD - 1.4.1.13,1.4.1.14 ko:K00266 ko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230 - R00093,R00114,R00248 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - Fer4_20,Pyr_redox_2 BECNEDJF_01167 411477.PARMER_02141 0.0 2901.0 COG0067@1|root,COG0069@1|root,COG0070@1|root,COG0067@2|Bacteria,COG0069@2|Bacteria,COG0070@2|Bacteria,4NFKH@976|Bacteroidetes,2FNH9@200643|Bacteroidia,22W08@171551|Porphyromonadaceae 976|Bacteroidetes E GXGXG motif gltB - 1.4.1.13,1.4.1.14,1.4.7.1 ko:K00265,ko:K00284 ko00250,ko00630,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00630,map00910,map01100,map01110,map01120,map01130,map01230 - R00021,R00093,R00114,R00248,R10086 RC00006,RC00010,RC02799 ko00000,ko00001,ko01000 - - - GATase_2,GXGXG,Glu_syn_central,Glu_synthase BECNEDJF_01168 411477.PARMER_02140 0.0 974.0 COG4191@1|root,COG4191@2|Bacteria,4PMUW@976|Bacteroidetes,2G0H8@200643|Bacteroidia,230CI@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c BECNEDJF_01169 411477.PARMER_02138 0.0 3194.0 COG0210@1|root,COG0514@1|root,COG0210@2|Bacteria,COG0514@2|Bacteria,4NIAS@976|Bacteroidetes,2FP12@200643|Bacteroidia,22W5W@171551|Porphyromonadaceae 976|Bacteroidetes L DNA helicase - - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - AAA_19,DEAD,Helicase_C,UvrD-helicase,UvrD_C BECNEDJF_01170 411477.PARMER_02137 2.39e-127 361.0 COG1670@1|root,COG1670@2|Bacteria,4NNXN@976|Bacteroidetes,2FRMM@200643|Bacteroidia,22YA6@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_3 BECNEDJF_01172 411477.PARMER_02533 5.98e-265 743.0 COG0280@1|root,COG0281@1|root,COG0280@2|Bacteria,COG0281@2|Bacteria,4NFUJ@976|Bacteroidetes,2FM2T@200643|Bacteroidia,22VZR@171551|Porphyromonadaceae 976|Bacteroidetes C Malic enzyme maeB - 1.1.1.38,1.1.1.40 ko:K00027,ko:K00029 ko00620,ko00710,ko01100,ko01120,ko01200,ko02020,map00620,map00710,map01100,map01120,map01200,map02020 M00169,M00172 R00214,R00216 RC00105 ko00000,ko00001,ko00002,ko01000 - - - Malic_M,PTA_PTB,malic BECNEDJF_01173 999419.HMPREF1077_02609 0.0 956.0 COG0534@1|root,COG0534@2|Bacteria,4NH4G@976|Bacteroidetes,2FQ16@200643|Bacteroidia,22ZJW@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump mepA_7 - - - - - - - - - - - MatE BECNEDJF_01174 411477.PARMER_02531 3.92e-95 276.0 COG0545@1|root,COG0545@2|Bacteria,4P3V8@976|Bacteroidetes,2FTBJ@200643|Bacteroidia,230A2@171551|Porphyromonadaceae 976|Bacteroidetes O FKBP-type peptidyl-prolyl cis-trans isomerase mip - 5.2.1.8 ko:K01802 - - - - ko00000,ko01000 - - - FKBP_C BECNEDJF_01175 999419.HMPREF1077_02607 0.0 900.0 COG1538@1|root,COG1538@2|Bacteria,4NG1P@976|Bacteroidetes,2FMQB@200643|Bacteroidia,22WV8@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_01176 411477.PARMER_02529 1.06e-258 710.0 COG0845@1|root,COG0845@2|Bacteria,4NHV2@976|Bacteroidetes,2FPPF@200643|Bacteroidia,22WZX@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - - - - - - - - - - HlyD_D23 BECNEDJF_01177 411477.PARMER_00734 1.78e-98 294.0 COG4864@1|root,COG4864@2|Bacteria,4NGG6@976|Bacteroidetes,2FPNC@200643|Bacteroidia,22WRB@171551|Porphyromonadaceae 976|Bacteroidetes S UPF0365 protein - - - - - - - - - - - - YdfA_immunity BECNEDJF_01178 411477.PARMER_00733 3.88e-205 567.0 COG2820@1|root,COG2820@2|Bacteria,4NG5S@976|Bacteroidetes,2FM75@200643|Bacteroidia,22W39@171551|Porphyromonadaceae 976|Bacteroidetes F phosphorylase udp - 2.4.2.3 ko:K00757 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01876,R02484,R08229 RC00063 ko00000,ko00001,ko01000 - - - PNP_UDP_1 BECNEDJF_01179 411477.PARMER_00732 2.3e-172 481.0 COG0778@1|root,COG0778@2|Bacteria,4NJ80@976|Bacteroidetes,2FNX6@200643|Bacteroidia,22XFS@171551|Porphyromonadaceae 976|Bacteroidetes C Nitroreductase family - - 1.5.1.38,1.5.1.39 ko:K19285,ko:K19286 ko00740,ko01100,map00740,map01100 - R05705,R05706 RC00126 ko00000,ko00001,ko01000 - - - Nitroreductase BECNEDJF_01180 411477.PARMER_00731 1.34e-301 820.0 COG1373@1|root,COG1373@2|Bacteria,4NE3E@976|Bacteroidetes,2FP33@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - ko:K07133 - - - - ko00000 - - - AAA_14 BECNEDJF_01181 411477.PARMER_00730 3.04e-259 711.0 COG2768@1|root,COG2768@2|Bacteria,4NGYC@976|Bacteroidetes,2FPAI@200643|Bacteroidia,22X67@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of unknown function (DUF362) - - - ko:K07138 - - - - ko00000 - - - DUF362,Fer4 BECNEDJF_01183 411477.PARMER_01332 0.0 2487.0 COG0085@1|root,COG0085@2|Bacteria,4NF8D@976|Bacteroidetes,2FMDI@200643|Bacteroidia,22X4R@171551|Porphyromonadaceae 976|Bacteroidetes K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoB - 2.7.7.6 ko:K03043 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb2_1,RNA_pol_Rpb2_2,RNA_pol_Rpb2_3,RNA_pol_Rpb2_45,RNA_pol_Rpb2_6,RNA_pol_Rpb2_7 BECNEDJF_01184 411477.PARMER_01333 6.3e-61 189.0 COG0222@1|root,COG0222@2|Bacteria,4NQAQ@976|Bacteroidetes,2FSJH@200643|Bacteroidia,22Y4T@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation rplL - - ko:K02935 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L12,Ribosomal_L12_N BECNEDJF_01185 411477.PARMER_01334 1.56e-115 332.0 COG0244@1|root,COG0244@2|Bacteria,4NFFK@976|Bacteroidetes,2FSBB@200643|Bacteroidia,22XXG@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors rplJ - - ko:K02864 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L10 BECNEDJF_01186 411477.PARMER_01335 1.01e-159 448.0 COG0081@1|root,COG0081@2|Bacteria,4NEIC@976|Bacteroidetes,2FNKI@200643|Bacteroidia,22X02@171551|Porphyromonadaceae 976|Bacteroidetes J Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release rplA GO:0000470,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015934,GO:0016070,GO:0016072,GO:0019538,GO:0022613,GO:0022625,GO:0022626,GO:0032991,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02863 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L1 BECNEDJF_01187 435591.BDI_2268 9.41e-42 139.0 COG0080@1|root,COG0080@2|Bacteria,4NM60@976|Bacteroidetes,2FRYX@200643|Bacteroidia,22XQN@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors rplK - - ko:K02867 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L11,Ribosomal_L11_N BECNEDJF_01188 999419.HMPREF1077_02000 3.19e-60 187.0 2ERVA@1|root,33JEG@2|Bacteria,4NYF4@976|Bacteroidetes,2FW34@200643|Bacteroidia,22Z1V@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01190 411477.PARMER_03327 2.27e-119 340.0 COG1705@1|root,COG1705@2|Bacteria 2|Bacteria NU amidase activity - - - ko:K02395 - - - - ko00000,ko02035 - - - Glucosaminidase,Rod-binding BECNEDJF_01191 1235803.C825_01700 1.61e-44 144.0 298PA@1|root,2ZQYC@2|Bacteria,4P7SE@976|Bacteroidetes,2FVBS@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 BECNEDJF_01192 411477.PARMER_03325 1.31e-98 286.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - Bac_DNA_binding BECNEDJF_01193 411477.PARMER_03322 0.0 1503.0 COG0358@1|root,COG5545@1|root,COG0358@2|Bacteria,COG5545@2|Bacteria,4NETK@976|Bacteroidetes,2FR42@200643|Bacteroidia,2303P@171551|Porphyromonadaceae 976|Bacteroidetes L Protein of unknown function (DUF3987) - - - - - - - - - - - - DUF3987,PriCT_1,VirE_N BECNEDJF_01196 411477.PARMER_02254 0.0 929.0 COG3291@1|root,COG3291@2|Bacteria,4NU2U@976|Bacteroidetes,2FNZM@200643|Bacteroidia,22XX6@171551|Porphyromonadaceae 976|Bacteroidetes S C-terminal domain of CHU protein family - - - - - - - - - - - - CHU_C BECNEDJF_01197 411477.PARMER_02256 0.0 901.0 COG1109@1|root,COG1109@2|Bacteria,4NG3H@976|Bacteroidetes,2FM6E@200643|Bacteroidia,22W7N@171551|Porphyromonadaceae 976|Bacteroidetes G Phosphoglucosamine mutase glmM - 5.4.2.8 ko:K01840 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01818 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV BECNEDJF_01198 411477.PARMER_02257 4.41e-137 387.0 2BU91@1|root,32PII@2|Bacteria,4NS5T@976|Bacteroidetes,2G1SX@200643|Bacteroidia,2318V@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4827) - - - - - - - - - - - - DUF4827 BECNEDJF_01199 411477.PARMER_02258 4.4e-260 712.0 COG0618@1|root,COG0618@2|Bacteria,4NEXE@976|Bacteroidetes,2FP4J@200643|Bacteroidia,22VYP@171551|Porphyromonadaceae 976|Bacteroidetes S domain protein nrnA - 3.1.13.3,3.1.3.7 ko:K06881 ko00920,ko01100,ko01120,map00920,map01100,map01120 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03400 - - - DHH,DHHA1 BECNEDJF_01200 1121098.HMPREF1534_03622 6.16e-21 82.4 COG0582@1|root,COG0582@2|Bacteria,4P74I@976|Bacteroidetes,2FUM2@200643|Bacteroidia,4ASFP@815|Bacteroidaceae 976|Bacteroidetes L viral genome integration into host DNA - - - - - - - - - - - - - BECNEDJF_01201 1121098.HMPREF1534_03623 6.61e-100 289.0 COG0582@1|root,COG0582@2|Bacteria,4NZT1@976|Bacteroidetes,2FQKG@200643|Bacteroidia,4AK77@815|Bacteroidaceae 976|Bacteroidetes L viral genome integration into host DNA - - - - - - - - - - - - - BECNEDJF_01202 1121098.HMPREF1534_03624 1.89e-78 235.0 COG0716@1|root,COG0716@2|Bacteria,4NNTA@976|Bacteroidetes,2FST2@200643|Bacteroidia,4AQ9R@815|Bacteroidaceae 976|Bacteroidetes C Flavodoxin - - - - - - - - - - - - Flavodoxin_4 BECNEDJF_01203 226186.BT_1114 1.51e-262 717.0 COG1075@1|root,COG1075@2|Bacteria,4NFSV@976|Bacteroidetes,2FNWB@200643|Bacteroidia,4AQB4@815|Bacteroidaceae 976|Bacteroidetes S Alpha beta hydrolase - - - - - - - - - - - - Abhydrolase_6 BECNEDJF_01204 1121098.HMPREF1534_03626 3.76e-289 788.0 COG0667@1|root,COG0667@2|Bacteria,4NEB0@976|Bacteroidetes,2FMYE@200643|Bacteroidia,4AKB2@815|Bacteroidaceae 976|Bacteroidetes C aldo keto reductase - - - - - - - - - - - - Aldo_ket_red,TAT_signal BECNEDJF_01205 1121098.HMPREF1534_03627 7.96e-127 361.0 COG1661@1|root,COG1661@2|Bacteria,4NQI9@976|Bacteroidetes,2FN87@200643|Bacteroidia,4AQ4U@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF296) - - - ko:K06934 - - - - ko00000 - - - DUF296 BECNEDJF_01206 411477.PARMER_02591 2.8e-207 580.0 COG1010@1|root,COG2082@1|root,COG1010@2|Bacteria,COG2082@2|Bacteria,4NIR7@976|Bacteroidetes,2FP3F@200643|Bacteroidia,22WHE@171551|Porphyromonadaceae 976|Bacteroidetes H Precorrin-3B C(17)-methyltransferase cobJ - 5.4.99.60,5.4.99.61 ko:K06042 ko00860,ko01100,map00860,map01100 - R05177,R05814 RC01292,RC01980 ko00000,ko00001,ko01000 - - - CbiC,TP_methylase BECNEDJF_01207 411477.PARMER_02590 4.97e-311 846.0 COG2241@1|root,COG2242@1|root,COG2241@2|Bacteria,COG2242@2|Bacteria,4NFV9@976|Bacteroidetes,2FMN0@200643|Bacteroidia,22WEE@171551|Porphyromonadaceae 976|Bacteroidetes H Precorrin-6y C5,15-methyltransferase (Decarboxylating), CbiE subunit cbiE - 2.1.1.132 ko:K00595 ko00860,ko01100,map00860,map01100 - R05149 RC00003,RC01279 ko00000,ko00001,ko01000 - - - Methyltransf_2,TP_methylase BECNEDJF_01208 411477.PARMER_02589 0.0 1271.0 COG2073@1|root,COG2875@1|root,COG2073@2|Bacteria,COG2875@2|Bacteria,4PKDZ@976|Bacteroidetes,2FNMI@200643|Bacteroidia,22W86@171551|Porphyromonadaceae 976|Bacteroidetes H Cobalamin biosynthesis protein CbiG cobM - 2.1.1.133,2.1.1.271 ko:K05936 ko00860,ko01100,map00860,map01100 - R05181,R05810 RC00003,RC01294,RC02049 ko00000,ko00001,ko01000 - - - CbiG_C,CbiG_N,CbiG_mid,TP_methylase BECNEDJF_01210 411477.PARMER_02404 0.0 1788.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,231P8@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01211 411477.PARMER_02405 0.0 1001.0 COG0702@1|root,COG0702@2|Bacteria,4NKQ1@976|Bacteroidetes,2FR0T@200643|Bacteroidia,230DG@171551|Porphyromonadaceae 976|Bacteroidetes GM SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_01212 411477.PARMER_02406 5.49e-307 835.0 COG4225@1|root,COG4225@2|Bacteria,4NDYS@976|Bacteroidetes,2FM61@200643|Bacteroidia,22XA8@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 BECNEDJF_01213 999419.HMPREF1077_01845 2.84e-205 567.0 COG2207@1|root,COG2207@2|Bacteria,4P2DJ@976|Bacteroidetes,2FNWY@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 BECNEDJF_01214 411477.PARMER_00081 0.0 1063.0 COG1649@1|root,COG1649@2|Bacteria,4NFKQ@976|Bacteroidetes,2FMPU@200643|Bacteroidia,22W1J@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl hydrolase-like 10 - - - - - - - - - - - - GHL10 BECNEDJF_01215 411477.PARMER_00737 5.42e-150 423.0 COG0037@1|root,COG0037@2|Bacteria,4NIQB@976|Bacteroidetes,2FP5K@200643|Bacteroidia,22X1Q@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the TtcA family ttcA - - ko:K14058 - - - - ko00000,ko03016 - - - ATP_bind_3 BECNEDJF_01216 411477.PARMER_00738 1.53e-85 251.0 COG3169@1|root,COG3169@2|Bacteria,4NQH4@976|Bacteroidetes,2FT44@200643|Bacteroidia,22Y4C@171551|Porphyromonadaceae 976|Bacteroidetes S Putative member of DMT superfamily (DUF486) - - - ko:K09922 - - - - ko00000 - - - DMT_6 BECNEDJF_01217 411477.PARMER_00739 2.03e-219 605.0 COG0324@1|root,COG0324@2|Bacteria,4NEAE@976|Bacteroidetes,2FNES@200643|Bacteroidia,22WDD@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT BECNEDJF_01218 411477.PARMER_00740 3.12e-129 367.0 29CCT@1|root,2ZZB9@2|Bacteria,4NM9K@976|Bacteroidetes,2FNRJ@200643|Bacteroidia,22Y1R@171551|Porphyromonadaceae 976|Bacteroidetes S Plasmid pRiA4b ORF-3-like protein - - - - - - - - - - - - PRiA4_ORF3 BECNEDJF_01219 411477.PARMER_00742 3.3e-152 431.0 COG1043@1|root,COG1043@2|Bacteria,4NEBA@976|Bacteroidetes,2FKYH@200643|Bacteroidia,22WE5@171551|Porphyromonadaceae 976|Bacteroidetes M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxA - 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Acetyltransf_11,Hexapep BECNEDJF_01220 999419.HMPREF1077_00574 0.0 906.0 COG0764@1|root,COG0774@1|root,COG0764@2|Bacteria,COG0774@2|Bacteria,4NEJ3@976|Bacteroidetes,2FM6X@200643|Bacteroidia,22X7C@171551|Porphyromonadaceae 976|Bacteroidetes IM Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis fabZ - 3.5.1.108,4.2.1.59 ko:K16363 ko00061,ko00540,ko01100,ko01212,map00061,map00540,map01100,map01212 M00060,M00083 R04428,R04535,R04537,R04544,R04568,R04587,R04954,R04965 RC00166,RC00300,RC00831,RC01095 ko00000,ko00001,ko00002,ko01000,ko01004,ko01005 - - - FabA,LpxC BECNEDJF_01221 411477.PARMER_00744 7.91e-85 261.0 COG1044@1|root,COG1044@2|Bacteria,4NE5G@976|Bacteroidetes,2FMZE@200643|Bacteroidia,22WC5@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxD - 2.3.1.191 ko:K02536 ko00540,ko01100,map00540,map01100 M00060 R04550 RC00039,RC00166 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hexapep,Hexapep_2,LpxD BECNEDJF_01222 411477.PARMER_00305 1.39e-311 850.0 COG1808@1|root,COG1808@2|Bacteria,4NDXI@976|Bacteroidetes,2FMJZ@200643|Bacteroidia,22X46@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - DUF389 BECNEDJF_01223 411477.PARMER_00304 0.0 1426.0 COG3591@1|root,COG3591@2|Bacteria,4NEAK@976|Bacteroidetes,2FMI1@200643|Bacteroidia,22W04@171551|Porphyromonadaceae 976|Bacteroidetes E peptidase dpp7 GO:0003674,GO:0003824,GO:0004177,GO:0005488,GO:0005575,GO:0005623,GO:0006508,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008239,GO:0009056,GO:0009279,GO:0009987,GO:0016020,GO:0016787,GO:0017171,GO:0019538,GO:0019867,GO:0030312,GO:0030313,GO:0031975,GO:0033218,GO:0034641,GO:0042277,GO:0043170,GO:0043171,GO:0043603,GO:0044237,GO:0044238,GO:0044248,GO:0044462,GO:0044464,GO:0070011,GO:0071704,GO:0071944,GO:0140096,GO:1901564,GO:1901565,GO:1901575 - - - - - - - - - - Peptidase_S46 BECNEDJF_01225 411477.PARMER_00991 2.22e-295 808.0 COG0534@1|root,COG0534@2|Bacteria,4NFIR@976|Bacteroidetes,2FMSA@200643|Bacteroidia,22X5G@171551|Porphyromonadaceae 976|Bacteroidetes V COG0534 Na -driven multidrug efflux pump - - - - - - - - - - - - MatE BECNEDJF_01226 411477.PARMER_00990 7.88e-79 234.0 COG0853@1|root,COG0853@2|Bacteria,4NQ42@976|Bacteroidetes,2FSH0@200643|Bacteroidia,22XW8@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine panD - 4.1.1.11 ko:K01579 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R00489 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Asp_decarbox BECNEDJF_01227 411477.PARMER_00989 5.97e-205 566.0 COG0414@1|root,COG0414@2|Bacteria,4NFT9@976|Bacteroidetes,2FN90@200643|Bacteroidia,22X8F@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate panC GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 6.3.2.1 ko:K01918 ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 M00119 R02473 RC00096,RC00141 ko00000,ko00001,ko00002,ko01000 - - - Pantoate_ligase BECNEDJF_01228 999419.HMPREF1077_00742 2.85e-208 575.0 COG0297@1|root,COG0297@2|Bacteria,4NFP8@976|Bacteroidetes,2FN7D@200643|Bacteroidia,22X24@171551|Porphyromonadaceae 976|Bacteroidetes G synthase glgA - 2.4.1.21 ko:K00703 ko00500,ko01100,ko01110,ko02026,map00500,map01100,map01110,map02026 M00565 R02421 RC00005 ko00000,ko00001,ko00002,ko01000,ko01003 - GT5 - Glyco_transf_5 BECNEDJF_01229 411477.PARMER_00968 0.0 897.0 28NG9@1|root,2ZCA6@2|Bacteria,4NMQX@976|Bacteroidetes,2G2BV@200643|Bacteroidia,22XUS@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4270) - - - - - - - - - - - - DUF4270 BECNEDJF_01230 411477.PARMER_00386 4.66e-266 738.0 COG2755@1|root,COG2755@2|Bacteria,4NEAZ@976|Bacteroidetes,2FM11@200643|Bacteroidia,22YB8@171551|Porphyromonadaceae 976|Bacteroidetes E N-terminus of Esterase_SGNH_hydro-type - - - - - - - - - - - - GxDLY,Lipase_GDSL_2,Lipase_GDSL_3 BECNEDJF_01231 411477.PARMER_00388 1.35e-192 533.0 COG1235@1|root,COG1235@2|Bacteria,4NDWB@976|Bacteroidetes,2FN0W@200643|Bacteroidia,22W69@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily lipB - 3.1.4.55 ko:K06167 ko00440,map00440 - R10205 RC00296 ko00000,ko00001,ko01000 - - - Lactamase_B_2 BECNEDJF_01232 411477.PARMER_00390 1.31e-244 671.0 COG0812@1|root,COG0812@2|Bacteria,4NE78@976|Bacteroidetes,2FN91@200643|Bacteroidia,22X7N@171551|Porphyromonadaceae 976|Bacteroidetes M Cell wall formation murB - 1.3.1.98 ko:K00075 ko00520,ko00550,ko01100,map00520,map00550,map01100 - R03191,R03192 RC02639 ko00000,ko00001,ko01000,ko01011 - - - FAD_binding_4,MurB_C BECNEDJF_01234 411477.PARMER_00392 3.52e-58 180.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding BECNEDJF_01235 411477.PARMER_00393 2.22e-151 426.0 COG0035@1|root,COG0035@2|Bacteria,4NFZM@976|Bacteroidetes,2FN3M@200643|Bacteroidia,22WRM@171551|Porphyromonadaceae 976|Bacteroidetes F uracil phosphoribosyltransferase upp - 2.4.2.9 ko:K00761 ko00240,ko01100,map00240,map01100 - R00966 RC00063 ko00000,ko00001,ko01000 - - - UPRTase BECNEDJF_01236 999419.HMPREF1077_03561 4.31e-185 536.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - GAF,GAF_2,HATPase_c,HisKA,PAS_3,PAS_8,PAS_9,Response_reg BECNEDJF_01238 411477.PARMER_01655 0.0 1531.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN93@200643|Bacteroidia,22WTA@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_01239 411477.PARMER_01656 8.73e-154 432.0 COG0176@1|root,COG0176@2|Bacteria,4NFVZ@976|Bacteroidetes,2FNM3@200643|Bacteroidia,22X0U@171551|Porphyromonadaceae 976|Bacteroidetes F Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway tal - 2.2.1.2 ko:K00616,ko:K08314 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01827 RC00439,RC00604 ko00000,ko00001,ko00002,ko01000 - - - TAL_FSA BECNEDJF_01240 411477.PARMER_01657 2.48e-36 122.0 COG1595@1|root,COG1595@2|Bacteria 2|Bacteria K DNA-templated transcription, initiation - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2,zf-HC2 BECNEDJF_01241 411477.PARMER_01658 1.36e-204 565.0 2C8MF@1|root,2ZKMZ@2|Bacteria,4P812@976|Bacteroidetes,2FVI1@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01242 411477.PARMER_01016 0.0 1909.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FNAJ@200643|Bacteroidia,22W8A@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - - - - - - - - - - ACR_tran,OEP BECNEDJF_01243 411477.PARMER_01015 2.01e-267 733.0 COG0845@1|root,COG0845@2|Bacteria,4NIDC@976|Bacteroidetes,2FM7T@200643|Bacteroidia,22WI4@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 BECNEDJF_01244 411477.PARMER_02710 4.74e-133 377.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,22YD2@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_01245 411477.PARMER_02708 2.74e-132 375.0 COG3059@1|root,COG3059@2|Bacteria,4NG9V@976|Bacteroidetes,2FMSP@200643|Bacteroidia,22Y9K@171551|Porphyromonadaceae 976|Bacteroidetes S membrane ykgB - - - - - - - - - - - DUF417 BECNEDJF_01246 411477.PARMER_02707 1.01e-135 384.0 COG0545@1|root,COG0545@2|Bacteria,4NVE8@976|Bacteroidetes,2FUUP@200643|Bacteroidia 976|Bacteroidetes M Peptidyl-prolyl cis-trans isomerase - - 5.2.1.8 ko:K01802,ko:K03773 - - - - ko00000,ko01000,ko03110 - - - FKBP_C BECNEDJF_01247 411477.PARMER_02706 0.0 1036.0 COG0423@1|root,COG0423@2|Bacteria,4NE1C@976|Bacteroidetes,2FMM2@200643|Bacteroidia,22WCA@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of glycine to tRNA(Gly) glyQS - 6.1.1.14 ko:K01880 ko00970,map00970 M00359,M00360 R03654 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - HGTP_anticodon,tRNA-synt_2b BECNEDJF_01248 411477.PARMER_02704 1.72e-96 292.0 COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,2FM8Y@200643|Bacteroidia,22WU2@171551|Porphyromonadaceae 976|Bacteroidetes C Dihydrolipoyl dehydrogenase lpdA - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim BECNEDJF_01249 411477.PARMER_00706 5.27e-206 569.0 COG3669@1|root,COG3669@2|Bacteria,4NE74@976|Bacteroidetes,2FPVW@200643|Bacteroidia,22VX8@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-fucosidase fucA - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos BECNEDJF_01250 411477.PARMER_00708 0.0 2619.0 COG2865@1|root,COG2865@2|Bacteria,4NZR7@976|Bacteroidetes,2FRAI@200643|Bacteroidia,22YW1@171551|Porphyromonadaceae 976|Bacteroidetes K Putative DNA-binding domain - - - - - - - - - - - - AlbA_2 BECNEDJF_01251 411477.PARMER_04340 3.78e-219 615.0 COG5002@1|root,COG5002@2|Bacteria,4NDTV@976|Bacteroidetes,2FP04@200643|Bacteroidia,22W6T@171551|Porphyromonadaceae 976|Bacteroidetes T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain covS - - - - - - - - - - - 4HB_MCP_1,HAMP,HATPase_c,HisKA,PAS BECNEDJF_01252 411477.PARMER_04341 4.04e-315 858.0 COG0527@1|root,COG0527@2|Bacteria,4NFWR@976|Bacteroidetes,2FMTV@200643|Bacteroidia,22X04@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the aspartokinase family lysC - 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase BECNEDJF_01253 411477.PARMER_04343 8.69e-313 852.0 COG0312@1|root,COG0312@2|Bacteria,4NE1F@976|Bacteroidetes,2FPXY@200643|Bacteroidia,22X4I@171551|Porphyromonadaceae 976|Bacteroidetes S Putative modulator of DNA gyrase tldD3 - - ko:K03592 - - - - ko00000,ko01002 - - - PmbA_TldD BECNEDJF_01254 411477.PARMER_04344 0.0 1016.0 COG0312@1|root,COG0312@2|Bacteria,4NG2Y@976|Bacteroidetes,2FN09@200643|Bacteroidia,22X19@171551|Porphyromonadaceae 976|Bacteroidetes S Putative modulator of DNA gyrase tldD1 - - ko:K03568 - - - - ko00000,ko01002 - - - PmbA_TldD BECNEDJF_01256 880074.BARVI_11735 0.0 1056.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMCU@200643|Bacteroidia,22WMW@171551|Porphyromonadaceae 976|Bacteroidetes G hydrolase, family 3 bglB_3 GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0008422,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015926,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C BECNEDJF_01257 657309.BXY_21860 8.43e-189 537.0 28JT8@1|root,2Z9IJ@2|Bacteria,4NI1G@976|Bacteroidetes,2FMT2@200643|Bacteroidia,4AP1V@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - TIG BECNEDJF_01258 694427.Palpr_2555 2e-158 461.0 COG4198@1|root,COG4198@2|Bacteria,4NEAX@976|Bacteroidetes,2G3H9@200643|Bacteroidia,22YH5@171551|Porphyromonadaceae 976|Bacteroidetes S Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like,SusD-like_2 BECNEDJF_01259 411477.PARMER_03299 0.0 1049.0 COG0539@1|root,COG1185@1|root,COG0539@2|Bacteria,COG1185@2|Bacteria,4NDW9@976|Bacteroidetes,2FNZK@200643|Bacteroidia,22WN9@171551|Porphyromonadaceae 976|Bacteroidetes J thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence rpsA - - ko:K02945 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - S1 BECNEDJF_01260 411477.PARMER_03300 1.45e-55 173.0 2FFF9@1|root,347CS@2|Bacteria,4P64C@976|Bacteroidetes,2FTYY@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_01261 411477.PARMER_03302 1.16e-85 253.0 COG0745@1|root,COG0745@2|Bacteria,4PMV4@976|Bacteroidetes,2G0HF@200643|Bacteroidia,231PB@171551|Porphyromonadaceae 976|Bacteroidetes T cheY-homologous receiver domain - - - - - - - - - - - - Response_reg BECNEDJF_01262 411477.PARMER_03303 2.45e-58 180.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - ko:K03530 - - - - ko00000,ko03032,ko03036,ko03400 - - - Bac_DNA_binding BECNEDJF_01264 999419.HMPREF1077_02023 1.32e-248 683.0 COG0337@1|root,COG0337@2|Bacteria,4NGSS@976|Bacteroidetes,2FNVM@200643|Bacteroidia,22VVS@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ) aroB - 4.2.3.4 ko:K01735 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03083 RC00847 ko00000,ko00001,ko00002,ko01000 - - - DHQ_synthase BECNEDJF_01265 411477.PARMER_03308 5.31e-165 486.0 COG0013@1|root,COG0013@2|Bacteria,4NFHW@976|Bacteroidetes,2FN1R@200643|Bacteroidia,22XC2@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain alaS GO:0003674,GO:0003824,GO:0004812,GO:0004813,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006412,GO:0006418,GO:0006419,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016597,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0031406,GO:0034470,GO:0034641,GO:0034645,GO:0034660,GO:0036094,GO:0043038,GO:0043039,GO:0043043,GO:0043167,GO:0043168,GO:0043170,GO:0043177,GO:0043412,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.7 ko:K01872 ko00970,map00970 M00359,M00360 R03038 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DHHA1,tRNA-synt_2c,tRNA_SAD BECNEDJF_01266 411477.PARMER_03376 5.83e-100 290.0 COG0757@1|root,COG0757@2|Bacteria,4NNHU@976|Bacteroidetes,2FR57@200643|Bacteroidia,22XWF@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes a trans-dehydration via an enolate intermediate aroQ - 4.2.1.10 ko:K03786 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03084 RC00848 ko00000,ko00001,ko00002,ko01000 - - - DHquinase_II BECNEDJF_01267 411477.PARMER_03375 0.0 944.0 COG0469@1|root,COG0469@2|Bacteria,4NEEU@976|Bacteroidetes,2FNU3@200643|Bacteroidia,22WAP@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the pyruvate kinase family pyk - 2.7.1.40 ko:K00873 ko00010,ko00230,ko00620,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04922,ko04930,ko05165,ko05203,ko05230,map00010,map00230,map00620,map01100,map01110,map01120,map01130,map01200,map01230,map04922,map04930,map05165,map05203,map05230 M00001,M00002,M00049,M00050 R00200,R00430,R01138,R01858,R02320 RC00002,RC00015 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - PK,PK_C BECNEDJF_01268 411477.PARMER_03374 1.45e-147 415.0 COG4122@1|root,COG4122@2|Bacteria,4NH42@976|Bacteroidetes,2FM5S@200643|Bacteroidia,22WC1@171551|Porphyromonadaceae 976|Bacteroidetes S O-Methyltransferase - - 2.1.1.104 ko:K00588 ko00360,ko00940,ko00941,ko00945,ko01100,ko01110,map00360,map00940,map00941,map00945,map01100,map01110 M00039,M00350 R01942,R06578 RC00003,RC00392 ko00000,ko00001,ko00002,ko01000 - - - Methyltransf_3 BECNEDJF_01269 411477.PARMER_03373 2.67e-69 209.0 COG0858@1|root,COG0858@2|Bacteria,4NSQJ@976|Bacteroidetes,2FT27@200643|Bacteroidia,22YGP@171551|Porphyromonadaceae 976|Bacteroidetes J One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA rbfA - - ko:K02834 - - - - ko00000,ko03009 - - - RBFA BECNEDJF_01270 999419.HMPREF1077_01959 6.09e-276 757.0 COG4591@1|root,COG4591@2|Bacteria,4NG04@976|Bacteroidetes,2FNHB@200643|Bacteroidia,22X1B@171551|Porphyromonadaceae 976|Bacteroidetes M Efflux ABC transporter, permease protein lolE - - ko:K09808,ko:K09815 ko02010,map02010 M00242,M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125,3.A.1.15.3,3.A.1.15.5 - - FtsX,MacB_PCD BECNEDJF_01272 411477.PARMER_03445 1.09e-66 202.0 2F2PS@1|root,33VK7@2|Bacteria,4P2ZT@976|Bacteroidetes,2FSYE@200643|Bacteroidia,230PR@171551|Porphyromonadaceae 976|Bacteroidetes S Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5 BECNEDJF_01274 411477.PARMER_03447 4.88e-283 773.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase - - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 BECNEDJF_01275 411477.PARMER_03448 3.38e-295 804.0 COG0438@1|root,COG0438@2|Bacteria,4NGU7@976|Bacteroidetes,2FS6M@200643|Bacteroidia 976|Bacteroidetes M Glycosyl transferase 4-like domain - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glycos_transf_1 BECNEDJF_01276 411477.PARMER_03449 0.0 1064.0 COG5360@1|root,COG5360@2|Bacteria,4NHMA@976|Bacteroidetes,2G2Q8@200643|Bacteroidia,2313F@171551|Porphyromonadaceae 976|Bacteroidetes S Heparinase II/III N-terminus - - - - - - - - - - - - Hepar_II_III,Hepar_II_III_N BECNEDJF_01277 411477.PARMER_01803 3.07e-210 582.0 COG0053@1|root,COG0053@2|Bacteria,4NEID@976|Bacteroidetes,2FNNF@200643|Bacteroidia,22XFZ@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family fieF - - - - - - - - - - - Cation_efflux,ZT_dimer BECNEDJF_01278 411477.PARMER_01802 0.0 887.0 COG0402@1|root,COG0402@2|Bacteria,4NKZV@976|Bacteroidetes,2G2FQ@200643|Bacteroidia 976|Bacteroidetes F Amidohydrolase family guaD - 3.5.4.3 ko:K01487 ko00230,ko01100,map00230,map01100 - R01676 RC00204 ko00000,ko00001,ko01000 - - - Amidohydro_1 BECNEDJF_01279 411477.PARMER_01801 2.03e-312 850.0 28HE2@1|root,2Z7QJ@2|Bacteria,4NFBA@976|Bacteroidetes,2FMTF@200643|Bacteroidia,22W43@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5103) - - - - - - - - - - - - DUF5103 BECNEDJF_01280 411477.PARMER_01800 0.0 887.0 COG1726@1|root,COG1726@2|Bacteria,4NEDQ@976|Bacteroidetes,2FN6J@200643|Bacteroidia,22XC8@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrA - 1.6.5.8 ko:K00346 - - - - ko00000,ko01000 - - - NQRA,NQRA_SLBB BECNEDJF_01281 411477.PARMER_03277 4.13e-143 403.0 COG2199@1|root,COG3706@2|Bacteria,4NPU1@976|Bacteroidetes,2FNEU@200643|Bacteroidia,22XUT@171551|Porphyromonadaceae 976|Bacteroidetes T Carbohydrate-binding family 9 - - - - - - - - - - - - CBM9_2 BECNEDJF_01282 411477.PARMER_03276 0.0 1917.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMCU@200643|Bacteroidia,22WVV@171551|Porphyromonadaceae 976|Bacteroidetes G Fibronectin type III-like domain - - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - F5_F8_type_C,Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C BECNEDJF_01283 411477.PARMER_03275 5.93e-135 383.0 COG2197@1|root,COG2197@2|Bacteria,4NNVV@976|Bacteroidetes,2FN9B@200643|Bacteroidia,22Y0C@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator, LuxR family - - - - - - - - - - - - GerE BECNEDJF_01284 411477.PARMER_03274 9.11e-170 474.0 COG2846@1|root,COG2846@2|Bacteria,4NMCR@976|Bacteroidetes,2FMRX@200643|Bacteroidia,22XMP@171551|Porphyromonadaceae 976|Bacteroidetes D Di-iron-containing protein involved in the repair of iron-sulfur clusters - - - ko:K07322 - - - - ko00000 - - - Hemerythrin BECNEDJF_01286 411477.PARMER_01628 3.27e-93 294.0 COG0577@1|root,COG0577@2|Bacteria,4P0SY@976|Bacteroidetes,2FS0I@200643|Bacteroidia 976|Bacteroidetes V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD BECNEDJF_01287 411477.PARMER_01629 0.0 1509.0 COG0577@1|root,COG0577@2|Bacteria,4P04X@976|Bacteroidetes,2FM7X@200643|Bacteroidia,22ZDY@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD BECNEDJF_01288 411477.PARMER_01630 2.6e-254 698.0 COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,2FN8N@200643|Bacteroidia,22XAM@171551|Porphyromonadaceae 976|Bacteroidetes CO Antioxidant, AhpC TSA family - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 BECNEDJF_01290 411477.PARMER_04157 4.58e-115 344.0 COG1960@1|root,COG1960@2|Bacteria,4NEHA@976|Bacteroidetes,2FM28@200643|Bacteroidia,2301A@171551|Porphyromonadaceae 976|Bacteroidetes I Acyl-CoA dehydrogenase C terminal acd - - - - - - - - - - - Acyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N,AcylCoA_dehyd_C BECNEDJF_01292 411477.PARMER_04160 6.21e-302 824.0 COG0534@1|root,COG0534@2|Bacteria,4NG7Q@976|Bacteroidetes,2FN68@200643|Bacteroidia,22WPA@171551|Porphyromonadaceae 976|Bacteroidetes V Mate efflux family protein dinF - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE BECNEDJF_01293 411477.PARMER_04180 0.0 1367.0 COG5545@1|root,COG5545@2|Bacteria,4NZWD@976|Bacteroidetes,2G30T@200643|Bacteroidia,231ZD@171551|Porphyromonadaceae 976|Bacteroidetes S VirE N-terminal domain - - - - - - - - - - - - DUF3874,VirE,VirE_N BECNEDJF_01294 411477.PARMER_04181 2.05e-81 241.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - Bac_DNA_binding BECNEDJF_01295 411477.PARMER_00168 0.0 2222.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_01296 411477.PARMER_00167 3.18e-181 507.0 COG3712@1|root,COG3712@2|Bacteria,4NPUZ@976|Bacteroidetes,2FQ9G@200643|Bacteroidia,22Y2J@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01298 411477.PARMER_03541 0.0 2076.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,22VWN@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01302 411477.PARMER_03023 5.9e-162 453.0 COG0336@1|root,COG0336@2|Bacteria,4NF2Q@976|Bacteroidetes,2FPQ5@200643|Bacteroidia,22WX6@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the RNA methyltransferase TrmD family trmD GO:0001510,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008757,GO:0009019,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0016772,GO:0016779,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050518,GO:0070567,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.228 ko:K00554 - - R00597 RC00003,RC00334 ko00000,ko01000,ko03016 - - - tRNA_m1G_MT BECNEDJF_01305 411477.PARMER_03026 0.0 1618.0 COG0072@1|root,COG0073@1|root,COG0072@2|Bacteria,COG0073@2|Bacteria,4NF5B@976|Bacteroidetes,2FNBF@200643|Bacteroidia,22WG1@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily pheT GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009328,GO:0009987,GO:0010467,GO:0016070,GO:0019538,GO:0019752,GO:0032991,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:1901360,GO:1901564,GO:1901566,GO:1901576,GO:1902494 6.1.1.20 ko:K01890 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - B3_4,B5,FDX-ACB,tRNA_bind BECNEDJF_01306 411477.PARMER_03027 4.27e-167 468.0 COG0217@1|root,COG0217@2|Bacteria,4NE8Y@976|Bacteroidetes,2FN07@200643|Bacteroidia,22WSF@171551|Porphyromonadaceae 976|Bacteroidetes K transcriptional regulatory protein - - - - - - - - - - - - Transcrip_reg BECNEDJF_01307 411477.PARMER_03029 2.63e-175 489.0 2DQRZ@1|root,338BY@2|Bacteria,4NWXM@976|Bacteroidetes,2G3H8@200643|Bacteroidia,231NQ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01308 1235803.C825_00149 4.56e-105 319.0 2EXGD@1|root,33QSM@2|Bacteria,4P267@976|Bacteroidetes,2FWSV@200643|Bacteroidia,22Z3X@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 BECNEDJF_01309 411477.PARMER_03031 4.92e-188 522.0 COG3022@1|root,COG3022@2|Bacteria,4NFP2@976|Bacteroidetes,2FNHM@200643|Bacteroidia,22XMG@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0246 family yaaA GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006950,GO:0006979,GO:0008150,GO:0033194,GO:0042221,GO:0044424,GO:0044444,GO:0044464,GO:0050896,GO:1901700 - ko:K09861 - - - - ko00000 - - - H2O2_YaaD BECNEDJF_01310 411477.PARMER_03032 4.48e-204 566.0 COG0697@1|root,COG0697@2|Bacteria,4NK8U@976|Bacteroidetes,2FNMF@200643|Bacteroidia,22X8B@171551|Porphyromonadaceae 976|Bacteroidetes EG Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - EamA BECNEDJF_01311 999419.HMPREF1077_01206 0.0 1412.0 COG1629@1|root,COG1629@2|Bacteria,4P2AA@976|Bacteroidetes,2FNFC@200643|Bacteroidia,23229@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 BECNEDJF_01312 411477.PARMER_03036 1.95e-99 288.0 COG1846@1|root,COG1846@2|Bacteria,4NSMN@976|Bacteroidetes,2FSI9@200643|Bacteroidia,22YW3@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix multiple antibiotic resistance protein - - - - - - - - - - - - MarR BECNEDJF_01314 411477.PARMER_03038 4.36e-204 564.0 COG0652@1|root,COG0652@2|Bacteria,4NI3Q@976|Bacteroidetes,2FQYV@200643|Bacteroidia,22XZW@171551|Porphyromonadaceae 976|Bacteroidetes M Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD - - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase BECNEDJF_01315 411477.PARMER_03039 0.0 1070.0 COG0490@1|root,COG2985@1|root,COG0490@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia,22W10@171551|Porphyromonadaceae 976|Bacteroidetes P TrkA C-terminal domain protein - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C BECNEDJF_01316 411477.PARMER_03040 0.0 2997.0 COG2911@1|root,COG2911@2|Bacteria,4NF7F@976|Bacteroidetes,2FNBJ@200643|Bacteroidia,22VVM@171551|Porphyromonadaceae 976|Bacteroidetes S TamB, inner membrane protein subunit of TAM complex - - - - - - - - - - - - TamB BECNEDJF_01317 999419.HMPREF1077_01212 1.78e-240 661.0 COG0533@1|root,COG0533@2|Bacteria,4NE8E@976|Bacteroidetes,2FKZ9@200643|Bacteroidia,22WKJ@171551|Porphyromonadaceae 976|Bacteroidetes O Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction tsaD - 2.3.1.234 ko:K01409 - - R10648 RC00070,RC00416 ko00000,ko01000,ko03016 - - - Peptidase_M22 BECNEDJF_01318 411477.PARMER_03042 4.87e-106 306.0 COG1546@1|root,COG1546@2|Bacteria,4NDVV@976|Bacteroidetes,2FMFI@200643|Bacteroidia,22X5C@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the CinA family cinA - 3.5.1.42 ko:K03742,ko:K03743 ko00760,map00760 - R02322 RC00100 ko00000,ko00001,ko01000 - - - CinA,MoCF_biosynth BECNEDJF_01320 411477.PARMER_03044 5.96e-159 444.0 COG0177@1|root,COG0177@2|Bacteria,4NFF3@976|Bacteroidetes,2FM8U@200643|Bacteroidia,22WI0@171551|Porphyromonadaceae 976|Bacteroidetes L DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate nth - 4.2.99.18 ko:K10773 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - EndIII_4Fe-2S,HhH-GPD BECNEDJF_01321 411477.PARMER_03045 8.7e-83 245.0 COG0239@1|root,COG0239@2|Bacteria,4NV3N@976|Bacteroidetes,2FUP5@200643|Bacteroidia,22YRC@171551|Porphyromonadaceae 976|Bacteroidetes D Important for reducing fluoride concentration in the cell, thus reducing its toxicity crcB - - ko:K06199 - - - - ko00000,ko02000 1.A.43.1,1.A.43.2,1.A.43.3 - - CRCB BECNEDJF_01322 411477.PARMER_03046 4.77e-248 680.0 COG0016@1|root,COG0016@2|Bacteria,4NF8I@976|Bacteroidetes,2FNZN@200643|Bacteroidia,22W2R@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily pheS GO:0003674,GO:0003824,GO:0004812,GO:0004826,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006432,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.20 ko:K01889 ko00970,map00970 M00359,M00360 R03660 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Phe_tRNA-synt_N,tRNA-synt_2d BECNEDJF_01323 411477.PARMER_03047 9.3e-34 116.0 COG3137@1|root,COG3137@2|Bacteria,4NGB2@976|Bacteroidetes,2FPFT@200643|Bacteroidia 976|Bacteroidetes M Protein of unknown function (DUF3078) - - - - - - - - - - - - DUF3078 BECNEDJF_01324 999419.HMPREF1077_01218 1.55e-23 97.1 COG3137@1|root,COG3137@2|Bacteria,4NGB2@976|Bacteroidetes,2FPFT@200643|Bacteroidia,22XYJ@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3078) - - - - - - - - - - - - DUF3078 BECNEDJF_01325 411477.PARMER_03048 6.12e-210 582.0 COG0697@1|root,COG0697@2|Bacteria,4NK8U@976|Bacteroidetes,2FNMF@200643|Bacteroidia,22XPM@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA BECNEDJF_01326 411477.PARMER_02318 1e-289 792.0 COG0738@1|root,COG0738@2|Bacteria,4NEPI@976|Bacteroidetes,2FP0B@200643|Bacteroidia,22X1V@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator gluP - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 BECNEDJF_01327 411477.PARMER_02319 1.86e-271 741.0 COG2017@1|root,COG2017@2|Bacteria,4NF5G@976|Bacteroidetes,2FMMZ@200643|Bacteroidia,22WBQ@171551|Porphyromonadaceae 976|Bacteroidetes G Converts alpha-aldose to the beta-anomer - - 5.1.3.3 ko:K01785 ko00010,ko00052,ko01100,ko01110,ko01120,ko01130,map00010,map00052,map01100,map01110,map01120,map01130 M00632 R01602,R10619 RC00563 ko00000,ko00001,ko00002,ko01000 - - - Aldose_epim BECNEDJF_01328 411477.PARMER_02320 0.0 1352.0 COG3534@1|root,COG3534@2|Bacteria,4NGKW@976|Bacteroidetes,2FM0F@200643|Bacteroidia,22WCS@171551|Porphyromonadaceae 976|Bacteroidetes G PFAM alpha-L-arabinofuranosidase domain protein - - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - Alpha-L-AF_C,CBM_4_9 BECNEDJF_01329 411477.PARMER_03836 0.0 2039.0 2C5U1@1|root,2Z80K@2|Bacteria,4NG4G@976|Bacteroidetes,2FRC3@200643|Bacteroidia,22Y97@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF748 BECNEDJF_01330 411477.PARMER_03837 3.4e-59 182.0 COG2388@1|root,COG2388@2|Bacteria,4NVD1@976|Bacteroidetes,2FU4P@200643|Bacteroidia,22YSA@171551|Porphyromonadaceae 976|Bacteroidetes S GCN5-related N-acetyl-transferase - - - ko:K06975 - - - - ko00000 - - - Acetyltransf_CG BECNEDJF_01331 411477.PARMER_03838 3.61e-108 316.0 COG1357@1|root,COG1357@2|Bacteria,4NQ3B@976|Bacteroidetes,2FPSW@200643|Bacteroidia,22YNV@171551|Porphyromonadaceae 976|Bacteroidetes S Pentapeptide repeats (8 copies) - - - - - - - - - - - - Pentapeptide,Pentapeptide_4 BECNEDJF_01334 1203550.HMPREF1475_00450 8e-281 805.0 COG1629@1|root,COG1629@2|Bacteria,4NF88@976|Bacteroidetes,2G3FD@200643|Bacteroidia 976|Bacteroidetes P receptor - - - - - - - - - - - - CarboxypepD_reg BECNEDJF_01335 1203550.HMPREF1475_00451 5.95e-87 268.0 2E380@1|root,31C3G@2|Bacteria,4NR97@976|Bacteroidetes,2FY6M@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (Porph_ging) - - - - - - - - - - - - Porph_ging BECNEDJF_01338 709991.Odosp_2435 3.61e-82 253.0 COG3279@1|root,COG3279@2|Bacteria,4NGBF@976|Bacteroidetes,2FMKB@200643|Bacteroidia,22XZT@171551|Porphyromonadaceae 976|Bacteroidetes T LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg BECNEDJF_01339 862515.HMPREF0658_2076 6.47e-65 215.0 COG2972@1|root,COG2972@2|Bacteria,4NFDP@976|Bacteroidetes,2FPUC@200643|Bacteroidia 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - 2TM,His_kinase BECNEDJF_01342 457424.BFAG_04463 2.58e-206 592.0 28KMD@1|root,2ZZ4F@2|Bacteria,4NNN9@976|Bacteroidetes,2FQP5@200643|Bacteroidia,4AME7@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01344 1095752.HMPREF9969_2183 3e-118 361.0 COG0714@1|root,COG0714@2|Bacteria,4NJZG@976|Bacteroidetes,2FNHD@200643|Bacteroidia 976|Bacteroidetes S COG NOG11635 non supervised orthologous group - - - - - - - - - - - - DUF3987 BECNEDJF_01345 470145.BACCOP_03060 1.45e-65 201.0 COG2452@1|root,COG2452@2|Bacteria,4P39V@976|Bacteroidetes,2FSJ6@200643|Bacteroidia 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_17 BECNEDJF_01347 1410608.JNKX01000029_gene194 7.64e-171 484.0 COG3654@1|root,COG3943@1|root,COG3654@2|Bacteria,COG3943@2|Bacteria,4NEGN@976|Bacteroidetes,2FQB8@200643|Bacteroidia,4APN9@815|Bacteroidaceae 976|Bacteroidetes S Virulence protein RhuM family - - - - - - - - - - - - Fic,Virulence_RhuM BECNEDJF_01348 999419.HMPREF1077_02410 2.14e-120 368.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FRCF@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Phage_int_SAM_5,Phage_integrase BECNEDJF_01349 999419.HMPREF1077_02411 1.76e-292 798.0 COG0582@1|root,COG0582@2|Bacteria,4NDZJ@976|Bacteroidetes,2FM4Q@200643|Bacteroidia,2321Y@171551|Porphyromonadaceae 976|Bacteroidetes L Arm DNA-binding domain - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_01351 693661.Arcve_2129 5.02e-99 301.0 COG0616@1|root,arCOG01911@2157|Archaea,2XU7H@28890|Euryarchaeota 28890|Euryarchaeota O Serine dehydrogenase proteinase - - - - - - - - - - - - SDH_sah BECNEDJF_01352 763034.HMPREF9446_02998 5.93e-60 184.0 2DQ4C@1|root,334NZ@2|Bacteria,4PM3F@976|Bacteroidetes,2G0Z9@200643|Bacteroidia,4AVFE@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_17 BECNEDJF_01353 1235813.JCM10003_3434 4.18e-63 194.0 COG0789@1|root,COG0789@2|Bacteria,4NPZ2@976|Bacteroidetes,2FSGQ@200643|Bacteroidia,4AR2E@815|Bacteroidaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_17 BECNEDJF_01354 1235813.JCM10003_3436 2.68e-67 204.0 2EP0E@1|root,33GM9@2|Bacteria,4P3HM@976|Bacteroidetes,2FSZ7@200643|Bacteroidia,4AR7U@815|Bacteroidaceae 976|Bacteroidetes S Helix-turn-helix domain - - - - - - - - - - - - HTH_17 BECNEDJF_01355 1235788.C802_03130 3.74e-306 833.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FMQ7@200643|Bacteroidia,4AN7X@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 virE2 - - - - - - - - - - - VirE,VirE_N BECNEDJF_01356 999419.HMPREF1077_02420 8.79e-263 719.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FPHT@200643|Bacteroidia,22W2X@171551|Porphyromonadaceae 976|Bacteroidetes L Toprim-like - - - - - - - - - - - - Toprim_2,zf-CHC2 BECNEDJF_01358 411477.PARMER_03231 0.0 938.0 COG0507@1|root,COG0507@2|Bacteria,4NDYK@976|Bacteroidetes,2FNT1@200643|Bacteroidia,22WXS@171551|Porphyromonadaceae 976|Bacteroidetes L COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member recD2_2 - 3.1.11.5 ko:K01144 - - - - ko00000,ko01000 - - - AAA_30,UvrD_C_2 BECNEDJF_01360 411477.PARMER_03232 1.65e-155 437.0 2EKSY@1|root,33EGP@2|Bacteria,4NXJC@976|Bacteroidetes,2FSBT@200643|Bacteroidia,22YZ5@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23390 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_01361 411477.PARMER_03233 6.35e-164 459.0 COG0313@1|root,COG0313@2|Bacteria,4NFQM@976|Bacteroidetes,2FMU1@200643|Bacteroidia,22W2B@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA rsmI - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase BECNEDJF_01362 411477.PARMER_03234 4.77e-128 372.0 COG4372@1|root,COG4372@2|Bacteria,4NQMG@976|Bacteroidetes,2G2H1@200643|Bacteroidia,231WS@171551|Porphyromonadaceae 976|Bacteroidetes S Transposase - - - - - - - - - - - - - BECNEDJF_01363 411477.PARMER_03235 2.41e-171 477.0 COG1011@1|root,COG1011@2|Bacteria,4NM66@976|Bacteroidetes,2FMM5@200643|Bacteroidia,22XNU@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase yjjG - - ko:K07025 - - - - ko00000 - - - HAD_2 BECNEDJF_01364 411477.PARMER_03236 5.49e-34 122.0 COG3637@1|root,COG3637@2|Bacteria,4NTUD@976|Bacteroidetes,2FS3S@200643|Bacteroidia 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl BECNEDJF_01365 411477.PARMER_03237 0.0 1055.0 COG4108@1|root,COG4108@2|Bacteria,4NFEZ@976|Bacteroidetes,2FN0A@200643|Bacteroidia,22W67@171551|Porphyromonadaceae 976|Bacteroidetes J Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP prfC - - ko:K02837 - - - - ko00000,ko03012 - - - GTP_EFTU,GTP_EFTU_D2,RF3_C BECNEDJF_01366 411477.PARMER_03238 2.64e-208 575.0 COG1091@1|root,COG1091@2|Bacteria,4NE3K@976|Bacteroidetes,2FN7H@200643|Bacteroidia,22WWK@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4- hexulose to yield dTDP-L-rhamnose rfbD - 1.1.1.133 ko:K00067 ko00521,ko00523,ko01130,map00521,map00523,map01130 M00793 R02777 RC00182 ko00000,ko00001,ko00002,ko01000 - - - RmlD_sub_bind BECNEDJF_01367 411477.PARMER_03239 1.05e-125 358.0 2CGY7@1|root,2ZGS8@2|Bacteria,4NREX@976|Bacteroidetes,2FPIK@200643|Bacteroidia,22XT2@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4924) - - - - - - - - - - - - DUF4924 BECNEDJF_01368 411477.PARMER_03240 2.47e-223 615.0 COG0773@1|root,COG0773@2|Bacteria,4NF99@976|Bacteroidetes,2FQTW@200643|Bacteroidia,22Y3A@171551|Porphyromonadaceae 976|Bacteroidetes M Mur ligase middle domain mpl - 6.3.2.45,6.3.2.8 ko:K01924,ko:K02558 ko00471,ko00550,ko01100,map00471,map00550,map01100 - R03193 RC00064,RC00141 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M BECNEDJF_01369 411477.PARMER_03241 2.87e-214 590.0 COG0491@1|root,COG0491@2|Bacteria,4NE98@976|Bacteroidetes,2FQYG@200643|Bacteroidia,22XR4@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily - - - - - - - - - - - - Lactamase_B BECNEDJF_01371 411477.PARMER_03242 3.03e-92 269.0 COG2755@1|root,COG2755@2|Bacteria,4NQAK@976|Bacteroidetes 976|Bacteroidetes E Stress responsive alpha-beta barrel domain protein - - - - - - - - - - - - Dabb BECNEDJF_01372 411477.PARMER_03243 0.0 1582.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNAR@200643|Bacteroidia,22WBH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain nagZ2 - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc,Glyco_hydro_20,Glyco_hydro_20b BECNEDJF_01373 411477.PARMER_03244 1.34e-15 75.9 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NJW1@976|Bacteroidetes,2FNET@200643|Bacteroidia,22WN6@171551|Porphyromonadaceae 976|Bacteroidetes EU Peptidase, S9A B C family, catalytic domain protein - - - - - - - - - - - - PD40,Peptidase_S9 BECNEDJF_01376 483215.BACFIN_08623 3.12e-119 343.0 COG2885@1|root,COG2885@2|Bacteria,4P2SV@976|Bacteroidetes,2FPJF@200643|Bacteroidia,4AQ1F@815|Bacteroidaceae 976|Bacteroidetes M Autotransporter beta-domain - - - - - - - - - - - - DUF3575 BECNEDJF_01377 411901.BACCAC_03815 2.14e-176 511.0 COG2885@1|root,COG2885@2|Bacteria,4P0PV@976|Bacteroidetes,2FPFV@200643|Bacteroidia,4APBE@815|Bacteroidaceae 976|Bacteroidetes M chlorophyll binding - - - - - - - - - - - - DUF3868,OmpA BECNEDJF_01378 483215.BACFIN_08621 1.17e-229 648.0 2BA23@1|root,323FV@2|Bacteria,4PJ0P@976|Bacteroidetes,2FQI5@200643|Bacteroidia,4AVME@815|Bacteroidaceae 976|Bacteroidetes S Major fimbrial subunit protein type IV, Fimbrillin, C-terminal - - - - - - - - - - - - Fimbrillin_C BECNEDJF_01379 483215.BACFIN_08620 9.15e-188 526.0 2DU32@1|root,33NRG@2|Bacteria,4NY6A@976|Bacteroidetes,2FRW1@200643|Bacteroidia,4ASHR@815|Bacteroidaceae 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - GO:0005575,GO:0005623,GO:0008150,GO:0009279,GO:0009297,GO:0009987,GO:0016020,GO:0016043,GO:0019867,GO:0022607,GO:0030030,GO:0030031,GO:0030312,GO:0030313,GO:0031975,GO:0043711,GO:0044085,GO:0044462,GO:0044464,GO:0071840,GO:0071944 - - - - - - - - - - Mfa2 BECNEDJF_01380 483215.BACFIN_08619 6.43e-246 681.0 2A75P@1|root,30W1I@2|Bacteria,4P9ET@976|Bacteroidetes,2FUJA@200643|Bacteroidia,4ASXS@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01381 483215.BACFIN_08618 0.0 2130.0 2DK52@1|root,308JW@2|Bacteria,4NPDA@976|Bacteroidetes,2FRAW@200643|Bacteroidia,4APYN@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - Fib_succ_major,P_gingi_FimA BECNEDJF_01382 483215.BACFIN_08616 9.85e-133 384.0 COG2207@1|root,COG2207@2|Bacteria,4P4BT@976|Bacteroidetes,2FRD3@200643|Bacteroidia,4AVJC@815|Bacteroidaceae 976|Bacteroidetes K Transcriptional regulator, AraC family - - - ko:K20968 ko02025,map02025 - - - ko00000,ko00001,ko03000 - - - HTH_18,HTH_AraC BECNEDJF_01383 483215.BACFIN_08615 5.86e-89 268.0 2BFKU@1|root,329F3@2|Bacteria,4PK0T@976|Bacteroidetes,2FTPD@200643|Bacteroidia,4ARIQ@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_01384 411477.PARMER_03250 1.15e-190 540.0 COG3634@1|root,COG3634@2|Bacteria,4NGJY@976|Bacteroidetes,2FM1S@200643|Bacteroidia,22WAT@171551|Porphyromonadaceae 976|Bacteroidetes C NADH dehydrogenase ahpF - - ko:K03387 - - - - ko00000,ko01000 - - - Pyr_redox_2,Thioredoxin_3 BECNEDJF_01385 411477.PARMER_01847 2.26e-295 835.0 COG5492@1|root,COG5492@2|Bacteria 2|Bacteria N domain, Protein - - - - - - - - - - - - FMN_bind,Flg_new,Glug,WxL BECNEDJF_01386 411477.PARMER_01846 0.0 944.0 COG2271@1|root,COG2271@2|Bacteria,4PKTC@976|Bacteroidetes,2G3HT@200643|Bacteroidia,23233@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 BECNEDJF_01387 411477.PARMER_01844 0.0 863.0 COG0285@1|root,COG0285@2|Bacteria,4NES8@976|Bacteroidetes,2FNFB@200643|Bacteroidia,22VZ3@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the folylpolyglutamate synthase family folC - 6.3.2.12,6.3.2.17 ko:K11754 ko00790,ko01100,map00790,map01100 M00126,M00841 R00942,R02237,R04241 RC00064,RC00090,RC00162 ko00000,ko00001,ko00002,ko01000 - - - Mur_ligase_M BECNEDJF_01388 411477.PARMER_01843 1.03e-50 160.0 COG0724@1|root,COG0724@2|Bacteria,4P4WZ@976|Bacteroidetes,2G2C8@200643|Bacteroidia,230Z7@171551|Porphyromonadaceae 976|Bacteroidetes S RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - - - - - - - - - - RRM_1 BECNEDJF_01389 435591.BDI_0558 4.37e-260 722.0 COG2244@1|root,COG2244@2|Bacteria,4NN3M@976|Bacteroidetes,2FUDU@200643|Bacteroidia,22YD5@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - Polysacc_synt,Polysacc_synt_C BECNEDJF_01390 585543.HMPREF0969_03444 2.86e-116 333.0 COG0250@1|root,COG0250@2|Bacteria,4NQI2@976|Bacteroidetes,2FRZX@200643|Bacteroidia,4APDQ@815|Bacteroidaceae 976|Bacteroidetes K Transcription termination antitermination factor NusG - - - - - - - - - - - - KOW,NusG BECNEDJF_01392 411479.BACUNI_02808 1.51e-73 220.0 2ATQW@1|root,31J9N@2|Bacteria,4PK7G@976|Bacteroidetes,2FU6S@200643|Bacteroidia,4AS3Y@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_01393 585543.HMPREF0969_03448 1.97e-134 400.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FMQ7@200643|Bacteroidia,4AKZ4@815|Bacteroidaceae 976|Bacteroidetes S P-loop ATPase and inactivated derivatives - - - - - - - - - - - - DUF3874,VirE,VirE_N BECNEDJF_01394 411477.PARMER_01753 1.85e-192 537.0 COG3940@1|root,COG3940@2|Bacteria,4PMUR@976|Bacteroidetes,2FNKX@200643|Bacteroidia,22Z7G@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 BECNEDJF_01395 411477.PARMER_01752 5.44e-279 761.0 COG0131@1|root,COG0241@1|root,COG0131@2|Bacteria,COG0241@2|Bacteria,4NENP@976|Bacteroidetes,2FP1T@200643|Bacteroidia,22VYJ@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine biosynthesis bifunctional protein HisB hisB GO:0000105,GO:0003674,GO:0003824,GO:0004424,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 3.1.3.15,4.2.1.19 ko:K01089,ko:K01693 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013,R03457 RC00017,RC00932 ko00000,ko00001,ko00002,ko01000 - - - Hydrolase_like,IGPD,PNK3P BECNEDJF_01396 411477.PARMER_01751 5.36e-247 678.0 COG0079@1|root,COG0079@2|Bacteria,4NEDI@976|Bacteroidetes,2FMFQ@200643|Bacteroidia,22WB3@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily hisC - 2.6.1.9 ko:K00817 ko00340,ko00350,ko00360,ko00400,ko00401,ko00960,ko01100,ko01110,ko01130,ko01230,map00340,map00350,map00360,map00400,map00401,map00960,map01100,map01110,map01130,map01230 M00026 R00694,R00734,R03243 RC00006,RC00888 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_01397 411477.PARMER_01750 3.15e-294 805.0 COG0141@1|root,COG0141@2|Bacteria,4NFPZ@976|Bacteroidetes,2FMY9@200643|Bacteroidia,22WQW@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine hisD GO:0000105,GO:0003674,GO:0003824,GO:0004399,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0052803,GO:0055114,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.23 ko:K00013 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01158,R01163,R03012 RC00099,RC00242,RC00463 ko00000,ko00001,ko00002,ko01000 - - - Histidinol_dh BECNEDJF_01398 411477.PARMER_01749 8.97e-182 507.0 COG0040@1|root,COG0040@2|Bacteria,4NDW8@976|Bacteroidetes,2FNGI@200643|Bacteroidia,22VX5@171551|Porphyromonadaceae 976|Bacteroidetes F ATP phosphoribosyltransferase hisG GO:0000105,GO:0003674,GO:0003824,GO:0003879,GO:0006082,GO:0006520,GO:0006547,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.4.2.17 ko:K00765 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R01071 RC02819,RC03200 ko00000,ko00001,ko00002,ko01000 - - - HisG,HisG_C BECNEDJF_01399 411477.PARMER_00038 0.0 1198.0 COG3307@1|root,COG3307@2|Bacteria,4NJ9U@976|Bacteroidetes,2FMEI@200643|Bacteroidia,22XAU@171551|Porphyromonadaceae 976|Bacteroidetes M O-Antigen ligase - - - - - - - - - - - - ANAPC3,TPR_8,Wzy_C BECNEDJF_01400 411477.PARMER_00040 0.0 1720.0 COG0841@1|root,COG0841@2|Bacteria,4NH0G@976|Bacteroidetes,2FM3G@200643|Bacteroidia,22X2G@171551|Porphyromonadaceae 976|Bacteroidetes V AcrB/AcrD/AcrF family - - - - - - - - - - - - ACR_tran BECNEDJF_01401 411477.PARMER_03585 3.25e-187 520.0 COG2133@1|root,COG2133@2|Bacteria,4PKJE@976|Bacteroidetes,2FX58@200643|Bacteroidia,231GZ@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 BECNEDJF_01402 411477.PARMER_03583 1.27e-153 434.0 COG1043@1|root,COG1043@2|Bacteria,4NN2E@976|Bacteroidetes,2FMA1@200643|Bacteroidia,22VX4@171551|Porphyromonadaceae 976|Bacteroidetes M Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxA2 - 2.3.1.129 ko:K00677 ko00540,ko01100,ko01503,map00540,map01100,map01503 M00060 R04567 RC00039,RC00055 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Acetyltransf_11,Hexapep BECNEDJF_01403 411477.PARMER_03582 0.0 870.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FND5@200643|Bacteroidia,22W3J@171551|Porphyromonadaceae 976|Bacteroidetes MU Efflux transporter, outer membrane factor - - - - - - - - - - - - OEP BECNEDJF_01404 411477.PARMER_03581 0.0 2026.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22WZM@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family mexF - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran BECNEDJF_01405 411477.PARMER_03580 9.67e-274 751.0 COG0845@1|root,COG0845@2|Bacteria,4NEXN@976|Bacteroidetes,2FQ1C@200643|Bacteroidia,22VVY@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family mtrC - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 BECNEDJF_01406 411477.PARMER_03579 1.43e-138 393.0 COG5473@1|root,COG5473@2|Bacteria,4PMV7@976|Bacteroidetes,2FVN3@200643|Bacteroidia,22YW8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01407 411477.PARMER_03578 1.02e-245 675.0 COG1609@1|root,COG1609@2|Bacteria,4NE81@976|Bacteroidetes,2FN0D@200643|Bacteroidia,22WVG@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn _helix lactose operon repressor - - - ko:K02529 - - - - ko00000,ko03000 - - - LacI,Peripla_BP_4 BECNEDJF_01408 411477.PARMER_03577 7.14e-188 522.0 COG1028@1|root,COG1028@2|Bacteria,4NG8R@976|Bacteroidetes,2FMB9@200643|Bacteroidia,22WEJ@171551|Porphyromonadaceae 976|Bacteroidetes IQ KR domain uxuB - - - - - - - - - - - adh_short,adh_short_C2 BECNEDJF_01409 411477.PARMER_03576 2.64e-289 789.0 COG1312@1|root,COG1312@2|Bacteria,4NFA5@976|Bacteroidetes,2FM15@200643|Bacteroidia,22WGQ@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the dehydration of D-mannonate uxuA GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005975,GO:0005996,GO:0006063,GO:0006064,GO:0006082,GO:0008150,GO:0008152,GO:0008198,GO:0008927,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016829,GO:0016835,GO:0016836,GO:0019585,GO:0019752,GO:0030145,GO:0032787,GO:0042839,GO:0042840,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0046365,GO:0046395,GO:0046872,GO:0046914,GO:0071704,GO:0072329,GO:1901575 4.2.1.8 ko:K01686 ko00040,ko01100,map00040,map01100 M00061 R05606 RC00543 ko00000,ko00001,ko00002,ko01000 - - - UxuA BECNEDJF_01410 999419.HMPREF1077_00853 8.98e-191 531.0 COG0739@1|root,COG0739@2|Bacteria,4NQX6@976|Bacteroidetes,2FT6W@200643|Bacteroidia,230GT@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 nlpD_2 - - - - - - - - - - - LysM,Peptidase_M23 BECNEDJF_01411 411477.PARMER_03574 3.99e-127 363.0 COG2095@1|root,COG2095@2|Bacteria,4NG94@976|Bacteroidetes,2FNCS@200643|Bacteroidia,22XUU@171551|Porphyromonadaceae 976|Bacteroidetes U UPF0056 membrane protein marC - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC BECNEDJF_01412 411477.PARMER_03573 1.2e-140 401.0 COG2364@1|root,COG2364@2|Bacteria,4NH2G@976|Bacteroidetes,2FR84@200643|Bacteroidia 976|Bacteroidetes S Membrane - - - - - - - - - - - - - BECNEDJF_01413 999419.HMPREF1077_00850 4.79e-123 351.0 COG1595@1|root,COG1595@2|Bacteria,4NTD3@976|Bacteroidetes,2FTGP@200643|Bacteroidia,22YJ7@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_01414 999419.HMPREF1077_00849 5.38e-271 742.0 COG3712@1|root,COG3712@2|Bacteria,4NJBJ@976|Bacteroidetes,2FQUN@200643|Bacteroidia,22Y1N@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01415 999419.HMPREF1077_00848 0.0 1816.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22XBF@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01416 999419.HMPREF1077_00848 1.34e-138 421.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22XBF@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01417 999419.HMPREF1077_00847 0.0 1169.0 COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,2FNFW@200643|Bacteroidia,22ZQW@171551|Porphyromonadaceae 976|Bacteroidetes E Starch-binding associating with outer membrane - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_01418 999419.HMPREF1077_00846 1.61e-251 689.0 COG4225@1|root,COG4225@2|Bacteria,4NHK7@976|Bacteroidetes,2FPVZ@200643|Bacteroidia,22XE1@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 BECNEDJF_01419 999419.HMPREF1077_00845 9e-93 272.0 COG1278@1|root,COG1278@2|Bacteria,4NNNH@976|Bacteroidetes,2FSAQ@200643|Bacteroidia,22YBN@171551|Porphyromonadaceae 976|Bacteroidetes K 'Cold-shock' DNA-binding domain cspG - - - - - - - - - - - CSD BECNEDJF_01420 999419.HMPREF1077_00844 1.18e-63 194.0 COG0724@1|root,COG0724@2|Bacteria,4NUIS@976|Bacteroidetes,2G2C2@200643|Bacteroidia,230Q7@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:RRM_6 - - - - - - - - - - - - RRM_1 BECNEDJF_01421 411477.PARMER_03570 5.56e-142 400.0 COG2818@1|root,COG2818@2|Bacteria,4NGRC@976|Bacteroidetes,2FN7E@200643|Bacteroidia,22WRE@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-3-methyladenine glycosylase tag - 3.2.2.20 ko:K01246 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - Adenine_glyco BECNEDJF_01422 763034.HMPREF9446_03470 1.43e-310 846.0 COG0582@1|root,COG0582@2|Bacteria,4NF8X@976|Bacteroidetes,2FM2R@200643|Bacteroidia,4AKQM@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_01423 763034.HMPREF9446_03469 1.54e-230 636.0 2E31N@1|root,32Y21@2|Bacteria,4NX1F@976|Bacteroidetes,2FPRT@200643|Bacteroidia,4AMD9@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_01424 585543.HMPREF0969_02702 1.45e-16 71.6 2A15M@1|root,30PBI@2|Bacteria,4PBX3@976|Bacteroidetes,2FZN1@200643|Bacteroidia,4AUNQ@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01425 1121098.HMPREF1534_03634 5.84e-201 557.0 COG0582@1|root,COG0582@2|Bacteria,4NI5P@976|Bacteroidetes,2G04I@200643|Bacteroidia,4AN43@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_01426 1121098.HMPREF1534_03633 3.27e-227 625.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,4AM1W@815|Bacteroidaceae 976|Bacteroidetes K transcriptional regulator (AraC family) - - - - - - - - - - - - HTH_18 BECNEDJF_01427 226186.BT_1122 3.73e-286 780.0 COG2706@1|root,COG2706@2|Bacteria,4NE87@976|Bacteroidetes,2FMKW@200643|Bacteroidia,4AK8R@815|Bacteroidaceae 976|Bacteroidetes G COG2706 3-carboxymuconate cyclase pgl - 3.1.1.31 ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Lactonase BECNEDJF_01428 226186.BT_1121 0.0 1073.0 COG0599@1|root,COG1073@1|root,COG0599@2|Bacteria,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,2FMNP@200643|Bacteroidia,4AM6J@815|Bacteroidaceae 976|Bacteroidetes S of the alpha beta superfamily - - - ko:K06889 - - - - ko00000 - - - CMD,Peptidase_S15 BECNEDJF_01429 999419.HMPREF1077_02993 6.93e-243 670.0 COG0409@1|root,COG0409@2|Bacteria,4NIM8@976|Bacteroidetes,2FQVF@200643|Bacteroidia,22XFK@171551|Porphyromonadaceae 976|Bacteroidetes O Hydrogenase formation hypA family - - - ko:K04654 - - - - ko00000 - - - HypD BECNEDJF_01430 999419.HMPREF1077_02992 1.06e-59 184.0 COG0298@1|root,COG0298@2|Bacteria,4NWHY@976|Bacteroidetes,2FV3C@200643|Bacteroidia,22YSZ@171551|Porphyromonadaceae 976|Bacteroidetes O HupF/HypC family - - - ko:K04653 - - - - ko00000 - - - HupF_HypC BECNEDJF_01431 411477.PARMER_04394 2.23e-218 616.0 COG0068@1|root,COG0068@2|Bacteria,4NIZ1@976|Bacteroidetes,2FRRN@200643|Bacteroidia,22X9I@171551|Porphyromonadaceae 976|Bacteroidetes O Acylphosphatase - - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Peptidase_M22,Sua5_yciO_yrdC,zf-HYPF BECNEDJF_01432 411477.PARMER_04394 4.02e-195 555.0 COG0068@1|root,COG0068@2|Bacteria,4NIZ1@976|Bacteroidetes,2FRRN@200643|Bacteroidia,22X9I@171551|Porphyromonadaceae 976|Bacteroidetes O Acylphosphatase - - - ko:K04656 - - - - ko00000 - - - Acylphosphatase,Peptidase_M22,Sua5_yciO_yrdC,zf-HYPF BECNEDJF_01433 999419.HMPREF1077_02990 2.35e-64 197.0 COG0375@1|root,COG0375@2|Bacteria,4NWR5@976|Bacteroidetes,2FV7V@200643|Bacteroidia,22YT9@171551|Porphyromonadaceae 976|Bacteroidetes S Probably plays a role in a hydrogenase nickel cofactor insertion step hypA - - ko:K04651 - - - - ko00000,ko03110 - - - HypA BECNEDJF_01434 411477.PARMER_02231 2.55e-121 345.0 COG0454@1|root,COG0456@2|Bacteria,4NQVT@976|Bacteroidetes,2FPFH@200643|Bacteroidia,22YJN@171551|Porphyromonadaceae 976|Bacteroidetes K Acetyltransferase (GNAT) domain paiA - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10 BECNEDJF_01435 411477.PARMER_02232 0.0 1025.0 COG1492@1|root,COG1492@2|Bacteria,4NG0W@976|Bacteroidetes,2G2ZS@200643|Bacteroidia,22X6B@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation cobQ - 6.3.5.10 ko:K02232 ko00860,ko01100,map00860,map01100 M00122 R05225 RC00010,RC01302 ko00000,ko00001,ko00002,ko01000 - - - AAA_26,CbiA,GATase_3 BECNEDJF_01436 411477.PARMER_02233 4.66e-128 363.0 COG0250@1|root,COG0250@2|Bacteria,4NSVU@976|Bacteroidetes,2FTNR@200643|Bacteroidia,22Y7C@171551|Porphyromonadaceae 976|Bacteroidetes K Transcription termination factor nusG - - - - - - - - - - - - KOW,NusG BECNEDJF_01438 411477.PARMER_02235 0.0 1216.0 COG3537@1|root,COG3537@2|Bacteria,4NI5B@976|Bacteroidetes,2FMQ3@200643|Bacteroidia,22X79@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_01439 411477.PARMER_01626 4.03e-155 457.0 COG0577@1|root,COG0577@2|Bacteria,4NKVT@976|Bacteroidetes,2G2XN@200643|Bacteroidia,22Z46@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - - - - - - - - - - FtsX,MacB_PCD BECNEDJF_01440 411477.PARMER_01627 0.0 1514.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2G2XM@200643|Bacteroidia,22WGT@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_01442 999419.HMPREF1077_00177 9.49e-282 770.0 COG0436@1|root,COG0436@2|Bacteria,4NENS@976|Bacteroidetes,2FMU2@200643|Bacteroidia,22VY5@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase aspC - 2.6.1.1 ko:K00812 ko00220,ko00250,ko00270,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00355,R00694,R00734,R00896,R02433,R02619,R05052 RC00006 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_01443 411477.PARMER_01609 1.13e-293 801.0 COG0108@1|root,COG0807@1|root,COG0108@2|Bacteria,COG0807@2|Bacteria,4NF6I@976|Bacteroidetes,2FNS0@200643|Bacteroidia,22WUR@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate ribBA - 3.5.4.25,4.1.99.12 ko:K14652 ko00740,ko00790,ko01100,ko01110,map00740,map00790,map01100,map01110 M00125,M00840 R00425,R07281 RC00293,RC01792,RC01815,RC02504 ko00000,ko00001,ko00002,ko01000 - - - DHBP_synthase,GTP_cyclohydro2 BECNEDJF_01444 411477.PARMER_01608 0.0 1241.0 COG0795@1|root,COG0795@2|Bacteria,4NE8B@976|Bacteroidetes,2FP6P@200643|Bacteroidia,22XC3@171551|Porphyromonadaceae 976|Bacteroidetes S Permease, YjgP YjgQ family - - - ko:K07091 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko02000 1.B.42.1 - - YjgP_YjgQ BECNEDJF_01445 411477.PARMER_01607 4.32e-87 256.0 COG3832@1|root,COG3832@2|Bacteria,4NNY1@976|Bacteroidetes,2FSYB@200643|Bacteroidia,22YFH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - AHSA1 BECNEDJF_01446 411477.PARMER_00151 2.05e-192 540.0 28IG3@1|root,2Z8HM@2|Bacteria,4NFJR@976|Bacteroidetes,2FP1Z@200643|Bacteroidia,22WE3@171551|Porphyromonadaceae 976|Bacteroidetes S Gliding motility-associated protein, GldL gldL - - - - - - - - - - - - BECNEDJF_01447 411477.PARMER_00150 0.0 991.0 COG1262@1|root,COG1262@2|Bacteria,4NGY2@976|Bacteroidetes,2FPTN@200643|Bacteroidia,22W76@171551|Porphyromonadaceae 976|Bacteroidetes M gliding motility-associated lipoprotein GldK gldK - - - - - - - - - - - FGE-sulfatase BECNEDJF_01448 411477.PARMER_00149 7.12e-227 625.0 COG0226@1|root,COG0226@2|Bacteria,4PKGM@976|Bacteroidetes,2G3GH@200643|Bacteroidia,22XC5@171551|Porphyromonadaceae 976|Bacteroidetes P Type IX secretion system membrane protein PorP/SprF - - - - - - - - - - - - PorP_SprF BECNEDJF_01450 411477.PARMER_00863 2.4e-153 431.0 29A5Q@1|root,2ZX6Q@2|Bacteria,4NP43@976|Bacteroidetes,2FPGZ@200643|Bacteroidia,22YB2@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01451 1236514.BAKL01000036_gene2992 7.44e-05 45.1 2DHJJ@1|root,3001Z@2|Bacteria,4P9VI@976|Bacteroidetes,2FVJJ@200643|Bacteroidia,4ATZB@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01453 411477.PARMER_03919 1.71e-89 268.0 COG0697@1|root,COG0697@2|Bacteria,4NHQX@976|Bacteroidetes,2FM74@200643|Bacteroidia,22VZY@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - ko:K08978 - - - - ko00000,ko02000 2.A.7.2 - - EamA BECNEDJF_01454 411477.PARMER_03918 2.42e-147 415.0 2C9DF@1|root,333A7@2|Bacteria,4NSB0@976|Bacteroidetes,2FMUV@200643|Bacteroidia,22YFC@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3256) - - - - - - - - - - - - DUF3256 BECNEDJF_01456 411477.PARMER_03916 1.69e-107 311.0 COG1595@1|root,COG1595@2|Bacteria,4NS8T@976|Bacteroidetes,2FRUY@200643|Bacteroidia,22YCS@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_01457 411477.PARMER_03915 5.83e-118 338.0 COG1413@1|root,COG1413@2|Bacteria,4NXQU@976|Bacteroidetes,2FTDB@200643|Bacteroidia,22Z03@171551|Porphyromonadaceae 976|Bacteroidetes C lyase activity - - - - - - - - - - - - - BECNEDJF_01458 411477.PARMER_03914 3.85e-103 298.0 2CFJZ@1|root,32SKC@2|Bacteria,4NTV9@976|Bacteroidetes,2G38N@200643|Bacteroidia,22YGH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01459 411477.PARMER_03913 1.18e-223 615.0 28NPZ@1|root,2ZBPQ@2|Bacteria,4NN3K@976|Bacteroidetes,2FPEH@200643|Bacteroidia,22Y6X@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - OMP_b-brl_2 BECNEDJF_01461 411479.BACUNI_01212 0.0 1077.0 28JY0@1|root,2Z9ND@2|Bacteria,4NIG7@976|Bacteroidetes,2FR5B@200643|Bacteroidia,4AKV4@815|Bacteroidaceae 976|Bacteroidetes S SusE outer membrane protein - - - ko:K21571 - - - - ko00000 - - - DUF5115,SusE,SusF_SusE BECNEDJF_01462 411479.BACUNI_01211 0.0 1090.0 COG3637@1|root,COG3637@2|Bacteria,4NEA6@976|Bacteroidetes,2FNRM@200643|Bacteroidia,4AKT2@815|Bacteroidaceae 976|Bacteroidetes M SusD family susD GO:0001871,GO:0003674,GO:0005488,GO:0005509,GO:0005515,GO:0005575,GO:0005975,GO:0005976,GO:0005982,GO:0006073,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0019867,GO:0030246,GO:0030247,GO:0042802,GO:0043167,GO:0043169,GO:0043170,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0046872,GO:0071704,GO:2001070 - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_01463 411479.BACUNI_01209 0.0 914.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FP9Q@200643|Bacteroidia,4ANGT@815|Bacteroidaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - ko:K21573 - - - - ko00000,ko02000 1.B.14.6.1 - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01464 1122931.AUAE01000016_gene2694 1.62e-137 399.0 COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FP6E@200643|Bacteroidia,22Y39@171551|Porphyromonadaceae 976|Bacteroidetes PT FecR protein - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01466 411477.PARMER_00404 1.42e-289 790.0 COG1409@1|root,COG1409@2|Bacteria,4NG8Q@976|Bacteroidetes,2G35U@200643|Bacteroidia,22ZKG@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos,Pur_ac_phosph_N BECNEDJF_01467 411477.PARMER_00405 0.0 1154.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FNY3@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_01468 411477.PARMER_00406 0.0 2232.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22VUR@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_01469 999419.HMPREF1077_03567 8.8e-217 600.0 COG3712@1|root,COG3712@2|Bacteria,4NKN5@976|Bacteroidetes,2FP6E@200643|Bacteroidia,22Y39@171551|Porphyromonadaceae 976|Bacteroidetes PT FecR protein - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01470 411477.PARMER_00409 2.64e-141 399.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,230RU@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_01472 999419.HMPREF1077_03570 1.65e-303 827.0 28NIY@1|root,2ZBK8@2|Bacteria,4NM7G@976|Bacteroidetes,2FQNB@200643|Bacteroidia,22XZ1@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01473 411477.PARMER_00413 2.95e-50 159.0 COG0724@1|root,COG0724@2|Bacteria,4NT1J@976|Bacteroidetes 976|Bacteroidetes S PFAM RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) - - - - - - - - - - - - RRM_1 BECNEDJF_01474 411477.PARMER_00415 0.0 873.0 COG1260@1|root,COG1260@2|Bacteria,4NI0F@976|Bacteroidetes,2FMB3@200643|Bacteroidia,22WM9@171551|Porphyromonadaceae 976|Bacteroidetes I Myo-inositol-1-phosphate synthase ino1 - 5.5.1.4 ko:K01858 ko00521,ko00562,ko01100,ko01130,map00521,map00562,map01100,map01130 - R07324 RC01804 ko00000,ko00001,ko01000 - - - Inos-1-P_synth,NAD_binding_5 BECNEDJF_01475 411477.PARMER_00416 2.79e-102 296.0 COG1267@1|root,COG1267@2|Bacteria,4NP7N@976|Bacteroidetes,2FSAM@200643|Bacteroidia,22Y1Q@171551|Porphyromonadaceae 976|Bacteroidetes I Phosphatidylglycerophosphatase A pgpA - 3.1.3.27 ko:K01095 ko00564,ko01100,map00564,map01100 - R02029 RC00017 ko00000,ko00001,ko01000 - - - PgpA BECNEDJF_01476 411477.PARMER_00417 1.08e-118 339.0 COG2246@1|root,COG2246@2|Bacteria,4NQD6@976|Bacteroidetes,2FRAR@200643|Bacteroidia,22YK2@171551|Porphyromonadaceae 976|Bacteroidetes S GtrA-like protein - - - - - - - - - - - - GtrA BECNEDJF_01477 999419.HMPREF1077_03575 3.27e-158 444.0 COG0558@1|root,COG0558@2|Bacteria,4NGNI@976|Bacteroidetes,2FM7W@200643|Bacteroidia,22XRI@171551|Porphyromonadaceae 976|Bacteroidetes I Belongs to the CDP-alcohol phosphatidyltransferase class-I family pgsA1 - 2.7.8.5 ko:K00995 ko00564,ko01100,map00564,map01100 - R01801 RC00002,RC00017,RC02795 ko00000,ko00001,ko01000 - - - CDP-OH_P_transf,DUF4833 BECNEDJF_01478 411477.PARMER_00419 1.68e-227 626.0 COG0671@1|root,COG0671@2|Bacteria,4NHDK@976|Bacteroidetes,2FNI9@200643|Bacteroidia,22WDY@171551|Porphyromonadaceae 976|Bacteroidetes I PAP2 superfamily - - - - - - - - - - - - PAP2_3 BECNEDJF_01479 999419.HMPREF1077_03577 1.77e-196 544.0 COG1409@1|root,COG1409@2|Bacteria,4NGXX@976|Bacteroidetes,2FPJ6@200643|Bacteroidia,22WTS@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase - - - - - - - - - - - - Metallophos BECNEDJF_01480 411477.PARMER_00422 5e-153 429.0 294ZR@1|root,2ZSCK@2|Bacteria,4NNYY@976|Bacteroidetes,2FP6D@200643|Bacteroidia,22XYV@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG27188 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_01481 411477.PARMER_00423 3.16e-150 422.0 COG3047@1|root,COG3047@2|Bacteria,4NP9X@976|Bacteroidetes,2FMHB@200643|Bacteroidia,22XWW@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl BECNEDJF_01482 411477.PARMER_00424 5.69e-154 432.0 28N4A@1|root,2ZB9T@2|Bacteria,4NKZG@976|Bacteroidetes,2FP6K@200643|Bacteroidia,22XPK@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4136) - - - - - - - - - - - - DUF4136 BECNEDJF_01483 411477.PARMER_00425 1.15e-37 126.0 COG0454@1|root,COG0456@2|Bacteria 2|Bacteria K acetyltransferase - - - - - - - - - - - - Acetyltransf_1,Acetyltransf_10,Transglut_core BECNEDJF_01484 411477.PARMER_00426 9.88e-110 316.0 COG0454@1|root,COG0456@2|Bacteria,4NVMB@976|Bacteroidetes,2G2SQ@200643|Bacteroidia 976|Bacteroidetes K Acetyltransferase (GNAT) family - - - - - - - - - - - - Acetyltransf_10 BECNEDJF_01485 999419.HMPREF1077_03581 2.14e-115 335.0 COG2885@1|root,COG2885@2|Bacteria,4NEGF@976|Bacteroidetes,2FNU2@200643|Bacteroidia,22XKZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the ompA family - - - - - - - - - - - - Gly-zipper_Omp,OmpA BECNEDJF_01486 411477.PARMER_00428 6.64e-73 218.0 2C27K@1|root,32XKH@2|Bacteria,4NTIY@976|Bacteroidetes,2FU25@200643|Bacteroidia,22YJY@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_01487 411477.PARMER_00429 0.0 1147.0 COG0514@1|root,COG0514@2|Bacteria,4NEFD@976|Bacteroidetes,2FMT4@200643|Bacteroidia,22VWK@171551|Porphyromonadaceae 976|Bacteroidetes L ATP-dependent DNA helicase RecQ recQ2 - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecQ_Zn_bind BECNEDJF_01488 999419.HMPREF1077_03584 8.55e-230 654.0 COG0542@1|root,COG0542@2|Bacteria,4NGEM@976|Bacteroidetes,2FM5N@200643|Bacteroidia,22WE7@171551|Porphyromonadaceae 976|Bacteroidetes O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE clpB - - ko:K03695 ko04213,map04213 - - - ko00000,ko00001,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N BECNEDJF_01489 411477.PARMER_01357 0.0 1461.0 COG3968@1|root,COG3968@2|Bacteria,4NG2B@976|Bacteroidetes,2FMC9@200643|Bacteroidia,22WEW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the glutamine synthetase family glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - GSIII_N,Gln-synt_C BECNEDJF_01490 411477.PARMER_01358 1.12e-288 787.0 2DBYM@1|root,2ZBW8@2|Bacteria,4NHDU@976|Bacteroidetes,2FQXP@200643|Bacteroidia,22Y34@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 BECNEDJF_01491 411477.PARMER_01359 5.12e-244 669.0 COG3507@1|root,COG3507@2|Bacteria,4NEMG@976|Bacteroidetes,2FPP1@200643|Bacteroidia,22WTR@171551|Porphyromonadaceae 976|Bacteroidetes G F5 8 type C domain - - - - - - - - - - - - F5_F8_type_C,Glyco_hydro_43 BECNEDJF_01492 411477.PARMER_02746 0.0 1003.0 COG0116@1|root,COG0116@2|Bacteria,4NFJM@976|Bacteroidetes,2FMNN@200643|Bacteroidia,22WIQ@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the methyltransferase superfamily rlmL - - ko:K07444 - - - - ko00000,ko01000 - - - THUMP,UPF0020 BECNEDJF_01493 411477.PARMER_02745 2.02e-218 602.0 COG1045@1|root,COG1045@2|Bacteria,4NGZ7@976|Bacteroidetes,2FM9U@200643|Bacteroidia,22XAZ@171551|Porphyromonadaceae 976|Bacteroidetes E Serine acetyltransferase cysE - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,SATase_N BECNEDJF_01494 411477.PARMER_02742 3.12e-115 330.0 COG3467@1|root,COG3467@2|Bacteria,4NPDK@976|Bacteroidetes,2G2MH@200643|Bacteroidia,22Y2U@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:Pyridox_oxidase - - - ko:K07005 - - - - ko00000 - - - Pyridox_ox_2 BECNEDJF_01495 411477.PARMER_01364 1.04e-250 690.0 COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,2FPA0@200643|Bacteroidia,22VXS@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23,OEP BECNEDJF_01496 411477.PARMER_01365 1.56e-301 823.0 COG0577@1|root,COG0577@2|Bacteria,4NFUG@976|Bacteroidetes,2FM5B@200643|Bacteroidia,22X15@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_01497 411477.PARMER_01366 6.14e-297 811.0 COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,2FNZ2@200643|Bacteroidia,22WQ3@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter permease - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_01498 411477.PARMER_01367 5.75e-63 197.0 COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,2FNRG@200643|Bacteroidia,22VW5@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran BECNEDJF_01499 999419.HMPREF1077_02742 1.82e-72 228.0 COG1538@1|root,COG1538@2|Bacteria,4NKK6@976|Bacteroidetes,2FP9K@200643|Bacteroidia,22WHA@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_01500 411477.PARMER_01878 1.21e-115 331.0 COG0716@1|root,COG0716@2|Bacteria,4NP3J@976|Bacteroidetes,2FT0W@200643|Bacteroidia,2308X@171551|Porphyromonadaceae 976|Bacteroidetes C Low-potential electron donor to a number of redox enzymes isiB - - ko:K03839 - - - - ko00000 - - - Flavodoxin_1 BECNEDJF_01501 411477.PARMER_01877 0.0 1371.0 COG0022@1|root,COG1071@1|root,COG0022@2|Bacteria,COG1071@2|Bacteria,4NE71@976|Bacteroidetes,2FQB7@200643|Bacteroidia,22WIK@171551|Porphyromonadaceae 976|Bacteroidetes C Dehydrogenase E1 component bfmBAB - 1.2.4.4 ko:K11381 ko00280,ko00640,ko01100,ko01110,ko01130,map00280,map00640,map01100,map01110,map01130 M00036 R07599,R07600,R07601,R07602,R07603,R07604,R10996,R10997 RC00027,RC00627,RC02743,RC02883,RC02949,RC02953 br01601,ko00000,ko00001,ko00002,ko01000 - - - E1_dh,Transket_pyr,Transketolase_C BECNEDJF_01502 411477.PARMER_01875 9.33e-225 625.0 COG0508@1|root,COG0508@2|Bacteria,4NED0@976|Bacteroidetes,2FNQF@200643|Bacteroidia,22XWE@171551|Porphyromonadaceae 976|Bacteroidetes C 2-oxoacid dehydrogenases acyltransferase (catalytic domain) bfmBB - 2.3.1.61 ko:K00658 ko00020,ko00310,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00310,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00032 R02570,R02571,R08549 RC00004,RC02727,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - 2-oxoacid_dh,Biotin_lipoyl,E3_binding BECNEDJF_01503 411477.PARMER_01397 7.16e-232 638.0 COG0205@1|root,COG0205@2|Bacteria,4NF8F@976|Bacteroidetes,2FMPI@200643|Bacteroidia,22W6D@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11 ko:K00850 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko03018,ko04152,ko05230,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map03018,map04152,map05230 M00001,M00345 R00756,R03236,R03237,R03238,R03239,R04779 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000,ko01009,ko03019 - - - PFK BECNEDJF_01504 411477.PARMER_01399 1.31e-209 579.0 COG0761@1|root,COG0761@2|Bacteria,4NDUX@976|Bacteroidetes,2FMU7@200643|Bacteroidia,22XB1@171551|Porphyromonadaceae 976|Bacteroidetes IM Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis ispH - 1.17.7.4 ko:K03527 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05884,R08210 RC01137,RC01487 ko00000,ko00001,ko00002,ko01000 - - - LYTB BECNEDJF_01505 411477.PARMER_01400 2.29e-177 494.0 COG0283@1|root,COG0283@2|Bacteria,4NEMB@976|Bacteroidetes,2FM71@200643|Bacteroidia,22X8Z@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the cytidylate kinase family. Type 1 subfamily cmk GO:0003674,GO:0003824,GO:0004127,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006573,GO:0006575,GO:0006725,GO:0006732,GO:0006753,GO:0006766,GO:0006767,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009117,GO:0009123,GO:0009165,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0016874,GO:0016879,GO:0016881,GO:0018130,GO:0019205,GO:0019438,GO:0019637,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0034654,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0046939,GO:0046940,GO:0050145,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0090407,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605 2.7.4.25 ko:K00945 ko00240,ko01100,map00240,map01100 M00052 R00158,R00512,R01665 RC00002 ko00000,ko00001,ko00002,ko01000 - - - Cytidylate_kin BECNEDJF_01506 411477.PARMER_01401 3.67e-240 660.0 COG2067@1|root,COG2067@2|Bacteria,4NHNC@976|Bacteroidetes,2FP24@200643|Bacteroidia,22WI2@171551|Porphyromonadaceae 976|Bacteroidetes I penicillin-binding protein porQ - - - - - - - - - - - PorP_SprF BECNEDJF_01507 411477.PARMER_01403 4.74e-120 347.0 COG0810@1|root,COG0810@2|Bacteria,4NMG7@976|Bacteroidetes,2FPKW@200643|Bacteroidia,22XTD@171551|Porphyromonadaceae 976|Bacteroidetes M Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins tonB2 - - ko:K03832 - - - - ko00000,ko02000 2.C.1.1 - - TonB_C BECNEDJF_01508 411477.PARMER_03693 0.0 998.0 COG0427@1|root,COG0427@2|Bacteria,4NFS3@976|Bacteroidetes,2FNCA@200643|Bacteroidia,22WU5@171551|Porphyromonadaceae 976|Bacteroidetes C acetyl-CoA hydrolase scpC - 2.8.3.18,3.1.2.1 ko:K01067,ko:K18118 ko00020,ko00620,ko00650,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00620,map00650,map01100,map01110,map01120,map01130,map01200 M00009,M00011 R00227,R10343 RC00004,RC00012,RC00014 ko00000,ko00001,ko00002,ko01000 - - - AcetylCoA_hyd_C,AcetylCoA_hydro BECNEDJF_01511 411477.PARMER_03695 0.0 894.0 COG0621@1|root,COG0621@2|Bacteria,4NDU6@976|Bacteroidetes,2FNP7@200643|Bacteroidia,22W5Y@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine miaB - 2.8.4.3 ko:K06168 - - R10645,R10646,R10647 RC00003,RC00980,RC03221,RC03222 ko00000,ko01000,ko03016 - - - Radical_SAM,TRAM,UPF0004 BECNEDJF_01514 411477.PARMER_03487 1.88e-111 320.0 COG0582@1|root,COG0582@2|Bacteria,4PMV6@976|Bacteroidetes,2G0HI@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_01516 411477.PARMER_03485 1.7e-101 294.0 2CQRQ@1|root,32SMQ@2|Bacteria,4NTA8@976|Bacteroidetes,2FS5Q@200643|Bacteroidia,22YW9@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_01517 411477.PARMER_03484 1.69e-248 681.0 2DPEG@1|root,331RV@2|Bacteria,4PMV5@976|Bacteroidetes,2G0HH@200643|Bacteroidia,22YV4@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01518 411477.PARMER_03483 5.56e-212 584.0 COG1082@1|root,COG1082@2|Bacteria,4NIWS@976|Bacteroidetes,2FQ58@200643|Bacteroidia,22WFN@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N BECNEDJF_01519 999419.HMPREF1077_01536 0.0 2521.0 COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - - - - - - - - - - - HATPase_c,HTH_18,HTH_AraC,HisKA,Reg_prop,Response_reg,Y_Y_Y BECNEDJF_01520 663321.REG_1033 3.11e-09 61.2 COG3464@1|root,COG3464@2|Bacteria,1N2KA@1224|Proteobacteria,1RS78@1236|Gammaproteobacteria 1236|Gammaproteobacteria L of 539 from GenPept.129 gb AAL57569.1 AF453441_53 (AF453441) - - - - - - - - - - - - DDE_Tnp_ISL3,zf-ISL3 BECNEDJF_01522 411477.PARMER_01924 3e-221 609.0 COG0175@1|root,COG0175@2|Bacteria,4NEPD@976|Bacteroidetes,2FM2X@200643|Bacteroidia,22WIA@171551|Porphyromonadaceae 976|Bacteroidetes H COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase) FAD synthetase cysD - 2.7.7.4 ko:K00957 ko00230,ko00261,ko00450,ko00920,ko01100,ko01120,ko01130,map00230,map00261,map00450,map00920,map01100,map01120,map01130 M00176,M00596 R00529,R04929 RC02809,RC02889 ko00000,ko00001,ko00002,ko01000 - - - PAPS_reduct BECNEDJF_01523 411477.PARMER_01925 5.23e-152 427.0 COG0529@1|root,COG0529@2|Bacteria,4NGCU@976|Bacteroidetes,2FMA4@200643|Bacteroidia,22XG5@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of activated sulfate cysC GO:0003674,GO:0003824,GO:0004020,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237 2.7.1.25 ko:K00860 ko00230,ko00920,ko01100,ko01120,map00230,map00920,map01100,map01120 M00176 R00509,R04928 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - APS_kinase BECNEDJF_01524 411477.PARMER_01926 3.71e-51 163.0 2CCSR@1|root,32RWC@2|Bacteria,4NSDM@976|Bacteroidetes,2FU2H@200643|Bacteroidia,22YEI@171551|Porphyromonadaceae 976|Bacteroidetes S 23S rRNA-intervening sequence protein - - - - - - - - - - - - 23S_rRNA_IVP BECNEDJF_01525 411477.PARMER_01927 0.0 982.0 COG0471@1|root,COG0471@2|Bacteria,4NF52@976|Bacteroidetes,2FNWH@200643|Bacteroidia,22X6C@171551|Porphyromonadaceae 976|Bacteroidetes P Citrate transporter - - - - - - - - - - - - CitMHS,TrkA_C BECNEDJF_01526 411477.PARMER_03156 4.11e-129 367.0 28HFG@1|root,2Z7RJ@2|Bacteria,4NFNY@976|Bacteroidetes,2FKZK@200643|Bacteroidia,22X14@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of Unknown Function (DUF1599) - - - - - - - - - - - - DUF1599 BECNEDJF_01527 411477.PARMER_03157 2.28e-310 845.0 COG2259@1|root,COG2259@2|Bacteria,4NGNF@976|Bacteroidetes,2G2Z3@200643|Bacteroidia,22W11@171551|Porphyromonadaceae 976|Bacteroidetes S DoxX family - - - - - - - - - - - - DoxX BECNEDJF_01528 411477.PARMER_03158 2.05e-178 497.0 COG0149@1|root,COG0149@2|Bacteria,4NE2F@976|Bacteroidetes,2FNEK@200643|Bacteroidia,22VV8@171551|Porphyromonadaceae 976|Bacteroidetes G Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D-glyceraldehyde-3-phosphate (G3P) tpiA GO:0003674,GO:0003824,GO:0004807,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006066,GO:0006071,GO:0006081,GO:0006082,GO:0006090,GO:0006091,GO:0006094,GO:0006096,GO:0006139,GO:0006163,GO:0006164,GO:0006165,GO:0006725,GO:0006732,GO:0006733,GO:0006753,GO:0006754,GO:0006757,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009108,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009135,GO:0009141,GO:0009142,GO:0009144,GO:0009145,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009166,GO:0009167,GO:0009168,GO:0009179,GO:0009185,GO:0009199,GO:0009201,GO:0009205,GO:0009206,GO:0009259,GO:0009260,GO:0009987,GO:0016051,GO:0016052,GO:0016053,GO:0016310,GO:0016853,GO:0016860,GO:0016861,GO:0017144,GO:0018130,GO:0019318,GO:0019319,GO:0019359,GO:0019362,GO:0019363,GO:0019400,GO:0019405,GO:0019438,GO:0019439,GO:0019563,GO:0019637,GO:0019682,GO:0019693,GO:0019751,GO:0019752,GO:0032787,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0042866,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044262,GO:0044270,GO:0044271,GO:0044275,GO:0044281,GO:0044282,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046031,GO:0046034,GO:0046164,GO:0046166,GO:0046174,GO:0046184,GO:0046364,GO:0046390,GO:0046394,GO:0046434,GO:0046483,GO:0046496,GO:0046700,GO:0046939,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072330,GO:0072521,GO:0072522,GO:0072524,GO:0072525,GO:0090407,GO:1901135,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901566,GO:1901575,GO:1901576,GO:1901615,GO:1901616 5.3.1.1 ko:K01803 ko00010,ko00051,ko00562,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00051,map00562,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01015 RC00423 ko00000,ko00001,ko00002,ko01000,ko04147 - - - TIM BECNEDJF_01529 411477.PARMER_03159 2.66e-112 322.0 2E2TU@1|root,32XVZ@2|Bacteria,4NVA0@976|Bacteroidetes,2FUX1@200643|Bacteroidia,22YNI@171551|Porphyromonadaceae 976|Bacteroidetes S Sporulation related domain - - - - - - - - - - - - SPOR BECNEDJF_01530 411477.PARMER_03160 3.09e-139 393.0 COG0302@1|root,COG0302@2|Bacteria,4NFC2@976|Bacteroidetes,2FMYB@200643|Bacteroidia,22WSJ@171551|Porphyromonadaceae 976|Bacteroidetes F GTP cyclohydrolase 1 folE GO:0000166,GO:0001882,GO:0001883,GO:0003674,GO:0003824,GO:0003933,GO:0003934,GO:0005488,GO:0005525,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006066,GO:0006725,GO:0006729,GO:0006732,GO:0006807,GO:0008150,GO:0008152,GO:0008270,GO:0009058,GO:0009108,GO:0009987,GO:0016787,GO:0016810,GO:0016814,GO:0017076,GO:0017144,GO:0018130,GO:0019001,GO:0019238,GO:0019438,GO:0019751,GO:0032549,GO:0032550,GO:0032553,GO:0032555,GO:0032561,GO:0034311,GO:0034312,GO:0034641,GO:0035639,GO:0036094,GO:0042558,GO:0042559,GO:0043167,GO:0043168,GO:0043169,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046146,GO:0046165,GO:0046173,GO:0046483,GO:0046872,GO:0046914,GO:0051186,GO:0051188,GO:0071704,GO:0097159,GO:0097367,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901615,GO:1901617 3.5.4.16 ko:K01495 ko00790,ko01100,map00790,map01100 M00126,M00841,M00842,M00843 R00428,R04639,R05046,R05048 RC00263,RC00294,RC00323,RC00945,RC01188 ko00000,ko00001,ko00002,ko01000 - - - GTP_cyclohydroI BECNEDJF_01531 999419.HMPREF1077_00040 3.02e-36 122.0 2A7PI@1|root,30WN0@2|Bacteria,4PA19@976|Bacteroidetes,2FVYD@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01533 411477.PARMER_01363 5.69e-138 400.0 COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,2FM98@200643|Bacteroidia,22WWD@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP BECNEDJF_01534 411477.PARMER_01362 0.0 1375.0 COG3023@1|root,COG3023@2|Bacteria,4PKIH@976|Bacteroidetes 976|Bacteroidetes V Alpha-glucosidase - - 3.2.1.20,3.2.1.3 ko:K01187,ko:K21574 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R01790,R01791,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31,GH97 - GH97_C,GH97_N,Glyco_hydro_97 BECNEDJF_01535 411477.PARMER_01361 2.64e-275 753.0 COG1082@1|root,COG1082@2|Bacteria,4NEWC@976|Bacteroidetes,2FMTJ@200643|Bacteroidia,22ZWZ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl-hydrolase 97 C-terminal, oligomerisation - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - GH97_C,GH97_N,Glyco_hydro_97 BECNEDJF_01536 1122931.AUAE01000031_gene2894 3.4e-104 311.0 COG1917@1|root,COG4977@1|root,COG1917@2|Bacteria,COG4977@2|Bacteria,4NJ70@976|Bacteroidetes,2FRJS@200643|Bacteroidia,231GE@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_AraC BECNEDJF_01537 411477.PARMER_03280 0.0 1052.0 COG3119@1|root,COG3119@2|Bacteria,4NFC9@976|Bacteroidetes,2FMH6@200643|Bacteroidia,22VWT@171551|Porphyromonadaceae 976|Bacteroidetes P Domain of unknown function - - - - - - - - - - - - DUF4994,Sulfatase BECNEDJF_01538 999419.HMPREF1077_00670 3.02e-242 669.0 COG4175@1|root,COG4175@2|Bacteria,4PM3T@976|Bacteroidetes,2FMA7@200643|Bacteroidia,22Y6H@171551|Porphyromonadaceae 976|Bacteroidetes E Domain in cystathionine beta-synthase and other proteins. proV - 3.6.3.32 ko:K02000 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.12 - - ABC_tran,CBS BECNEDJF_01539 411477.PARMER_00892 3.01e-185 516.0 COG4176@1|root,COG4176@2|Bacteria,4NH0P@976|Bacteroidetes,2FP5Z@200643|Bacteroidia,22YT1@171551|Porphyromonadaceae 976|Bacteroidetes P Binding-protein-dependent transport system inner membrane component - - - ko:K02001 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - BPD_transp_1 BECNEDJF_01540 411477.PARMER_00893 4.05e-208 575.0 COG2113@1|root,COG2113@2|Bacteria,4NI3D@976|Bacteroidetes,2G2MI@200643|Bacteroidia,2307W@171551|Porphyromonadaceae 976|Bacteroidetes E Substrate binding domain of ABC-type glycine betaine transport system - - - ko:K02002 ko02010,map02010 M00208 - - ko00000,ko00001,ko00002,ko02000 3.A.1.12 - - OpuAC BECNEDJF_01541 999419.HMPREF1077_00673 7.44e-184 511.0 COG2755@1|root,COG2755@2|Bacteria,4NP73@976|Bacteroidetes,2FXPF@200643|Bacteroidia 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 BECNEDJF_01542 411477.PARMER_00895 7.39e-113 323.0 COG1528@1|root,COG1528@2|Bacteria,4NGS7@976|Bacteroidetes,2FQD1@200643|Bacteroidia,22Y73@171551|Porphyromonadaceae 976|Bacteroidetes P Iron-storage protein ftnA - 1.16.3.2 ko:K02217 - - - - ko00000,ko01000 - - - Ferritin BECNEDJF_01543 411477.PARMER_00896 3.02e-92 270.0 COG0071@1|root,COG0071@2|Bacteria,4NQXY@976|Bacteroidetes,2FS35@200643|Bacteroidia,22Y68@171551|Porphyromonadaceae 976|Bacteroidetes O Belongs to the small heat shock protein (HSP20) family hsp20 - - ko:K13993 ko04141,map04141 - - - ko00000,ko00001,ko03110 - - - HSP20 BECNEDJF_01544 411477.PARMER_04110 6.4e-235 646.0 COG0502@1|root,COG0502@2|Bacteria,4NEMA@976|Bacteroidetes,2FN6Q@200643|Bacteroidia,22WH5@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism bioB - 2.8.1.6 ko:K01012 ko00780,ko01100,map00780,map01100 M00123,M00573,M00577 R01078 RC00441 ko00000,ko00001,ko00002,ko01000 - - - BATS,Radical_SAM BECNEDJF_01545 411477.PARMER_04109 1.94e-89 263.0 28YFF@1|root,32NQS@2|Bacteria,4P9U6@976|Bacteroidetes,2FVGN@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01546 411477.PARMER_04108 0.0 986.0 COG3104@1|root,COG3104@2|Bacteria,4NE8R@976|Bacteroidetes,2FNB6@200643|Bacteroidia,22WY5@171551|Porphyromonadaceae 976|Bacteroidetes E amino acid peptide transporter - - - ko:K03305 - - - - ko00000 2.A.17 - - PTR2 BECNEDJF_01547 411477.PARMER_04107 8.13e-136 391.0 28M15@1|root,2ZAG0@2|Bacteria,4NJBY@976|Bacteroidetes,2FMGZ@200643|Bacteroidia,22WHH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4831) - - - - - - - - - - - - DUF4831 BECNEDJF_01548 411477.PARMER_03126 3.7e-141 399.0 COG2431@1|root,COG2431@2|Bacteria,4NMM0@976|Bacteroidetes,2FNT2@200643|Bacteroidia,22XP9@171551|Porphyromonadaceae 976|Bacteroidetes S Lysine exporter LysO - - - - - - - - - - - - Lys_export BECNEDJF_01549 411477.PARMER_03125 2.85e-53 167.0 2EFF3@1|root,3397Y@2|Bacteria,4NVP1@976|Bacteroidetes,2FTU1@200643|Bacteroidia,22YUY@171551|Porphyromonadaceae 976|Bacteroidetes S Lysine exporter LysO - - - - - - - - - - - - Lys_export BECNEDJF_01550 411477.PARMER_03124 4.44e-91 266.0 2BHVX@1|root,32BZS@2|Bacteria,4PFCD@976|Bacteroidetes,2G1IB@200643|Bacteroidia,2310R@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01552 411477.PARMER_03122 0.0 1561.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22XIK@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_01553 411477.PARMER_03121 3.6e-67 204.0 COG0393@1|root,COG0393@2|Bacteria,4NQGB@976|Bacteroidetes,2FT9V@200643|Bacteroidia,22YBW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0145 family - - - - - - - - - - - - YbjQ_1 BECNEDJF_01554 411901.BACCAC_03880 1.5e-284 785.0 COG3973@1|root,COG3973@2|Bacteria,4NITV@976|Bacteroidetes,2FPMX@200643|Bacteroidia,4ANB8@815|Bacteroidaceae 976|Bacteroidetes L COG COG3973 Superfamily I DNA and RNA helicases helD - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - AAA_19,UvrD-helicase,UvrD_C BECNEDJF_01555 411479.BACUNI_00947 4.01e-168 475.0 COG3677@1|root,COG3677@2|Bacteria,4NJC5@976|Bacteroidetes,2G2VB@200643|Bacteroidia,4AQ5E@815|Bacteroidaceae 976|Bacteroidetes L COG NOG14720 non supervised orthologous group - - - - - - - - - - - - DDE_Tnp_IS1595,Zn_Tnp_IS1595 BECNEDJF_01562 1069080.KB913028_gene391 3.32e-86 261.0 COG1216@1|root,COG1216@2|Bacteria,1VUIX@1239|Firmicutes 1239|Firmicutes S Glycosyl transferase, family 2 - - - - - - - - - - - - - BECNEDJF_01563 411477.PARMER_00569 2.55e-135 392.0 COG1216@1|root,COG1216@2|Bacteria,4NJWR@976|Bacteroidetes,2G3FK@200643|Bacteroidia,22XRB@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 BECNEDJF_01564 411477.PARMER_00568 2.37e-311 848.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMXE@200643|Bacteroidia,22W6E@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.136 ko:K02474,ko:K13015 ko00520,map00520 - R00421,R06894 RC00291 ko00000,ko00001,ko01000,ko01005 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N BECNEDJF_01565 411477.PARMER_00567 1.35e-145 412.0 arCOG09486@1|root,2ZC3Y@2|Bacteria,4NNUF@976|Bacteroidetes,2FP8A@200643|Bacteroidia,230J0@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl transferase family 11 - - - - - - - - - - - - Glyco_transf_11 BECNEDJF_01566 411477.PARMER_01604 0.0 925.0 COG0642@1|root,COG0745@1|root,COG2207@1|root,COG0642@2|Bacteria,COG0745@2|Bacteria,COG2207@2|Bacteria,4P04W@976|Bacteroidetes,2FP7F@200643|Bacteroidia 976|Bacteroidetes T cheY-homologous receiver domain - - - - - - - - - - - - HTH_18,Response_reg BECNEDJF_01567 435591.BDI_3498 4.32e-18 94.4 2ENTM@1|root,33GET@2|Bacteria 2|Bacteria S Major fimbrial subunit protein (FimA) - - - - - - - - - - - - P_gingi_FimA BECNEDJF_01568 411477.PARMER_01602 4.79e-290 792.0 2ENTM@1|root,33GET@2|Bacteria,4P3M4@976|Bacteroidetes 976|Bacteroidetes S Major fimbrial subunit protein (FimA) - GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - - - - - - - - - - Fimbrillin_C,P_gingi_FimA BECNEDJF_01569 411477.PARMER_00593 8.99e-225 619.0 COG2207@1|root,COG2207@2|Bacteria,4NEGP@976|Bacteroidetes,2G0GS@200643|Bacteroidia,231YF@171551|Porphyromonadaceae 976|Bacteroidetes K AraC-like ligand binding domain - - - - - - - - - - - - AraC_binding,HTH_18 BECNEDJF_01570 411477.PARMER_00592 0.0 1101.0 COG4690@1|root,COG4690@2|Bacteria,4NEQE@976|Bacteroidetes,2FN3E@200643|Bacteroidia,22XFY@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family C69 - - - - - - - - - - - - Peptidase_C69 BECNEDJF_01571 762984.HMPREF9445_01349 1.39e-43 158.0 COG0610@1|root,COG0610@2|Bacteria,4NFJ8@976|Bacteroidetes,2FMP6@200643|Bacteroidia,4AKDV@815|Bacteroidaceae 976|Bacteroidetes V Subunit R is required for both nuclease and ATPase activities, but not for modification hsdR - 3.1.21.3 ko:K01153 - - - - ko00000,ko01000,ko02048 - - - EcoR124_C,HSDR_N,ResIII BECNEDJF_01572 1002367.HMPREF0673_00350 0.0 910.0 COG0286@1|root,COG0286@2|Bacteria,4NG0E@976|Bacteroidetes,2FNN6@200643|Bacteroidia 976|Bacteroidetes V type I restriction-modification system hsdM - 2.1.1.72 ko:K03427 - - - - ko00000,ko01000,ko02048 - - - HsdM_N,N6_Mtase BECNEDJF_01573 449673.BACSTE_00225 3.58e-238 655.0 COG3943@1|root,COG3943@2|Bacteria,4NEGN@976|Bacteroidetes,2FM81@200643|Bacteroidia,4AP0J@815|Bacteroidaceae 976|Bacteroidetes S COG3943 Virulence protein - - - - - - - - - - - - Virulence_RhuM BECNEDJF_01576 641143.HMPREF9331_01293 8.23e-67 218.0 COG0732@1|root,COG0732@2|Bacteria,4NS05@976|Bacteroidetes,1IGGN@117743|Flavobacteriia,1ETBE@1016|Capnocytophaga 976|Bacteroidetes V K01154 type I restriction enzyme, S subunit - - 3.1.21.3 ko:K01154 - - - - ko00000,ko01000,ko02048 - - - Methylase_S BECNEDJF_01577 411477.PARMER_04079 1.46e-120 345.0 COG4657@1|root,COG4657@2|Bacteria,4NGEZ@976|Bacteroidetes,2FM9J@200643|Bacteroidia,22WWX@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfA - - ko:K03617 - - - - ko00000 - - - Rnf-Nqr BECNEDJF_01578 411477.PARMER_04078 4.98e-119 342.0 COG4660@1|root,COG4660@2|Bacteria,4NHHP@976|Bacteroidetes,2FM8R@200643|Bacteroidia,22VWQ@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfE - - ko:K03613 - - - - ko00000 - - - Rnf-Nqr BECNEDJF_01579 411477.PARMER_04077 5.7e-134 381.0 COG4659@1|root,COG4659@2|Bacteria,4NP1D@976|Bacteroidetes,2FM22@200643|Bacteroidia,22Y0Q@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfG - - ko:K03612 - - - - ko00000 - - - FMN_bind BECNEDJF_01580 411477.PARMER_04076 2.03e-223 616.0 COG4658@1|root,COG4658@2|Bacteria,4NESE@976|Bacteroidetes,2FM2Y@200643|Bacteroidia,22XDK@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfD - - ko:K03614 - - - - ko00000 - - - NQR2_RnfD_RnfE BECNEDJF_01581 411477.PARMER_04075 8.76e-299 817.0 COG4656@1|root,COG4656@2|Bacteria,4NIS7@976|Bacteroidetes,2FMAQ@200643|Bacteroidia,22WJW@171551|Porphyromonadaceae 976|Bacteroidetes C Part of a membrane complex involved in electron transport rnfC - - ko:K03615 - - - - ko00000 - - - Complex1_51K,Fer4_10,Fer4_17,Fer4_8,RnfC_N,SLBB BECNEDJF_01582 411477.PARMER_04074 1.55e-199 557.0 COG1148@1|root,COG2878@1|root,COG1148@2|Bacteria,COG2878@2|Bacteria,4NFEB@976|Bacteroidetes,2FMPN@200643|Bacteroidia,22XEE@171551|Porphyromonadaceae 976|Bacteroidetes C Ferredoxin rnfB - - ko:K03616 - - - - ko00000 - - - FeS,Fer4 BECNEDJF_01583 999419.HMPREF1077_00967 5.98e-100 290.0 COG3086@1|root,COG3086@2|Bacteria,4NV0R@976|Bacteroidetes,2FS4Y@200643|Bacteroidia,22YNS@171551|Porphyromonadaceae 976|Bacteroidetes T Positive regulator of sigma(E), RseC MucC - - - ko:K03803 - - - - ko00000,ko03021 - - - RseC_MucC BECNEDJF_01584 411477.PARMER_04072 0.0 1055.0 2DBZ9@1|root,2ZC03@2|Bacteria,4NNB6@976|Bacteroidetes,2G1AM@200643|Bacteroidia,231XK@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3078) - - - - - - - - - - - - DUF3078 BECNEDJF_01585 999419.HMPREF1077_00969 2.92e-20 89.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22ZZT@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_01586 411477.PARMER_04068 1.97e-124 354.0 COG0634@1|root,COG0634@2|Bacteria,4NNIB@976|Bacteroidetes,2FN5J@200643|Bacteroidia,22Y0N@171551|Porphyromonadaceae 976|Bacteroidetes F Hypoxanthine phosphoribosyltransferase hpt - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran BECNEDJF_01587 411477.PARMER_04067 7.92e-129 366.0 COG0563@1|root,COG0563@2|Bacteria,4NG7J@976|Bacteroidetes,2FM8T@200643|Bacteroidia,22XNF@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism adk - 2.7.4.3 ko:K00939 ko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130 M00049 R00127,R01547,R11319 RC00002 ko00000,ko00001,ko00002,ko01000,ko04147 - - - ADK,Pribosyltran BECNEDJF_01588 411477.PARMER_04066 4.57e-268 735.0 COG0536@1|root,COG0536@2|Bacteria,4NEK4@976|Bacteroidetes,2FM6Z@200643|Bacteroidia,22W3F@171551|Porphyromonadaceae 976|Bacteroidetes S An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control obg - - ko:K03979 - - - - ko00000,ko01000,ko03009 - - - GTP1_OBG,MMR_HSR1 BECNEDJF_01589 411477.PARMER_04065 1.52e-201 558.0 COG1496@1|root,COG1496@2|Bacteria,4NM9H@976|Bacteroidetes,2FN7X@200643|Bacteroidia,22XMH@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the multicopper oxidase YfiH RL5 family - GO:0003674,GO:0003824,GO:0005488,GO:0005507,GO:0005515,GO:0008150,GO:0008152,GO:0016491,GO:0016679,GO:0016682,GO:0042802,GO:0042803,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0046983,GO:0055114 - ko:K05810 - - - - ko00000,ko01000 - - - Cu-oxidase_4 BECNEDJF_01590 411477.PARMER_04063 4.81e-157 441.0 COG3382@1|root,COG3382@2|Bacteria,4NMUG@976|Bacteroidetes,2FNY7@200643|Bacteroidia,22XQA@171551|Porphyromonadaceae 976|Bacteroidetes S B3/4 domain - - - - - - - - - - - - B3_4 BECNEDJF_01591 411477.PARMER_04062 2.02e-39 130.0 2DQMQ@1|root,337NM@2|Bacteria,4NX13@976|Bacteroidetes,2FUJV@200643|Bacteroidia,22YU8@171551|Porphyromonadaceae 976|Bacteroidetes S Winged helix-turn-helix domain (DUF2582) - - - - - - - - - - - - DUF2582 BECNEDJF_01592 411477.PARMER_04061 1.32e-58 181.0 2EGWR@1|root,33ANW@2|Bacteria,4NYKH@976|Bacteroidetes,2FT4M@200643|Bacteroidia,22YZ7@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_01593 411477.PARMER_04060 8.3e-57 177.0 29XCA@1|root,30J23@2|Bacteria,4PHN4@976|Bacteroidetes,2G1IC@200643|Bacteroidia,23189@171551|Porphyromonadaceae 976|Bacteroidetes D Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division - - - ko:K09888 - - - - ko00000,ko03036 - - - ZapA BECNEDJF_01594 411477.PARMER_04059 0.0 913.0 COG1418@1|root,COG1418@2|Bacteria,4NE3V@976|Bacteroidetes,2FKZ6@200643|Bacteroidia,22XBS@171551|Porphyromonadaceae 976|Bacteroidetes S Endoribonuclease that initiates mRNA decay rny - - ko:K18682 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DUF3552,HD,KH_1 BECNEDJF_01595 411477.PARMER_04058 0.0 2338.0 COG3250@1|root,COG3250@2|Bacteria,4NF3W@976|Bacteroidetes,2FM0P@200643|Bacteroidia,22VUW@171551|Porphyromonadaceae 976|Bacteroidetes G beta-galactosidase - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - Bgal_small_N,DUF4981,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_01596 411477.PARMER_04057 1.05e-126 360.0 2ARAZ@1|root,31GKZ@2|Bacteria,4NKJD@976|Bacteroidetes,2FPQT@200643|Bacteroidia,22Y6A@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF3332) - - - - - - - - - - - - DUF3332 BECNEDJF_01597 411477.PARMER_04056 0.0 1211.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FPY4@200643|Bacteroidia,22ZFJ@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_01598 411477.PARMER_04055 0.0 2080.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWUI@200643|Bacteroidia,22Z7X@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_01599 411477.PARMER_01849 5.05e-192 533.0 COG1947@1|root,COG1947@2|Bacteria,4NGFC@976|Bacteroidetes,2FM2B@200643|Bacteroidia,22X69@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol ispE GO:0003674,GO:0003824,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0009987,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0044237,GO:0050515 2.7.1.148 ko:K00919 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05634 RC00002,RC01439 ko00000,ko00001,ko00002,ko01000 - - - GHMP_kinases_C,GHMP_kinases_N BECNEDJF_01600 411477.PARMER_01850 4.07e-138 390.0 COG0500@1|root,COG2226@2|Bacteria,4NV0Z@976|Bacteroidetes,2FV9K@200643|Bacteroidia,22YVQ@171551|Porphyromonadaceae 976|Bacteroidetes Q Mycolic acid cyclopropane synthetase - - - - - - - - - - - - Methyltransf_11,Methyltransf_23,Methyltransf_31 BECNEDJF_01601 411477.PARMER_01851 0.0 1675.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NJW1@976|Bacteroidetes,2FNET@200643|Bacteroidia,22WN6@171551|Porphyromonadaceae 976|Bacteroidetes EU Peptidase, S9A B C family, catalytic domain protein - - - - - - - - - - - - PD40,Peptidase_S9 BECNEDJF_01603 411477.PARMER_03175 7.77e-260 711.0 COG3391@1|root,COG3391@2|Bacteria,4NM81@976|Bacteroidetes,2FP02@200643|Bacteroidia,22XZP@171551|Porphyromonadaceae 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like BECNEDJF_01605 411477.PARMER_03172 5.81e-224 619.0 COG3710@1|root,COG3710@2|Bacteria 2|Bacteria K Transcriptional regulator - - - - - - - - - - - - Trans_reg_C BECNEDJF_01606 1122931.AUAE01000028_gene168 2.02e-48 167.0 COG0457@1|root,COG0457@2|Bacteria,4NMG2@976|Bacteroidetes,2FP23@200643|Bacteroidia,22XTY@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_16,TPR_19,TPR_2,TPR_8 BECNEDJF_01607 411477.PARMER_02551 4.01e-74 233.0 COG0436@1|root,COG0436@2|Bacteria,4NHP7@976|Bacteroidetes,2FN3D@200643|Bacteroidia,22XCE@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase alaC - - - - - - - - - - - Aminotran_1_2 BECNEDJF_01608 411477.PARMER_02550 3.22e-146 411.0 COG1678@1|root,COG1678@2|Bacteria,4NFQA@976|Bacteroidetes,2FM82@200643|Bacteroidia,22YAY@171551|Porphyromonadaceae 976|Bacteroidetes K Uncharacterized ACR, COG1678 - - - ko:K07735 - - - - ko00000,ko03000 - - - DUF179 BECNEDJF_01609 411477.PARMER_02549 3.17e-129 366.0 COG1670@1|root,COG1670@2|Bacteria,4NQ8K@976|Bacteroidetes,2FMII@200643|Bacteroidia,22Y4G@171551|Porphyromonadaceae 976|Bacteroidetes J Acetyltransferase (GNAT) domain speG - 2.3.1.57 ko:K00657 ko00330,ko01100,ko04216,map00330,map01100,map04216 M00135 R01154 RC00004,RC00096 ko00000,ko00001,ko00002,ko01000 - - - Acetyltransf_3 BECNEDJF_01610 411477.PARMER_02548 5.9e-279 762.0 COG1216@1|root,COG1216@2|Bacteria,4NFW5@976|Bacteroidetes,2FQ14@200643|Bacteroidia,22X88@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl transferase family group 2 wbbL - - ko:K07011 - - - - ko00000 - - - Glyco_tranf_2_3,Glyco_trans_2_3,Glycos_transf_2 BECNEDJF_01611 411477.PARMER_02547 1.8e-136 387.0 COG0353@1|root,COG0353@2|Bacteria,4NEWI@976|Bacteroidetes,2FM1C@200643|Bacteroidia,22WED@171551|Porphyromonadaceae 976|Bacteroidetes L May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO recR - - ko:K06187 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecR,Toprim_4 BECNEDJF_01612 411477.PARMER_03735 2.19e-138 391.0 COG0087@1|root,COG0087@2|Bacteria,4NEAN@976|Bacteroidetes,2FMS5@200643|Bacteroidia,22VWW@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit rplC - - ko:K02906 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L3 BECNEDJF_01613 411477.PARMER_03736 2.7e-139 394.0 COG0088@1|root,COG0088@2|Bacteria,4NEWZ@976|Bacteroidetes,2FM1W@200643|Bacteroidia,22VXN@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the polypeptide exit tunnel rplD GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0022626,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02926 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L4 BECNEDJF_01614 411477.PARMER_03737 1.66e-61 189.0 COG0089@1|root,COG0089@2|Bacteria,4NS7H@976|Bacteroidetes,2FT3A@200643|Bacteroidia,22YD1@171551|Porphyromonadaceae 976|Bacteroidetes J One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome rplW - - ko:K02892 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L23 BECNEDJF_01615 411477.PARMER_03738 5.7e-196 543.0 COG0090@1|root,COG0090@2|Bacteria,4NE8G@976|Bacteroidetes,2FN89@200643|Bacteroidia,22X09@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity rplB - - ko:K02886 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L2,Ribosomal_L2_C BECNEDJF_01616 1235803.C825_01073 2.12e-58 180.0 COG0185@1|root,COG0185@2|Bacteria,4NQ8T@976|Bacteroidetes,2FT46@200643|Bacteroidia,22Y5Y@171551|Porphyromonadaceae 976|Bacteroidetes J Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA rpsS GO:0000028,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006996,GO:0008150,GO:0009987,GO:0015935,GO:0016043,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0042254,GO:0042255,GO:0042274,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043933,GO:0044085,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071826,GO:0071840,GO:1990904 - ko:K02965 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S19 BECNEDJF_01617 411477.PARMER_03740 1.52e-89 263.0 COG0091@1|root,COG0091@2|Bacteria,4NQ8E@976|Bacteroidetes,2FS3J@200643|Bacteroidia,22XWQ@171551|Porphyromonadaceae 976|Bacteroidetes J The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome rplV - - ko:K02890 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L22 BECNEDJF_01618 411477.PARMER_03741 5.19e-168 470.0 COG0092@1|root,COG0092@2|Bacteria,4NE9F@976|Bacteroidetes,2FMYX@200643|Bacteroidia,22W3B@171551|Porphyromonadaceae 976|Bacteroidetes J Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation rpsC GO:0002181,GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02982 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - KH_2,Ribosomal_S3_C BECNEDJF_01619 1235803.C825_01070 3.95e-98 285.0 COG0197@1|root,COG0197@2|Bacteria,4NM87@976|Bacteroidetes,2FRZE@200643|Bacteroidia,22XNJ@171551|Porphyromonadaceae 976|Bacteroidetes J Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs rplP GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0019843,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0097159,GO:1901363,GO:1990904 - ko:K02878 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L16 BECNEDJF_01620 411477.PARMER_02401 0.0 2524.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,22W84@171551|Porphyromonadaceae 976|Bacteroidetes T histidine kinase DNA gyrase B - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y BECNEDJF_01622 411477.PARMER_01625 1.77e-282 774.0 COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,2FM9Q@200643|Bacteroidia,22X9B@171551|Porphyromonadaceae 976|Bacteroidetes M Barrel-sandwich domain of CusB or HlyD membrane-fusion - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 BECNEDJF_01623 411477.PARMER_01624 0.0 917.0 COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,2FMD9@200643|Bacteroidia,22WDN@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_01625 411477.PARMER_00195 5.02e-100 290.0 COG0735@1|root,COG0735@2|Bacteria,4NQND@976|Bacteroidetes,2FS2D@200643|Bacteroidia,22Y4N@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the Fur family - - - ko:K03711 - - - - ko00000,ko03000 - - - FUR BECNEDJF_01626 411477.PARMER_00196 0.0 1210.0 COG2217@1|root,COG2217@2|Bacteria,4NERS@976|Bacteroidetes,2FP0P@200643|Bacteroidia,22WFG@171551|Porphyromonadaceae 976|Bacteroidetes P cadmium-exporting ATPase cadA - 3.6.3.3,3.6.3.5 ko:K01534 - - - - ko00000,ko01000 3.A.3.6 - - E1-E2_ATPase,Hydrolase BECNEDJF_01627 411477.PARMER_00197 9.51e-245 671.0 COG1621@1|root,COG1621@2|Bacteria,4NG8H@976|Bacteroidetes,2FN43@200643|Bacteroidia,22ZAH@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 32 N-terminal domain - - - - - - - - - - - - Glyco_hydro_43 BECNEDJF_01628 1122931.AUAE01000024_gene3711 0.0 1023.0 COG1554@1|root,COG1554@2|Bacteria,4NFYU@976|Bacteroidetes,2FPE9@200643|Bacteroidia,22ZAF@171551|Porphyromonadaceae 976|Bacteroidetes G COG NOG26513 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_01629 1235803.C825_01085 0.0 897.0 COG1435@1|root,COG1435@2|Bacteria,4NE0A@976|Bacteroidetes,2FN01@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_01630 1235803.C825_01086 0.0 1676.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01631 411477.PARMER_00201 2.61e-160 453.0 COG3712@1|root,COG3712@2|Bacteria,4P0CS@976|Bacteroidetes,2FQ0A@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01632 411477.PARMER_00201 1.56e-53 176.0 COG3712@1|root,COG3712@2|Bacteria,4P0CS@976|Bacteroidetes,2FQ0A@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01633 411477.PARMER_00202 1.64e-142 402.0 COG1595@1|root,COG1595@2|Bacteria,4NRYN@976|Bacteroidetes,2FR9G@200643|Bacteroidia,22YSN@171551|Porphyromonadaceae 976|Bacteroidetes K ECF sigma factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_01634 999419.HMPREF1077_01747 1.04e-215 595.0 COG1409@1|root,COG1409@2|Bacteria,4NPFR@976|Bacteroidetes,2G2Q5@200643|Bacteroidia 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - - - - - - - - - - Metallophos BECNEDJF_01635 411477.PARMER_00205 2.65e-190 528.0 COG0613@1|root,COG0613@2|Bacteria,4PMUK@976|Bacteroidetes,2G0GP@200643|Bacteroidia 976|Bacteroidetes S PHP domain protein - - - - - - - - - - - - - BECNEDJF_01636 411477.PARMER_00206 0.0 1934.0 COG3250@1|root,COG3250@2|Bacteria,4NEP8@976|Bacteroidetes,2FMRW@200643|Bacteroidia,22X6P@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 2 - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_01637 411477.PARMER_00207 0.0 1017.0 COG3408@1|root,COG3408@2|Bacteria,4NJ97@976|Bacteroidetes,2FQFW@200643|Bacteroidia,22ZCK@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme - - - - - - - - - - - - Trehalase BECNEDJF_01638 411477.PARMER_00209 0.0 1134.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FNY3@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_01639 411477.PARMER_00210 0.0 2155.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01640 411477.PARMER_04256 0.0 1066.0 COG3119@1|root,COG3119@2|Bacteria,4NJ83@976|Bacteroidetes,2FM83@200643|Bacteroidia,22XH2@171551|Porphyromonadaceae 976|Bacteroidetes P Type I phosphodiesterase / nucleotide pyrophosphatase - - - - - - - - - - - - DUF4976,Sulfatase BECNEDJF_01641 411477.PARMER_04255 4.78e-218 600.0 COG0657@1|root,COG0657@2|Bacteria,4NH62@976|Bacteroidetes,2FRBT@200643|Bacteroidia,22XBQ@171551|Porphyromonadaceae 976|Bacteroidetes I alpha/beta hydrolase fold - - - - - - - - - - - - Abhydrolase_3,Peptidase_S9 BECNEDJF_01643 742725.HMPREF9450_00693 4.08e-71 224.0 COG0842@1|root,COG0842@2|Bacteria,4NDU0@976|Bacteroidetes,2FMJ3@200643|Bacteroidia 976|Bacteroidetes V Transport permease protein ybhS - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 BECNEDJF_01644 742725.HMPREF9450_00694 6.07e-253 695.0 COG0842@1|root,COG0842@2|Bacteria,4NFM0@976|Bacteroidetes,2FMNV@200643|Bacteroidia,22V7A@171550|Rikenellaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 BECNEDJF_01646 411477.PARMER_04197 2.19e-204 602.0 COG0060@1|root,COG0060@2|Bacteria,4NEYT@976|Bacteroidetes,2FM5R@200643|Bacteroidia,22W3E@171551|Porphyromonadaceae 976|Bacteroidetes J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) ileS GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1 BECNEDJF_01647 999419.HMPREF1077_00883 1.92e-209 583.0 28HHD@1|root,2Z7T3@2|Bacteria,4NGWB@976|Bacteroidetes,2FQ08@200643|Bacteroidia,22Y4U@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3810) - - - - - - - - - - - - DUF3810 BECNEDJF_01648 411477.PARMER_04199 8.61e-56 192.0 COG0646@1|root,COG1410@1|root,COG0646@2|Bacteria,COG1410@2|Bacteria,4NFRF@976|Bacteroidetes,2FMI7@200643|Bacteroidia,22WC9@171551|Porphyromonadaceae 976|Bacteroidetes E B12 binding domain metH - 2.1.1.13 ko:K00548 ko00270,ko00450,ko00670,ko01100,ko01110,ko01230,map00270,map00450,map00670,map01100,map01110,map01230 M00017 R00946,R09365 RC00035,RC00113,RC01241 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,B12-binding_2,Met_synt_B12,Pterin_bind,S-methyl_trans BECNEDJF_01650 411477.PARMER_03332 1.54e-272 746.0 COG1294@1|root,COG1294@2|Bacteria,4NHZU@976|Bacteroidetes,2FMIN@200643|Bacteroidia,22W6V@171551|Porphyromonadaceae 976|Bacteroidetes C Cytochrome C oxidase assembly protein cydB - 1.10.3.14 ko:K00426 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_II BECNEDJF_01651 411477.PARMER_03333 0.0 1028.0 COG1271@1|root,COG1271@2|Bacteria,4NG7U@976|Bacteroidetes,2FMV6@200643|Bacteroidia,22W3V@171551|Porphyromonadaceae 976|Bacteroidetes C oxidase, subunit cydA - 1.10.3.14 ko:K00425 ko00190,ko01100,ko02020,map00190,map01100,map02020 M00153 R11325 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.4.3 - - Cyt_bd_oxida_I BECNEDJF_01652 411477.PARMER_03334 1.64e-68 207.0 2E3BY@1|root,32YBB@2|Bacteria,4NVYN@976|Bacteroidetes,2FUJP@200643|Bacteroidia,22YMH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4492) - - - - - - - - - - - - DUF4492 BECNEDJF_01653 1235803.C825_05272 2.71e-06 48.5 COG1914@1|root,COG1914@2|Bacteria,4NENE@976|Bacteroidetes,2FP05@200643|Bacteroidia,22W56@171551|Porphyromonadaceae 976|Bacteroidetes P Natural resistance-associated macrophage protein mntH - - ko:K03322 - - - - ko00000,ko02000 2.A.55.2.6,2.A.55.3 - - Nramp,Usp BECNEDJF_01654 742725.HMPREF9450_01019 1.26e-115 335.0 COG0586@1|root,COG0586@2|Bacteria,4NHQA@976|Bacteroidetes,2G2Z5@200643|Bacteroidia,22UQ8@171550|Rikenellaceae 976|Bacteroidetes S SNARE associated Golgi protein - - - ko:K03975 - - - - ko00000 - - - SNARE_assoc BECNEDJF_01655 411477.PARMER_02340 0.0 1196.0 COG0008@1|root,COG0008@2|Bacteria,4NFCC@976|Bacteroidetes,2FMVI@200643|Bacteroidia,22W5Z@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA glnS - 6.1.1.18 ko:K01886 ko00970,ko01100,map00970,map01100 M00359,M00360 R03652 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1c,tRNA-synt_1c_C BECNEDJF_01656 411477.PARMER_02339 1.41e-293 807.0 COG0457@1|root,COG0457@2|Bacteria,4NG1I@976|Bacteroidetes,2FQPG@200643|Bacteroidia,22YCD@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_16,TPR_19,TPR_2,TPR_6,TPR_7,TPR_8 BECNEDJF_01657 411477.PARMER_02758 0.0 2004.0 COG0457@1|root,COG0697@1|root,COG0457@2|Bacteria,COG0697@2|Bacteria,4PKRH@976|Bacteroidetes,2G090@200643|Bacteroidia,23243@171551|Porphyromonadaceae 976|Bacteroidetes EG Protein of unknown function (DUF2723) - - - - - - - - - - - - DUF2723 BECNEDJF_01658 999419.HMPREF1077_01541 2.18e-155 434.0 COG0726@1|root,COG0726@2|Bacteria,4NM7D@976|Bacteroidetes,2FMF7@200643|Bacteroidia,22XKK@171551|Porphyromonadaceae 976|Bacteroidetes G polysaccharide deacetylase pgdA_1 - - - - - - - - - - - Polysacc_deac_1 BECNEDJF_01659 411477.PARMER_03402 3.05e-282 771.0 COG2067@1|root,COG2067@2|Bacteria,4NDZW@976|Bacteroidetes,2FPVJ@200643|Bacteroidia,22W00@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location OuterMembrane, score porV - - - - - - - - - - - - BECNEDJF_01660 411477.PARMER_03401 4.3e-111 319.0 COG0245@1|root,COG0245@2|Bacteria,4NP0N@976|Bacteroidetes,2FNVA@200643|Bacteroidia,22XNK@171551|Porphyromonadaceae 976|Bacteroidetes I Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) ispF - 4.6.1.12 ko:K01770 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R05637 RC00002,RC01440 ko00000,ko00001,ko00002,ko01000 - - - YgbB BECNEDJF_01661 411477.PARMER_03400 1.07e-74 223.0 COG0023@1|root,COG0023@2|Bacteria,4NS6M@976|Bacteroidetes,2FTIA@200643|Bacteroidia,22Y4X@171551|Porphyromonadaceae 976|Bacteroidetes J Translation initiation factor - - - ko:K03113 ko03013,map03013 - - - ko00000,ko00001,ko03012 - - - SUI1 BECNEDJF_01663 411479.BACUNI_03701 0.0 1568.0 COG3537@1|root,COG3537@2|Bacteria,4NI5B@976|Bacteroidetes,2FMQ3@200643|Bacteroidia,4AKKJ@815|Bacteroidaceae 976|Bacteroidetes G cog cog3537 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_01664 411479.BACUNI_03702 1.3e-198 549.0 2CEPY@1|root,2ZAJH@2|Bacteria,4NKJW@976|Bacteroidetes,2FPMU@200643|Bacteroidia,4AQ32@815|Bacteroidaceae 976|Bacteroidetes S Domain of unknown function (DUF5040) - - - - - - - - - - - - DUF5040 BECNEDJF_01665 411479.BACUNI_03703 8.88e-201 562.0 COG3538@1|root,COG3538@2|Bacteria,4NGY6@976|Bacteroidetes,2FM8H@200643|Bacteroidia,4AMK0@815|Bacteroidaceae 976|Bacteroidetes S Conserved protein - - - ko:K09704 - - - - ko00000 - - - Glyco_hydro_125 BECNEDJF_01666 999419.HMPREF1077_01184 1.17e-289 790.0 COG4225@1|root,COG4225@2|Bacteria,4NGSJ@976|Bacteroidetes,2FM7R@200643|Bacteroidia,22XG1@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 BECNEDJF_01669 411477.PARMER_03960 0.0 1863.0 COG4692@1|root,COG4692@2|Bacteria,4PKSV@976|Bacteroidetes,2G3H5@200643|Bacteroidia,2322S@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - 3.2.1.40 ko:K05989 - - - - ko00000,ko01000 - - - BNR_2,Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C,Bac_rhamnosid_N BECNEDJF_01670 411477.PARMER_03959 4.75e-67 203.0 COG0261@1|root,COG0261@2|Bacteria,4NQKP@976|Bacteroidetes,2G2BD@200643|Bacteroidia,231IE@171551|Porphyromonadaceae 976|Bacteroidetes J This protein binds to 23S rRNA in the presence of protein L20 rplU - - ko:K02888 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L21p BECNEDJF_01671 411477.PARMER_03958 3.83e-56 174.0 COG0211@1|root,COG0211@2|Bacteria,4NS7T@976|Bacteroidetes,2FTXU@200643|Bacteroidia,22YG4@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL27 family rpmA - - ko:K02899 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L27 BECNEDJF_01672 411477.PARMER_01642 0.0 1390.0 COG1506@1|root,COG1506@2|Bacteria,4NE2Q@976|Bacteroidetes,2FPZU@200643|Bacteroidia,22VXZ@171551|Porphyromonadaceae 976|Bacteroidetes E Dipeptidyl peptidase IV (DPP IV) N-terminal region - - - - - - - - - - - - DPPIV_N,Peptidase_S9 BECNEDJF_01673 411477.PARMER_01643 5.95e-194 536.0 COG2816@1|root,COG2816@2|Bacteria,4NKCV@976|Bacteroidetes,2FN61@200643|Bacteroidia,22YHY@171551|Porphyromonadaceae 976|Bacteroidetes L NADH pyrophosphatase zinc ribbon domain nudC - 3.6.1.22 ko:K03426 ko00760,ko01100,ko04146,map00760,map01100,map04146 - R00103,R03004,R11104 RC00002 ko00000,ko00001,ko01000 - - - NUDIX,NUDIX-like,zf-NADH-PPase BECNEDJF_01675 411477.PARMER_01644 1.33e-151 427.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FMDA@200643|Bacteroidia,22XHP@171551|Porphyromonadaceae 976|Bacteroidetes V Rad17 cell cycle checkpoint protein - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran BECNEDJF_01676 411477.PARMER_00967 0.0 879.0 COG1449@1|root,COG1449@2|Bacteria,4NFXW@976|Bacteroidetes,2FMRY@200643|Bacteroidia,22Z9T@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 57 amyA - 3.2.1.1 ko:K07405 ko00500,ko01100,map00500,map01100 - R02108,R02112,R11262 - ko00000,ko00001,ko01000 - GH57 - Glyco_hydro_57 BECNEDJF_01677 999419.HMPREF1077_00739 0.0 877.0 COG0438@1|root,COG0438@2|Bacteria,4NEWR@976|Bacteroidetes,2FMW0@200643|Bacteroidia,22ZW9@171551|Porphyromonadaceae 976|Bacteroidetes M Starch synthase catalytic domain gmhA - 2.4.1.346 ko:K13668 - - R11703,R11704 - ko00000,ko01000,ko01003 - GT4 - Glyco_transf_4,Glyco_transf_5,Glycos_transf_1 BECNEDJF_01678 411477.PARMER_00965 0.0 1069.0 COG3408@1|root,COG3408@2|Bacteria,4NF09@976|Bacteroidetes,2FMEX@200643|Bacteroidia,22X3H@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme - - - - - - - - - - - - GDE_C,GDE_N BECNEDJF_01679 411477.PARMER_02290 2.95e-283 774.0 COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,2FNJU@200643|Bacteroidia,22WJT@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF418) - - - ko:K07148 - - - - ko00000 - - - DUF1624,DUF418 BECNEDJF_01680 411477.PARMER_02289 9.4e-242 664.0 COG0225@1|root,COG0229@1|root,COG0225@2|Bacteria,COG0229@2|Bacteria,4NMAJ@976|Bacteroidetes,2FNTE@200643|Bacteroidia,22XGW@171551|Porphyromonadaceae 976|Bacteroidetes O Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine msrA - 1.8.4.11,1.8.4.12 ko:K12267 - - - - ko00000,ko01000 - - - PMSR,SelR BECNEDJF_01681 411477.PARMER_02288 1.03e-204 566.0 COG2240@1|root,COG2240@2|Bacteria,4NNJP@976|Bacteroidetes,2FNIJ@200643|Bacteroidia,22Z9M@171551|Porphyromonadaceae 976|Bacteroidetes H Phosphomethylpyrimidine kinase pdxK - 2.7.1.35 ko:K00868 ko00750,ko01100,map00750,map01100 - R00174,R01909,R02493 RC00002,RC00017 ko00000,ko00001,ko01000 - - - Phos_pyr_kin BECNEDJF_01684 411477.PARMER_02667 0.0 1894.0 COG0841@1|root,COG0841@2|Bacteria,4NGCI@976|Bacteroidetes,2FM1V@200643|Bacteroidia,22WWN@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran BECNEDJF_01685 411477.PARMER_02668 6.99e-243 668.0 COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,2FQSG@200643|Bacteroidia,22W5U@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23,OEP BECNEDJF_01686 999419.HMPREF1077_01589 0.0 926.0 COG1538@1|root,COG1538@2|Bacteria,4NGIX@976|Bacteroidetes,2FM9H@200643|Bacteroidia,22WV6@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_01687 411477.PARMER_02670 7.99e-64 216.0 COG1277@1|root,COG1277@2|Bacteria,4NI5T@976|Bacteroidetes,2FNVZ@200643|Bacteroidia,22W2G@171551|Porphyromonadaceae 976|Bacteroidetes E ABC-type transport system involved in multi-copper enzyme maturation permease component - - - - - - - - - - - - Peptidase_M1 BECNEDJF_01688 411477.PARMER_02670 0.0 1852.0 COG1277@1|root,COG1277@2|Bacteria,4NI5T@976|Bacteroidetes,2FNVZ@200643|Bacteroidia,22W2G@171551|Porphyromonadaceae 976|Bacteroidetes E ABC-type transport system involved in multi-copper enzyme maturation permease component - - - - - - - - - - - - Peptidase_M1 BECNEDJF_01689 411477.PARMER_02671 1.9e-212 586.0 COG1131@1|root,COG1131@2|Bacteria,4NFWM@976|Bacteroidetes,2FP8M@200643|Bacteroidia,22W8V@171551|Porphyromonadaceae 976|Bacteroidetes V AAA domain, putative AbiEii toxin, Type IV TA system - - - - - - - - - - - - ABC_tran BECNEDJF_01690 411477.PARMER_02672 1.04e-130 371.0 COG1592@1|root,COG1592@2|Bacteria,4NH0J@976|Bacteroidetes,2FNC9@200643|Bacteroidia,22WSM@171551|Porphyromonadaceae 976|Bacteroidetes C Rubrerythrin rbr GO:0003674,GO:0005488,GO:0005506,GO:0006950,GO:0006979,GO:0008150,GO:0043167,GO:0043169,GO:0046872,GO:0046914,GO:0050896 - - - - - - - - - - Rubrerythrin BECNEDJF_01691 411477.PARMER_02673 0.0 1025.0 COG0659@1|root,COG0659@2|Bacteria,4NF1C@976|Bacteroidetes,2FPEW@200643|Bacteroidia,22WP7@171551|Porphyromonadaceae 976|Bacteroidetes P Sulfate permease sulP - - ko:K03321 - - - - ko00000,ko02000 2.A.53.3 - - STAS,Sulfate_transp BECNEDJF_01694 411477.PARMER_02676 0.0 1862.0 COG3591@1|root,COG3591@2|Bacteria,4NG2K@976|Bacteroidetes,2FNQS@200643|Bacteroidia,22XGI@171551|Porphyromonadaceae 976|Bacteroidetes E Leucine-rich repeat (LRR) protein - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - Trypsin,Trypsin_2 BECNEDJF_01695 411477.PARMER_02677 2.69e-182 507.0 COG0731@1|root,COG0731@2|Bacteria,4NJEM@976|Bacteroidetes,2FMWY@200643|Bacteroidia,22WAC@171551|Porphyromonadaceae 976|Bacteroidetes C radical SAM domain protein - - - - - - - - - - - - Fer4_14,Radical_SAM BECNEDJF_01696 411477.PARMER_02678 0.0 1336.0 COG1555@1|root,COG1555@2|Bacteria,4NE88@976|Bacteroidetes,2FP15@200643|Bacteroidia,22X8S@171551|Porphyromonadaceae 976|Bacteroidetes L Psort location OuterMembrane, score - - - - - - - - - - - - HHH_3 BECNEDJF_01697 411477.PARMER_02679 6.37e-190 527.0 COG1555@1|root,COG1555@2|Bacteria,4NUGB@976|Bacteroidetes,2FUT7@200643|Bacteroidia,231NR@171551|Porphyromonadaceae 976|Bacteroidetes L photosystem II stabilization - - - - - - - - - - - - - BECNEDJF_01699 411477.PARMER_02681 4.06e-129 367.0 2CI1G@1|root,2Z7JA@2|Bacteria,4NF1T@976|Bacteroidetes,2FPFD@200643|Bacteroidia,22XYB@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4294) - - - - - - - - - - - - DUF4294 BECNEDJF_01700 411477.PARMER_02682 1.34e-125 357.0 COG0566@1|root,COG0566@2|Bacteria,4NM8C@976|Bacteroidetes,2FS50@200643|Bacteroidia,22XKS@171551|Porphyromonadaceae 976|Bacteroidetes J RNA methyltransferase spoU - - - - - - - - - - - SpoU_methylase BECNEDJF_01702 411477.PARMER_00311 9.24e-269 736.0 COG1215@1|root,COG1215@2|Bacteria,4NFI8@976|Bacteroidetes,2FQAZ@200643|Bacteroidia,22W2Z@171551|Porphyromonadaceae 976|Bacteroidetes M Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - GT87 BECNEDJF_01705 411477.PARMER_00315 7.4e-203 573.0 COG0457@1|root,COG0457@2|Bacteria,4NFMG@976|Bacteroidetes,2FN4A@200643|Bacteroidia,2307T@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - GerE,TPR_10,TPR_12,TPR_19,TPR_7,TPR_8 BECNEDJF_01706 411477.PARMER_00315 3.28e-112 337.0 COG0457@1|root,COG0457@2|Bacteria,4NFMG@976|Bacteroidetes,2FN4A@200643|Bacteroidia,2307T@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - GerE,TPR_10,TPR_12,TPR_19,TPR_7,TPR_8 BECNEDJF_01707 411477.PARMER_01666 4.35e-115 330.0 COG1595@1|root,COG1595@2|Bacteria,4NP39@976|Bacteroidetes,2FP42@200643|Bacteroidia,22Y53@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_01708 411477.PARMER_01667 2.8e-257 704.0 COG0180@1|root,COG0180@2|Bacteria,4NETX@976|Bacteroidetes,2FMAT@200643|Bacteroidia,22VZJ@171551|Porphyromonadaceae 976|Bacteroidetes J Tryptophanyl-tRNA synthetase trpS - 6.1.1.2 ko:K01867 ko00970,map00970 M00359,M00360 R03664 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - tRNA-synt_1b BECNEDJF_01710 411477.PARMER_01669 1.77e-250 686.0 28KNF@1|root,2ZA6N@2|Bacteria,4NGZC@976|Bacteroidetes,2FPMJ@200643|Bacteroidia,22W2H@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF5128,TolB_like BECNEDJF_01712 999419.HMPREF1077_02481 4.26e-113 324.0 COG0735@1|root,COG0735@2|Bacteria,4NM8S@976|Bacteroidetes,2FN4T@200643|Bacteroidia,22Y5G@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the Fur family fur - - ko:K03711 - - - - ko00000,ko03000 - - - FUR BECNEDJF_01713 411477.PARMER_01126 2.8e-159 446.0 COG4912@1|root,COG4912@2|Bacteria,4NUAZ@976|Bacteroidetes,2FQ8F@200643|Bacteroidia,22YEE@171551|Porphyromonadaceae 976|Bacteroidetes L DNA alkylation repair enzyme - - - - - - - - - - - - DNA_alkylation BECNEDJF_01714 411477.PARMER_01127 0.0 1332.0 COG0457@1|root,COG0457@2|Bacteria,4NFIY@976|Bacteroidetes,2FMXX@200643|Bacteroidia,22WNA@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family M49 - - 3.4.14.4 ko:K01277 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M49 BECNEDJF_01716 411477.PARMER_01912 1.37e-312 850.0 COG4806@1|root,COG4806@2|Bacteria,4NHKW@976|Bacteroidetes,2FNVS@200643|Bacteroidia,22W7A@171551|Porphyromonadaceae 976|Bacteroidetes G L-rhamnose isomerase (RhaA) rhaA GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0008740,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0019321,GO:0019324,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.14 ko:K01813 ko00051,ko01120,map00051,map01120 - R02437 RC00434 ko00000,ko00001,ko01000 - - - RhaA BECNEDJF_01717 999419.HMPREF1077_02732 0.0 945.0 COG1070@1|root,COG1070@2|Bacteria,4NIJC@976|Bacteroidetes,2FP4C@200643|Bacteroidia,22X3Q@171551|Porphyromonadaceae 976|Bacteroidetes G FGGY family of carbohydrate kinases, N-terminal domain rhaB GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009056,GO:0016052,GO:0019299,GO:0019301,GO:0019318,GO:0019320,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 2.7.1.5,2.7.1.51 ko:K00848,ko:K00879 ko00040,ko00051,ko01120,map00040,map00051,map01120 - R01902,R03014,R03241 RC00002,RC00017 ko00000,ko00001,ko01000 - - - FGGY_C,FGGY_N BECNEDJF_01718 411477.PARMER_00267 0.0 1135.0 COG0513@1|root,COG0513@2|Bacteria,4NEJV@976|Bacteroidetes,2FMB6@200643|Bacteroidia,22W44@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the DEAD box helicase family - - 3.6.4.13 ko:K05592 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03009,ko03019 - - - DEAD,DbpA,Helicase_C BECNEDJF_01719 411477.PARMER_00265 1.34e-257 706.0 COG2365@1|root,COG2365@2|Bacteria,4NMQ7@976|Bacteroidetes,2FMCH@200643|Bacteroidia,22XUN@171551|Porphyromonadaceae 976|Bacteroidetes T Tyrosine phosphatase family - - 3.1.3.48 ko:K01104 - - - - ko00000,ko01000 - - - Y_phosphatase3 BECNEDJF_01720 411477.PARMER_00264 5.24e-230 632.0 COG0524@1|root,COG0524@2|Bacteria,4NG11@976|Bacteroidetes,2FMAX@200643|Bacteroidia,22XEA@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB BECNEDJF_01721 411477.PARMER_00262 1.07e-143 405.0 COG0794@1|root,COG0794@2|Bacteria,4NED8@976|Bacteroidetes,2FMXM@200643|Bacteroidia,22X6D@171551|Porphyromonadaceae 976|Bacteroidetes M Iron dicitrate transport regulator FecR kdsD - 5.3.1.13 ko:K06041 ko00540,ko01100,map00540,map01100 M00063 R01530 RC00541 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CBS,SIS BECNEDJF_01722 411477.PARMER_00263 0.0 877.0 COG0612@1|root,COG0612@2|Bacteria,4NEE4@976|Bacteroidetes,2FN50@200643|Bacteroidia,22WUV@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the peptidase M16 family - - - - - - - - - - - - Peptidase_M16,Peptidase_M16_C BECNEDJF_01723 411477.PARMER_00261 0.0 887.0 COG1115@1|root,COG1115@2|Bacteria,4NDX7@976|Bacteroidetes,2FMFZ@200643|Bacteroidia,22XG3@171551|Porphyromonadaceae 976|Bacteroidetes E Psort location CytoplasmicMembrane, score 10.00 agcS - - ko:K03310 - - - - ko00000 2.A.25 - - Na_Ala_symp BECNEDJF_01724 411477.PARMER_00260 2.09e-125 356.0 COG1853@1|root,COG1853@2|Bacteria,4NNFP@976|Bacteroidetes,2FPWU@200643|Bacteroidia,22XVU@171551|Porphyromonadaceae 976|Bacteroidetes S Conserved protein domain typically associated with flavoprotein - - - - - - - - - - - - Flavin_Reduct BECNEDJF_01725 411477.PARMER_00259 8.26e-316 861.0 COG1538@1|root,COG1538@2|Bacteria,4NJ4M@976|Bacteroidetes,2FN0S@200643|Bacteroidia,22WDV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP BECNEDJF_01726 411477.PARMER_00258 4.29e-253 700.0 COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,2FM9Q@200643|Bacteroidia,22W2T@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3 BECNEDJF_01727 411477.PARMER_00257 0.0 1556.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FP64@200643|Bacteroidia,231FQ@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_01728 411477.PARMER_00256 6.23e-146 412.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FNWN@200643|Bacteroidia,231SS@171551|Porphyromonadaceae 976|Bacteroidetes V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran BECNEDJF_01729 411477.PARMER_00255 0.0 1570.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22Z9G@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_01730 411477.PARMER_00254 3.47e-90 264.0 COG2050@1|root,COG2050@2|Bacteria,4NM7W@976|Bacteroidetes,2FS5M@200643|Bacteroidia,22YUF@171551|Porphyromonadaceae 976|Bacteroidetes Q Thioesterase superfamily paaI - - ko:K02614 ko00360,map00360 - R09840 RC00004,RC00014 ko00000,ko00001,ko01000 - - - 4HBT BECNEDJF_01731 411477.PARMER_00253 0.0 962.0 COG0215@1|root,COG0215@2|Bacteria,4NE3Y@976|Bacteroidetes,2FM9D@200643|Bacteroidia,22WDE@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-I aminoacyl-tRNA synthetase family cysS - 6.1.1.16 ko:K01883 ko00970,map00970 M00359,M00360 R03650 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DALR_2,tRNA-synt_1e BECNEDJF_01732 411477.PARMER_00252 0.0 1231.0 COG5434@1|root,COG5434@2|Bacteria,4NDWX@976|Bacteroidetes,2FMZA@200643|Bacteroidia,22X8E@171551|Porphyromonadaceae 976|Bacteroidetes M Parallel beta-helix repeats glaB - - - - - - - - - - - Beta_helix BECNEDJF_01733 411477.PARMER_00251 0.0 1216.0 COG0821@1|root,COG0821@2|Bacteria,4NE63@976|Bacteroidetes,2FM97@200643|Bacteroidia,22WAH@171551|Porphyromonadaceae 976|Bacteroidetes I Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate ispG GO:0003674,GO:0003824,GO:0006081,GO:0006082,GO:0006090,GO:0006629,GO:0006644,GO:0006720,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008299,GO:0008610,GO:0008654,GO:0009058,GO:0009240,GO:0009987,GO:0016491,GO:0016725,GO:0019288,GO:0019637,GO:0019682,GO:0019752,GO:0032787,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0046429,GO:0046490,GO:0052592,GO:0055114,GO:0071704,GO:0090407,GO:1901135,GO:1901576 1.17.7.1,1.17.7.3 ko:K03526 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00096 R08689,R10859 RC01486 ko00000,ko00001,ko00002,ko01000 - - - GcpE BECNEDJF_01734 411477.PARMER_00249 8.44e-107 309.0 COG0041@1|root,COG0041@2|Bacteria,4NME9@976|Bacteroidetes,2FMWN@200643|Bacteroidia,22XMM@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR) purE - 5.4.99.18 ko:K01588 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R07405 RC01947 ko00000,ko00001,ko00002,ko01000 - - - AIRC BECNEDJF_01735 411477.PARMER_00248 1.4e-32 115.0 COG0509@1|root,COG0509@2|Bacteria,4NQ35@976|Bacteroidetes,2FT3J@200643|Bacteroidia,22Y67@171551|Porphyromonadaceae 976|Bacteroidetes E The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein gcvH - - ko:K02437 ko00260,ko00630,ko01100,ko01110,ko01130,ko01200,map00260,map00630,map01100,map01110,map01130,map01200 M00532 R01221 RC00022,RC02834 ko00000,ko00001,ko00002 - - - GCV_H BECNEDJF_01736 411477.PARMER_01379 4.35e-285 778.0 COG0707@1|root,COG0707@2|Bacteria,4PKSS@976|Bacteroidetes,2FMCT@200643|Bacteroidia,22WGK@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 1 - - - - - - - - - - - - Glyco_trans_1_3 BECNEDJF_01737 411477.PARMER_01378 0.0 862.0 COG2873@1|root,COG2873@2|Bacteria,4NE27@976|Bacteroidetes,2FMQX@200643|Bacteroidia,22XJV@171551|Porphyromonadaceae 976|Bacteroidetes E Cys/Met metabolism PLP-dependent enzyme metZ - 2.5.1.49 ko:K01740,ko:K10764 ko00270,ko00920,ko01100,map00270,map00920,map01100 - R01287,R01288,R04859 RC00020,RC02821,RC02848 ko00000,ko00001,ko01000 - - - Cys_Met_Meta_PP BECNEDJF_01738 411477.PARMER_01377 9.03e-312 850.0 COG0534@1|root,COG0534@2|Bacteria,4NHCU@976|Bacteroidetes,2FMEH@200643|Bacteroidia,22VWJ@171551|Porphyromonadaceae 976|Bacteroidetes V Mate efflux family protein - - - - - - - - - - - - MatE BECNEDJF_01739 411477.PARMER_03587 6.49e-217 599.0 COG0039@1|root,COG0039@2|Bacteria,4NEJ7@976|Bacteroidetes,2FM7E@200643|Bacteroidia,22WCV@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the reversible oxidation of malate to oxaloacetate mdh - 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N BECNEDJF_01740 411477.PARMER_03588 1.95e-293 800.0 COG1092@1|root,COG1092@2|Bacteria,4NG9S@976|Bacteroidetes,2FN8H@200643|Bacteroidia,22WK0@171551|Porphyromonadaceae 976|Bacteroidetes J SAM-dependent methyltransferase rlmI - 2.1.1.191 ko:K06969 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_SAM BECNEDJF_01741 411477.PARMER_03589 8.55e-135 382.0 COG0349@1|root,COG0349@2|Bacteria,4NP3B@976|Bacteroidetes,2FN2U@200643|Bacteroidia,22XW2@171551|Porphyromonadaceae 976|Bacteroidetes L 3'-5' exonuclease rnd - - - - - - - - - - - DNA_pol_A_exo1 BECNEDJF_01742 411477.PARMER_03590 8.34e-127 360.0 2AIA7@1|root,318R1@2|Bacteria,4NQPK@976|Bacteroidetes,2FPYF@200643|Bacteroidia,22Y48@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5063) - - - - - - - - - - - - DUF5063 BECNEDJF_01744 411477.PARMER_02284 0.0 963.0 COG1453@1|root,COG1453@2|Bacteria,4NGCW@976|Bacteroidetes,2FPG8@200643|Bacteroidia,22WYY@171551|Porphyromonadaceae 976|Bacteroidetes S Aldo/keto reductase family - - - ko:K07079 - - - - ko00000 - - - Aldo_ket_red,Fer4_17 BECNEDJF_01745 411477.PARMER_02285 0.0 961.0 COG0348@1|root,COG1143@1|root,COG0348@2|Bacteria,COG1143@2|Bacteria,4NHSX@976|Bacteroidetes,2FN5F@200643|Bacteroidia,22W4S@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain yccM - - - - - - - - - - - Fer4,Fer4_5,Fer4_7,Fer4_9 BECNEDJF_01746 411477.PARMER_02286 1.08e-215 594.0 COG0627@1|root,COG0627@2|Bacteria,4NGI8@976|Bacteroidetes,2FQ6R@200643|Bacteroidia,2304Q@171551|Porphyromonadaceae 976|Bacteroidetes S Putative esterase xynZ - - - - - - - - - - - Esterase BECNEDJF_01748 411477.PARMER_03206 0.0 916.0 COG1082@1|root,COG2133@1|root,COG1082@2|Bacteria,COG2133@2|Bacteria,4NFKF@976|Bacteroidetes,2FRR2@200643|Bacteroidia,22XIX@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 BECNEDJF_01749 411477.PARMER_03207 8.85e-76 227.0 2EGII@1|root,33AAP@2|Bacteria,4NXMZ@976|Bacteroidetes,2FVPI@200643|Bacteroidia,2314H@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4890 BECNEDJF_01750 411477.PARMER_03209 0.0 1082.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FPTV@200643|Bacteroidia,22XDP@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Glyco_hydro_20,Glyco_hydro_20b BECNEDJF_01753 999419.HMPREF1077_02611 2.2e-62 192.0 2EP0A@1|root,33GM5@2|Bacteria,4NYGM@976|Bacteroidetes,2FUEY@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01755 999419.HMPREF1077_02588 0.0 877.0 COG1541@1|root,COG1541@2|Bacteria,4NGRR@976|Bacteroidetes,2FNC4@200643|Bacteroidia,22XDE@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) - - 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 - R02539 RC00004,RC00014 ko00000,ko00001,ko01000 - - - AMP-binding,AMP-binding_C_2 BECNEDJF_01756 411477.PARMER_02511 1.69e-93 273.0 COG4747@1|root,COG4747@2|Bacteria,4NQIW@976|Bacteroidetes,2FS2U@200643|Bacteroidia,22YBG@171551|Porphyromonadaceae 976|Bacteroidetes S ACT domain protein - - - - - - - - - - - - ACT BECNEDJF_01757 411477.PARMER_02512 1.33e-187 521.0 COG4105@1|root,COG4105@2|Bacteria,4NJ5A@976|Bacteroidetes,2FNAY@200643|Bacteroidia,22WG7@171551|Porphyromonadaceae 976|Bacteroidetes S outer membrane assembly lipoprotein YfiO yfiO - - ko:K05807 - - - - ko00000,ko02000 1.B.33.1 - - YfiO BECNEDJF_01758 411477.PARMER_02513 4.29e-70 211.0 2CT4B@1|root,32SSJ@2|Bacteria,4NQ76@976|Bacteroidetes,2FTC9@200643|Bacteroidia,22Y4I@171551|Porphyromonadaceae 976|Bacteroidetes S Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits rpoZ - - - - - - - - - - - RNA_pol_Rpb6 BECNEDJF_01759 411477.PARMER_02514 1.24e-94 277.0 2E8SV@1|root,3333M@2|Bacteria,4NSHV@976|Bacteroidetes,2FV1F@200643|Bacteroidia,22YEX@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4293) - - - - - - - - - - - - DUF4293 BECNEDJF_01760 411479.BACUNI_03844 1.51e-70 236.0 COG1629@1|root,COG4771@2|Bacteria,4NDU8@976|Bacteroidetes,2FMRZ@200643|Bacteroidia,4AKS4@815|Bacteroidaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_01761 411479.BACUNI_03843 0.0 1041.0 COG4198@1|root,COG4198@2|Bacteria,4NI11@976|Bacteroidetes,2FN1W@200643|Bacteroidia,4ANK0@815|Bacteroidaceae 976|Bacteroidetes S Susd and RagB outer membrane lipoprotein - - - - - - - - - - - - SusD-like BECNEDJF_01763 411477.PARMER_00282 0.0 2336.0 COG3250@1|root,COG3250@2|Bacteria,4NHBP@976|Bacteroidetes,2FPQV@200643|Bacteroidia 976|Bacteroidetes G Glycosyl hydrolases family 2, TIM barrel domain - - - - - - - - - - - - Bgal_small_N,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_01764 411477.PARMER_01639 2.1e-196 548.0 COG4409@1|root,COG4409@2|Bacteria,4NFNK@976|Bacteroidetes,2FQR6@200643|Bacteroidia,231H0@171551|Porphyromonadaceae 976|Bacteroidetes G BNR/Asp-box repeat - - 3.2.1.18 ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 - R04018 RC00028,RC00077 ko00000,ko00001,ko01000,ko02042 - GH33 - BNR_2,BNR_assoc_N BECNEDJF_01765 411477.PARMER_01640 0.0 994.0 COG3119@1|root,COG3119@2|Bacteria,4NFGI@976|Bacteroidetes,2FMUC@200643|Bacteroidia 976|Bacteroidetes P COG COG3119 Arylsulfatase A and related enzymes - - - - - - - - - - - - DUF4976,Sulfatase BECNEDJF_01766 411477.PARMER_01641 0.0 1075.0 COG4409@1|root,COG4409@2|Bacteria,4NFNK@976|Bacteroidetes,2FNCR@200643|Bacteroidia,22ZYS@171551|Porphyromonadaceae 976|Bacteroidetes G N-terminal domain of BNR-repeat neuraminidase - - 3.2.1.18 ko:K01186 ko00511,ko00600,ko04142,map00511,map00600,map04142 - R04018 RC00028,RC00077 ko00000,ko00001,ko01000,ko02042 - GH33 - BNR_2,BNR_3,BNR_assoc_N BECNEDJF_01768 411477.PARMER_03899 0.0 1587.0 COG0466@1|root,COG0466@2|Bacteria,4NE1G@976|Bacteroidetes,2FNKR@200643|Bacteroidia,22X0E@171551|Porphyromonadaceae 976|Bacteroidetes O ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner lon - 3.4.21.53 ko:K01338 ko04112,map04112 - - - ko00000,ko00001,ko01000,ko01002 - - - AAA,LON_substr_bdg,Lon_C BECNEDJF_01769 411477.PARMER_03898 2.13e-137 388.0 COG3039@1|root,COG3039@2|Bacteria,4NGW9@976|Bacteroidetes,2FQ99@200643|Bacteroidia,22WBT@171551|Porphyromonadaceae 976|Bacteroidetes L PFAM Transposase domain (DUF772) - - - - - - - - - - - - DDE_Tnp_1_2,DUF772 BECNEDJF_01770 411477.PARMER_03921 3.32e-214 591.0 COG0101@1|root,COG0101@2|Bacteria,4NFDC@976|Bacteroidetes,2FP2H@200643|Bacteroidia,22WF1@171551|Porphyromonadaceae 976|Bacteroidetes J Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs truA GO:0001522,GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009982,GO:0009987,GO:0010467,GO:0016070,GO:0016853,GO:0016866,GO:0031119,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:1901360 5.4.99.12 ko:K06173 - - - - ko00000,ko01000,ko03016 - - - PseudoU_synth_1 BECNEDJF_01771 411477.PARMER_03920 0.0 984.0 COG0490@1|root,COG2985@1|root,COG0490@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia,22XD6@171551|Porphyromonadaceae 976|Bacteroidetes P Predicted Permease Membrane Region - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C BECNEDJF_01772 411477.PARMER_03922 0.0 1374.0 COG0210@1|root,COG0507@1|root,COG0210@2|Bacteria,COG0507@2|Bacteria,4NF6J@976|Bacteroidetes,2FM19@200643|Bacteroidia,22X68@171551|Porphyromonadaceae 976|Bacteroidetes L COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member uvrD2 - - - - - - - - - - - HRDC,HTH_40,Herpes_Helicase,PIF1,UvrD_C_2 BECNEDJF_01773 411477.PARMER_03924 8.04e-135 383.0 2DVBG@1|root,32UZ2@2|Bacteria,4NSV1@976|Bacteroidetes,2FPAK@200643|Bacteroidia,22YFN@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4923) - - - - - - - - - - - - DUF4923 BECNEDJF_01774 411477.PARMER_03925 1.41e-241 663.0 COG0191@1|root,COG0191@2|Bacteria,4NF5C@976|Bacteroidetes,2FMMR@200643|Bacteroidia,22WHF@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate fba - 4.1.2.13 ko:K01624 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003,M00165,M00167,M00344,M00345 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - F_bP_aldolase BECNEDJF_01775 411477.PARMER_03926 4.78e-55 171.0 COG0254@1|root,COG0254@2|Bacteria,4NS7P@976|Bacteroidetes,2FTUG@200643|Bacteroidia,22YDW@171551|Porphyromonadaceae 976|Bacteroidetes J 50S ribosomal protein L31 type B rpmE2 - - ko:K02909 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L31 BECNEDJF_01776 411477.PARMER_03927 6.46e-266 728.0 COG2334@1|root,COG2334@2|Bacteria,4NH00@976|Bacteroidetes,2FKYD@200643|Bacteroidia,22XFX@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphotransferase enzyme family mdsC - - - - - - - - - - - APH BECNEDJF_01777 411477.PARMER_03928 8.61e-132 374.0 COG0664@1|root,COG0664@2|Bacteria,4NNJE@976|Bacteroidetes,2FMVH@200643|Bacteroidia,22XG7@171551|Porphyromonadaceae 976|Bacteroidetes T Cyclic nucleotide-binding domain protein - - - - - - - - - - - - cNMP_binding BECNEDJF_01778 411477.PARMER_03929 1.84e-283 774.0 COG1835@1|root,COG1835@2|Bacteria,4NEW1@976|Bacteroidetes,2FN9M@200643|Bacteroidia,22W3U@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 BECNEDJF_01779 411477.PARMER_03931 1.5e-257 707.0 COG0472@1|root,COG0472@2|Bacteria,4NGKM@976|Bacteroidetes,2FM86@200643|Bacteroidia,22W3P@171551|Porphyromonadaceae 976|Bacteroidetes M UDP-N-acetylmuramyl pentapeptide phosphotransferase tagO - - - - - - - - - - - Glycos_transf_4 BECNEDJF_01780 411477.PARMER_03932 3.5e-291 795.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMSD@200643|Bacteroidia,22WMZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.336 ko:K02472 ko00520,ko05111,map00520,map05111 - R03317 RC00291 ko00000,ko00001,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N BECNEDJF_01781 411477.PARMER_03933 0.0 890.0 COG2244@1|root,COG2244@2|Bacteria,4NEGZ@976|Bacteroidetes,2FNUG@200643|Bacteroidia,22WG6@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - MatE,Polysacc_synt BECNEDJF_01782 411477.PARMER_03934 1.71e-238 655.0 COG0438@1|root,COG0438@2|Bacteria,4PIFN@976|Bacteroidetes,2FT6Y@200643|Bacteroidia 976|Bacteroidetes M Glycosyltransferase, group 1 family - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 BECNEDJF_01783 411477.PARMER_03935 1.05e-292 801.0 2EP1K@1|root,33GNF@2|Bacteria,4NYEQ@976|Bacteroidetes,2G1S1@200643|Bacteroidia,2315J@171551|Porphyromonadaceae 976|Bacteroidetes S O-antigen ligase like membrane protein - - - - - - - - - - - - O-antigen_lig BECNEDJF_01784 411477.PARMER_03936 3.89e-243 669.0 COG0438@1|root,COG0438@2|Bacteria,4NPNN@976|Bacteroidetes,2FRYN@200643|Bacteroidia,22YQZ@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 BECNEDJF_01785 411477.PARMER_03937 1.36e-119 349.0 COG3307@1|root,COG3307@2|Bacteria,4NF1G@976|Bacteroidetes,2FSH9@200643|Bacteroidia,230KP@171551|Porphyromonadaceae 976|Bacteroidetes M TupA-like ATPgrasp - - - - - - - - - - - - ATPgrasp_TupA BECNEDJF_01786 411477.PARMER_03939 8.01e-97 281.0 COG0110@1|root,COG0110@2|Bacteria,4P6DG@976|Bacteroidetes,2G32B@200643|Bacteroidia 976|Bacteroidetes H Hexapeptide repeat of succinyl-transferase - - - - - - - - - - - - Hexapep_2 BECNEDJF_01787 411477.PARMER_03940 4.49e-169 472.0 COG1922@1|root,COG1922@2|Bacteria,4NJGT@976|Bacteroidetes,2FPBY@200643|Bacteroidia,22XRP@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the glycosyltransferase 26 family - - 2.4.1.180,2.4.1.187 ko:K02852,ko:K05946 ko05111,map05111 - - - ko00000,ko00001,ko01000,ko01003 - GT26 - Glyco_tran_WecB BECNEDJF_01788 411477.PARMER_03941 1.84e-08 55.5 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase - - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 BECNEDJF_01789 999419.HMPREF1077_01073 3.41e-233 645.0 COG0381@1|root,COG0381@2|Bacteria,4NGBD@976|Bacteroidetes,2FM5D@200643|Bacteroidia,22W64@171551|Porphyromonadaceae 976|Bacteroidetes G UDP-N-acetylglucosamine 2-epimerase - - 5.1.3.14 ko:K01791 ko00520,ko01100,ko05111,map00520,map01100,map05111 M00362 R00420 RC00290 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Epimerase_2 BECNEDJF_01791 411477.PARMER_00191 0.0 1900.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01792 411477.PARMER_01502 3.48e-268 734.0 COG1994@1|root,COG1994@2|Bacteria,4P0HH@976|Bacteroidetes,2FQBX@200643|Bacteroidia 976|Bacteroidetes S Peptidase M50 - - - - - - - - - - - - - BECNEDJF_01793 411477.PARMER_01503 0.0 1102.0 COG0793@1|root,COG0793@2|Bacteria,4NDWU@976|Bacteroidetes,2FM0W@200643|Bacteroidia,22W1I@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the peptidase S41A family prc - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ,PDZ_2,Peptidase_S41 BECNEDJF_01794 411477.PARMER_01504 7.95e-224 618.0 COG0524@1|root,COG0524@2|Bacteria,4NIHI@976|Bacteroidetes,2FPRJ@200643|Bacteroidia,22WDP@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - - - - - - - - - - - PfkB BECNEDJF_01796 411477.PARMER_02347 6.65e-315 858.0 COG1538@1|root,COG1538@2|Bacteria,4NJ4M@976|Bacteroidetes,2FN0S@200643|Bacteroidia,22WDV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP BECNEDJF_01797 411477.PARMER_02348 1.09e-276 759.0 COG0845@1|root,COG0845@2|Bacteria,4NDUH@976|Bacteroidetes,2FM9Q@200643|Bacteroidia,22W2T@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 BECNEDJF_01798 411477.PARMER_02349 6.8e-83 252.0 COG2070@1|root,COG2070@2|Bacteria,4NF8Z@976|Bacteroidetes,2FMYA@200643|Bacteroidia,22X2W@171551|Porphyromonadaceae 976|Bacteroidetes S 2-nitropropane dioxygenase fabK - 1.3.1.9 ko:K02371 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00083 R04429,R04724,R04955,R04958,R04961,R04966,R04969,R07765 RC00052,RC00076 ko00000,ko00001,ko00002,ko01000,ko01004 - - - NMO BECNEDJF_01799 411477.PARMER_01468 3.56e-86 253.0 COG0234@1|root,COG0234@2|Bacteria,4NRE1@976|Bacteroidetes,2FTDY@200643|Bacteroidia,230V1@171551|Porphyromonadaceae 976|Bacteroidetes O Chaperonin 10 Kd subunit - - - - - - - - - - - - Cpn10 BECNEDJF_01800 411477.PARMER_01469 1.23e-112 325.0 2924H@1|root,2ZPPH@2|Bacteria,4NNST@976|Bacteroidetes,2FR7C@200643|Bacteroidia,22YFV@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4251) - - - - - - - - - - - - DUF4251 BECNEDJF_01801 411477.PARMER_01470 0.0 870.0 COG0534@1|root,COG0534@2|Bacteria,4NDUF@976|Bacteroidetes,2FMX6@200643|Bacteroidia,22WP6@171551|Porphyromonadaceae 976|Bacteroidetes V Multidrug transporter MatE - - - - - - - - - - - - MatE BECNEDJF_01802 411477.PARMER_01471 8.36e-252 691.0 COG1120@1|root,COG1120@2|Bacteria,4NG1Q@976|Bacteroidetes,2FMCI@200643|Bacteroidia,22WS6@171551|Porphyromonadaceae 976|Bacteroidetes HP ATP-binding protein - - 3.6.3.34 ko:K02013 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.14 - - ABC_tran BECNEDJF_01803 411477.PARMER_01473 2.9e-231 638.0 COG0609@1|root,COG0609@2|Bacteria,4NEDU@976|Bacteroidetes,2FNDK@200643|Bacteroidia,22WJI@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily - - - ko:K02015 ko02010,map02010 M00240 - - ko00000,ko00001,ko00002,ko02000 3.A.1.14 - - FecCD BECNEDJF_01804 411477.PARMER_01472 0.0 2511.0 COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia,231P1@171551|Porphyromonadaceae 976|Bacteroidetes T helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y BECNEDJF_01805 411477.PARMER_01474 4.11e-222 611.0 COG1524@1|root,COG1524@2|Bacteria,4NIUS@976|Bacteroidetes,2FP4Q@200643|Bacteroidia,22W5X@171551|Porphyromonadaceae 976|Bacteroidetes S Metalloenzyme superfamily - - - - - - - - - - - - CHB_HEX_C_1,Fn3_assoc,PA14,Phosphodiest BECNEDJF_01807 411477.PARMER_01476 3.53e-296 807.0 COG1331@1|root,COG1331@2|Bacteria,4PKHP@976|Bacteroidetes,2G06V@200643|Bacteroidia,22X55@171551|Porphyromonadaceae 976|Bacteroidetes O Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 BECNEDJF_01808 411477.PARMER_01477 0.0 1322.0 COG4225@1|root,COG4225@2|Bacteria,4NG6C@976|Bacteroidetes,2FNB0@200643|Bacteroidia,22WUT@171551|Porphyromonadaceae 976|Bacteroidetes S Heparinase II/III-like protein - - - - - - - - - - - - Hepar_II_III BECNEDJF_01809 999419.HMPREF1077_00330 0.0 2000.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia,22XIY@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01810 999419.HMPREF1077_00329 0.0 1055.0 COG0614@1|root,COG0614@2|Bacteria,4NIFM@976|Bacteroidetes,2G3HP@200643|Bacteroidia,22XNI@171551|Porphyromonadaceae 976|Bacteroidetes P Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_01811 999419.HMPREF1077_00328 0.0 1027.0 COG3119@1|root,COG3119@2|Bacteria,4NGX1@976|Bacteroidetes,2FMSX@200643|Bacteroidia,22WIH@171551|Porphyromonadaceae 976|Bacteroidetes P Type I phosphodiesterase / nucleotide pyrophosphatase aslA - - - - - - - - - - - Sulfatase BECNEDJF_01812 411477.PARMER_01487 0.0 1197.0 COG3250@1|root,COG3250@2|Bacteria,4NEDF@976|Bacteroidetes,2FMTQ@200643|Bacteroidia,22WYP@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_01813 411477.PARMER_02854 1.52e-142 403.0 COG0776@1|root,COG0776@2|Bacteria,4P6DN@976|Bacteroidetes,2FRK1@200643|Bacteroidia 976|Bacteroidetes L DNA-binding protein - - - - - - - - - - - - Bac_DNA_binding BECNEDJF_01814 411477.PARMER_02851 0.0 981.0 COG0606@1|root,COG0606@2|Bacteria,4NE0G@976|Bacteroidetes,2FMHE@200643|Bacteroidia,22W0Y@171551|Porphyromonadaceae 976|Bacteroidetes O magnesium chelatase comM - - ko:K07391 - - - - ko00000 - - - ChlI,Mg_chelatase,Mg_chelatase_C BECNEDJF_01815 411477.PARMER_02850 8.89e-269 736.0 COG0526@1|root,COG0526@2|Bacteria,4NRAI@976|Bacteroidetes,2FSX6@200643|Bacteroidia,22YDF@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 BECNEDJF_01816 411477.PARMER_02849 0.0 1083.0 COG1866@1|root,COG1866@2|Bacteria,4NEGI@976|Bacteroidetes,2FNYK@200643|Bacteroidia,22VYR@171551|Porphyromonadaceae 976|Bacteroidetes H Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA pckA GO:0003674,GO:0003824,GO:0004611,GO:0004612,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006006,GO:0006094,GO:0008150,GO:0008152,GO:0009058,GO:0016051,GO:0016829,GO:0016830,GO:0016831,GO:0019318,GO:0019319,GO:0044238,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046364,GO:0071704,GO:1901576 4.1.1.49 ko:K01610 ko00010,ko00020,ko00620,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00170 R00341 RC00002,RC02741 ko00000,ko00001,ko00002,ko01000 - - - PEPCK_ATP BECNEDJF_01817 999419.HMPREF1077_01449 3.98e-18 79.7 COG2361@1|root,COG2361@2|Bacteria,4NZQ7@976|Bacteroidetes,2FV50@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function DUF86 - - - - - - - - - - - - DUF86 BECNEDJF_01818 411477.PARMER_02846 4.31e-76 227.0 COG1669@1|root,COG1669@2|Bacteria,4NXGR@976|Bacteroidetes,2FV7W@200643|Bacteroidia,230WQ@171551|Porphyromonadaceae 976|Bacteroidetes S Nucleotidyltransferase domain - - - ko:K07075 - - - - ko00000 - - - NTP_transf_2 BECNEDJF_01819 411477.PARMER_02845 3.38e-252 691.0 COG1013@1|root,COG1013@2|Bacteria,4NIE0@976|Bacteroidetes,2FME7@200643|Bacteroidia,22VVU@171551|Porphyromonadaceae 976|Bacteroidetes C ferredoxin oxidoreductase subunit beta oorB - 1.2.7.11,1.2.7.3 ko:K00175 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C BECNEDJF_01820 411477.PARMER_02844 0.0 1212.0 COG0674@1|root,COG1014@1|root,COG0674@2|Bacteria,COG1014@2|Bacteria,4NEP3@976|Bacteroidetes,2FN08@200643|Bacteroidia,22WBU@171551|Porphyromonadaceae 976|Bacteroidetes C 2-oxoacid acceptor oxidoreductase, alpha subunit porA - 1.2.7.11,1.2.7.3 ko:K00174 ko00010,ko00020,ko00620,ko00650,ko00720,ko01100,ko01120,ko01130,ko01200,map00010,map00020,map00620,map00650,map00720,map01100,map01120,map01130,map01200 M00009,M00011,M00173,M00620 R01196,R01197 RC00004,RC02742,RC02833 br01601,ko00000,ko00001,ko00002,ko01000 - - - PFOR_II,POR,POR_N BECNEDJF_01821 411477.PARMER_02843 3.32e-283 774.0 COG0686@1|root,COG0686@2|Bacteria,4NE8F@976|Bacteroidetes,2FP71@200643|Bacteroidia,22XBI@171551|Porphyromonadaceae 976|Bacteroidetes E Alanine dehydrogenase/PNT, N-terminal domain ald - 1.4.1.1 ko:K00259 ko00250,ko00430,ko01100,map00250,map00430,map01100 - R00396 RC00008 ko00000,ko00001,ko01000 - - - AlaDh_PNT_C,AlaDh_PNT_N BECNEDJF_01822 411477.PARMER_02842 6.15e-116 332.0 COG0703@1|root,COG0703@2|Bacteria,4NQ73@976|Bacteroidetes,2FM3K@200643|Bacteroidia,22Y40@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate aroK GO:0000287,GO:0003674,GO:0003824,GO:0004765,GO:0005488,GO:0006082,GO:0006520,GO:0006725,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0019438,GO:0019632,GO:0019752,GO:0032787,GO:0043167,GO:0043169,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046872,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901615 2.7.1.71 ko:K00891 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R02412 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - SKI BECNEDJF_01823 411477.PARMER_02840 2.25e-157 440.0 COG0328@1|root,COG3341@1|root,COG0328@2|Bacteria,COG3341@2|Bacteria,4NI01@976|Bacteroidetes,2FMEU@200643|Bacteroidia,22XM6@171551|Porphyromonadaceae 976|Bacteroidetes L Ribonuclease H rnhA - 3.1.26.4 ko:K03469 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - Cauli_VI,RNase_H BECNEDJF_01824 411477.PARMER_02839 0.0 867.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMXE@200643|Bacteroidia,22W6E@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.136 ko:K02474,ko:K13015 ko00520,map00520 - R00421,R06894 RC00291 ko00000,ko00001,ko01000,ko01005 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N BECNEDJF_01825 411477.PARMER_02838 5.71e-175 486.0 COG3774@1|root,COG3774@2|Bacteria,4NSMR@976|Bacteroidetes,2FR41@200643|Bacteroidia,231F2@171551|Porphyromonadaceae 976|Bacteroidetes M Capsular polysaccharide synthesis protein - - - - - - - - - - - - Gly_transf_sug BECNEDJF_01826 411477.PARMER_02836 1.07e-191 531.0 28JAC@1|root,2Z956@2|Bacteria,4NPKM@976|Bacteroidetes,2FSIK@200643|Bacteroidia,22XWZ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01827 411477.PARMER_02835 3.71e-187 519.0 COG1216@1|root,COG1216@2|Bacteria,4NRTB@976|Bacteroidetes 976|Bacteroidetes S Glycosyl transferase, family 2 - - - - - - - - - - - - - BECNEDJF_01828 411477.PARMER_02834 6.11e-229 629.0 COG0515@1|root,COG0515@2|Bacteria,4PMF4@976|Bacteroidetes,2G0DX@200643|Bacteroidia,23244@171551|Porphyromonadaceae 976|Bacteroidetes KLT Lipopolysaccharide kinase (Kdo/WaaP) family - - - - - - - - - - - - Glycos_transf_2,Kdo BECNEDJF_01829 411477.PARMER_02833 2.02e-245 674.0 COG0438@1|root,COG0438@2|Bacteria,4NF89@976|Bacteroidetes,2FMFR@200643|Bacteroidia,22XFI@171551|Porphyromonadaceae 976|Bacteroidetes M transferase activity, transferring glycosyl groups - - - - - - - - - - - - - BECNEDJF_01830 411477.PARMER_02832 6.03e-248 680.0 COG0859@1|root,COG0859@2|Bacteria,4NEPH@976|Bacteroidetes,2FMP7@200643|Bacteroidia,22XC7@171551|Porphyromonadaceae 976|Bacteroidetes M glycosyl transferase family - - - ko:K02843 ko00540,ko01100,map00540,map01100 M00080 - - ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT9 - Glyco_transf_9 BECNEDJF_01831 411477.PARMER_02831 5.54e-144 405.0 COG0463@1|root,COG0463@2|Bacteria,4NGJK@976|Bacteroidetes,2FM49@200643|Bacteroidia,22X83@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF4254) - - - - - - - - - - - - DUF4254 BECNEDJF_01832 411477.PARMER_02830 2.3e-158 444.0 COG0745@1|root,COG0745@2|Bacteria,4NKVJ@976|Bacteroidetes,2FNYS@200643|Bacteroidia,22XHK@171551|Porphyromonadaceae 976|Bacteroidetes KT Transcriptional regulatory protein, C terminal - - - - - - - - - - - - Response_reg,Trans_reg_C BECNEDJF_01833 411477.PARMER_02829 0.0 877.0 COG0642@1|root,COG2205@2|Bacteria,4NJKX@976|Bacteroidetes,2FPF2@200643|Bacteroidia,22WU9@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c BECNEDJF_01834 411477.PARMER_02827 3.42e-85 277.0 COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia,22WE2@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - F5_F8_type_C,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_01835 999419.HMPREF1077_01655 0.0 1173.0 COG2972@1|root,COG2972@2|Bacteria,4NFZB@976|Bacteroidetes,2G2V9@200643|Bacteroidia,22ZVP@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - His_kinase,Reg_prop,Y_Y_Y BECNEDJF_01836 411477.PARMER_03617 5.84e-173 483.0 COG3279@1|root,COG3279@2|Bacteria,4NNHE@976|Bacteroidetes,2FUZW@200643|Bacteroidia,22ZYW@171551|Porphyromonadaceae 976|Bacteroidetes T LytTr DNA-binding domain - - - ko:K02477 - - - - ko00000,ko02022 - - - LytTR,Response_reg BECNEDJF_01837 411477.PARMER_03618 2.92e-98 285.0 2BFTD@1|root,329NB@2|Bacteria,4PHNK@976|Bacteroidetes,2FSP7@200643|Bacteroidia,2317Q@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01838 411477.PARMER_03619 2.17e-130 371.0 2DV38@1|root,33TU9@2|Bacteria,4P2PK@976|Bacteroidetes,2FRAD@200643|Bacteroidia,230QG@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - OMP_b-brl BECNEDJF_01839 411477.PARMER_02296 3.43e-106 308.0 COG0228@1|root,COG0228@2|Bacteria,4NNY8@976|Bacteroidetes,2FN6N@200643|Bacteroidia,22XNN@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bS16 family rpsP GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02959 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S16 BECNEDJF_01840 411477.PARMER_02297 4.83e-228 627.0 COG3507@1|root,COG3507@2|Bacteria,4NGKH@976|Bacteroidetes,2FP3Q@200643|Bacteroidia,2307H@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 43 family abnA - - - - - - - - - - - Glyco_hydro_43 BECNEDJF_01841 411477.PARMER_02301 0.0 1045.0 COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,2FMY5@200643|Bacteroidia,22W6R@171551|Porphyromonadaceae 976|Bacteroidetes S glycosyl transferase family 2 - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_Xtn BECNEDJF_01842 411477.PARMER_02302 3.87e-82 255.0 COG3047@1|root,COG3047@2|Bacteria,4PMUX@976|Bacteroidetes,2G0HA@200643|Bacteroidia,23242@171551|Porphyromonadaceae 976|Bacteroidetes M Domain of unknown function (DUF3943) - - - - - - - - - - - - DUF3943 BECNEDJF_01843 411477.PARMER_03591 0.0 1501.0 COG1674@1|root,COG1674@2|Bacteria,4NE86@976|Bacteroidetes,2FMX0@200643|Bacteroidia,22WU0@171551|Porphyromonadaceae 976|Bacteroidetes D cell division protein FtsK ftsK - - ko:K03466 - - - - ko00000,ko03036 3.A.12 - - FtsK_4TM,FtsK_SpoIIIE,Ftsk_gamma BECNEDJF_01844 411477.PARMER_03592 1.76e-155 436.0 COG2834@1|root,COG2834@2|Bacteria,4NFGN@976|Bacteroidetes,2FQ63@200643|Bacteroidia,22YN1@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane lipoprotein carrier protein LolA lolA - - ko:K03634 - - - - ko00000 - - - LolA,LolA_2 BECNEDJF_01846 411477.PARMER_00763 3.41e-65 198.0 COG2919@1|root,COG2919@2|Bacteria,4NURQ@976|Bacteroidetes,2FTC0@200643|Bacteroidia,22YWW@171551|Porphyromonadaceae 976|Bacteroidetes D Septum formation initiator - - - - - - - - - - - - DivIC BECNEDJF_01847 411477.PARMER_00762 3.98e-70 211.0 2EAHC@1|root,334KJ@2|Bacteria,4NWVD@976|Bacteroidetes,2FUJ8@200643|Bacteroidia,22YTX@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - BECNEDJF_01848 411477.PARMER_00761 0.0 1562.0 COG4206@1|root,COG4206@2|Bacteria,4NE1W@976|Bacteroidetes,2FME0@200643|Bacteroidia,22XAS@171551|Porphyromonadaceae 976|Bacteroidetes H TonB-dependent Receptor Plug Domain - - - - - - - - - - - - CarbopepD_reg_2,OMP_b-brl_3,Plug,TonB_dep_Rec BECNEDJF_01849 411477.PARMER_00760 0.0 948.0 COG4166@1|root,COG4166@2|Bacteria,4NJ4K@976|Bacteroidetes,2G060@200643|Bacteroidia,22ZN6@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of unknown function (DUF4374) - - - - - - - - - - - - DUF4374 BECNEDJF_01850 411477.PARMER_00759 2.32e-196 544.0 COG2819@1|root,COG2819@2|Bacteria,4NN8M@976|Bacteroidetes,2FPCR@200643|Bacteroidia,2316N@171551|Porphyromonadaceae 976|Bacteroidetes S Putative esterase - - - ko:K07017 - - - - ko00000 - - - Esterase BECNEDJF_01851 411477.PARMER_00758 5.59e-272 744.0 COG3182@1|root,COG3182@2|Bacteria,4NEXX@976|Bacteroidetes,2FPEY@200643|Bacteroidia,22WIV@171551|Porphyromonadaceae 976|Bacteroidetes S PepSY-associated TM region piuB - - - - - - - - - - - PepSY,PepSY_TM BECNEDJF_01852 411477.PARMER_00757 2.71e-130 371.0 COG2825@1|root,COG2825@2|Bacteria,4NQGG@976|Bacteroidetes,2FPTR@200643|Bacteroidia,22Y4J@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein (OmpH-like) - - - ko:K06142 - - - - ko00000 - - - OmpH BECNEDJF_01853 411477.PARMER_00755 0.0 975.0 COG2195@1|root,COG2195@2|Bacteria,4NG8I@976|Bacteroidetes,2FNVV@200643|Bacteroidia,22VWR@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the hydrolysis of Xaa-His dipeptides - - - ko:K01270 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - M20_dimer,Peptidase_M20 BECNEDJF_01854 411477.PARMER_00754 0.0 989.0 2DB82@1|root,2Z7PX@2|Bacteria,4NEW5@976|Bacteroidetes,2FMDV@200643|Bacteroidia,22W0B@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Beta_helix BECNEDJF_01855 411477.PARMER_00753 7.58e-270 737.0 COG2374@1|root,COG2374@2|Bacteria,4NEHG@976|Bacteroidetes,2FNH4@200643|Bacteroidia,22WK4@171551|Porphyromonadaceae 976|Bacteroidetes S endonuclease - - - - - - - - - - - - Exo_endo_phos BECNEDJF_01856 411477.PARMER_00752 0.0 1132.0 COG0739@1|root,COG0739@2|Bacteria,4NED7@976|Bacteroidetes,2FP3N@200643|Bacteroidia,22XF3@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family M23 - - - - - - - - - - - - Peptidase_M23 BECNEDJF_01857 411477.PARMER_00751 0.0 1129.0 COG1109@1|root,COG1109@2|Bacteria,4NFU7@976|Bacteroidetes,2FM0A@200643|Bacteroidia,22WB1@171551|Porphyromonadaceae 976|Bacteroidetes G Phosphoglucomutase pgcA - 5.4.2.2 ko:K01835 ko00010,ko00030,ko00052,ko00230,ko00500,ko00520,ko00521,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00052,map00230,map00500,map00520,map00521,map01100,map01110,map01120,map01130 M00549 R00959,R01057,R08639 RC00408 ko00000,ko00001,ko00002,ko01000 - - - PGM_PMM_I,PGM_PMM_II,PGM_PMM_III,PGM_PMM_IV BECNEDJF_01858 411477.PARMER_00750 2.71e-105 306.0 COG0295@1|root,COG0295@2|Bacteria,4NQED@976|Bacteroidetes,2FTBD@200643|Bacteroidia,22Y69@171551|Porphyromonadaceae 976|Bacteroidetes F This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis cdd - 3.5.4.5 ko:K01489 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R01878,R02485,R08221 RC00074,RC00514 ko00000,ko00001,ko01000 - - - dCMP_cyt_deam_1 BECNEDJF_01859 411477.PARMER_00748 3.84e-217 599.0 COG1388@1|root,COG1705@1|root,COG1388@2|Bacteria,COG1705@2|Bacteria,4NEER@976|Bacteroidetes,2FM02@200643|Bacteroidia,22W5G@171551|Porphyromonadaceae 976|Bacteroidetes MNU N-acetylmuramoyl-L-alanine amidase lytG - - - - - - - - - - - Glucosaminidase,LysM BECNEDJF_01860 411477.PARMER_00747 1.53e-288 787.0 COG0150@1|root,COG0150@2|Bacteria,4NE4E@976|Bacteroidetes,2FM0G@200643|Bacteroidia,22VWI@171551|Porphyromonadaceae 976|Bacteroidetes F Phosphoribosylformylglycinamidine cyclo-ligase purM - 6.3.3.1 ko:K01933 ko00230,ko01100,ko01110,ko01130,map00230,map01100,map01110,map01130 M00048 R04208 RC01100 ko00000,ko00001,ko00002,ko01000 - - - AIRS,AIRS_C BECNEDJF_01861 999419.HMPREF1077_00577 1.41e-264 725.0 COG0216@1|root,COG0216@2|Bacteria,4NF72@976|Bacteroidetes,2FNKW@200643|Bacteroidia,22VUT@171551|Porphyromonadaceae 976|Bacteroidetes J Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA prfA - - ko:K02835 - - - - ko00000,ko03012 - - - PCRF,RF-1 BECNEDJF_01862 411477.PARMER_00745 4.18e-201 556.0 COG0284@1|root,COG0284@2|Bacteria,4NE12@976|Bacteroidetes,2FPJM@200643|Bacteroidia,22W6B@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the OMP decarboxylase family. Type 2 subfamily pyrF GO:0003674,GO:0003824,GO:0004590,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016829,GO:0016830,GO:0016831,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046112,GO:0046483,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.1.23 ko:K01591 ko00240,ko01100,map00240,map01100 M00051 R00965 RC00409 ko00000,ko00001,ko00002,ko01000 - - - OMPdecase BECNEDJF_01863 999419.HMPREF1077_01976 2.74e-187 536.0 COG1554@1|root,COG1554@2|Bacteria,4NFYU@976|Bacteroidetes,2FPE9@200643|Bacteroidia,22ZAF@171551|Porphyromonadaceae 976|Bacteroidetes G COG NOG26513 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_01864 411477.PARMER_00385 0.0 1362.0 COG4948@1|root,COG4948@2|Bacteria,4PKP3@976|Bacteroidetes,2FMI4@200643|Bacteroidia,22W6G@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl-hydrolase 97 C-terminal, oligomerisation - - 3.2.1.20 ko:K01187 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - GH97_C,GH97_N,Glyco_hydro_97 BECNEDJF_01865 411477.PARMER_00384 9.06e-190 527.0 COG1237@1|root,COG1237@2|Bacteria,4NPT5@976|Bacteroidetes,2FNG8@200643|Bacteroidia,230V9@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily - - 2.5.1.105 ko:K06897 ko00790,map00790 - R10339 RC00121 ko00000,ko00001,ko01000 - - - Lactamase_B BECNEDJF_01866 411477.PARMER_03379 4.81e-224 622.0 COG2262@1|root,COG2262@2|Bacteria,4NF0P@976|Bacteroidetes,2FM9T@200643|Bacteroidia,22W7M@171551|Porphyromonadaceae 976|Bacteroidetes S GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis hflX - - ko:K03665 - - - - ko00000,ko03009 - - - GTP-bdg_M,GTP-bdg_N,MMR_HSR1 BECNEDJF_01867 411477.PARMER_03378 0.0 1317.0 COG0448@1|root,COG0448@2|Bacteria,4PKFG@976|Bacteroidetes,2G3FA@200643|Bacteroidia,22VWS@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4954) - - - - - - - - - - - - DUF4954 BECNEDJF_01868 411477.PARMER_03377 1.42e-214 592.0 COG4974@1|root,COG4974@2|Bacteria,4NE0E@976|Bacteroidetes,2FP3B@200643|Bacteroidia,22WQE@171551|Porphyromonadaceae 976|Bacteroidetes D Belongs to the 'phage' integrase family. XerC subfamily xerC - - ko:K04763 - - - - ko00000,ko03036 - - - Phage_int_SAM_1,Phage_integrase BECNEDJF_01869 999419.HMPREF1077_01533 0.0 1134.0 COG4225@1|root,COG4225@2|Bacteria,4NHN6@976|Bacteroidetes,2G2QI@200643|Bacteroidia 976|Bacteroidetes S Heparinase II/III-like protein - - - - - - - - - - - - Hepar_II_III BECNEDJF_01870 999419.HMPREF1077_01532 9.86e-304 827.0 COG1331@1|root,COG1331@2|Bacteria,4PKHP@976|Bacteroidetes,2G06V@200643|Bacteroidia,22X55@171551|Porphyromonadaceae 976|Bacteroidetes O Glycosyl Hydrolase Family 88 - - - - - - - - - - - - Glyco_hydro_88 BECNEDJF_01871 411477.PARMER_02766 9.06e-114 328.0 COG0394@1|root,COG0394@2|Bacteria,4NNN6@976|Bacteroidetes,2FSB5@200643|Bacteroidia,22Y30@171551|Porphyromonadaceae 976|Bacteroidetes T Low molecular weight phosphatase family arsC - 1.20.4.1 ko:K03741 - - - - ko00000,ko01000 - - - LMWPc BECNEDJF_01872 411477.PARMER_02952 1.04e-161 469.0 COG0457@1|root,COG0823@1|root,COG2885@1|root,COG0457@2|Bacteria,COG0823@2|Bacteria,COG2885@2|Bacteria,4NE6G@976|Bacteroidetes,2FPQX@200643|Bacteroidia,22WF4@171551|Porphyromonadaceae 976|Bacteroidetes MU Belongs to the ompA family - - - ko:K03640 - - - - ko00000,ko02000 2.C.1.2 - - CarboxypepD_reg,OmpA,PD40 BECNEDJF_01873 411477.PARMER_02953 2.58e-224 617.0 COG0526@1|root,COG0526@2|Bacteria,4NKU0@976|Bacteroidetes,2FPZT@200643|Bacteroidia,22XPB@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF5106) - - - - - - - - - - - - AhpC-TSA,DUF5106,Thioredoxin_8 BECNEDJF_01874 411477.PARMER_02954 9.38e-173 483.0 COG0501@1|root,COG0501@2|Bacteria,4NHYD@976|Bacteroidetes,2FPZ9@200643|Bacteroidia,22WAG@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase family M48 loiP - - ko:K07387 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M48 BECNEDJF_01875 411477.PARMER_02955 1.63e-140 397.0 COG1259@1|root,COG1259@2|Bacteria,4NGSW@976|Bacteroidetes,2FTKZ@200643|Bacteroidia,22XUY@171551|Porphyromonadaceae 976|Bacteroidetes S Bifunctional nuclease - - - ko:K08999 - - - - ko00000 - - - DNase-RNase,UVR BECNEDJF_01876 411477.PARMER_02956 3.22e-304 831.0 COG1972@1|root,COG1972@2|Bacteria,4NEYN@976|Bacteroidetes,2FNQH@200643|Bacteroidia,22W9V@171551|Porphyromonadaceae 976|Bacteroidetes F Na+ dependent nucleoside transporter C-terminus nupC - - ko:K03317 - - - - ko00000 2.A.41 - - Gate,Nucleos_tra2_C,Nucleos_tra2_N BECNEDJF_01877 411477.PARMER_02957 2.4e-167 467.0 COG1385@1|root,COG1385@2|Bacteria,4NE2S@976|Bacteroidetes,2FKZG@200643|Bacteroidia,22WYD@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit rsmE - 2.1.1.193 ko:K09761 - - - - ko00000,ko01000,ko03009 - - - Methyltrans_RNA BECNEDJF_01878 411477.PARMER_02958 2.18e-120 345.0 COG0110@1|root,COG0110@2|Bacteria,4NNWE@976|Bacteroidetes,2G32A@200643|Bacteroidia,231ZM@171551|Porphyromonadaceae 976|Bacteroidetes S Maltose acetyltransferase maa - 2.3.1.79 ko:K00661 - - - - ko00000,ko01000 - - - Hexapep,Hexapep_2,Mac BECNEDJF_01879 411477.PARMER_02959 9.56e-317 862.0 COG0519@1|root,COG0519@2|Bacteria,4NZSX@976|Bacteroidetes,2FNJE@200643|Bacteroidia,22ZKW@171551|Porphyromonadaceae 976|Bacteroidetes F GMP synthase C terminal domain - GO:0003674,GO:0003824,GO:0003921,GO:0003922,GO:0006139,GO:0006163,GO:0006164,GO:0006177,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0016884,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034404,GO:0034641,GO:0034654,GO:0042278,GO:0042451,GO:0042455,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046037,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901068,GO:1901070,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase,GMP_synt_C,NAD_synthase BECNEDJF_01880 411477.PARMER_02960 0.0 1022.0 COG0518@1|root,COG0519@1|root,COG0518@2|Bacteria,COG0519@2|Bacteria,4NESX@976|Bacteroidetes,2FM3V@200643|Bacteroidia,22VWG@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of GMP from XMP guaA - 6.3.5.2 ko:K01951 ko00230,ko00983,ko01100,map00230,map00983,map01100 M00050 R01230,R01231,R08244 RC00010,RC00204 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase,GMP_synt_C,NAD_synthase BECNEDJF_01882 411477.PARMER_02961 2.36e-181 508.0 COG4372@1|root,COG4372@2|Bacteria,4PKE4@976|Bacteroidetes,2FPKQ@200643|Bacteroidia,22W9H@171551|Porphyromonadaceae 976|Bacteroidetes S Transposase - - - - - - - - - - - - - BECNEDJF_01883 411477.PARMER_02962 1.21e-143 405.0 COG0664@1|root,COG0664@2|Bacteria,4NHXN@976|Bacteroidetes,2FYUZ@200643|Bacteroidia,230W6@171551|Porphyromonadaceae 976|Bacteroidetes T Cyclic nucleotide-monophosphate binding domain - - - - - - - - - - - - cNMP_binding BECNEDJF_01884 411477.PARMER_02963 0.0 899.0 COG1538@1|root,COG1538@2|Bacteria,4NF4V@976|Bacteroidetes,2FM0S@200643|Bacteroidia,22WY2@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_01885 411477.PARMER_02964 2.19e-226 625.0 COG0845@1|root,COG0845@2|Bacteria,4NECC@976|Bacteroidetes,2FMDD@200643|Bacteroidia,22WYE@171551|Porphyromonadaceae 976|Bacteroidetes M Hemolysin secretion protein D - - - ko:K01993 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,HlyD_D23 BECNEDJF_01886 999419.HMPREF1077_01163 6.4e-266 730.0 COG1668@1|root,COG1668@2|Bacteria,4NG99@976|Bacteroidetes,2FNNT@200643|Bacteroidia,22WTF@171551|Porphyromonadaceae 976|Bacteroidetes CP membrane - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 BECNEDJF_01887 411477.PARMER_02967 2.29e-293 801.0 COG0842@1|root,COG0842@2|Bacteria,4NGZG@976|Bacteroidetes,2FMX5@200643|Bacteroidia,22W5N@171551|Porphyromonadaceae 976|Bacteroidetes V ABC-2 family transporter protein - - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 BECNEDJF_01888 999419.HMPREF1077_01165 7.94e-218 600.0 COG1082@1|root,COG1082@2|Bacteria,4NJ3Z@976|Bacteroidetes,2FNWR@200643|Bacteroidia,22XN3@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 BECNEDJF_01889 411477.PARMER_02969 2.4e-173 483.0 COG0637@1|root,COG0637@2|Bacteria,4NJS1@976|Bacteroidetes,2FN13@200643|Bacteroidia,22W0C@171551|Porphyromonadaceae 976|Bacteroidetes S HAD hydrolase, family IA, variant 3 yfbT - - - - - - - - - - - HAD_2 BECNEDJF_01890 411477.PARMER_02970 0.0 897.0 COG0166@1|root,COG0166@2|Bacteria,4NDV0@976|Bacteroidetes,2FP20@200643|Bacteroidia,22VVH@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the GPI family pgi - 5.3.1.9 ko:K01810 ko00010,ko00030,ko00500,ko00520,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00500,map00520,map01100,map01110,map01120,map01130,map01200 M00001,M00004,M00114 R02739,R02740,R03321 RC00376,RC00563 ko00000,ko00001,ko00002,ko01000,ko04147 - - - PGI BECNEDJF_01891 411477.PARMER_02971 1.3e-241 663.0 COG0240@1|root,COG0240@2|Bacteria,4NF4R@976|Bacteroidetes,2FND2@200643|Bacteroidia,22WB0@171551|Porphyromonadaceae 976|Bacteroidetes I Glycerol-3-phosphate dehydrogenase gpsA - 1.1.1.94 ko:K00057 ko00564,ko01110,map00564,map01110 - R00842,R00844 RC00029 ko00000,ko00001,ko01000 - - - NAD_Gly3P_dh_C,NAD_Gly3P_dh_N BECNEDJF_01892 411477.PARMER_02972 0.0 1122.0 COG1190@1|root,COG1190@2|Bacteria,4NDZN@976|Bacteroidetes,2FMXC@200643|Bacteroidia,22WSH@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class-II aminoacyl-tRNA synthetase family lysS - 6.1.1.6 ko:K04567 ko00970,map00970 M00359,M00360 R03658 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - DUF4332,tRNA-synt_2,tRNA_anti-codon BECNEDJF_01893 411477.PARMER_03309 1.25e-237 653.0 COG0739@1|root,COG0739@2|Bacteria,4NGHH@976|Bacteroidetes,2FME3@200643|Bacteroidia,22X07@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase, M23 - - - - - - - - - - - - Peptidase_M23 BECNEDJF_01894 411477.PARMER_03310 2.91e-74 223.0 COG0789@1|root,COG0789@2|Bacteria,4NSBD@976|Bacteroidetes,2FTI6@200643|Bacteroidia,22YFS@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator ycgE - - - - - - - - - - - MerR_1 BECNEDJF_01895 411477.PARMER_03311 1.55e-91 267.0 COG0629@1|root,COG0629@2|Bacteria,4NT9M@976|Bacteroidetes,2FS0P@200643|Bacteroidia,22YIZ@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function (DUF3127) - - - - - - - - - - - - DUF3127 BECNEDJF_01896 411477.PARMER_00310 2.17e-36 127.0 2913J@1|root,2ZNQZ@2|Bacteria,4P6UN@976|Bacteroidetes,2FQYD@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01897 411477.PARMER_00309 1.48e-241 665.0 COG2255@1|root,COG2255@2|Bacteria,4NEB9@976|Bacteroidetes,2FNZB@200643|Bacteroidia,22W3Z@171551|Porphyromonadaceae 976|Bacteroidetes L The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing ruvB - 3.6.4.12 ko:K03551 ko03440,map03440 - - - ko00000,ko00001,ko01000,ko03400 - - - RuvB_C,RuvB_N BECNEDJF_01898 411477.PARMER_00308 0.0 971.0 COG2244@1|root,COG2244@2|Bacteria,4NDZ0@976|Bacteroidetes,2FKYU@200643|Bacteroidia,22W09@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein cap - - - - - - - - - - - Polysacc_synt,Polysacc_synt_3,Polysacc_synt_C BECNEDJF_01899 411477.PARMER_00307 3.75e-162 474.0 COG0642@1|root,COG2205@2|Bacteria,4NJCH@976|Bacteroidetes,2FMSB@200643|Bacteroidia,22ZEQ@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA BECNEDJF_01900 411477.PARMER_01514 6.74e-213 588.0 COG3643@1|root,COG3643@2|Bacteria,4NFE3@976|Bacteroidetes,2FMWT@200643|Bacteroidia,22WZC@171551|Porphyromonadaceae 976|Bacteroidetes E Glutamate formiminotransferase ftcD - 2.1.2.5,4.3.1.4 ko:K00603,ko:K13990 ko00340,ko00670,ko01100,map00340,map00670,map01100 - R02287,R02302,R03189 RC00165,RC00221,RC00223,RC00688,RC00870 ko00000,ko00001,ko01000,ko03036,ko04147 - - - FTCD,FTCD_C,FTCD_N BECNEDJF_01901 411477.PARMER_01513 6.15e-299 815.0 COG1228@1|root,COG1228@2|Bacteria,4NE6C@976|Bacteroidetes,2FNW2@200643|Bacteroidia,22W99@171551|Porphyromonadaceae 976|Bacteroidetes Q Imidazolone-5-propionate hydrolase hutI - 3.5.2.7 ko:K01468 ko00340,ko01100,map00340,map01100 M00045 R02288 RC00683 ko00000,ko00001,ko00002,ko01000 - - - Amidohydro_1,Amidohydro_3 BECNEDJF_01902 411477.PARMER_01512 2.77e-133 379.0 COG3404@1|root,COG3404@2|Bacteria,4NN2J@976|Bacteroidetes,2FPSN@200643|Bacteroidia,22XZX@171551|Porphyromonadaceae 976|Bacteroidetes E Methenyltetrahydrofolate cyclohydrolase fchA - - - - - - - - - - - FTCD_C,Peptidase_M78 BECNEDJF_01903 411477.PARMER_03826 1.4e-181 511.0 COG1073@1|root,COG1073@2|Bacteria,4NG6A@976|Bacteroidetes,2FPAE@200643|Bacteroidia,22YCE@171551|Porphyromonadaceae 976|Bacteroidetes S alpha beta - - - - - - - - - - - - - BECNEDJF_01904 411477.PARMER_03825 1.35e-73 221.0 COG0335@1|root,COG0335@2|Bacteria,4NNPW@976|Bacteroidetes,2FSHU@200643|Bacteroidia,22Y1V@171551|Porphyromonadaceae 976|Bacteroidetes J This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site rplS GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02884 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L19 BECNEDJF_01905 411477.PARMER_03824 0.0 1008.0 COG3172@1|root,COG3172@2|Bacteria,4NEQF@976|Bacteroidetes,2FN8P@200643|Bacteroidia,22WZJ@171551|Porphyromonadaceae 976|Bacteroidetes H NAD metabolism ATPase kinase - - - - - - - - - - - - DUF4301 BECNEDJF_01906 411477.PARMER_03823 0.0 1429.0 COG0317@1|root,COG0317@2|Bacteria,4NESY@976|Bacteroidetes,2FKYN@200643|Bacteroidia,22WCI@171551|Porphyromonadaceae 976|Bacteroidetes KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance relA - 2.7.6.5,3.1.7.2 ko:K00951,ko:K01139 ko00230,map00230 - R00336,R00429 RC00002,RC00078 ko00000,ko00001,ko01000,ko03009 - - - ACT_4,HD_4,RelA_SpoT,TGS BECNEDJF_01907 411477.PARMER_03822 1.03e-201 558.0 COG2207@1|root,COG2207@2|Bacteria,4NGWC@976|Bacteroidetes,2FNH8@200643|Bacteroidia,22XKU@171551|Porphyromonadaceae 976|Bacteroidetes K AraC family transcriptional regulator - - - - - - - - - - - - AraC_binding,HTH_18 BECNEDJF_01908 411477.PARMER_03821 1.48e-141 399.0 COG0110@1|root,COG0110@2|Bacteria,4NH27@976|Bacteroidetes,2FQA3@200643|Bacteroidia,22XJT@171551|Porphyromonadaceae 976|Bacteroidetes S Hexapeptide repeat of succinyl-transferase - - 2.3.1.79 ko:K00661 - - - - ko00000,ko01000 - - - Hexapep,Hexapep_2 BECNEDJF_01909 411477.PARMER_03818 3.8e-105 303.0 2DWV0@1|root,3420H@2|Bacteria,4P4G9@976|Bacteroidetes,2FT1Z@200643|Bacteroidia 976|Bacteroidetes S COG NOG19145 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_01910 411477.PARMER_03817 0.0 939.0 COG0617@1|root,COG0617@2|Bacteria,4NF1S@976|Bacteroidetes,2FNMZ@200643|Bacteroidia,22X29@171551|Porphyromonadaceae 976|Bacteroidetes J tRNA nucleotidyltransferase cca - 2.7.7.19,2.7.7.72 ko:K00970,ko:K00974 ko03013,ko03018,map03013,map03018 - R09382,R09383,R09384,R09386 RC00078 ko00000,ko00001,ko01000,ko03016,ko03019 - - - HD,PolyA_pol,PolyA_pol_RNAbd BECNEDJF_01911 411477.PARMER_03816 6.12e-192 533.0 2BUJT@1|root,32PW9@2|Bacteria,4NS5Q@976|Bacteroidetes,2FMA2@200643|Bacteroidia,22Y8M@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01913 411477.PARMER_03813 3.01e-189 526.0 COG0668@1|root,COG0668@2|Bacteria,4NEPW@976|Bacteroidetes,2G3EE@200643|Bacteroidia,22XH6@171551|Porphyromonadaceae 976|Bacteroidetes M mechanosensitive ion channel - - - ko:K03442 - - - - ko00000,ko02000 1.A.23.2 - - MS_channel,TM_helix BECNEDJF_01915 411477.PARMER_03812 4.17e-113 333.0 COG0457@1|root,COG0457@2|Bacteria,4NPDH@976|Bacteroidetes,2FMNE@200643|Bacteroidia,22Y5K@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_2,TPR_6,TPR_7,TPR_8 BECNEDJF_01916 411477.PARMER_03811 5.06e-261 714.0 COG0473@1|root,COG0473@2|Bacteria,4NEBE@976|Bacteroidetes,2FNJ0@200643|Bacteroidia,22WT3@171551|Porphyromonadaceae 976|Bacteroidetes C Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate leuB GO:0003674,GO:0003824,GO:0003862,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006551,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009098,GO:0009987,GO:0016053,GO:0016491,GO:0016614,GO:0016616,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0055114,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 1.1.1.85 ko:K00052 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R00994,R04426,R10052 RC00084,RC00417,RC03036 br01601,ko00000,ko00001,ko00002,ko01000 - - - Iso_dh BECNEDJF_01917 411477.PARMER_03810 6.21e-105 303.0 COG1803@1|root,COG1803@2|Bacteria,4NQJ9@976|Bacteroidetes,2FPT5@200643|Bacteroidia,22XP7@171551|Porphyromonadaceae 976|Bacteroidetes G methylglyoxal synthase mgsA - 4.2.3.3 ko:K01734 ko00640,ko01120,map00640,map01120 - R01016 RC00424 ko00000,ko00001,ko01000 - - - MGS BECNEDJF_01918 411477.PARMER_03809 0.0 991.0 COG0119@1|root,COG0119@2|Bacteria,4NF3N@976|Bacteroidetes,2FKYJ@200643|Bacteroidia,22WYH@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the alpha-IPM synthase homocitrate synthase family leuA_1 - 2.3.1.182 ko:K09011 ko00290,ko00660,ko01100,ko01210,ko01230,map00290,map00660,map01100,map01210,map01230 M00535 R07399 RC00004,RC01205 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like,LeuA_dimer BECNEDJF_01919 411477.PARMER_03808 4.58e-140 395.0 COG0066@1|root,COG0066@2|Bacteria,4NDVY@976|Bacteroidetes,2FNIN@200643|Bacteroidia,22W31@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate leuD - 4.2.1.33,4.2.1.35 ko:K01704 ko00290,ko00660,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R10170 RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase_C BECNEDJF_01920 411477.PARMER_03807 0.0 942.0 COG0065@1|root,COG0065@2|Bacteria,4NG7E@976|Bacteroidetes,2FMCX@200643|Bacteroidia,22WNV@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate leuC - 4.2.1.33,4.2.1.35 ko:K01703 ko00290,ko00660,ko00966,ko01100,ko01110,ko01210,ko01230,map00290,map00660,map00966,map01100,map01110,map01210,map01230 M00432,M00535 R03896,R03898,R03968,R04001,R08620,R08624,R08628,R08634,R08641,R08645,R10170 RC00497,RC00976,RC00977,RC01041,RC01046,RC03072 br01601,ko00000,ko00001,ko00002,ko01000 - - - Aconitase BECNEDJF_01921 411477.PARMER_03806 0.0 968.0 COG0119@1|root,COG0119@2|Bacteria,4NEIT@976|Bacteroidetes,2FNX8@200643|Bacteroidia,22W7V@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate) leuA - 2.3.3.13 ko:K01649 ko00290,ko00620,ko01100,ko01110,ko01210,ko01230,map00290,map00620,map01100,map01110,map01210,map01230 M00432 R01213 RC00004,RC00470,RC02754 br01601,ko00000,ko00001,ko00002,ko01000 - - - HMGL-like,LeuA_dimer BECNEDJF_01922 411477.PARMER_02303 4.19e-140 396.0 COG2860@1|root,COG2860@2|Bacteria,4NEXS@976|Bacteroidetes,2FMPZ@200643|Bacteroidia,22W41@171551|Porphyromonadaceae 976|Bacteroidetes S membrane yadS - - - - - - - - - - - UPF0126 BECNEDJF_01923 411477.PARMER_02304 1.2e-261 716.0 COG0252@1|root,COG0252@2|Bacteria,4NE2Z@976|Bacteroidetes,2FM3E@200643|Bacteroidia,22VV2@171551|Porphyromonadaceae 976|Bacteroidetes EJ L-asparaginase, type I ansA - 3.5.1.1 ko:K01424 ko00250,ko00460,ko01100,ko01110,map00250,map00460,map01100,map01110 - R00485 RC00010,RC02798 ko00000,ko00001,ko01000 - - - Asparaginase BECNEDJF_01924 411477.PARMER_02305 8.12e-197 545.0 COG1235@1|root,COG1235@2|Bacteria,4NDVI@976|Bacteroidetes,2FN8Y@200643|Bacteroidia,22WMP@171551|Porphyromonadaceae 976|Bacteroidetes S metallo-beta-lactamase vicX - - - - - - - - - - - Lactamase_B,Lactamase_B_2 BECNEDJF_01927 411477.PARMER_03061 2.4e-193 536.0 COG0005@1|root,COG0005@2|Bacteria,4NE4J@976|Bacteroidetes,2FM1B@200643|Bacteroidia,22X9V@171551|Porphyromonadaceae 976|Bacteroidetes F The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate xapA - 2.4.2.1 ko:K03783 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R01561,R01863,R01969,R02147,R02294,R02295,R02297,R02484,R02557,R02748,R08368,R10244 RC00033,RC00063,RC00122 ko00000,ko00001,ko01000 - - - PNP_UDP_1 BECNEDJF_01928 411477.PARMER_03060 1.6e-307 837.0 COG0402@1|root,COG0402@2|Bacteria,4NHV6@976|Bacteroidetes,2FQSE@200643|Bacteroidia,22XCF@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the deamination of 5-methylthioadenosine and S-adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine mtaD - 3.5.4.28,3.5.4.31 ko:K12960 ko00270,ko01100,map00270,map01100 - R09660 RC00477 ko00000,ko00001,ko01000 - - - Amidohydro_1 BECNEDJF_01929 411477.PARMER_03059 1.83e-208 582.0 COG0513@1|root,COG0513@2|Bacteria,4NE4Z@976|Bacteroidetes,2FNFU@200643|Bacteroidia,22WHN@171551|Porphyromonadaceae 976|Bacteroidetes L DbpA RNA binding domain dbpA - 3.6.4.13 ko:K05591 - - - - ko00000,ko01000,ko03009 - - - DEAD,DbpA,Helicase_C BECNEDJF_01930 411477.PARMER_04083 2.63e-304 829.0 COG4198@1|root,COG4198@2|Bacteria,4NGQH@976|Bacteroidetes,2FN23@200643|Bacteroidia,22VYG@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1015) - - - - - - - - - - - - DUF1015 BECNEDJF_01931 411477.PARMER_04082 2.73e-152 427.0 COG1011@1|root,COG1011@2|Bacteria,4NQT8@976|Bacteroidetes,2FMXN@200643|Bacteroidia,22Y2Q@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase - GO:0003674,GO:0003824,GO:0006766,GO:0006767,GO:0006771,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009231,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0017144,GO:0018130,GO:0034641,GO:0042364,GO:0042578,GO:0042726,GO:0042727,GO:0043726,GO:0044237,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 3.1.3.10,3.1.3.104 ko:K07025,ko:K20866,ko:K21063 ko00010,ko00740,ko01100,ko01110,ko01120,map00010,map00740,map01100,map01110,map01120 M00125 R00947,R07280 RC00017,RC00078 ko00000,ko00001,ko00002,ko01000 - - - HAD_2,Hydrolase BECNEDJF_01932 999419.HMPREF1077_00960 3.65e-251 689.0 COG1087@1|root,COG1087@2|Bacteria,4NEM9@976|Bacteroidetes,2FMV2@200643|Bacteroidia,22X6S@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the NAD(P)-dependent epimerase dehydratase family galE - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase,GDP_Man_Dehyd BECNEDJF_01933 411477.PARMER_03902 5.11e-285 778.0 COG0156@1|root,COG0156@2|Bacteria,4NFBU@976|Bacteroidetes,2FM0N@200643|Bacteroidia,22W8W@171551|Porphyromonadaceae 976|Bacteroidetes E 2-amino-3-ketobutyrate CoA ligase bioF - 2.3.1.29,2.3.1.47 ko:K00639,ko:K00652 ko00260,ko00780,ko01100,map00260,map00780,map01100 M00123,M00573,M00577 R00371,R03210,R10124 RC00004,RC00039,RC00394,RC02725 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_01934 411477.PARMER_03901 1.02e-234 645.0 COG1597@1|root,COG1597@2|Bacteria,4NJWB@976|Bacteroidetes,2FMGJ@200643|Bacteroidia,22WEB@171551|Porphyromonadaceae 976|Bacteroidetes I Lipid kinase - - - - - - - - - - - - DAGK_cat BECNEDJF_01935 411477.PARMER_03900 2.21e-95 281.0 COG4123@1|root,COG4123@2|Bacteria,4NG1X@976|Bacteroidetes,2FMHH@200643|Bacteroidia,22Y0T@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC) smtA GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008175,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016426,GO:0016430,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.1.1.223 ko:K15460 - - - - ko00000,ko01000,ko03016 - - - MTS BECNEDJF_01936 1168034.FH5T_16110 1.04e-102 313.0 COG4974@1|root,COG4974@2|Bacteria,4NFAD@976|Bacteroidetes,2FMYI@200643|Bacteroidia 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Phage_int_SAM_1,Phage_integrase BECNEDJF_01937 1121904.ARBP01000035_gene1741 3.34e-112 343.0 COG0582@1|root,COG0582@2|Bacteria,4P1HK@976|Bacteroidetes 976|Bacteroidetes L Phage integrase family - - - - - - - - - - - - Phage_integrase BECNEDJF_01938 1122971.BAME01000176_gene6696 4.5e-79 253.0 COG0582@1|root,COG0582@2|Bacteria,4PN5D@976|Bacteroidetes,2G0R9@200643|Bacteroidia 976|Bacteroidetes L Phage integrase family - - - - - - - - - - - - Phage_integrase BECNEDJF_01940 411477.PARMER_00133 0.0 2141.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia 976|Bacteroidetes H TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_01941 411477.PARMER_00134 0.0 1120.0 COG1435@1|root,COG1435@2|Bacteria,4NE0S@976|Bacteroidetes,2FMZF@200643|Bacteroidia,22X0A@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_01942 411477.PARMER_00135 3.56e-160 448.0 2DC1C@1|root,2ZCDH@2|Bacteria,4NMEB@976|Bacteroidetes,2G2H6@200643|Bacteroidia 976|Bacteroidetes S Protein of unknown function (DUF3823) - - - - - - - - - - - - DUF3823 BECNEDJF_01943 411477.PARMER_00136 0.0 1189.0 COG2755@1|root,COG4783@1|root,COG2755@2|Bacteria,COG4783@2|Bacteria,4NHX6@976|Bacteroidetes 976|Bacteroidetes E chaperone-mediated protein folding - - - - - - - - - - - - Lipase_GDSL_2 BECNEDJF_01944 411477.PARMER_00137 0.0 1228.0 COG2192@1|root,COG2192@2|Bacteria,4NEV9@976|Bacteroidetes,2FR47@200643|Bacteroidia,230HH@171551|Porphyromonadaceae 976|Bacteroidetes O Carbamoyltransferase C-terminus - - - ko:K00612 - - - - ko00000,ko01000 - - - Carbam_trans_C,Carbam_trans_N BECNEDJF_01946 1392490.JHZX01000001_gene1281 4.33e-06 48.5 2CH0Y@1|root,3309M@2|Bacteria,4NY17@976|Bacteroidetes,1I6TX@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_01947 411477.PARMER_00140 0.0 1125.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - BECNEDJF_01948 411477.PARMER_00141 0.0 1052.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 BECNEDJF_01949 411477.PARMER_00142 9.28e-250 687.0 COG0845@1|root,COG0845@2|Bacteria,4NERP@976|Bacteroidetes,2FMFG@200643|Bacteroidia,22XHS@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 BECNEDJF_01950 411477.PARMER_00143 0.0 1907.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22VY6@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family bepE_4 - - ko:K03296,ko:K18138 ko01501,ko01503,map01501,map01503 M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000 2.A.6.2 - - ACR_tran BECNEDJF_01951 411477.PARMER_00144 1.61e-309 844.0 COG1538@1|root,COG1538@2|Bacteria,4NEMI@976|Bacteroidetes,2FMRJ@200643|Bacteroidia,22W2E@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein tolC - - - - - - - - - - - OEP BECNEDJF_01952 411477.PARMER_00145 6.41e-192 532.0 COG4122@1|root,COG4122@2|Bacteria,4NG1S@976|Bacteroidetes,2FNB5@200643|Bacteroidia,22YQI@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score - - - - - - - - - - - - Methyltransf_24 BECNEDJF_01953 411477.PARMER_00147 1.74e-131 373.0 COG2096@1|root,COG2096@2|Bacteria,4NFHQ@976|Bacteroidetes,2FQJ0@200643|Bacteroidia,22Y06@171551|Porphyromonadaceae 976|Bacteroidetes S adenosyltransferase yvqK - 2.5.1.17 ko:K00798 ko00860,ko01100,map00860,map01100 M00122 R01492,R05220,R07268 RC00533 ko00000,ko00001,ko00002,ko01000 - - - Cob_adeno_trans BECNEDJF_01954 411477.PARMER_01501 6.62e-280 764.0 COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,2FQ9F@200643|Bacteroidia,22XNV@171551|Porphyromonadaceae 976|Bacteroidetes S Ser Thr phosphatase family protein - - - ko:K07098 - - - - ko00000 - - - Metallophos BECNEDJF_01955 411477.PARMER_01500 1.36e-266 729.0 COG1408@1|root,COG1408@2|Bacteria,4NFCH@976|Bacteroidetes,2FQ9F@200643|Bacteroidia,22WWB@171551|Porphyromonadaceae 976|Bacteroidetes S Calcineurin-like phosphoesterase superfamily domain - - - ko:K07098 - - - - ko00000 - - - Metallophos BECNEDJF_01956 411477.PARMER_01499 1.04e-91 268.0 COG3177@1|root,COG3177@2|Bacteria 2|Bacteria D Filamentation induced by cAMP protein fic - - - - - - - - - - - - Fic BECNEDJF_01957 411477.PARMER_01498 1.5e-239 679.0 COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia,22VUE@171551|Porphyromonadaceae 976|Bacteroidetes G COG COG3250 Beta-galactosidase beta-glucuronidase csxA_4 - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_01958 999419.HMPREF1077_01477 5.58e-37 134.0 2EZVJ@1|root,33T03@2|Bacteria,4NZUJ@976|Bacteroidetes,2FQB0@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4925) - - - - - - - - - - - - DUF4925 BECNEDJF_01959 411477.PARMER_02816 0.0 1761.0 COG1629@1|root,COG4771@2|Bacteria,4PMUZ@976|Bacteroidetes,2FMM0@200643|Bacteroidia,22ZTD@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_01960 411477.PARMER_02814 2.28e-133 378.0 COG0299@1|root,COG0299@2|Bacteria,4NNZP@976|Bacteroidetes,2FPNN@200643|Bacteroidia,22XY4@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate purN - 2.1.2.2 ko:K11175 ko00230,ko00670,ko01100,ko01110,ko01130,map00230,map00670,map01100,map01110,map01130 M00048 R04325,R04326 RC00026,RC00197,RC01128 ko00000,ko00001,ko00002,ko01000 - - - Formyl_trans_N BECNEDJF_01961 411477.PARMER_02157 0.0 1265.0 COG0171@1|root,COG0388@1|root,COG0171@2|Bacteria,COG0388@2|Bacteria,4NHXQ@976|Bacteroidetes,2FNAT@200643|Bacteroidia,22VUJ@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source nadE - 6.3.5.1 ko:K01950 ko00760,ko01100,map00760,map01100 M00115 R00257 RC00010,RC00100 ko00000,ko00001,ko00002,ko01000 - - - CN_hydrolase,NAD_synthase BECNEDJF_01963 411477.PARMER_02154 1.18e-160 469.0 COG3968@1|root,COG3968@2|Bacteria,4NG2B@976|Bacteroidetes,2FMC9@200643|Bacteroidia,22WEW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the glutamine synthetase family glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - GSIII_N,Gln-synt_C BECNEDJF_01964 411901.BACCAC_01558 2.41e-53 182.0 2B8C0@1|root,321KT@2|Bacteria,4NS0R@976|Bacteroidetes,2FRMF@200643|Bacteroidia,4ANI7@815|Bacteroidaceae 976|Bacteroidetes S COG NOG13976 non supervised orthologous group - - - - - - - - - - - - Methyltransf_21 BECNEDJF_01965 411477.PARMER_00557 0.0 863.0 COG1004@1|root,COG1004@2|Bacteria,4NE00@976|Bacteroidetes,2FMZ9@200643|Bacteroidia,22WMK@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family ugd - 1.1.1.22 ko:K00012 ko00040,ko00053,ko00520,ko01100,map00040,map00053,map00520,map01100 M00014,M00129,M00361,M00362 R00286 RC00291 ko00000,ko00001,ko00002,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N BECNEDJF_01966 999419.HMPREF1077_01415 6.37e-280 764.0 COG0454@1|root,COG0456@2|Bacteria,4NFWE@976|Bacteroidetes,2FNG4@200643|Bacteroidia,22WRZ@171551|Porphyromonadaceae 976|Bacteroidetes K Psort location Cytoplasmic, score 8.96 yghO - - - - - - - - - - - Acetyltransf_1 BECNEDJF_01967 411477.PARMER_00555 0.0 1218.0 COG0187@1|root,COG0187@2|Bacteria,4NF18@976|Bacteroidetes,2FMMD@200643|Bacteroidia,22VXW@171551|Porphyromonadaceae 976|Bacteroidetes L DNA topoisomerase (ATP-hydrolyzing) parE - - ko:K02622 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim BECNEDJF_01968 411477.PARMER_00554 3.28e-122 348.0 COG0669@1|root,COG0669@2|Bacteria,4NM84@976|Bacteroidetes,2FT6A@200643|Bacteroidia,22Y2B@171551|Porphyromonadaceae 976|Bacteroidetes H Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate coaD - 2.7.7.3 ko:K00954 ko00770,ko01100,map00770,map01100 M00120 R03035 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_like BECNEDJF_01969 411477.PARMER_00553 0.0 1031.0 COG0793@1|root,COG0793@2|Bacteria,4NEGV@976|Bacteroidetes,2FN98@200643|Bacteroidia,22WA5@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the peptidase S41A family ctpA - 3.4.21.102 ko:K03797 - - - - ko00000,ko01000,ko01002 - - - PDZ_2,Peptidase_S41 BECNEDJF_01971 411477.PARMER_00551 2.42e-63 193.0 COG3041@1|root,COG3041@2|Bacteria,4NUUP@976|Bacteroidetes,2FVFC@200643|Bacteroidia 976|Bacteroidetes S Bacterial toxin of type II toxin-antitoxin system, YafQ yafQ2 - - ko:K19157 - - - - ko00000,ko01000,ko02048 - - - YafQ_toxin BECNEDJF_01972 411477.PARMER_00550 2.92e-120 343.0 COG2059@1|root,COG2059@2|Bacteria,4NNZ1@976|Bacteroidetes,2FPBG@200643|Bacteroidia,22XYA@171551|Porphyromonadaceae 976|Bacteroidetes P Chromate transporter - - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp BECNEDJF_01973 411477.PARMER_00549 1.88e-124 355.0 COG2059@1|root,COG2059@2|Bacteria,4NNF5@976|Bacteroidetes,2FP4K@200643|Bacteroidia,22XY1@171551|Porphyromonadaceae 976|Bacteroidetes P Chromate transporter - - - ko:K07240 - - - - ko00000,ko02000 2.A.51.1 - - Chromate_transp BECNEDJF_01974 411477.PARMER_00548 1.6e-305 835.0 COG1538@1|root,COG1538@2|Bacteria,4NEEN@976|Bacteroidetes,2FM5G@200643|Bacteroidia,22XC6@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K12340 ko01501,ko01503,ko02020,ko03070,ko04626,ko05133,map01501,map01503,map02020,map03070,map04626,map05133 M00325,M00326,M00339,M00571,M00575,M00646,M00647,M00696,M00697,M00709,M00720,M00821 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko02044 1.B.17,2.A.6.2 - - OEP BECNEDJF_01975 411477.PARMER_00547 7.65e-272 748.0 COG0845@1|root,COG0845@2|Bacteria,4NFT4@976|Bacteroidetes,2FN2G@200643|Bacteroidia,22W7Z@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K02005 - - - - ko00000 - - - HlyD_D23 BECNEDJF_01976 411477.PARMER_00546 1.89e-171 479.0 COG1136@1|root,COG1136@2|Bacteria,4NE5N@976|Bacteroidetes,2FPB3@200643|Bacteroidia,22VYF@171551|Porphyromonadaceae 976|Bacteroidetes V ATPases associated with a variety of cellular activities - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran BECNEDJF_01977 411477.PARMER_00544 2.23e-280 768.0 COG0577@1|root,COG0577@2|Bacteria,4NEBD@976|Bacteroidetes,2FM6F@200643|Bacteroidia,22WK8@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_01978 411477.PARMER_00542 2.31e-241 664.0 COG2972@1|root,COG2972@2|Bacteria,4NGQZ@976|Bacteroidetes,2FMGN@200643|Bacteroidia,22WQN@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase cheA - - - - - - - - - - - HATPase_c_5,His_kinase BECNEDJF_01979 411477.PARMER_00541 3.96e-164 459.0 COG3279@1|root,COG3279@2|Bacteria,4NI3K@976|Bacteroidetes,2FMT1@200643|Bacteroidia,22WEI@171551|Porphyromonadaceae 976|Bacteroidetes KT LytTr DNA-binding domain yehT_1 - - - - - - - - - - - LytTR,Response_reg BECNEDJF_01980 411477.PARMER_00540 0.0 944.0 COG2027@1|root,COG2027@2|Bacteria,4NGIQ@976|Bacteroidetes,2FM0Y@200643|Bacteroidia,22WU4@171551|Porphyromonadaceae 976|Bacteroidetes M D-alanyl-D-alanine carboxypeptidase dacB - 3.4.16.4 ko:K07259 ko00550,map00550 - - - ko00000,ko00001,ko01000,ko01002,ko01011 - - - Peptidase_S13 BECNEDJF_01981 411477.PARMER_00539 1.44e-257 708.0 COG0628@1|root,COG0628@2|Bacteria,4NFHZ@976|Bacteroidetes,2FN2B@200643|Bacteroidia,22X4Y@171551|Porphyromonadaceae 976|Bacteroidetes S Permease - - - - - - - - - - - - AI-2E_transport BECNEDJF_01983 411477.PARMER_02882 3.45e-283 775.0 COG3307@1|root,COG3307@2|Bacteria,4NPAM@976|Bacteroidetes,2FNIA@200643|Bacteroidia,22YVC@171551|Porphyromonadaceae 976|Bacteroidetes M -O-antigen - - - - - - - - - - - - - BECNEDJF_01984 411477.PARMER_02881 9.83e-301 819.0 COG0438@1|root,COG0438@2|Bacteria,4NIP2@976|Bacteroidetes,2FQ2U@200643|Bacteroidia,22X1C@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase Family 4 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_transf_4,Glycos_transf_1 BECNEDJF_01985 411477.PARMER_01584 0.0 1216.0 COG0532@1|root,COG0532@2|Bacteria,4NGP3@976|Bacteroidetes,2FM01@200643|Bacteroidia,22VWZ@171551|Porphyromonadaceae 976|Bacteroidetes J One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex infB - - ko:K02519 - - - - ko00000,ko03012,ko03029 - - - GTP_EFTU,GTP_EFTU_D2,IF-2,IF2_N BECNEDJF_01986 411477.PARMER_01583 9.6e-106 306.0 COG1286@1|root,COG1286@2|Bacteria,4NW4E@976|Bacteroidetes,2FUQ5@200643|Bacteroidia,22YQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Colicin V production protein - - - ko:K03558 - - - - ko00000 - - - Colicin_V BECNEDJF_01987 411477.PARMER_01582 0.0 966.0 COG0719@1|root,COG0719@2|Bacteria,4NFXH@976|Bacteroidetes,2FMUZ@200643|Bacteroidia,22WAX@171551|Porphyromonadaceae 976|Bacteroidetes O Cysteine desulfurase sufB - - ko:K09014 - - - - ko00000 - - - UPF0051 BECNEDJF_01988 411477.PARMER_01581 5.84e-173 483.0 COG0396@1|root,COG0396@2|Bacteria,4NEMY@976|Bacteroidetes,2FMCD@200643|Bacteroidia,22WQ0@171551|Porphyromonadaceae 976|Bacteroidetes O Part of SUF system involved in inserting iron-sulfur clusters into proteins sufC - - ko:K09013 - - - - ko00000,ko02000 - - - ABC_tran BECNEDJF_01989 411477.PARMER_01580 0.0 890.0 COG0719@1|root,COG0719@2|Bacteria,4NFPG@976|Bacteroidetes,2FNCN@200643|Bacteroidia,22VW3@171551|Porphyromonadaceae 976|Bacteroidetes O FeS assembly protein SufD sufD - - ko:K09015 - - - - ko00000 - - - UPF0051 BECNEDJF_01990 411477.PARMER_01579 6.93e-88 258.0 COG0346@1|root,COG0346@2|Bacteria,4NQQA@976|Bacteroidetes,2FKZP@200643|Bacteroidia,22YGJ@171551|Porphyromonadaceae 976|Bacteroidetes E Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily gloA - 4.4.1.5 ko:K01759,ko:K03827 ko00620,map00620 - R02530 RC00004,RC00740 ko00000,ko00001,ko01000 - - - Acetyltransf_3,Glyoxalase,Glyoxalase_4 BECNEDJF_01991 411477.PARMER_01578 2.56e-129 367.0 COG1595@1|root,COG1595@2|Bacteria,4NR7M@976|Bacteroidetes,2FQG7@200643|Bacteroidia,231CR@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_01992 411477.PARMER_01576 0.0 1569.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FNRT@200643|Bacteroidia,22ZMF@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_01993 411477.PARMER_01575 0.0 2227.0 COG0457@1|root,COG0457@2|Bacteria,4NKMF@976|Bacteroidetes,2FXC5@200643|Bacteroidia,231HD@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF5107) - - - - - - - - - - - - DUF5107,TPR_8 BECNEDJF_01994 411477.PARMER_01574 0.0 1078.0 COG0702@1|root,COG0702@2|Bacteria,4NJQQ@976|Bacteroidetes,2FP4E@200643|Bacteroidia 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_01995 411477.PARMER_01573 0.0 2174.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_01996 411477.PARMER_01572 1.79e-306 835.0 COG3712@1|root,COG3712@2|Bacteria,4NJBJ@976|Bacteroidetes,2FQUN@200643|Bacteroidia,22YHT@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_01997 411477.PARMER_01571 1.45e-106 309.0 COG1595@1|root,COG1595@2|Bacteria,4NVCP@976|Bacteroidetes,2FTBY@200643|Bacteroidia,22YK6@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_01998 411477.PARMER_02463 0.0 947.0 COG0793@1|root,COG0793@2|Bacteria,4NJ73@976|Bacteroidetes,2FR31@200643|Bacteroidia,22XBG@171551|Porphyromonadaceae 976|Bacteroidetes M PDZ DHR GLGF domain protein - - - - - - - - - - - - DUF4136,PDZ,PDZ_2 BECNEDJF_02000 411477.PARMER_02518 5.42e-137 402.0 COG0514@1|root,COG0514@2|Bacteria,4NEFD@976|Bacteroidetes,2FMT4@200643|Bacteroidia,22VWK@171551|Porphyromonadaceae 976|Bacteroidetes L ATP-dependent DNA helicase RecQ recQ2 - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,Helicase_C,RecQ_Zn_bind BECNEDJF_02001 999419.HMPREF1077_02595 0.0 1169.0 COG0683@1|root,COG1388@1|root,COG0683@2|Bacteria,COG1388@2|Bacteria,4NG96@976|Bacteroidetes,2FNR1@200643|Bacteroidia,22WGX@171551|Porphyromonadaceae 976|Bacteroidetes M Lysin motif lysM - - - - - - - - - - - ANF_receptor,LysM,Peripla_BP_6 BECNEDJF_02002 411477.PARMER_02515 4.5e-157 440.0 COG3637@1|root,COG3637@2|Bacteria,4NQBX@976|Bacteroidetes,2G3BC@200643|Bacteroidia,22Y6M@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 BECNEDJF_02003 411477.PARMER_02891 0.0 952.0 COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,2FMIC@200643|Bacteroidia,22WKI@171551|Porphyromonadaceae 976|Bacteroidetes F Glutamine phosphoribosylpyrophosphate amidotransferase purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_6,GATase_7,Pribosyltran BECNEDJF_02004 411477.PARMER_02892 0.0 871.0 COG2195@1|root,COG2195@2|Bacteria,4NE7N@976|Bacteroidetes,2FMBF@200643|Bacteroidia,22WC7@171551|Porphyromonadaceae 976|Bacteroidetes E Cleaves the N-terminal amino acid of tripeptides pepT - 3.4.11.4 ko:K01258 - - - - ko00000,ko01000,ko01002 - - - M20_dimer,Peptidase_M20 BECNEDJF_02005 411477.PARMER_00016 1.43e-168 474.0 COG0224@1|root,COG0224@2|Bacteria,4NECM@976|Bacteroidetes,2FP5N@200643|Bacteroidia,22WNB@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex atpG - - ko:K02115 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - ATP-synt BECNEDJF_02008 585543.HMPREF0969_00870 4.44e-293 799.0 COG1522@1|root,COG1940@1|root,COG1522@2|Bacteria,COG1940@2|Bacteria,4NFZ1@976|Bacteroidetes,2FNEQ@200643|Bacteroidia,4AKW9@815|Bacteroidaceae 976|Bacteroidetes GK Psort location Cytoplasmic, score nagC - 2.7.1.2 ko:K00845 ko00010,ko00052,ko00500,ko00520,ko00521,ko00524,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00052,map00500,map00520,map00521,map00524,map01100,map01110,map01120,map01130,map01200 M00001,M00549 R00299,R01600,R01786 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HTH_24,ROK BECNEDJF_02010 411479.BACUNI_03458 1.44e-121 347.0 COG0634@1|root,COG0634@2|Bacteria,4NNIB@976|Bacteroidetes,2FN5J@200643|Bacteroidia,4AMC7@815|Bacteroidaceae 976|Bacteroidetes F Belongs to the purine pyrimidine phosphoribosyltransferase family hpt - 2.4.2.8 ko:K00760 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 - R00190,R01132,R01229,R02142,R08237,R08238,R08245 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran BECNEDJF_02012 999419.HMPREF1077_02284 5.03e-165 461.0 COG0313@1|root,COG0313@2|Bacteria,4NDXE@976|Bacteroidetes,2FN1A@200643|Bacteroidia,22WFR@171551|Porphyromonadaceae 976|Bacteroidetes H Methyltransferase rsmI_1 - 2.1.1.198 ko:K07056 - - - - ko00000,ko01000,ko03009 - - - TP_methylase BECNEDJF_02013 999419.HMPREF1077_02285 1.11e-104 305.0 COG0110@1|root,COG0110@2|Bacteria,4NENC@976|Bacteroidetes,2FP5Y@200643|Bacteroidia,22WU1@171551|Porphyromonadaceae 976|Bacteroidetes S Bacterial transferase hexapeptide repeat - - 2.3.1.201 ko:K13018 ko00520,map00520 - R10100 RC00004,RC00166 ko00000,ko00001,ko01000,ko01005 - - - Hexapep,Hexapep_2 BECNEDJF_02014 411477.PARMER_03792 1.51e-201 558.0 COG0157@1|root,COG0157@2|Bacteria,4NDXF@976|Bacteroidetes,2FMJM@200643|Bacteroidia,22X4A@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the NadC ModD family nadC - 2.4.2.19 ko:K00767 ko00760,ko01100,map00760,map01100 M00115 R03348 RC02877 ko00000,ko00001,ko00002,ko01000 - - - QRPTase_C,QRPTase_N BECNEDJF_02015 999419.HMPREF1077_02287 1.12e-78 234.0 2E4AG@1|root,32Z66@2|Bacteria,4NUXA@976|Bacteroidetes,2FSMC@200643|Bacteroidia,22YXI@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4783) - - - - - - - - - - - - DUF4783 BECNEDJF_02016 411477.PARMER_03596 3.16e-119 341.0 COG1595@1|root,COG1595@2|Bacteria,4NQCH@976|Bacteroidetes,2FSRW@200643|Bacteroidia,22Y21@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02017 411477.PARMER_03595 0.0 1011.0 COG1649@1|root,COG1649@2|Bacteria,4NHEB@976|Bacteroidetes,2FMZJ@200643|Bacteroidia,22XHM@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyl hydrolase-like 10 yngK - - - - - - - - - - - GHL10 BECNEDJF_02018 411477.PARMER_03594 2.79e-179 499.0 COG0584@1|root,COG0584@2|Bacteria,4NMGN@976|Bacteroidetes,2FP5M@200643|Bacteroidia,22XX0@171551|Porphyromonadaceae 976|Bacteroidetes C Glycerophosphoryl diester phosphodiesterase family - - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - GDPD BECNEDJF_02019 999419.HMPREF1077_01812 1.86e-94 275.0 COG0824@1|root,COG0824@2|Bacteria,4NSJR@976|Bacteroidetes,2FS2E@200643|Bacteroidia,22Y6W@171551|Porphyromonadaceae 976|Bacteroidetes S acyl-CoA thioester hydrolase, YbgC YbaW family - - - ko:K07107 - - - - ko00000,ko01000 - - - 4HBT,4HBT_2 BECNEDJF_02020 411477.PARMER_00108 3.85e-300 819.0 COG0826@1|root,COG0826@2|Bacteria,4NERN@976|Bacteroidetes,2FN1E@200643|Bacteroidia,22VVZ@171551|Porphyromonadaceae 976|Bacteroidetes O collagenase prtC - - ko:K08303 ko05120,map05120 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_U32 BECNEDJF_02021 411477.PARMER_00114 2.77e-249 684.0 COG0042@1|root,COG0042@2|Bacteria,4NEN4@976|Bacteroidetes,2FM9Z@200643|Bacteroidia,22WST@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines dus - - - - - - - - - - - Dus BECNEDJF_02023 411477.PARMER_00116 1.45e-182 507.0 COG0479@1|root,COG0479@2|Bacteria,4NFR3@976|Bacteroidetes,2FP6Q@200643|Bacteroidia,22W4E@171551|Porphyromonadaceae 976|Bacteroidetes C succinate dehydrogenase frdB - 1.3.5.1,1.3.5.4 ko:K00240 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - Fer2_3,Fer4_7,Fer4_8 BECNEDJF_02024 411477.PARMER_00117 0.0 1301.0 COG1053@1|root,COG1053@2|Bacteria,4NFDU@976|Bacteroidetes,2FM67@200643|Bacteroidia,22WBE@171551|Porphyromonadaceae 976|Bacteroidetes C SdhA B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC D which are the membrane components and form cytochrome b556 sdhA - 1.3.5.1,1.3.5.4 ko:K00239 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,ko05134,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200,map05134 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002,ko01000 - - - FAD_binding_2,Succ_DH_flav_C BECNEDJF_02025 411477.PARMER_00118 2.82e-162 454.0 2CAZH@1|root,2Z7RU@2|Bacteria,4NGM5@976|Bacteroidetes,2FM2S@200643|Bacteroidia,22WYG@171551|Porphyromonadaceae 976|Bacteroidetes S fumarate reductase sdhC - - ko:K00241 ko00020,ko00190,ko00650,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00190,map00650,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00149,M00173,M00374,M00376 R02164 RC00045 ko00000,ko00001,ko00002 - - - Sdh_cyt BECNEDJF_02026 411477.PARMER_00120 3.74e-243 666.0 COG3828@1|root,COG3828@2|Bacteria,4NEWH@976|Bacteroidetes,2FQY6@200643|Bacteroidia,2305F@171551|Porphyromonadaceae 976|Bacteroidetes S Methane oxygenase PmoA - - - - - - - - - - - - PmoA BECNEDJF_02027 411477.PARMER_00125 0.0 2199.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22VWX@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02028 411477.PARMER_00126 0.0 1255.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia,22Z73@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02029 411477.PARMER_00127 0.0 1152.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - BECNEDJF_02030 411477.PARMER_00128 0.0 989.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 BECNEDJF_02031 411477.PARMER_00129 0.0 1427.0 COG3669@1|root,COG3669@2|Bacteria,4NEDX@976|Bacteroidetes,2FNFV@200643|Bacteroidia,22WIN@171551|Porphyromonadaceae 976|Bacteroidetes G F5 8 type C domain protein - - 3.2.1.51 ko:K01206 ko00511,map00511 - - - ko00000,ko00001,ko01000,ko04147 - GH29 - Alpha_L_fucos,CHB_HEX_C_1,F5_F8_type_C,Fn3_assoc BECNEDJF_02032 411477.PARMER_04200 8.42e-102 295.0 COG0691@1|root,COG0691@2|Bacteria,4NNJU@976|Bacteroidetes,2FQX0@200643|Bacteroidia,22XVF@171551|Porphyromonadaceae 976|Bacteroidetes O the 2 termini fold to resemble tRNA(Ala) and it encodes a tag peptide , a short internal open reading frame. During trans-translation Ala- aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to translate the ORF on the tmRNA smpB - - ko:K03664 - - - - ko00000 - - - SmpB BECNEDJF_02033 411477.PARMER_04201 4.42e-130 369.0 2DNHM@1|root,32UIZ@2|Bacteria,4NT16@976|Bacteroidetes,2FN7P@200643|Bacteroidia,22YD3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1282) - - - - - - - - - - - - DUF1282 BECNEDJF_02035 411477.PARMER_04204 3.66e-186 518.0 COG2103@1|root,COG2103@2|Bacteria,4NEPY@976|Bacteroidetes,2FNYH@200643|Bacteroidia,22W3R@171551|Porphyromonadaceae 976|Bacteroidetes G Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate murQ - 4.2.1.126 ko:K07106 ko00520,ko01100,map00520,map01100 - R08555 RC00397,RC00746 ko00000,ko00001,ko01000 - - - SIS BECNEDJF_02036 999419.HMPREF1077_02463 1.12e-249 687.0 COG2706@1|root,COG2706@2|Bacteria,4NE87@976|Bacteroidetes,2FMKW@200643|Bacteroidia,22XJY@171551|Porphyromonadaceae 976|Bacteroidetes G Lactonase, 7-bladed beta-propeller pgl - 3.1.1.31 ko:K07404 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Lactonase BECNEDJF_02037 411477.PARMER_04207 0.0 880.0 COG3458@1|root,COG3458@2|Bacteria,4NGH5@976|Bacteroidetes,2FMD6@200643|Bacteroidia,22WER@171551|Porphyromonadaceae 976|Bacteroidetes Q Acetyl xylan esterase (AXE1) - - - - - - - - - - - - AXE1,Glyco_hydro_26 BECNEDJF_02038 411477.PARMER_04208 2.15e-200 555.0 COG2971@1|root,COG2971@2|Bacteria,4NEV4@976|Bacteroidetes,2FNFM@200643|Bacteroidia,22WIC@171551|Porphyromonadaceae 976|Bacteroidetes G Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - BcrAD_BadFG BECNEDJF_02039 411477.PARMER_04209 0.0 863.0 COG0477@1|root,COG2814@2|Bacteria,4NG5F@976|Bacteroidetes,2FPA7@200643|Bacteroidia,22WH2@171551|Porphyromonadaceae 976|Bacteroidetes EGP BT1 family - - - ko:K08218 ko01501,map01501 M00628 - - ko00000,ko00001,ko00002,ko02000 2.A.1.25 - - BT1,MFS_1 BECNEDJF_02040 411477.PARMER_04210 1.05e-233 643.0 COG4360@1|root,COG4360@2|Bacteria,4NHAH@976|Bacteroidetes,2FMAC@200643|Bacteroidia,22WKR@171551|Porphyromonadaceae 976|Bacteroidetes F Domain of unknown function (DUF4922) - - - - - - - - - - - - DUF4922 BECNEDJF_02041 411477.PARMER_04211 0.0 983.0 COG0463@1|root,COG0463@2|Bacteria,4NEQ9@976|Bacteroidetes,2G2IE@200643|Bacteroidia,22WXI@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 2 - - - - - - - - - - - - DUF4922,Glycos_transf_2,SpoIID BECNEDJF_02042 411477.PARMER_04213 0.0 899.0 COG0793@1|root,COG0793@2|Bacteria,4NFKJ@976|Bacteroidetes,2FNZE@200643|Bacteroidia,22Y3M@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family S41 - - - - - - - - - - - - PDZ,PDZ_2,Peptidase_S41 BECNEDJF_02043 411477.PARMER_04215 0.0 1447.0 COG1884@1|root,COG2185@1|root,COG1884@2|Bacteria,COG2185@2|Bacteria,4NFS0@976|Bacteroidetes,2FNWM@200643|Bacteroidia,22WFX@171551|Porphyromonadaceae 976|Bacteroidetes I Methylmalonyl-CoA mutase mutB - 5.4.99.2 ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - B12-binding,MM_CoA_mutase BECNEDJF_02044 411477.PARMER_04216 0.0 1231.0 COG1884@1|root,COG1884@2|Bacteria,4NDVE@976|Bacteroidetes,2FM0R@200643|Bacteroidia,22X3V@171551|Porphyromonadaceae 976|Bacteroidetes I Methylmalonyl-CoA mutase mutA - 5.4.99.2 ko:K01847 ko00280,ko00630,ko00640,ko00720,ko01100,ko01120,ko01200,map00280,map00630,map00640,map00720,map01100,map01120,map01200 M00373,M00376,M00741 R00833 RC00395 ko00000,ko00001,ko00002,ko01000 - - - MM_CoA_mutase BECNEDJF_02046 999419.HMPREF1077_02453 1.09e-293 801.0 COG1524@1|root,COG1524@2|Bacteria,4NFFG@976|Bacteroidetes,2FNFJ@200643|Bacteroidia,22WMT@171551|Porphyromonadaceae 976|Bacteroidetes S phosphodiesterase - - 3.1.3.1 ko:K01113 ko00790,ko01100,ko02020,map00790,map01100,map02020 M00126 R04620 RC00017 ko00000,ko00001,ko00002,ko01000 - - - Phosphodiest BECNEDJF_02047 411477.PARMER_04220 0.0 921.0 COG1629@1|root,COG4771@2|Bacteria,4NF66@976|Bacteroidetes,2FKYY@200643|Bacteroidia,22X50@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarboxypepD_reg,Plug,TonB_dep_Rec BECNEDJF_02048 411477.PARMER_02345 1.39e-185 523.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMRV@200643|Bacteroidia,22W60@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains zraR_2 - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat BECNEDJF_02049 411477.PARMER_02344 2.39e-310 846.0 COG5000@1|root,COG5000@2|Bacteria,4NEWF@976|Bacteroidetes,2FMRD@200643|Bacteroidia,22WZW@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - - - - - - - - - - - HATPase_c,PAS_8 BECNEDJF_02052 411477.PARMER_03009 2.1e-126 389.0 COG1262@1|root,COG1262@2|Bacteria,4NKT6@976|Bacteroidetes,2FR3S@200643|Bacteroidia 976|Bacteroidetes S Sulfatase-modifying factor enzyme 1 - - - - - - - - - - - - FGE-sulfatase,NPCBM BECNEDJF_02053 411477.PARMER_03007 0.0 1783.0 COG0419@1|root,COG0419@2|Bacteria,4NH9H@976|Bacteroidetes,2FPAQ@200643|Bacteroidia,22WKY@171551|Porphyromonadaceae 976|Bacteroidetes L Putative exonuclease SbcCD, C subunit sbcC - - ko:K03546 - - - - ko00000,ko03400 - - - AAA_23,SbcCD_C BECNEDJF_02054 411477.PARMER_03006 1.79e-306 834.0 COG0420@1|root,COG0420@2|Bacteria,4NEET@976|Bacteroidetes,2FN3W@200643|Bacteroidia,22XGK@171551|Porphyromonadaceae 976|Bacteroidetes L SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'- 5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity sbcD - - ko:K03547 - - - - ko00000,ko03400 - - - Metallophos,SbcD_C BECNEDJF_02055 411477.PARMER_03005 0.0 1048.0 COG0569@1|root,COG2985@1|root,COG0569@2|Bacteria,COG2985@2|Bacteria,4NEBW@976|Bacteroidetes,2FMDF@200643|Bacteroidia,22W10@171551|Porphyromonadaceae 976|Bacteroidetes P TrkA C-terminal domain protein - - - ko:K07085 - - - - ko00000 2.A.81 - - Asp-Al_Ex,TrkA_C BECNEDJF_02056 411477.PARMER_03004 1.11e-283 775.0 COG2265@1|root,COG2265@2|Bacteria,4PKBS@976|Bacteroidetes,2G3EC@200643|Bacteroidia,231MW@171551|Porphyromonadaceae 976|Bacteroidetes J (SAM)-dependent - - - - - - - - - - - - Cons_hypoth95,Methyltransf_15 BECNEDJF_02058 411477.PARMER_03002 1.01e-137 388.0 COG1592@1|root,COG1592@2|Bacteria,4NJ7V@976|Bacteroidetes,2FP1G@200643|Bacteroidia,22X1G@171551|Porphyromonadaceae 976|Bacteroidetes C Rubrerythrin rbr3A - - - - - - - - - - - Rubrerythrin BECNEDJF_02059 411477.PARMER_03001 5.67e-258 706.0 COG1830@1|root,COG1830@2|Bacteria,4NEUM@976|Bacteroidetes,2FKZ7@200643|Bacteroidia,22WU7@171551|Porphyromonadaceae 976|Bacteroidetes G DeoC/LacD family aldolase fbaB - 4.1.2.13 ko:K11645 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00003 R01068,R01070,R01829,R02568 RC00438,RC00439,RC00603,RC00604 ko00000,ko00001,ko00002,ko01000 - - - DeoC BECNEDJF_02060 411477.PARMER_03000 0.0 1429.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NHS5@976|Bacteroidetes,2FN1K@200643|Bacteroidia,22WZR@171551|Porphyromonadaceae 976|Bacteroidetes EU peptidase pop - - - - - - - - - - - PD40,Peptidase_S9 BECNEDJF_02061 411477.PARMER_02999 2.28e-108 312.0 COG3087@1|root,COG3087@2|Bacteria,4NU0A@976|Bacteroidetes,2FPJ1@200643|Bacteroidia,22YJR@171551|Porphyromonadaceae 976|Bacteroidetes D cell division - - - - - - - - - - - - SPOR BECNEDJF_02062 411477.PARMER_02998 0.0 1178.0 COG0481@1|root,COG0481@2|Bacteria,4NEJ9@976|Bacteroidetes,2FM9V@200643|Bacteroidia,22WXD@171551|Porphyromonadaceae 976|Bacteroidetes M Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back- translocation proceeds from a post-translocation (POST) complex to a pre-translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP-dependent manner lepA - - ko:K03596 ko05134,map05134 - - - ko00000,ko00001 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2,LepA_C BECNEDJF_02063 411477.PARMER_02997 0.0 1306.0 COG0457@1|root,COG0457@2|Bacteria,4NFFS@976|Bacteroidetes,2FMYG@200643|Bacteroidia,22X3M@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeats - - - - - - - - - - - - TPR_12,TPR_16,TPR_19,TPR_6,TPR_7,TPR_8 BECNEDJF_02064 999419.HMPREF1077_01126 2.39e-30 107.0 2DT1D@1|root,33I8Q@2|Bacteria,4NZ02@976|Bacteroidetes,2FVES@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02065 411477.PARMER_02995 9.53e-207 572.0 COG0524@1|root,COG0524@2|Bacteria,4NGFK@976|Bacteroidetes,2FN72@200643|Bacteroidia,22WT2@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB BECNEDJF_02066 411477.PARMER_02994 0.0 952.0 COG0745@1|root,COG1879@1|root,COG2207@1|root,COG5002@1|root,COG0745@2|Bacteria,COG1879@2|Bacteria,COG2207@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia,22Z9K@171551|Porphyromonadaceae 976|Bacteroidetes T Periplasmic binding proteins and sugar binding domain of LacI family - - - - - - - - - - - - HATPase_c,HTH_18,HTH_AraC,HisKA,Peripla_BP_4,Reg_prop,Response_reg,Y_Y_Y BECNEDJF_02068 1121098.HMPREF1534_00597 5.22e-153 430.0 COG1533@1|root,COG1533@2|Bacteria,4P2UW@976|Bacteroidetes,2FS17@200643|Bacteroidia,4AQB0@815|Bacteroidaceae 976|Bacteroidetes L DNA photolyase activity - - - - - - - - - - - - - BECNEDJF_02069 411479.BACUNI_03712 2.22e-232 637.0 COG5545@1|root,COG5545@2|Bacteria,4PB5P@976|Bacteroidetes,2FRMI@200643|Bacteroidia,4APAS@815|Bacteroidaceae 976|Bacteroidetes S VirE N-terminal domain - - - - - - - - - - - - VirE_N BECNEDJF_02071 411477.PARMER_01637 5.59e-313 855.0 COG0702@1|root,COG0702@2|Bacteria,4NEPE@976|Bacteroidetes,2FNTP@200643|Bacteroidia,231I8@171551|Porphyromonadaceae 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02072 411477.PARMER_01636 0.0 1217.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22X4D@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02075 411477.PARMER_00495 9.82e-70 211.0 2F7EQ@1|root,33ZVJ@2|Bacteria,4P4RZ@976|Bacteroidetes,2FY6S@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02076 411477.PARMER_00496 5.62e-74 223.0 COG3436@1|root,COG3436@2|Bacteria,4NV0F@976|Bacteroidetes,2FSTJ@200643|Bacteroidia 976|Bacteroidetes L PFAM IS66 Orf2 like protein - - - ko:K07484 - - - - ko00000 - - - TnpB_IS66 BECNEDJF_02077 411477.PARMER_00498 3.03e-105 303.0 COG3774@1|root,COG3774@2|Bacteria,4NT2T@976|Bacteroidetes,2FV3Q@200643|Bacteroidia 976|Bacteroidetes M Glycosyltransferase sugar-binding region containing DXD motif - - - - - - - - - - - - Gly_transf_sug BECNEDJF_02079 411477.PARMER_00299 1.51e-26 102.0 COG0457@1|root,COG0457@2|Bacteria,4PHIR@976|Bacteroidetes,2FRSJ@200643|Bacteroidia 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - - BECNEDJF_02081 411477.PARMER_00503 3.44e-281 795.0 COG0457@1|root,COG0457@2|Bacteria,4NGGZ@976|Bacteroidetes,2FMHN@200643|Bacteroidia,22WD9@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_1,TPR_11,TPR_16,TPR_2,TPR_6,TPR_8,TPR_9 BECNEDJF_02082 411477.PARMER_00504 5.41e-73 219.0 COG4770@1|root,COG4770@2|Bacteria,4NWQ0@976|Bacteroidetes,2FUXX@200643|Bacteroidia,22YSD@171551|Porphyromonadaceae 976|Bacteroidetes I Biotin-requiring enzyme - - - - - - - - - - - - Biotin_lipoyl BECNEDJF_02083 411477.PARMER_00505 0.0 1016.0 COG4799@1|root,COG4799@2|Bacteria,4NEMJ@976|Bacteroidetes,2FPY6@200643|Bacteroidia,22X9X@171551|Porphyromonadaceae 976|Bacteroidetes I COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta) - - - - - - - - - - - - Carboxyl_trans BECNEDJF_02084 411477.PARMER_00506 1.95e-127 362.0 COG0242@1|root,COG0242@2|Bacteria,4NFB4@976|Bacteroidetes,2FNEJ@200643|Bacteroidia,22XVR@171551|Porphyromonadaceae 976|Bacteroidetes J Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions def - 3.5.1.88 ko:K01462 - - - - ko00000,ko01000 - - - Pep_deformylase BECNEDJF_02085 999419.HMPREF1077_03631 1.13e-98 286.0 COG0816@1|root,COG0816@2|Bacteria,4NQ8B@976|Bacteroidetes,2FT2Q@200643|Bacteroidia,22Y74@171551|Porphyromonadaceae 976|Bacteroidetes L Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA ruvX GO:0000966,GO:0000967,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0034470,GO:0034471,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0044085,GO:0044237,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0071840,GO:0090304,GO:1901360 - ko:K07447 - - - - ko00000,ko01000 - - - RuvX BECNEDJF_02086 411477.PARMER_00508 0.0 909.0 COG1086@1|root,COG2148@1|root,COG1086@2|Bacteria,COG2148@2|Bacteria,4NER4@976|Bacteroidetes,2FNC2@200643|Bacteroidia,22VY7@171551|Porphyromonadaceae 976|Bacteroidetes M CoA-binding domain wcaJ_2 - 2.7.8.6 ko:K00996,ko:K03606 ko05111,map05111 - - - ko00000,ko00001,ko01000,ko01005 - - - Bac_transf,CoA_binding_3 BECNEDJF_02087 411477.PARMER_00509 1.62e-280 766.0 COG2885@1|root,COG2885@2|Bacteria,4NKQC@976|Bacteroidetes,2FRBK@200643|Bacteroidia,22X13@171551|Porphyromonadaceae 976|Bacteroidetes M membrane - GO:0001871,GO:0003674,GO:0005215,GO:0005488,GO:0005575,GO:0006810,GO:0008150,GO:0015267,GO:0015288,GO:0016020,GO:0019867,GO:0022803,GO:0022829,GO:0022857,GO:0030246,GO:0030247,GO:0051179,GO:0051234,GO:0055085 - - - - - - - - - - OmpA BECNEDJF_02088 411477.PARMER_00510 4.14e-278 760.0 COG1089@1|root,COG1089@2|Bacteria,4NEB6@976|Bacteroidetes,2FMUP@200643|Bacteroidia,22X5T@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose gmd - 4.2.1.47 ko:K01711 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R00888 RC00402 ko00000,ko00001,ko01000 - - - GDP_Man_Dehyd BECNEDJF_02089 411477.PARMER_00511 1.85e-265 726.0 COG0451@1|root,COG0451@2|Bacteria,4NDV4@976|Bacteroidetes,2FNA5@200643|Bacteroidia,22W0D@171551|Porphyromonadaceae 976|Bacteroidetes GM Catalyzes the two-step NADP-dependent conversion of GDP- 4-dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction fcl - 1.1.1.271 ko:K02377 ko00051,ko00520,ko01100,map00051,map00520,map01100 - R05692 RC01014 ko00000,ko00001,ko01000 - - - Epimerase BECNEDJF_02090 411477.PARMER_00512 7.89e-213 587.0 COG1209@1|root,COG1209@2|Bacteria,4NE1U@976|Bacteroidetes,2FNUA@200643|Bacteroidia,22WZT@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis rfbA - 2.7.7.24 ko:K00973 ko00521,ko00523,ko00525,ko01130,map00521,map00523,map00525,map01130 M00793 R02328 RC00002 ko00000,ko00001,ko00002,ko01000 - - - NTP_transferase BECNEDJF_02092 411477.PARMER_00514 6e-130 369.0 COG3247@1|root,COG3247@2|Bacteria,4NQZ1@976|Bacteroidetes,2FMHV@200643|Bacteroidia,22YJF@171551|Porphyromonadaceae 976|Bacteroidetes S Short repeat of unknown function (DUF308) - - - - - - - - - - - - DUF308 BECNEDJF_02093 411477.PARMER_00515 9.6e-246 674.0 2EU8H@1|root,33MQX@2|Bacteria,4NY8F@976|Bacteroidetes,2FQF7@200643|Bacteroidia,2315B@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4249) - - - - - - - - - - - - DUF4249 BECNEDJF_02094 411477.PARMER_00516 2.8e-38 141.0 COG1629@1|root,COG4771@2|Bacteria,4NF4B@976|Bacteroidetes,2FM7I@200643|Bacteroidia,22XCB@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02095 411477.PARMER_00245 8.35e-285 791.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - GAF,HATPase_c,HisKA,PAS_4,PAS_9 BECNEDJF_02096 411477.PARMER_00242 0.0 1115.0 COG0441@1|root,COG0572@1|root,COG0441@2|Bacteria,COG0572@2|Bacteria,4NIHT@976|Bacteroidetes,2FP3D@200643|Bacteroidia,22VXU@171551|Porphyromonadaceae 976|Bacteroidetes FJ ATPase (AAA udk2 - 2.7.1.48 ko:K00876 ko00240,ko00983,ko01100,map00240,map00983,map01100 - R00513,R00516,R00517,R00962,R00964,R00967,R00968,R00970,R01548,R01549,R01880,R02091,R02096,R02097,R02327,R02332,R02371,R02372,R08232 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PRK BECNEDJF_02097 411477.PARMER_00241 0.0 1032.0 COG1283@1|root,COG1283@2|Bacteria,4NHMY@976|Bacteroidetes,2FMJB@200643|Bacteroidia,22WCR@171551|Porphyromonadaceae 976|Bacteroidetes P Na Pi-cotransporter II-like protein - - - ko:K03324 - - - - ko00000,ko02000 2.A.58.2 - - Na_Pi_cotrans,PhoU BECNEDJF_02098 411477.PARMER_00240 0.0 990.0 COG2721@1|root,COG2721@2|Bacteria,4NFVQ@976|Bacteroidetes,2FPGJ@200643|Bacteroidia,22WYT@171551|Porphyromonadaceae 976|Bacteroidetes G D-galactarate dehydratase / Altronate hydrolase, C terminus uxaA - 4.2.1.42,4.2.1.7 ko:K01685,ko:K01708 ko00040,ko00053,ko01100,map00040,map00053,map01100 M00631 R01540,R05608 RC00543 ko00000,ko00001,ko00002,ko01000 - - - GD_AH_C,SAF BECNEDJF_02099 411477.PARMER_00239 0.0 969.0 COG0246@1|root,COG0246@2|Bacteria,4NEMT@976|Bacteroidetes,2FNTW@200643|Bacteroidia,22XJN@171551|Porphyromonadaceae 976|Bacteroidetes G Mannitol dehydrogenase Rossmann domain uxaB GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0005996,GO:0006063,GO:0006082,GO:0008150,GO:0008152,GO:0009026,GO:0009056,GO:0009987,GO:0016052,GO:0016054,GO:0016491,GO:0016614,GO:0016616,GO:0019586,GO:0019698,GO:0019752,GO:0032787,GO:0036094,GO:0043436,GO:0044237,GO:0044238,GO:0044248,GO:0044281,GO:0044282,GO:0044424,GO:0044444,GO:0044464,GO:0046365,GO:0046395,GO:0046396,GO:0046397,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0071704,GO:0072329,GO:0097159,GO:1901265,GO:1901363,GO:1901575 1.1.1.17,1.1.1.58 ko:K00009,ko:K00041 ko00040,ko00051,ko01100,map00040,map00051,map01100 M00631 R02555,R02703 RC00085 ko00000,ko00001,ko00002,ko01000 - - - Mannitol_dh,Mannitol_dh_C BECNEDJF_02101 411477.PARMER_00237 1.91e-221 609.0 COG3386@1|root,COG3386@2|Bacteria,4NMJX@976|Bacteroidetes,2FRZF@200643|Bacteroidia 976|Bacteroidetes G SMP-30/Gluconolaconase/LRE-like region - - - ko:K14274 ko00040,map00040 - R02427 RC00713 ko00000,ko00001,ko01000 - - - SGL BECNEDJF_02102 411477.PARMER_00236 0.0 1383.0 COG0557@1|root,COG0557@2|Bacteria,4NE7T@976|Bacteroidetes,2FMM6@200643|Bacteroidia,22VY8@171551|Porphyromonadaceae 976|Bacteroidetes J 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs rnr - - ko:K12573,ko:K12585 ko03018,map03018 M00391 - - ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - OB_RNB,RNB,S1 BECNEDJF_02103 411477.PARMER_00235 1.07e-43 142.0 2C4GM@1|root,33DB5@2|Bacteria,4NY7G@976|Bacteroidetes,2FW01@200643|Bacteroidia,22YXA@171551|Porphyromonadaceae 976|Bacteroidetes S Immunity protein 17 - - - - - - - - - - - - Imm17 BECNEDJF_02104 411477.PARMER_00234 6.4e-97 281.0 COG0802@1|root,COG0802@2|Bacteria,4NS89@976|Bacteroidetes,2FS1V@200643|Bacteroidia,22XWD@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase, P-loop family yjeE - - ko:K06925 - - - - ko00000,ko03016 - - - TsaE BECNEDJF_02105 411477.PARMER_00232 0.0 1036.0 COG0745@1|root,COG0745@2|Bacteria,4PM6N@976|Bacteroidetes,2G0CY@200643|Bacteroidia,2323Q@171551|Porphyromonadaceae 976|Bacteroidetes T PglZ domain - - - - - - - - - - - - PglZ,Response_reg BECNEDJF_02106 411477.PARMER_00231 0.0 1727.0 COG3250@1|root,COG3250@2|Bacteria,4NEWN@976|Bacteroidetes,2FPM1@200643|Bacteroidia,22W9F@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family bga GO:0000272,GO:0003674,GO:0003824,GO:0004553,GO:0004565,GO:0005975,GO:0005976,GO:0006073,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009251,GO:0009987,GO:0010383,GO:0010410,GO:0010411,GO:0015925,GO:0016052,GO:0016787,GO:0016798,GO:0043170,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044260,GO:0044262,GO:0044264,GO:0044403,GO:0044419,GO:0051704,GO:0071554,GO:0071704,GO:0085030,GO:1901575,GO:2000895,GO:2000899 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_02107 411477.PARMER_00229 3.13e-99 288.0 COG0756@1|root,COG0756@2|Bacteria,4NNI4@976|Bacteroidetes,2FR7A@200643|Bacteroidia,22XVH@171551|Porphyromonadaceae 976|Bacteroidetes F This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA dut GO:0000287,GO:0003674,GO:0003824,GO:0004170,GO:0005488,GO:0006139,GO:0006220,GO:0006221,GO:0006226,GO:0006244,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009129,GO:0009130,GO:0009141,GO:0009143,GO:0009147,GO:0009149,GO:0009157,GO:0009162,GO:0009165,GO:0009166,GO:0009176,GO:0009177,GO:0009200,GO:0009204,GO:0009211,GO:0009213,GO:0009219,GO:0009221,GO:0009223,GO:0009262,GO:0009263,GO:0009264,GO:0009265,GO:0009394,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0019692,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0043167,GO:0043169,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0046078,GO:0046080,GO:0046081,GO:0046385,GO:0046386,GO:0046434,GO:0046483,GO:0046700,GO:0046872,GO:0047429,GO:0055086,GO:0071704,GO:0072527,GO:0072528,GO:0072529,GO:0090407,GO:1901135,GO:1901136,GO:1901137,GO:1901292,GO:1901293,GO:1901360,GO:1901361,GO:1901362,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576 3.6.1.23 ko:K01520 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00053 R02100,R11896 RC00002 ko00000,ko00001,ko00002,ko01000,ko03400 - - - dUTPase BECNEDJF_02108 411477.PARMER_00228 0.0 1122.0 COG0457@1|root,COG0457@2|Bacteria,4NDVW@976|Bacteroidetes,2FMY8@200643|Bacteroidia,22WHK@171551|Porphyromonadaceae 976|Bacteroidetes NU Tetratricopeptide repeat - - - - - - - - - - - - TPR_16,TPR_19,TPR_2,TPR_6,TPR_8 BECNEDJF_02109 999419.HMPREF1077_03584 0.0 1560.0 COG0542@1|root,COG0542@2|Bacteria,4NGEM@976|Bacteroidetes,2FM5N@200643|Bacteroidia,22WE7@171551|Porphyromonadaceae 976|Bacteroidetes O Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE clpB - - ko:K03695 ko04213,map04213 - - - ko00000,ko00001,ko03110 - - - AAA,AAA_2,ClpB_D2-small,Clp_N BECNEDJF_02111 411477.PARMER_02134 5.55e-292 795.0 COG0505@1|root,COG0505@2|Bacteria,4NEQI@976|Bacteroidetes,2FMSR@200643|Bacteroidia,22WBW@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the CarA family carA - 6.3.5.5 ko:K01956 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_sm_chain,GATase BECNEDJF_02112 411477.PARMER_02135 1.72e-42 152.0 COG0034@1|root,COG0034@2|Bacteria,4NFSM@976|Bacteroidetes,2FM3Y@200643|Bacteroidia,22W9N@171551|Porphyromonadaceae 976|Bacteroidetes F amidophosphoribosyltransferase purF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - GATase_7 BECNEDJF_02113 411477.PARMER_00911 0.0 865.0 COG0577@1|root,COG0577@2|Bacteria,4NHA3@976|Bacteroidetes,2FSB7@200643|Bacteroidia,22Z98@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_02114 411477.PARMER_00910 8.26e-290 793.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes,2FR5S@200643|Bacteroidia,231S6@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_02115 411477.PARMER_00909 3.12e-311 847.0 COG0577@1|root,COG0577@2|Bacteria,4NHA3@976|Bacteroidetes,2FSB7@200643|Bacteroidia 976|Bacteroidetes V Efflux ABC transporter, permease protein - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_02116 411477.PARMER_00908 6.18e-269 740.0 COG0577@1|root,COG0577@2|Bacteria,4NI8K@976|Bacteroidetes,2FN4D@200643|Bacteroidia,22ZYF@171551|Porphyromonadaceae 976|Bacteroidetes V MacB-like periplasmic core domain - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_02117 411477.PARMER_00907 6.86e-277 761.0 COG0845@1|root,COG0845@2|Bacteria,4NIJI@976|Bacteroidetes,2FNGW@200643|Bacteroidia,22WWG@171551|Porphyromonadaceae 976|Bacteroidetes M HlyD family secretion protein - - - ko:K02005 - - - - ko00000 - - - Biotin_lipoyl_2,HlyD_3,OEP BECNEDJF_02119 411477.PARMER_00905 3.2e-206 570.0 295Z7@1|root,33C4F@2|Bacteria,4NZ3X@976|Bacteroidetes,2G0F8@200643|Bacteroidia 976|Bacteroidetes S Putative beta-lactamase-inhibitor-like, PepSY-like - - - - - - - - - - - - PepSY_like BECNEDJF_02120 411477.PARMER_00904 0.0 1726.0 COG3250@1|root,COG3250@2|Bacteria,4NEWN@976|Bacteroidetes,2FPM1@200643|Bacteroidia,22WWF@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_02121 411477.PARMER_00903 6.84e-293 802.0 COG2704@1|root,COG2704@2|Bacteria,4NGDF@976|Bacteroidetes,2FMD5@200643|Bacteroidia,22XEM@171551|Porphyromonadaceae 976|Bacteroidetes S Anaerobic c4-dicarboxylate membrane transporter dcuB - - ko:K07791,ko:K07792 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.13.1 - - DcuA_DcuB BECNEDJF_02122 411477.PARMER_00902 0.0 1092.0 COG5002@1|root,COG5002@2|Bacteria,4NDTV@976|Bacteroidetes,2FP04@200643|Bacteroidia,22W6T@171551|Porphyromonadaceae 976|Bacteroidetes T HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain covS - - - - - - - - - - - 4HB_MCP_1,HAMP,HATPase_c,HisKA,PAS BECNEDJF_02123 411477.PARMER_00900 2.31e-314 857.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMPG@200643|Bacteroidia,22W7G@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat BECNEDJF_02124 411477.PARMER_00899 6.56e-188 523.0 COG1360@1|root,COG1360@2|Bacteria,4NF2Y@976|Bacteroidetes,2FNVT@200643|Bacteroidia,22YDP@171551|Porphyromonadaceae 976|Bacteroidetes N OmpA family - - - ko:K02557 ko02030,ko02040,map02030,map02040 - - - ko00000,ko00001,ko02000,ko02035 1.A.30.1 - - OmpA BECNEDJF_02125 411477.PARMER_00898 2.19e-289 791.0 COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,2FP5F@200643|Bacteroidia,22W0X@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily - - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 BECNEDJF_02126 411477.PARMER_00897 0.0 965.0 COG1835@1|root,COG1835@2|Bacteria,4NRSG@976|Bacteroidetes,2G34Z@200643|Bacteroidia,22YUC@171551|Porphyromonadaceae 976|Bacteroidetes I Domain of unknown function (DUF4153) - - - - - - - - - - - - DUF4153 BECNEDJF_02127 1122931.AUAE01000017_gene4340 0.0 1113.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02128 1235803.C825_00288 0.0 1848.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02129 1235803.C825_00287 0.0 1385.0 COG0745@1|root,COG3292@1|root,COG5002@1|root,COG0745@2|Bacteria,COG3292@2|Bacteria,COG5002@2|Bacteria,4P0IA@976|Bacteroidetes,2FWSR@200643|Bacteroidia,231P1@171551|Porphyromonadaceae 976|Bacteroidetes T helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y BECNEDJF_02130 411477.PARMER_03016 0.0 1430.0 COG3250@1|root,COG3250@2|Bacteria,4NEDF@976|Bacteroidetes,2FMTQ@200643|Bacteroidia,231GS@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 2, TIM barrel domain - - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_02132 411477.PARMER_03017 0.0 1477.0 COG0475@1|root,COG0475@2|Bacteria,4NFPE@976|Bacteroidetes,2FN00@200643|Bacteroidia,22XDI@171551|Porphyromonadaceae 976|Bacteroidetes P Transporter, CPA2 family nhaS3 - - - - - - - - - - - Na_H_Exchanger BECNEDJF_02133 411477.PARMER_03019 0.0 1402.0 COG0296@1|root,COG0296@2|Bacteria,4NECZ@976|Bacteroidetes,2FMTG@200643|Bacteroidia,22W4H@171551|Porphyromonadaceae 976|Bacteroidetes G 1,4-alpha-glucan branching enzyme glgB - 2.4.1.18 ko:K00700 ko00500,ko01100,ko01110,map00500,map01100,map01110 M00565 R02110 - ko00000,ko00001,ko00002,ko01000,ko04147 - CBM48,GH13 - Alpha-amylase,Alpha-amylase_C,CBM_48 BECNEDJF_02134 411477.PARMER_03020 3.74e-242 664.0 COG1482@1|root,COG1482@2|Bacteria,4NF9A@976|Bacteroidetes,2FN4I@200643|Bacteroidia,22W94@171551|Porphyromonadaceae 976|Bacteroidetes G mannose-6-phosphate isomerase manA - 5.3.1.8 ko:K01809 ko00051,ko00520,ko01100,ko01110,ko01130,map00051,map00520,map01100,map01110,map01130 M00114 R01819 RC00376 ko00000,ko00001,ko00002,ko01000 - - - PMI_typeI BECNEDJF_02135 411477.PARMER_03021 0.0 1110.0 COG1472@1|root,COG1472@2|Bacteria,4NE90@976|Bacteroidetes,2FMV4@200643|Bacteroidia,22WDW@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 3 xyl3A_3 - 3.2.1.21 ko:K05349 ko00460,ko00500,ko00940,ko01100,ko01110,map00460,map00500,map00940,map01100,map01110 - R00026,R02558,R02887,R02985,R03527,R04949,R04998,R10035,R10039,R10040 RC00049,RC00059,RC00171,RC00262,RC00397,RC00451,RC00714,RC00746,RC01248 ko00000,ko00001,ko01000 - GH3 - Fn3-like,Glyco_hydro_3,Glyco_hydro_3_C,PA14 BECNEDJF_02136 411477.PARMER_01408 2.91e-104 301.0 2FH6B@1|root,3490R@2|Bacteria,4NSP7@976|Bacteroidetes,2FRZ3@200643|Bacteroidia,22YSE@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - BECNEDJF_02137 411477.PARMER_01407 1.42e-161 454.0 COG0811@1|root,COG0811@2|Bacteria,4NEA2@976|Bacteroidetes,2FMMQ@200643|Bacteroidia,22WD0@171551|Porphyromonadaceae 976|Bacteroidetes U MotA TolQ ExbB proton channel family protein exbB - - ko:K03561 - - - - ko00000,ko02000 1.A.30.2.1 - - MotA_ExbB BECNEDJF_02139 411477.PARMER_01405 4.17e-192 532.0 COG0084@1|root,COG0084@2|Bacteria,4NEVW@976|Bacteroidetes,2FMP9@200643|Bacteroidia,22XKP@171551|Porphyromonadaceae 976|Bacteroidetes L hydrolase, TatD tatD - - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase BECNEDJF_02140 411477.PARMER_01404 5.25e-233 641.0 COG0142@1|root,COG0142@2|Bacteria,4NEGQ@976|Bacteroidetes,2FPV5@200643|Bacteroidia,22VXB@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the FPP GGPP synthase family ispA - 2.5.1.1,2.5.1.10,2.5.1.29 ko:K13789 ko00900,ko01100,ko01110,ko01130,map00900,map01100,map01110,map01130 M00364,M00366 R01658,R02003,R02061 RC00279 ko00000,ko00001,ko00002,ko01000,ko01006 - - - polyprenyl_synt BECNEDJF_02141 411477.PARMER_04168 2.16e-241 673.0 28HN3@1|root,2Z7WH@2|Bacteria,4NK6U@976|Bacteroidetes,2FQZA@200643|Bacteroidia,22ZKA@171551|Porphyromonadaceae 976|Bacteroidetes S CRISPR-associated protein, Csd1 family csd1 - - ko:K19117 - - - - ko00000,ko02048 - - - Cas_Csd1 BECNEDJF_02142 411477.PARMER_04169 8.82e-207 572.0 COG3649@1|root,COG3649@2|Bacteria,4NNSG@976|Bacteroidetes,2FVKD@200643|Bacteroidia,22Z1R@171551|Porphyromonadaceae 976|Bacteroidetes L CRISPR-associated protein Cas7 - - - ko:K19115,ko:K19118 - - - - ko00000,ko02048 - - - Cas_Cas7 BECNEDJF_02143 411477.PARMER_04170 2.15e-165 461.0 COG1468@1|root,COG1468@2|Bacteria,4P2GQ@976|Bacteroidetes,2FMX4@200643|Bacteroidia,23079@171551|Porphyromonadaceae 976|Bacteroidetes L Domain of unknown function DUF83 cas4 - 3.1.12.1 ko:K07464 - - - - ko00000,ko01000,ko02048 - - - Cas_Cas4 BECNEDJF_02144 411477.PARMER_03451 2.36e-269 736.0 COG0438@1|root,COG0438@2|Bacteria,4NPUH@976|Bacteroidetes,2G2ST@200643|Bacteroidia 976|Bacteroidetes M Glycosyltransferase, group 1 family protein - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 BECNEDJF_02146 411477.PARMER_03453 2.92e-218 605.0 COG3274@1|root,COG3274@2|Bacteria,4NW0Q@976|Bacteroidetes,2FVBV@200643|Bacteroidia,22Z2B@171551|Porphyromonadaceae 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 BECNEDJF_02147 411477.PARMER_03454 3.2e-241 662.0 COG1216@1|root,COG1216@2|Bacteria,4P2IE@976|Bacteroidetes,2FTID@200643|Bacteroidia,230C1@171551|Porphyromonadaceae 976|Bacteroidetes S Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 BECNEDJF_02148 411477.PARMER_03457 1.81e-82 252.0 COG3594@1|root,COG3594@2|Bacteria 2|Bacteria G nodulation - - - ko:K13663 - - - - ko00000,ko01000 - - - Acyl_transf_3 BECNEDJF_02150 411477.PARMER_03459 0.0 937.0 COG2244@1|root,COG2244@2|Bacteria,4NEGZ@976|Bacteroidetes,2FNUG@200643|Bacteroidia,22WG6@171551|Porphyromonadaceae 976|Bacteroidetes S Polysaccharide biosynthesis protein - - - - - - - - - - - - MatE,Polysacc_synt BECNEDJF_02151 411477.PARMER_03460 6.71e-214 592.0 COG0438@1|root,COG0438@2|Bacteria,4NRN9@976|Bacteroidetes,2FSW0@200643|Bacteroidia,230EW@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferases group 1 - - - - - - - - - - - - Glyco_transf_4,Glycos_transf_1 BECNEDJF_02153 411477.PARMER_03462 7.07e-296 806.0 COG0677@1|root,COG0677@2|Bacteria,4NDTW@976|Bacteroidetes,2FMSD@200643|Bacteroidia,22WMZ@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the UDP-glucose GDP-mannose dehydrogenase family - - 1.1.1.336 ko:K02472 ko00520,ko05111,map00520,map05111 - R03317 RC00291 ko00000,ko00001,ko01000 - - - UDPG_MGDP_dh,UDPG_MGDP_dh_C,UDPG_MGDP_dh_N BECNEDJF_02154 411477.PARMER_03463 2.89e-252 691.0 COG2148@1|root,COG2148@2|Bacteria,4NFIA@976|Bacteroidetes,2FMUQ@200643|Bacteroidia,22XDG@171551|Porphyromonadaceae 976|Bacteroidetes M sugar transferase - - - - - - - - - - - - Bac_transf BECNEDJF_02157 411477.PARMER_03466 2.4e-169 473.0 COG4464@1|root,COG4464@2|Bacteria,4NMUT@976|Bacteroidetes,2FNRW@200643|Bacteroidia,22ZP9@171551|Porphyromonadaceae 976|Bacteroidetes GM COG COG4464 Capsular polysaccharide biosynthesis protein - - - - - - - - - - - - - BECNEDJF_02158 411477.PARMER_03467 0.0 1501.0 COG0489@1|root,COG3206@1|root,COG0489@2|Bacteria,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,2FM9K@200643|Bacteroidia,22X1F@171551|Porphyromonadaceae 976|Bacteroidetes DM Chain length determinant protein - - - - - - - - - - - - AAA_31,CbiA,GNVR,Wzz BECNEDJF_02159 411477.PARMER_03468 8.33e-184 511.0 COG1596@1|root,COG1596@2|Bacteria,4NNJT@976|Bacteroidetes,2FMYU@200643|Bacteroidia,22ZWH@171551|Porphyromonadaceae 976|Bacteroidetes M COG COG1596 Periplasmic protein involved in polysaccharide export - - - ko:K01991 ko02026,map02026 - - - ko00000,ko00001,ko02000 1.B.18 - - Poly_export,SLBB BECNEDJF_02160 411477.PARMER_03469 4.38e-130 369.0 COG0250@1|root,COG0250@2|Bacteria,4NUFS@976|Bacteroidetes,2FPHC@200643|Bacteroidia,22Y6K@171551|Porphyromonadaceae 976|Bacteroidetes K Transcription termination factor nusG - - - - - - - - - - - - NusG BECNEDJF_02162 411477.PARMER_03472 3.14e-295 805.0 COG4974@1|root,COG4974@2|Bacteria,4P01T@976|Bacteroidetes,2FNQ0@200643|Bacteroidia,22WIY@171551|Porphyromonadaceae 976|Bacteroidetes L COG NOG11942 non supervised orthologous group - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_02163 411477.PARMER_03473 1.1e-150 426.0 2DUMP@1|root,33RAQ@2|Bacteria,4P0F9@976|Bacteroidetes,2FR87@200643|Bacteroidia 411477.PARMER_03473|- S Psort location Cytoplasmic, score - - - - - - - - - - - - - BECNEDJF_02164 411477.PARMER_03538 9.82e-84 247.0 COG0776@1|root,COG0776@2|Bacteria,4PFPG@976|Bacteroidetes 976|Bacteroidetes L regulation of translation - - - - - - - - - - - - - BECNEDJF_02165 411477.PARMER_03537 0.0 1357.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FNU1@200643|Bacteroidia,2300D@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG26639 non supervised orthologous group - - - - - - - - - - - - DUF3874,VirE,VirE_N BECNEDJF_02166 411477.PARMER_00003 4.34e-40 146.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22W9I@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02167 411477.PARMER_00004 0.0 1381.0 COG0614@1|root,COG0614@2|Bacteria,4NEXQ@976|Bacteroidetes,2G2NN@200643|Bacteroidia,22XB6@171551|Porphyromonadaceae 976|Bacteroidetes P SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02168 411477.PARMER_00005 6.33e-116 333.0 COG1595@1|root,COG1595@2|Bacteria,4NTD3@976|Bacteroidetes,2G33X@200643|Bacteroidia 976|Bacteroidetes K Putative helix-turn-helix protein, YlxM / p13 like - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02169 411477.PARMER_03272 0.0 1794.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02170 411477.PARMER_04336 0.0 1267.0 COG2216@1|root,COG2216@2|Bacteria,4NFBI@976|Bacteroidetes,2FND6@200643|Bacteroidia,22VUY@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system kdpB - 3.6.3.12 ko:K01547 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - E1-E2_ATPase,Hydrolase BECNEDJF_02171 411477.PARMER_04335 6e-276 762.0 COG2060@1|root,COG2060@2|Bacteria,4NF2G@976|Bacteroidetes,2FP4S@200643|Bacteroidia,22WF2@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane kdpA GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0030955,GO:0031420,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043167,GO:0043169,GO:0043492,GO:0044464,GO:0046872,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0071944,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 ko:K01546 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - KdpA BECNEDJF_02173 411477.PARMER_03399 0.0 1048.0 COG1074@1|root,COG1074@2|Bacteria,4NEX4@976|Bacteroidetes,2FMHG@200643|Bacteroidia,22W5V@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the helicase family. UvrD subfamily addA - - - - - - - - - - - Cas_Cas4,PDDEXK_1,UvrD-helicase,UvrD_C BECNEDJF_02174 411477.PARMER_03398 1.51e-155 436.0 COG0688@1|root,COG0688@2|Bacteria,4NFU1@976|Bacteroidetes,2FMVT@200643|Bacteroidia,22W27@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer) psd - 4.1.1.65 ko:K01613 ko00564,ko01100,ko01110,map00564,map01100,map01110 M00093 R02055 RC00299 ko00000,ko00001,ko00002,ko01000 - - - PS_Dcarbxylase BECNEDJF_02175 999419.HMPREF1077_01935 2.04e-160 450.0 COG1183@1|root,COG1183@2|Bacteria,4NNUZ@976|Bacteroidetes,2FPNM@200643|Bacteroidia,22XNC@171551|Porphyromonadaceae 976|Bacteroidetes I Belongs to the CDP-alcohol phosphatidyltransferase class-I family pssA - 2.7.8.8 ko:K17103 ko00260,ko00564,ko01100,ko01110,map00260,map00564,map01100,map01110 M00093 R01800 RC00002,RC00017,RC02795 ko00000,ko00001,ko00002,ko01000 - - - CDP-OH_P_transf BECNEDJF_02176 999419.HMPREF1077_02896 3.91e-66 201.0 COG2076@1|root,COG2076@2|Bacteria,4NQ4U@976|Bacteroidetes,2FU4E@200643|Bacteroidia,231QH@171551|Porphyromonadaceae 976|Bacteroidetes P Small Multidrug Resistance protein - - - ko:K11741 - - - - ko00000,ko02000 2.A.7.1 - - Multi_Drug_Res BECNEDJF_02177 411477.PARMER_01747 0.0 1632.0 COG0308@1|root,COG0308@2|Bacteria,4NGTZ@976|Bacteroidetes,2FQE9@200643|Bacteroidia,22X2F@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase family M1 domain pepN - 3.4.11.2 ko:K01256 ko00480,ko01100,map00480,map01100 - R00899,R04951 RC00096,RC00141 ko00000,ko00001,ko01000,ko01002 - - - ERAP1_C,Peptidase_M1 BECNEDJF_02178 411477.PARMER_03993 1.09e-130 371.0 COG0503@1|root,COG0503@2|Bacteria,4NEP0@976|Bacteroidetes,2FP5S@200643|Bacteroidia,22W2M@171551|Porphyromonadaceae 976|Bacteroidetes F Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis xpt - 2.4.2.22 ko:K03816 ko00230,ko01100,ko01110,map00230,map01100,map01110 - R01229,R02142 RC00063,RC00122 ko00000,ko00001,ko01000 - - - Pribosyltran BECNEDJF_02179 411477.PARMER_03994 3.28e-312 852.0 COG2233@1|root,COG2233@2|Bacteria,4NG6D@976|Bacteroidetes,2FMKN@200643|Bacteroidia,22XBV@171551|Porphyromonadaceae 976|Bacteroidetes F Permease family pbuX - - ko:K16345 - - - - ko00000,ko02000 2.A.40.4.2 - - Xan_ur_permease BECNEDJF_02180 411477.PARMER_03995 0.0 1258.0 COG1408@1|root,COG3568@1|root,COG1408@2|Bacteria,COG3568@2|Bacteria,4NEIF@976|Bacteroidetes,2FMWV@200643|Bacteroidia,22XIF@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos,Metallophos,Pur_ac_phosph_N BECNEDJF_02181 411477.PARMER_03996 5.38e-250 685.0 COG2008@1|root,COG2008@2|Bacteria,4NEIH@976|Bacteroidetes,2FPGW@200643|Bacteroidia,22WFE@171551|Porphyromonadaceae 976|Bacteroidetes E Threonine aldolase ltaE - 4.1.2.48 ko:K01620 ko00260,ko01100,ko01110,ko01120,ko01130,ko01230,map00260,map01100,map01110,map01120,map01130,map01230 - R00751,R06171 RC00312,RC00372 ko00000,ko00001,ko01000 - - - Beta_elim_lyase BECNEDJF_02182 411477.PARMER_03997 2.63e-115 330.0 COG1595@1|root,COG1595@2|Bacteria,4NMM3@976|Bacteroidetes,2FNH5@200643|Bacteroidia,22XTV@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02183 411477.PARMER_03998 0.0 885.0 COG1030@1|root,COG1030@2|Bacteria,4NGGV@976|Bacteroidetes,2FP4N@200643|Bacteroidia,22X22@171551|Porphyromonadaceae 976|Bacteroidetes O serine protease - - - ko:K07403 - - - - ko00000 - - - NfeD,Peptidase_S49,SDH_sah BECNEDJF_02184 411477.PARMER_03999 1.25e-150 423.0 COG2865@1|root,COG2865@2|Bacteria,4NGPG@976|Bacteroidetes,2FMWB@200643|Bacteroidia,22XSV@171551|Porphyromonadaceae 976|Bacteroidetes K Putative DNA-binding domain - - - - - - - - - - - - AlbA_2 BECNEDJF_02185 411477.PARMER_04000 0.0 1399.0 COG0475@1|root,COG0490@1|root,COG0475@2|Bacteria,COG0490@2|Bacteria,4NGF6@976|Bacteroidetes,2FNTX@200643|Bacteroidia,22WU6@171551|Porphyromonadaceae 976|Bacteroidetes P COG0475 Kef-type K transport systems, membrane components - - - ko:K03455 - - - - ko00000 2.A.37 - - Na_H_Exchanger,TrkA_C BECNEDJF_02186 411477.PARMER_04001 1.29e-190 528.0 COG1212@1|root,COG1212@2|Bacteria,4NG4B@976|Bacteroidetes,2FMHD@200643|Bacteroidia,22XG8@171551|Porphyromonadaceae 976|Bacteroidetes M Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria kdsB - 2.7.7.38 ko:K00979 ko00540,ko01100,map00540,map01100 M00063 R03351,R11396 RC00152,RC00910 ko00000,ko00001,ko00002,ko01000,ko01005 - - - CTP_transf_3 BECNEDJF_02187 411477.PARMER_04002 0.0 1224.0 COG0706@1|root,COG0706@2|Bacteria,4NESJ@976|Bacteroidetes,2FN3A@200643|Bacteroidia,22WA9@171551|Porphyromonadaceae 976|Bacteroidetes U Required for the insertion and or proper folding and or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins yidC - - ko:K03217 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044,ko03029 2.A.9 - - 60KD_IMP,YidC_periplas BECNEDJF_02188 411477.PARMER_04003 0.0 1077.0 COG0504@1|root,COG0504@2|Bacteria,4NEWT@976|Bacteroidetes,2FMC4@200643|Bacteroidia,22XB9@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates pyrG - 6.3.4.2 ko:K01937 ko00240,ko01100,map00240,map01100 M00052 R00571,R00573 RC00010,RC00074 ko00000,ko00001,ko00002,ko01000 - - - CTP_synth_N,GATase BECNEDJF_02191 411477.PARMER_04008 7.78e-114 327.0 COG3247@1|root,COG3247@2|Bacteria,4NTTU@976|Bacteroidetes,2FP3S@200643|Bacteroidia,22YEM@171551|Porphyromonadaceae 976|Bacteroidetes S Short repeat of unknown function (DUF308) - - - - - - - - - - - - DUF308 BECNEDJF_02192 411477.PARMER_04009 4.58e-216 596.0 COG2207@1|root,COG2207@2|Bacteria,4NQI6@976|Bacteroidetes,2FU41@200643|Bacteroidia 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 BECNEDJF_02193 411477.PARMER_04010 3.44e-139 394.0 COG1309@1|root,COG1309@2|Bacteria,4NQ99@976|Bacteroidetes,2FMT3@200643|Bacteroidia,22YJI@171551|Porphyromonadaceae 976|Bacteroidetes K Bacterial regulatory proteins, tetR family - - - - - - - - - - - - TetR_N BECNEDJF_02194 411477.PARMER_01605 6.47e-214 591.0 2FA05@1|root,347QT@2|Bacteria,4P5V6@976|Bacteroidetes,2FYSR@200643|Bacteroidia,230WN@171551|Porphyromonadaceae 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - - - - - - - - - - - - Mfa2 BECNEDJF_02196 411477.PARMER_01124 3.1e-148 425.0 COG0104@1|root,COG0104@2|Bacteria,4NGRZ@976|Bacteroidetes,2FM8A@200643|Bacteroidia,22VVC@171551|Porphyromonadaceae 976|Bacteroidetes F Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP purA GO:0003674,GO:0003824,GO:0004019,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006163,GO:0006164,GO:0006167,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009117,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009150,GO:0009152,GO:0009156,GO:0009161,GO:0009165,GO:0009167,GO:0009168,GO:0009259,GO:0009260,GO:0009987,GO:0016874,GO:0016879,GO:0017144,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0034641,GO:0034654,GO:0044208,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046033,GO:0046040,GO:0046390,GO:0046483,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 6.3.4.4 ko:K01939 ko00230,ko00250,ko01100,map00230,map00250,map01100 M00049 R01135 RC00458,RC00459 ko00000,ko00001,ko00002,ko01000 - - - Adenylsucc_synt BECNEDJF_02197 411477.PARMER_01123 1.13e-154 435.0 COG2738@1|root,COG2738@2|Bacteria,4NDWG@976|Bacteroidetes,2FPBQ@200643|Bacteroidia,22WK7@171551|Porphyromonadaceae 976|Bacteroidetes S Putative neutral zinc metallopeptidase - - - ko:K06973 - - - - ko00000 - - - Zn_peptidase_2 BECNEDJF_02198 411477.PARMER_01122 0.0 877.0 COG0124@1|root,COG0124@2|Bacteria,4NE8N@976|Bacteroidetes,2FM6I@200643|Bacteroidia,22X5W@171551|Porphyromonadaceae 976|Bacteroidetes J histidyl-tRNA synthetase hisS - 6.1.1.21 ko:K01892 ko00970,map00970 M00359,M00360 R03655 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - HGTP_anticodon,tRNA-synt_His BECNEDJF_02199 411477.PARMER_01120 1.18e-55 173.0 COG0234@1|root,COG0234@2|Bacteria,4NS7D@976|Bacteroidetes,2FT5R@200643|Bacteroidia,22YDR@171551|Porphyromonadaceae 976|Bacteroidetes O Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter groS GO:0003674,GO:0005488,GO:0005515,GO:0006457,GO:0006458,GO:0006950,GO:0006986,GO:0008150,GO:0009987,GO:0010033,GO:0035966,GO:0042221,GO:0043167,GO:0043169,GO:0046872,GO:0050896,GO:0051082,GO:0051084,GO:0051085,GO:0051087,GO:0061077 - ko:K04078 - - - - ko00000,ko03029,ko03110 - - - Cpn10 BECNEDJF_02200 411477.PARMER_01119 0.0 1032.0 COG0459@1|root,COG0459@2|Bacteria,4NDZM@976|Bacteroidetes,2FMH4@200643|Bacteroidia,22WR5@171551|Porphyromonadaceae 976|Bacteroidetes O Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions groL GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006457,GO:0006458,GO:0008150,GO:0009987,GO:0016465,GO:0032991,GO:0044183,GO:0044424,GO:0044444,GO:0044445,GO:0044464,GO:0051082,GO:0061077,GO:0101031,GO:1990220 - ko:K04077 ko03018,ko04212,ko04940,ko05134,ko05152,map03018,map04212,map04940,map05134,map05152 - - - ko00000,ko00001,ko03019,ko03029,ko03110,ko04147 - - - Cpn60_TCP1 BECNEDJF_02202 411477.PARMER_01116 2.13e-130 370.0 COG1595@1|root,COG1595@2|Bacteria,4NMC0@976|Bacteroidetes,2FP0F@200643|Bacteroidia,22XPS@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02203 411477.PARMER_01115 2.3e-83 246.0 2EHRC@1|root,33BH4@2|Bacteria,4NXIE@976|Bacteroidetes,2FTGM@200643|Bacteroidia,22YXC@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23405 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_02204 411477.PARMER_01114 1.62e-105 305.0 2ER5W@1|root,33IRG@2|Bacteria,4NYCS@976|Bacteroidetes,2FS7R@200643|Bacteroidia,231E6@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG28735 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_02205 411477.PARMER_01113 2.58e-196 545.0 COG1694@1|root,COG3956@2|Bacteria,4NEA3@976|Bacteroidetes,2FKYP@200643|Bacteroidia,22WH1@171551|Porphyromonadaceae 976|Bacteroidetes S COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like mazG - 3.6.1.66 ko:K02428 ko00230,map00230 - R00426,R00720,R01855,R02100,R02720,R03531 RC00002 ko00000,ko00001,ko01000 - - - MazG BECNEDJF_02206 411477.PARMER_01112 0.0 1357.0 COG4232@1|root,COG4232@2|Bacteria,4NEW6@976|Bacteroidetes,2FNDE@200643|Bacteroidia,22WS5@171551|Porphyromonadaceae 976|Bacteroidetes CO Thiol disulfide interchange protein - - 1.8.1.8 ko:K04084 - - - - ko00000,ko01000,ko03110 5.A.1.1 - - DsbC,DsbD,Thioredoxin_7 BECNEDJF_02207 411477.PARMER_01111 2.02e-215 595.0 COG0564@1|root,COG0564@2|Bacteria,4NHCT@976|Bacteroidetes,2FNNK@200643|Bacteroidia,22W6X@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the pseudouridine synthase RluA family rluD - 5.4.99.23 ko:K06180 - - - - ko00000,ko01000,ko03009 - - - PseudoU_synth_2,S4 BECNEDJF_02208 411477.PARMER_01109 0.0 917.0 COG0526@1|root,COG0526@2|Bacteria,4NGCC@976|Bacteroidetes,2FNK1@200643|Bacteroidia 976|Bacteroidetes CO Thioredoxin-like - - - - - - - - - - - - DUF4369,Redoxin,Thioredoxin_8 BECNEDJF_02209 411477.PARMER_01108 0.0 1730.0 COG2373@1|root,COG2373@2|Bacteria,4NG2S@976|Bacteroidetes,2FPX1@200643|Bacteroidia,22Z3N@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent Receptor Plug Domain - - - - - - - - - - - - - BECNEDJF_02213 411477.PARMER_03732 9.78e-107 309.0 COG0049@1|root,COG0049@2|Bacteria,4NEEM@976|Bacteroidetes,2FNKP@200643|Bacteroidia,22WEA@171551|Porphyromonadaceae 976|Bacteroidetes J One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA rpsG GO:0000028,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0016043,GO:0019538,GO:0019843,GO:0022607,GO:0022613,GO:0022618,GO:0022626,GO:0022627,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0042254,GO:0042255,GO:0042274,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02992 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S7 BECNEDJF_02214 411477.PARMER_03731 1.52e-89 263.0 COG0048@1|root,COG0048@2|Bacteria,4NM3Y@976|Bacteroidetes,2FRY7@200643|Bacteroidia,22XMF@171551|Porphyromonadaceae 976|Bacteroidetes J Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit rpsL GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02950 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosom_S12_S23 BECNEDJF_02215 411477.PARMER_03729 0.0 1216.0 COG0323@1|root,COG0323@2|Bacteria,4NDWJ@976|Bacteroidetes,2FMIK@200643|Bacteroidia,22X0H@171551|Porphyromonadaceae 976|Bacteroidetes L This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex mutL GO:0003674,GO:0003676,GO:0003677,GO:0003697,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006259,GO:0006281,GO:0006298,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008150,GO:0008152,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0032300,GO:0032991,GO:0033554,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1990391 - ko:K03572 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - DNA_mis_repair,HATPase_c_3,MutL_C BECNEDJF_02216 999419.HMPREF1077_02228 1.18e-66 202.0 2EH2Q@1|root,33AUP@2|Bacteria,4NXI6@976|Bacteroidetes,2FT92@200643|Bacteroidia,22YX5@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG23401 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_02217 999419.HMPREF1077_02227 0.0 1088.0 COG1934@1|root,COG1934@2|Bacteria,4PKT4@976|Bacteroidetes,2G3HG@200643|Bacteroidia,22W2I@171551|Porphyromonadaceae 976|Bacteroidetes S OstA-like protein - - - - - - - - - - - - OstA_2 BECNEDJF_02218 411477.PARMER_03726 0.0 865.0 COG0760@1|root,COG0760@2|Bacteria,4NEW0@976|Bacteroidetes,2FMDU@200643|Bacteroidia,22WD3@171551|Porphyromonadaceae 976|Bacteroidetes M peptidylprolyl isomerase surA - 5.2.1.8 ko:K03771 - - - - ko00000,ko01000,ko03110 - - - Rotamase,SurA_N_3 BECNEDJF_02219 999419.HMPREF1077_02225 5.43e-195 541.0 COG0760@1|root,COG0760@2|Bacteria,4NG2P@976|Bacteroidetes,2FMWD@200643|Bacteroidia,22XXI@171551|Porphyromonadaceae 976|Bacteroidetes O COG NOG23400 non supervised orthologous group - - - - - - - - - - - - Rotamase_2 BECNEDJF_02220 411477.PARMER_03724 0.0 1042.0 COG0760@1|root,COG0760@2|Bacteria,4NGIR@976|Bacteroidetes,2FNS9@200643|Bacteroidia,22VWY@171551|Porphyromonadaceae 976|Bacteroidetes M peptidylprolyl isomerase - - 5.2.1.8 ko:K03771 - - - - ko00000,ko01000,ko03110 - - - Rotamase,Rotamase_2,Rotamase_3 BECNEDJF_02221 435591.BDI_2393 6.83e-05 47.8 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,2FMKX@200643|Bacteroidia,22VX7@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate- limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth guaB - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH BECNEDJF_02222 411477.PARMER_03719 0.0 1412.0 COG0514@1|root,COG0514@2|Bacteria,4NEB4@976|Bacteroidetes,2FMBR@200643|Bacteroidia,22WPI@171551|Porphyromonadaceae 976|Bacteroidetes L ATP-dependent DNA helicase RecQ recQ - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,HRDC,Helicase_C,RQC,RecQ_Zn_bind BECNEDJF_02223 999419.HMPREF1077_02221 1.94e-287 786.0 COG1219@1|root,COG1219@2|Bacteria,4NE1B@976|Bacteroidetes,2FMQV@200643|Bacteroidia,22W68@171551|Porphyromonadaceae 976|Bacteroidetes O ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP clpX GO:0000166,GO:0003674,GO:0003824,GO:0004176,GO:0005488,GO:0005524,GO:0006508,GO:0006807,GO:0008144,GO:0008150,GO:0008152,GO:0008233,GO:0009056,GO:0009057,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019538,GO:0030163,GO:0030554,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042623,GO:0043167,GO:0043168,GO:0043170,GO:0044238,GO:0051301,GO:0070011,GO:0071704,GO:0097159,GO:0097367,GO:0140096,GO:1901265,GO:1901363,GO:1901564,GO:1901565,GO:1901575 - ko:K03544 ko04112,map04112 - - - ko00000,ko00001,ko03110 - - - AAA_2,ClpB_D2-small,zf-C4_ClpX BECNEDJF_02224 411477.PARMER_03717 4.67e-155 435.0 COG0740@1|root,COG0740@2|Bacteria,4NE20@976|Bacteroidetes,2FN8E@200643|Bacteroidia,22W88@171551|Porphyromonadaceae 976|Bacteroidetes O Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins clpP - 3.4.21.92 ko:K01358 ko04112,ko04212,map04112,map04212 - - - ko00000,ko00001,ko01000,ko01002 - - - CLP_protease BECNEDJF_02225 411477.PARMER_03715 2.59e-311 850.0 COG0544@1|root,COG0544@2|Bacteria,4NE99@976|Bacteroidetes,2FM7B@200643|Bacteroidia,22WV0@171551|Porphyromonadaceae 976|Bacteroidetes O Trigger factor tig - - ko:K03545 - - - - ko00000 - - - Trigger_C,Trigger_N BECNEDJF_02226 411477.PARMER_03714 9.22e-49 155.0 COG0724@1|root,COG0724@2|Bacteria,4NSXX@976|Bacteroidetes,2FUB9@200643|Bacteroidia,22YK3@171551|Porphyromonadaceae 976|Bacteroidetes S RNA recognition motif - - - - - - - - - - - - RRM_1 BECNEDJF_02227 411477.PARMER_03713 8.38e-208 575.0 COG1266@1|root,COG1266@2|Bacteria,4NHE1@976|Bacteroidetes,2FT47@200643|Bacteroidia,22YC2@171551|Porphyromonadaceae 976|Bacteroidetes S CAAX protease self-immunity - - - ko:K07052 - - - - ko00000 - - - Abi BECNEDJF_02228 411477.PARMER_03712 1.14e-177 495.0 COG1137@1|root,COG1137@2|Bacteria,4NDUG@976|Bacteroidetes,2FKZE@200643|Bacteroidia,22XAY@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter lptB - - ko:K06861 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko01000,ko02000 1.B.42.1 - - ABC_tran,BCA_ABC_TP_C BECNEDJF_02230 411477.PARMER_01853 3.48e-239 659.0 COG0039@1|root,COG0039@2|Bacteria,4NEJ7@976|Bacteroidetes,2FNZ4@200643|Bacteroidia,22VZT@171551|Porphyromonadaceae 976|Bacteroidetes C Belongs to the LDH MDH superfamily mdh - 1.1.1.37 ko:K00024 ko00020,ko00270,ko00620,ko00630,ko00680,ko00710,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00020,map00270,map00620,map00630,map00680,map00710,map00720,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00012,M00168,M00173,M00346,M00374,M00620,M00740 R00342,R07136 RC00031 ko00000,ko00001,ko00002,ko01000 - - - Ldh_1_C,Ldh_1_N BECNEDJF_02231 411477.PARMER_02131 0.0 929.0 COG1139@1|root,COG1139@2|Bacteria,4NEBT@976|Bacteroidetes,2FP2X@200643|Bacteroidia,22W4D@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S ferredoxin - - - ko:K18929 - - - - ko00000 - - - DUF3390,Fer4_8,LUD_dom BECNEDJF_02232 411477.PARMER_02132 8.09e-182 505.0 COG0247@1|root,COG0247@2|Bacteria,4NIMP@976|Bacteroidetes,2FN40@200643|Bacteroidia,22WPM@171551|Porphyromonadaceae 976|Bacteroidetes C Fe-S oxidoreductase - - - ko:K18928 - - - - ko00000 - - - CCG BECNEDJF_02233 411477.PARMER_02133 5.68e-228 657.0 COG0458@1|root,COG0458@2|Bacteria,4NEQ0@976|Bacteroidetes,2FMKD@200643|Bacteroidia,22W4Y@171551|Porphyromonadaceae 976|Bacteroidetes EF Carbamoyl-phosphate synthase (glutamine-hydrolyzing) carB - 6.3.5.5 ko:K01955 ko00240,ko00250,ko01100,map00240,map00250,map01100 M00051 R00256,R00575,R01395,R10948,R10949 RC00002,RC00010,RC00043,RC02750,RC02798,RC03314 ko00000,ko00001,ko00002,ko01000 - - - CPSase_L_D2,CPSase_L_D3,MGS BECNEDJF_02234 411477.PARMER_00246 0.0 910.0 COG1508@1|root,COG1508@2|Bacteria,4NE5B@976|Bacteroidetes,2FM52@200643|Bacteroidia,22VUP@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma54 factor rpoN - - ko:K03092 ko02020,ko05111,map02020,map05111 - - - ko00000,ko00001,ko03021 - - - Sigma54_AID,Sigma54_CBD,Sigma54_DBD BECNEDJF_02235 999419.HMPREF1077_01705 1.19e-136 387.0 COG0671@1|root,COG0671@2|Bacteria,4NPUG@976|Bacteroidetes,2FSUS@200643|Bacteroidia,22YR5@171551|Porphyromonadaceae 976|Bacteroidetes I Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - PAP2 BECNEDJF_02236 411477.PARMER_00767 6e-161 452.0 COG0603@1|root,COG0603@2|Bacteria,4NGCY@976|Bacteroidetes,2FM6W@200643|Bacteroidia,22X8P@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)) queC - 6.3.4.20 ko:K06920 ko00790,ko01100,map00790,map01100 - R09978 RC00959 ko00000,ko00001,ko01000,ko03016 - - - QueC BECNEDJF_02237 411477.PARMER_00766 6.39e-116 331.0 COG0780@1|root,COG0780@2|Bacteria,4NMSC@976|Bacteroidetes,2FP7K@200643|Bacteroidia,22XP3@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) queF - 1.7.1.13 ko:K09457 ko00790,ko01100,map00790,map01100 - R07605 RC01875 ko00000,ko00001,ko01000,ko03016 - - - QueF BECNEDJF_02238 411477.PARMER_00765 8.45e-195 539.0 COG2133@1|root,COG2133@2|Bacteria,4NGMS@976|Bacteroidetes,2FQQN@200643|Bacteroidia,231G5@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 BECNEDJF_02239 411477.PARMER_00764 2.17e-123 367.0 COG2812@1|root,COG2812@2|Bacteria,4NE8A@976|Bacteroidetes,2FN52@200643|Bacteroidia,22W32@171551|Porphyromonadaceae 976|Bacteroidetes H DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity dnaX - 2.7.7.7 ko:K02343 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta2,DNA_pol3_gamma3 BECNEDJF_02240 411477.PARMER_02486 4.06e-289 788.0 COG3637@1|root,COG3637@2|Bacteria,4NGSV@976|Bacteroidetes,2FQ5B@200643|Bacteroidia,22ZMW@171551|Porphyromonadaceae 976|Bacteroidetes M Phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P BECNEDJF_02241 411477.PARMER_02484 5.89e-258 706.0 2DWGN@1|root,3408J@2|Bacteria,4P42X@976|Bacteroidetes,2FYH1@200643|Bacteroidia,2316Z@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - DUF4852 BECNEDJF_02242 411477.PARMER_02483 2.08e-101 296.0 COG3294@1|root,COG3294@2|Bacteria,4NJAE@976|Bacteroidetes,2FNKA@200643|Bacteroidia,22WQF@171551|Porphyromonadaceae 976|Bacteroidetes S Metal dependent phosphohydrolases with conserved 'HD' motif. - - - - - - - - - - - - HD BECNEDJF_02244 411477.PARMER_00841 0.0 938.0 COG0673@1|root,COG0673@2|Bacteria,4NG5T@976|Bacteroidetes,2FPA2@200643|Bacteroidia,22X70@171551|Porphyromonadaceae 976|Bacteroidetes S Putative oxidoreductase C terminal domain - - - - - - - - - - - - GFO_IDH_MocA,Oxidoreduct_C BECNEDJF_02246 411477.PARMER_03223 2.53e-76 231.0 COG1595@1|root,COG1595@2|Bacteria,4NNBY@976|Bacteroidetes,2FXHP@200643|Bacteroidia 976|Bacteroidetes K Sigma-70, region 4 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02247 1122931.AUAE01000011_gene1750 6.99e-56 183.0 2CC7R@1|root,334IS@2|Bacteria,4NX6W@976|Bacteroidetes,2FVDG@200643|Bacteroidia,231B8@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4469) with IG-like fold - - - - - - - - - - - - DUF4469,HU-DNA_bdg BECNEDJF_02249 411477.PARMER_03835 2.93e-107 309.0 COG2030@1|root,COG2030@2|Bacteria,4NNHH@976|Bacteroidetes,2FP51@200643|Bacteroidia,22XZN@171551|Porphyromonadaceae 976|Bacteroidetes I MaoC like domain nodN - - - - - - - - - - - MaoC_dehydratas BECNEDJF_02250 411477.PARMER_03834 2.32e-145 410.0 COG3187@1|root,COG3187@2|Bacteria,4NWRF@976|Bacteroidetes,2FNPG@200643|Bacteroidia,22XMT@171551|Porphyromonadaceae 976|Bacteroidetes O lipoprotein NlpE involved in copper resistance - - - - - - - - - - - - - BECNEDJF_02251 411477.PARMER_03833 4.49e-183 509.0 COG1573@1|root,COG1573@2|Bacteria,4NECP@976|Bacteroidetes,2FMJ6@200643|Bacteroidia,22W06@171551|Porphyromonadaceae 976|Bacteroidetes L DNA metabolism protein - - - - - - - - - - - - DUF4130 BECNEDJF_02252 411477.PARMER_03832 2.1e-143 413.0 COG4277@1|root,COG4277@2|Bacteria,4NEI2@976|Bacteroidetes,2FNIC@200643|Bacteroidia,22WK1@171551|Porphyromonadaceae 976|Bacteroidetes S Radical SAM - - - - - - - - - - - - HHH_3,Radical_SAM BECNEDJF_02255 411477.PARMER_03970 1.17e-215 595.0 COG0324@1|root,COG0324@2|Bacteria,4NFJY@976|Bacteroidetes,2FM0H@200643|Bacteroidia,22W45@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) miaA2 GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 2.5.1.75 ko:K00791 ko00908,ko01100,ko01110,map00908,map01100,map01110 - R01122 RC02820 ko00000,ko00001,ko01000,ko01006,ko03016 - - - IPPT BECNEDJF_02256 411477.PARMER_03971 1.83e-189 526.0 COG2877@1|root,COG2877@2|Bacteria,4NENN@976|Bacteroidetes,2FN47@200643|Bacteroidia,22WRG@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the KdsA family kdsA - 2.5.1.55 ko:K01627 ko00540,ko01100,map00540,map01100 M00063 R03254 RC00435 ko00000,ko00001,ko00002,ko01000,ko01005 - - - DAHP_synth_1 BECNEDJF_02257 411477.PARMER_03972 3.65e-158 444.0 COG0664@1|root,COG0664@2|Bacteria,4NFB1@976|Bacteroidetes,2FNHP@200643|Bacteroidia,22WXA@171551|Porphyromonadaceae 976|Bacteroidetes K Crp Fnr family - - - ko:K21556 - - - - ko00000,ko03000 - - - HTH_Crp_2,cNMP_binding BECNEDJF_02260 411477.PARMER_00689 2.15e-191 530.0 COG2755@1|root,COG2755@2|Bacteria,4NMUB@976|Bacteroidetes,2FQW2@200643|Bacteroidia,22ZWG@171551|Porphyromonadaceae 976|Bacteroidetes E GDSL-like Lipase/Acylhydrolase - - - - - - - - - - - - Lipase_GDSL_2 BECNEDJF_02261 411477.PARMER_00688 5.79e-215 593.0 COG1052@1|root,COG1052@2|Bacteria,4NJGJ@976|Bacteroidetes,2FPFB@200643|Bacteroidia,22XF1@171551|Porphyromonadaceae 976|Bacteroidetes CH D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain - - - - - - - - - - - - 2-Hacid_dh,2-Hacid_dh_C BECNEDJF_02262 411477.PARMER_00686 1.91e-187 522.0 COG1712@1|root,COG1712@2|Bacteria,4NIWN@976|Bacteroidetes,2FP19@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function DUF108 nadX - 1.4.1.21 ko:K06989 ko00760,ko01100,map00760,map01100 - R07407,R07410 RC02566 ko00000,ko00001,ko01000 - - - DUF108,NAD_binding_3 BECNEDJF_02263 411477.PARMER_01709 4.42e-133 381.0 COG0010@1|root,COG0010@2|Bacteria,4NE26@976|Bacteroidetes,2FU2Y@200643|Bacteroidia,22YZP@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the arginase family rocF - 3.5.3.1,3.5.3.11 ko:K01476,ko:K01480 ko00220,ko00330,ko01100,ko01110,ko01130,ko01230,ko05146,map00220,map00330,map01100,map01110,map01130,map01230,map05146 M00029,M00133,M00134 R00551,R01157 RC00024,RC00329 ko00000,ko00001,ko00002,ko01000 - - - Arginase BECNEDJF_02265 411477.PARMER_01710 0.0 1557.0 COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,2G3E0@200643|Bacteroidia,22WAV@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein, OMP85 family - - - - - - - - - - - - Bac_surface_Ag BECNEDJF_02266 411479.BACUNI_00050 0.0 1879.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM37@200643|Bacteroidia,4AKK0@815|Bacteroidaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02267 411477.PARMER_02194 1.26e-245 676.0 COG0795@1|root,COG0795@2|Bacteria,4NF8Y@976|Bacteroidetes,2FM2K@200643|Bacteroidia,22WPG@171551|Porphyromonadaceae 976|Bacteroidetes S Permease, YjgP YjgQ family lptG - - ko:K11720 ko02010,map02010 M00320 - - ko00000,ko00001,ko00002,ko02000 1.B.42.1 - - YjgP_YjgQ BECNEDJF_02268 411477.PARMER_02193 1.15e-285 778.0 COG0343@1|root,COG0343@2|Bacteria,4NE15@976|Bacteroidetes,2FMUM@200643|Bacteroidia,22VYI@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the product. After dissociation, two additional enzymatic reactions on the tRNA convert PreQ1 to queuine (Q), resulting in the hypermodified nucleoside queuosine (7-(((4,5-cis-dihydroxy-2- cyclopenten-1-yl)amino)methyl)-7-deazaguanosine) tgt - 2.4.2.29 ko:K00773 - - R03789,R10209 RC00063 ko00000,ko01000,ko03016 - - - TGT BECNEDJF_02269 411477.PARMER_02192 0.0 1004.0 COG0348@1|root,COG1143@1|root,COG0348@2|Bacteria,COG1143@2|Bacteria,4NHSX@976|Bacteroidetes,2FN5F@200643|Bacteroidia,22W4S@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S binding domain - - - - - - - - - - - - Fer4,Fer4_5,Fer4_7,Fer4_9 BECNEDJF_02270 411477.PARMER_02191 5e-224 617.0 COG2006@1|root,COG2006@2|Bacteria,4NH1F@976|Bacteroidetes,2FP1X@200643|Bacteroidia,22X7D@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF362) - - - - - - - - - - - - DUF362,TAT_signal BECNEDJF_02272 411477.PARMER_02189 6.27e-293 798.0 COG0138@1|root,COG0138@2|Bacteria,4NIY8@976|Bacteroidetes,2FMYP@200643|Bacteroidia,22ZIN@171551|Porphyromonadaceae 976|Bacteroidetes F AICARFT/IMPCHase bienzyme purH2 - 2.1.2.3,3.5.4.10 ko:K00602 ko00230,ko00670,ko01100,ko01110,ko01130,ko01523,map00230,map00670,map01100,map01110,map01130,map01523 M00048 R01127,R04560 RC00026,RC00263,RC00456 ko00000,ko00001,ko00002,ko01000,ko04147 - - - AICARFT_IMPCHas BECNEDJF_02273 411477.PARMER_02188 2.19e-120 343.0 COG1443@1|root,COG1443@2|Bacteria,4NJUP@976|Bacteroidetes,2FNMR@200643|Bacteroidia,22XUF@171551|Porphyromonadaceae 976|Bacteroidetes I NUDIX domain - - - - - - - - - - - - IspA,NUDIX BECNEDJF_02274 411477.PARMER_02186 0.0 1370.0 COG0550@1|root,COG0550@2|Bacteria,4NE6R@976|Bacteroidetes,2FN9D@200643|Bacteroidia,22W25@171551|Porphyromonadaceae 976|Bacteroidetes L DNA topoisomerase III topB - 5.99.1.2 ko:K03169 - - - - ko00000,ko01000,ko03032 - - - Topoisom_bac,Toprim BECNEDJF_02275 411477.PARMER_02184 1.68e-131 372.0 COG0558@1|root,COG0558@2|Bacteria,4NNTN@976|Bacteroidetes 976|Bacteroidetes I Domain of unknown function (DUF4833) - - - - - - - - - - - - DUF4833 BECNEDJF_02276 411477.PARMER_02183 9.79e-184 511.0 COG0287@1|root,COG0287@2|Bacteria,4NIUC@976|Bacteroidetes,2FMD4@200643|Bacteroidia,22W24@171551|Porphyromonadaceae 976|Bacteroidetes E Prephenate dehydrogenase tyrA - 1.3.1.12 ko:K00210 ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 M00025 R01728 RC00125 ko00000,ko00001,ko00002,ko01000 - - - PDH BECNEDJF_02277 411477.PARMER_02182 2.7e-258 707.0 COG1605@1|root,COG2876@1|root,COG1605@2|Bacteria,COG2876@2|Bacteria,4NDU4@976|Bacteroidetes,2FPF1@200643|Bacteroidia,22WB4@171551|Porphyromonadaceae 976|Bacteroidetes E Cytochrome C4 pheB - 5.4.99.5 ko:K04516 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024,M00025 R01715 RC03116 ko00000,ko00001,ko00002,ko01000 - - - CM_2,DAHP_synth_1 BECNEDJF_02278 411477.PARMER_02181 2.05e-300 817.0 COG0436@1|root,COG0436@2|Bacteria,4NF2E@976|Bacteroidetes,2FN0N@200643|Bacteroidia,22X91@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II dapL - 2.6.1.83 ko:K10206,ko:K14261 ko00300,ko01100,ko01110,ko01130,ko01230,map00300,map01100,map01110,map01130,map01230 M00527 R07613 RC00006,RC01847 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_02279 411477.PARMER_02179 3.18e-201 557.0 COG0077@1|root,COG0077@2|Bacteria,4NEEK@976|Bacteroidetes,2FNHW@200643|Bacteroidia,22XE0@171551|Porphyromonadaceae 976|Bacteroidetes E Prephenate dehydratase pheA - 4.2.1.51 ko:K04518 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00024 R00691,R01373 RC00360 ko00000,ko00001,ko00002,ko01000 - - - PDT BECNEDJF_02280 411477.PARMER_02178 9.66e-221 608.0 COG0583@1|root,COG0583@2|Bacteria,4NGZ5@976|Bacteroidetes,2FNH6@200643|Bacteroidia,22X0D@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator oxyR - - ko:K04761 ko02026,map02026 - - - ko00000,ko00001,ko03000 - - - HTH_1,LysR_substrate BECNEDJF_02281 411477.PARMER_02175 2.47e-112 322.0 COG0783@1|root,COG0783@2|Bacteria,4NQDD@976|Bacteroidetes,2FP8D@200643|Bacteroidia,22Y0J@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the Dps family dps - - ko:K04047 - - - - ko00000,ko03036 - - - Ferritin BECNEDJF_02283 411477.PARMER_02370 1.27e-98 300.0 COG1123@1|root,COG1123@2|Bacteria,4NIKC@976|Bacteroidetes,2FQ7J@200643|Bacteroidia,22X6G@171551|Porphyromonadaceae 976|Bacteroidetes P Protein of unknown function (DUF4435) - - - - - - - - - - - - AAA_21,DUF4435 BECNEDJF_02284 411477.PARMER_02369 0.0 1123.0 COG1807@1|root,COG1807@2|Bacteria,4NKI5@976|Bacteroidetes,2FMT9@200643|Bacteroidia,22WVD@171551|Porphyromonadaceae 976|Bacteroidetes M Dolichyl-phosphate-mannose-protein mannosyltransferase arnT - - - - - - - - - - - PMT_2 BECNEDJF_02285 411477.PARMER_02368 2.39e-138 400.0 COG0673@1|root,COG0673@2|Bacteria,4NHDS@976|Bacteroidetes,2FWWS@200643|Bacteroidia,22ZPV@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C BECNEDJF_02289 411477.PARMER_03884 2.12e-81 241.0 COG0799@1|root,COG0799@2|Bacteria,4NSKK@976|Bacteroidetes,2FSG4@200643|Bacteroidia,22YHP@171551|Porphyromonadaceae 976|Bacteroidetes J Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation rsfS - - ko:K09710 - - - - ko00000,ko03009 - - - RsfS BECNEDJF_02290 411477.PARMER_03885 0.0 1278.0 COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,2FNEA@200643|Bacteroidia,22X35@171551|Porphyromonadaceae 976|Bacteroidetes O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 BECNEDJF_02292 411477.PARMER_04053 0.0 2087.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FW4E@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02293 411477.PARMER_04052 0.0 1090.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FNY3@200643|Bacteroidia,22XJ7@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02294 411477.PARMER_04051 0.0 1897.0 COG3250@1|root,COG3250@2|Bacteria,4NHRH@976|Bacteroidetes,2FMR5@200643|Bacteroidia,23008@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4982) - - - - - - - - - - - - DUF4982,F5_F8_type_C,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_02295 411477.PARMER_04050 6.59e-275 749.0 COG1621@1|root,COG1621@2|Bacteria,4NI6T@976|Bacteroidetes,2FP34@200643|Bacteroidia,2309C@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 43 family - - - - - - - - - - - - Glyco_hydro_32N,Glyco_hydro_43 BECNEDJF_02296 411477.PARMER_04049 0.0 939.0 COG3119@1|root,COG3119@2|Bacteria,4NEPB@976|Bacteroidetes,2FS4E@200643|Bacteroidia 976|Bacteroidetes P COG COG3119 Arylsulfatase A and related enzymes - - - - - - - - - - - - Sulfatase BECNEDJF_02297 411477.PARMER_04048 0.0 1179.0 COG0488@1|root,COG0488@2|Bacteria,4NG1W@976|Bacteroidetes,2FMY5@200643|Bacteroidia,22W6R@171551|Porphyromonadaceae 976|Bacteroidetes S glycosyl transferase family 2 - - - ko:K06158 - - - - ko00000,ko03012 - - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn BECNEDJF_02298 411477.PARMER_04047 6.67e-282 770.0 COG1820@1|root,COG1820@2|Bacteria,4NK7A@976|Bacteroidetes,2G337@200643|Bacteroidia,231ZU@171551|Porphyromonadaceae 976|Bacteroidetes G Amidohydrolase family - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 BECNEDJF_02299 411477.PARMER_04046 1.34e-280 766.0 COG1820@1|root,COG1820@2|Bacteria,4NJ35@976|Bacteroidetes,2FMRP@200643|Bacteroidia,22XJK@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the metallo-dependent hydrolases superfamily. NagA family - - 3.5.1.25 ko:K01443 ko00520,ko01130,map00520,map01130 - R02059 RC00166,RC00300 ko00000,ko00001,ko01000 - - - Amidohydro_1 BECNEDJF_02300 411477.PARMER_04045 0.0 1325.0 COG0363@1|root,COG2120@1|root,COG0363@2|Bacteria,COG2120@2|Bacteria,4NDUN@976|Bacteroidetes,2FM2W@200643|Bacteroidia,22WHT@171551|Porphyromonadaceae 976|Bacteroidetes G glucosamine-6-phosphate deaminase nagB - 3.5.99.6 ko:K02564 ko00520,ko01100,map00520,map01100 - R00765 RC00163 ko00000,ko00001,ko01000 - - - Glucosamine_iso,PIG-L BECNEDJF_02301 999419.HMPREF1077_00217 4.25e-303 828.0 COG0702@1|root,COG0702@2|Bacteria,4NK2R@976|Bacteroidetes,2FQSZ@200643|Bacteroidia,22ZTN@171551|Porphyromonadaceae 976|Bacteroidetes GM Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02302 411477.PARMER_04339 3.85e-239 659.0 COG0642@1|root,COG2205@2|Bacteria,4NEZM@976|Bacteroidetes,2FN1Z@200643|Bacteroidia,22X0P@171551|Porphyromonadaceae 976|Bacteroidetes T Osmosensitive K+ channel His kinase sensor domain kdpD - 2.7.13.3 ko:K07646 ko02020,map02020 M00454 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - KdpD,Usp BECNEDJF_02303 411477.PARMER_04338 4.31e-182 506.0 29A93@1|root,2ZX9Y@2|Bacteria,4NNMP@976|Bacteroidetes,2FN4N@200643|Bacteroidia,22XQZ@171551|Porphyromonadaceae 976|Bacteroidetes S non supervised orthologous group - - - - - - - - - - - - Gcw_chp BECNEDJF_02304 411477.PARMER_04337 6.94e-60 188.0 COG2156@1|root,COG2156@2|Bacteria,4NMME@976|Bacteroidetes,2FP8I@200643|Bacteroidia,22XKR@171551|Porphyromonadaceae 976|Bacteroidetes P Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex kdpC GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006812,GO:0006813,GO:0008150,GO:0008324,GO:0008556,GO:0009987,GO:0015075,GO:0015077,GO:0015079,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0016020,GO:0016021,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0030001,GO:0031224,GO:0034220,GO:0042623,GO:0042625,GO:0042626,GO:0043492,GO:0044425,GO:0046873,GO:0051179,GO:0051234,GO:0055085,GO:0071804,GO:0071805,GO:0090662,GO:0098655,GO:0098660,GO:0098662,GO:0099131,GO:0099132 3.6.3.12 ko:K01548 ko02020,map02020 - - - ko00000,ko00001,ko01000 3.A.3.7 - - KdpC BECNEDJF_02305 999419.HMPREF1077_03718 1.48e-164 473.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_9 BECNEDJF_02306 999419.HMPREF1077_03718 5.87e-157 453.0 COG0642@1|root,COG2205@2|Bacteria,4NDXU@976|Bacteroidetes,2FNIT@200643|Bacteroidia,22WZF@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_9 BECNEDJF_02312 411477.PARMER_01820 9.45e-261 713.0 COG0673@1|root,COG0673@2|Bacteria,4NEQB@976|Bacteroidetes,2FPVB@200643|Bacteroidia,22YVW@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, C-terminal alpha/beta domain yvaA - 1.1.1.371 ko:K16044 ko00562,ko01120,map00562,map01120 - R09954 RC00182 ko00000,ko00001,ko01000 - - - GFO_IDH_MocA,GFO_IDH_MocA_C BECNEDJF_02313 411477.PARMER_02915 0.0 1366.0 COG3590@1|root,COG3590@2|Bacteria,4NEYB@976|Bacteroidetes,2FP7Y@200643|Bacteroidia,22WXJ@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase family M13 pepO - 3.4.24.71 ko:K01415,ko:K07386 - - - - ko00000,ko01000,ko01002,ko04147 - - - Peptidase_M13,Peptidase_M13_N BECNEDJF_02314 411477.PARMER_02914 0.0 1063.0 COG3534@1|root,COG3534@2|Bacteria,4NECK@976|Bacteroidetes,2FNNB@200643|Bacteroidia,22WR1@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-L-arabinofuranosidase C-terminus abf2 - 3.2.1.55 ko:K01209 ko00520,map00520 - R01762 - ko00000,ko00001,ko01000 - GH51 - Alpha-L-AF_C BECNEDJF_02315 411477.PARMER_02913 2.9e-224 617.0 COG1208@1|root,COG1208@2|Bacteria,4PKJR@976|Bacteroidetes,2G07F@200643|Bacteroidia,23247@171551|Porphyromonadaceae 976|Bacteroidetes JM COG NOG09722 non supervised orthologous group - - - - - - - - - - - - NTP_transferase BECNEDJF_02316 411477.PARMER_02911 0.0 865.0 COG2911@1|root,COG2911@2|Bacteria,4NHAF@976|Bacteroidetes,2FMVP@200643|Bacteroidia,22WVX@171551|Porphyromonadaceae 976|Bacteroidetes S Porin subfamily - - - - - - - - - - - - Porin_2 BECNEDJF_02317 411477.PARMER_02910 1.19e-159 447.0 COG0652@1|root,COG0652@2|Bacteria,4NMKP@976|Bacteroidetes,2G31W@200643|Bacteroidia,22XR7@171551|Porphyromonadaceae 976|Bacteroidetes M PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiA - 5.2.1.8 ko:K01802,ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase BECNEDJF_02318 411477.PARMER_02909 6.09e-176 491.0 COG0652@1|root,COG0652@2|Bacteria,4NGT6@976|Bacteroidetes,2FMZ6@200643|Bacteroidia,22XHA@171551|Porphyromonadaceae 976|Bacteroidetes O PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides ppiA - 5.2.1.8 ko:K03768 - - - - ko00000,ko01000,ko03110 - - - Pro_isomerase BECNEDJF_02319 411477.PARMER_02908 0.0 872.0 COG0534@1|root,COG0534@2|Bacteria,4NEBB@976|Bacteroidetes,2FN29@200643|Bacteroidia,22X54@171551|Porphyromonadaceae 976|Bacteroidetes V Mate efflux family protein norM - - ko:K03327 - - - - ko00000,ko02000 2.A.66.1 - - MatE BECNEDJF_02320 411477.PARMER_02907 0.0 1339.0 COG3855@1|root,COG3855@2|Bacteria,4NGBV@976|Bacteroidetes,2FPT1@200643|Bacteroidia,22X6J@171551|Porphyromonadaceae 976|Bacteroidetes G catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate fbp - 3.1.3.11 ko:K04041 ko00010,ko00030,ko00051,ko00680,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00030,map00051,map00680,map00710,map01100,map01110,map01120,map01130,map01200 M00003,M00165,M00167 R00762,R04780 RC00017 ko00000,ko00001,ko00002,ko01000 - - - FBPase_2 BECNEDJF_02321 411477.PARMER_02906 1.92e-210 582.0 COG0697@1|root,COG0697@2|Bacteria,4NGZ3@976|Bacteroidetes,2FSB0@200643|Bacteroidia,231HJ@171551|Porphyromonadaceae 976|Bacteroidetes EG EamA-like transporter family - - - - - - - - - - - - EamA BECNEDJF_02323 411477.PARMER_02905 0.0 1027.0 COG3193@1|root,COG3193@2|Bacteria,4P0RZ@976|Bacteroidetes,2G0AC@200643|Bacteroidia,23246@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02324 411477.PARMER_02904 0.0 1590.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FX80@200643|Bacteroidia,23245@171551|Porphyromonadaceae 976|Bacteroidetes H TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02325 411477.PARMER_00637 3.57e-142 409.0 28PFH@1|root,2ZC6N@2|Bacteria,4NGVG@976|Bacteroidetes,2FWMP@200643|Bacteroidia,2303N@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4272) - - - - - - - - - - - - DUF4272 BECNEDJF_02326 411477.PARMER_00638 0.0 1181.0 COG1073@1|root,COG1073@2|Bacteria,4PKM0@976|Bacteroidetes,2G0GU@200643|Bacteroidia,2323S@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG10880 non supervised orthologous group - - - - - - - - - - - - Lipase_GDSL_2,Peptidase_S9 BECNEDJF_02328 411477.PARMER_00093 2.28e-40 133.0 COG3655@1|root,COG3655@2|Bacteria,4NUP7@976|Bacteroidetes,2FTVE@200643|Bacteroidia,22YVT@171551|Porphyromonadaceae 976|Bacteroidetes K Cro/C1-type HTH DNA-binding domain - - - ko:K07727 - - - - ko00000,ko03000 - - - HTH_26 BECNEDJF_02329 411477.PARMER_00091 1.35e-92 270.0 2C25A@1|root,33QA9@2|Bacteria,4P120@976|Bacteroidetes,2FVCY@200643|Bacteroidia,2311F@171551|Porphyromonadaceae 976|Bacteroidetes S Family of unknown function (DUF3836) - - - - - - - - - - - - DUF3836 BECNEDJF_02330 411477.PARMER_00090 0.0 906.0 COG1350@1|root,COG1350@2|Bacteria,4PKSY@976|Bacteroidetes,2FMFD@200643|Bacteroidia,22WD1@171551|Porphyromonadaceae 976|Bacteroidetes E The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine trpB - 4.2.1.20 ko:K06001 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - PALP BECNEDJF_02332 411477.PARMER_02427 2.24e-299 818.0 COG3681@1|root,COG3681@2|Bacteria,4NHRU@976|Bacteroidetes,2FNP9@200643|Bacteroidia,22WFW@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the UPF0597 family - - - - - - - - - - - - SDH_alpha BECNEDJF_02333 411477.PARMER_02428 5.69e-260 712.0 COG3214@1|root,COG3214@2|Bacteria,4NGF2@976|Bacteroidetes,2FP5R@200643|Bacteroidia,22WBM@171551|Porphyromonadaceae 976|Bacteroidetes S Winged helix DNA-binding domain - - - - - - - - - - - - HTH_42 BECNEDJF_02334 411477.PARMER_01314 0.0 917.0 COG0593@1|root,COG0593@2|Bacteria,4NE6Q@976|Bacteroidetes,2FNPD@200643|Bacteroidia,22X3Z@171551|Porphyromonadaceae 976|Bacteroidetes L it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids dnaA GO:0003674,GO:0003676,GO:0003677,GO:0003688,GO:0003690,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0016020,GO:0034641,GO:0034645,GO:0043170,GO:0043565,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0071944,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1990837 - ko:K02313 ko02020,ko04112,map02020,map04112 - - - ko00000,ko00001,ko03032,ko03036 - - - Bac_DnaA,Bac_DnaA_C,DnaA_N BECNEDJF_02335 411477.PARMER_01316 8.71e-201 557.0 COG1463@1|root,COG1463@2|Bacteria,4NHT9@976|Bacteroidetes,2FPK9@200643|Bacteroidia,22X9M@171551|Porphyromonadaceae 976|Bacteroidetes Q Virulence factor Mce family protein - - - ko:K02067 ko02010,map02010 M00210,M00669,M00670 - - ko00000,ko00001,ko00002,ko02000 3.A.1.27 - - MlaD BECNEDJF_02336 411477.PARMER_01317 4.29e-280 769.0 COG0860@1|root,COG0860@2|Bacteria,4NGKC@976|Bacteroidetes,2FPGX@200643|Bacteroidia,22WFQ@171551|Porphyromonadaceae 976|Bacteroidetes M N-acetylmuramoyl-L-alanine amidase amiA - 3.5.1.28 ko:K01448 ko01503,map01503 M00727 R04112 RC00064,RC00141 ko00000,ko00001,ko00002,ko01000,ko01011,ko03036 - - - Amidase_3 BECNEDJF_02337 411477.PARMER_01318 8.85e-92 269.0 COG0359@1|root,COG0359@2|Bacteria,4NNRP@976|Bacteroidetes,2FSTU@200643|Bacteroidia,22XP0@171551|Porphyromonadaceae 976|Bacteroidetes J binds to the 23S rRNA rplI - - ko:K02939 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L9_C,Ribosomal_L9_N BECNEDJF_02338 411477.PARMER_01319 1.44e-56 176.0 COG0238@1|root,COG0238@2|Bacteria,4NSAR@976|Bacteroidetes,2FT22@200643|Bacteroidia,22Y4P@171551|Porphyromonadaceae 976|Bacteroidetes J Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit rpsR GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0015935,GO:0019538,GO:0022626,GO:0022627,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 - ko:K02963 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S18 BECNEDJF_02339 411477.PARMER_01320 2.32e-75 225.0 COG0360@1|root,COG0360@2|Bacteria,4NQ9W@976|Bacteroidetes,2FSHK@200643|Bacteroidia,22Y4M@171551|Porphyromonadaceae 976|Bacteroidetes J Binds together with S18 to 16S ribosomal RNA rpsF - - ko:K02990 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_S6 BECNEDJF_02340 411477.PARMER_03987 1.38e-27 100.0 298PA@1|root,2ZQYC@2|Bacteria,4P7SE@976|Bacteroidetes,2FTQE@200643|Bacteroidia 976|Bacteroidetes S Domain of unknown function (DUF4248) - - - - - - - - - - - - DUF4248 BECNEDJF_02341 411477.PARMER_01324 3.33e-252 691.0 COG2267@1|root,COG2267@2|Bacteria,4NHI2@976|Bacteroidetes,2FNPW@200643|Bacteroidia,22WWI@171551|Porphyromonadaceae 976|Bacteroidetes I Alpha/beta hydrolase family - - - - - - - - - - - - Hydrolase_4 BECNEDJF_02342 411477.PARMER_01325 0.0 1014.0 2C95T@1|root,2Z7NG@2|Bacteria,4NGVW@976|Bacteroidetes,2G2HY@200643|Bacteroidia,22XWJ@171551|Porphyromonadaceae 976|Bacteroidetes S Capsule assembly protein Wzi - - - - - - - - - - - - Caps_assemb_Wzi BECNEDJF_02343 411477.PARMER_01326 3.15e-174 486.0 COG0204@1|root,COG0204@2|Bacteria,4NG5R@976|Bacteroidetes,2FMJG@200643|Bacteroidia,22XRW@171551|Porphyromonadaceae 976|Bacteroidetes I Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family plsC - 2.3.1.51 ko:K00655 ko00561,ko00564,ko01100,ko01110,map00561,map00564,map01100,map01110 M00089 R02241,R09381 RC00004,RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Acyltransferase BECNEDJF_02344 997884.HMPREF1068_03676 9.77e-07 47.8 2A7KA@1|root,30WI8@2|Bacteria,4P9XY@976|Bacteroidetes,2FUN8@200643|Bacteroidia,4AS70@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02345 411477.PARMER_01328 7.41e-65 197.0 COG4191@1|root,COG4191@2|Bacteria,4NSNP@976|Bacteroidetes,2FTSX@200643|Bacteroidia,22YDJ@171551|Porphyromonadaceae 976|Bacteroidetes T Protein of unknown function (DUF3467) - - - - - - - - - - - - DUF3467 BECNEDJF_02346 411477.PARMER_01329 3.73e-206 570.0 COG2207@1|root,COG2207@2|Bacteria,4NEVG@976|Bacteroidetes,2FN82@200643|Bacteroidia,22WI8@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - AraC_binding,HTH_18 BECNEDJF_02347 411477.PARMER_01330 1.22e-217 599.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,22X95@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos BECNEDJF_02348 411477.PARMER_01331 0.0 2783.0 COG0086@1|root,COG0086@2|Bacteria,4NEMW@976|Bacteroidetes,2FMWR@200643|Bacteroidia,22VWB@171551|Porphyromonadaceae 976|Bacteroidetes K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoC GO:0000428,GO:0005575,GO:0005622,GO:0005623,GO:0030880,GO:0032991,GO:0044424,GO:0044464,GO:0061695,GO:1902494,GO:1990234 2.7.7.6 ko:K03046 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_Rpb1_1,RNA_pol_Rpb1_2,RNA_pol_Rpb1_3,RNA_pol_Rpb1_4,RNA_pol_Rpb1_5 BECNEDJF_02349 411477.PARMER_03313 3.59e-98 299.0 COG0741@1|root,COG1388@1|root,COG0741@2|Bacteria,COG1388@2|Bacteria,4NEKW@976|Bacteroidetes,2FM5V@200643|Bacteroidia,22VZV@171551|Porphyromonadaceae 976|Bacteroidetes M transglycosylase mltD - - ko:K08307 - - - - ko00000,ko01000,ko01011 - - - LysM,SLT BECNEDJF_02350 411477.PARMER_03312 0.0 1482.0 COG0317@1|root,COG0317@2|Bacteria,4NESY@976|Bacteroidetes,2FMEE@200643|Bacteroidia,22VYB@171551|Porphyromonadaceae 976|Bacteroidetes KT In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance relA - 2.7.6.5 ko:K00951 ko00230,map00230 - R00429 RC00002,RC00078 ko00000,ko00001,ko01000 - - - ACT_4,HD_4,RelA_SpoT,TGS BECNEDJF_02351 411477.PARMER_02272 4.36e-233 641.0 COG0451@1|root,COG0451@2|Bacteria,4NE3U@976|Bacteroidetes,2FNS7@200643|Bacteroidia,22VZ9@171551|Porphyromonadaceae 976|Bacteroidetes GM NAD dependent epimerase dehydratase family ltd - - - - - - - - - - - Epimerase BECNEDJF_02353 411477.PARMER_02271 1.36e-285 780.0 COG0156@1|root,COG0156@2|Bacteria,4NFBU@976|Bacteroidetes,2FN0E@200643|Bacteroidia,22WXW@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA kbl - 2.3.1.29 ko:K00639 ko00260,map00260 - R00371 RC00004,RC00394 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_02354 999419.HMPREF1077_01311 5.98e-206 569.0 COG1387@1|root,COG1387@2|Bacteria,4NIJU@976|Bacteroidetes,2FM5K@200643|Bacteroidia,22WVR@171551|Porphyromonadaceae 976|Bacteroidetes E Histidinol phosphatase - - 3.1.3.15 ko:K04486 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R03013 RC00017 ko00000,ko00001,ko00002,ko01000 - - - PHP BECNEDJF_02355 411477.PARMER_02269 1.18e-156 440.0 COG0745@1|root,COG0745@2|Bacteria,4NG7D@976|Bacteroidetes,2FMJH@200643|Bacteroidia,22X7P@171551|Porphyromonadaceae 976|Bacteroidetes T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain srrA - - ko:K07657,ko:K07658 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko02022 - - - Response_reg,Trans_reg_C BECNEDJF_02356 411477.PARMER_02268 0.0 1152.0 COG5002@1|root,COG5002@2|Bacteria,4NETP@976|Bacteroidetes,2FKYG@200643|Bacteroidia,22W46@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase - - 2.7.13.3 ko:K02484,ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA BECNEDJF_02357 411477.PARMER_02265 2.81e-196 545.0 2BGV8@1|root,32AUY@2|Bacteria,4P9FA@976|Bacteroidetes,2FZ9Z@200643|Bacteroidia,231AQ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02358 411477.PARMER_02264 0.0 1469.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FPEN@200643|Bacteroidia,22X01@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter permease - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_02359 411477.PARMER_02263 7.14e-157 440.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FMDA@200643|Bacteroidia,22W90@171551|Porphyromonadaceae 976|Bacteroidetes V bacteriocin export ABC transporter, lactococcin 972 group - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran BECNEDJF_02360 411477.PARMER_02262 0.0 1132.0 COG0577@1|root,COG0577@2|Bacteria,4NFGD@976|Bacteroidetes,2FNP6@200643|Bacteroidia,22VZ8@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_02361 411477.PARMER_00710 0.0 1545.0 COG0577@1|root,COG0577@2|Bacteria,4NFGD@976|Bacteroidetes,2FNP6@200643|Bacteroidia,22VZ8@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_02362 411477.PARMER_00709 5.61e-273 747.0 COG0477@1|root,COG2814@2|Bacteria,4NI1T@976|Bacteroidetes,2FRJG@200643|Bacteroidia,22WZ5@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1 BECNEDJF_02363 411477.PARMER_01930 3.21e-110 323.0 COG1052@1|root,COG1052@2|Bacteria,4NF1R@976|Bacteroidetes,2FMNY@200643|Bacteroidia,22WSN@171551|Porphyromonadaceae 976|Bacteroidetes CH D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ldhA - 1.1.1.28 ko:K03778 ko00620,ko01120,map00620,map01120 - R00704 RC00044 ko00000,ko00001,ko01000 - - - 2-Hacid_dh,2-Hacid_dh_C BECNEDJF_02364 411477.PARMER_01929 4.24e-214 590.0 COG4667@1|root,COG4667@2|Bacteria,4NIX2@976|Bacteroidetes,2FM09@200643|Bacteroidia,22WX4@171551|Porphyromonadaceae 976|Bacteroidetes S Patatin-like phospholipase - - - - - - - - - - - - Patatin BECNEDJF_02365 411477.PARMER_01928 3.06e-199 551.0 COG1218@1|root,COG1218@2|Bacteria,4NFHY@976|Bacteroidetes,2FP00@200643|Bacteroidia,22X12@171551|Porphyromonadaceae 976|Bacteroidetes P Inositol monophosphatase family cysQ - 3.1.3.7 ko:K01082 ko00920,ko01100,ko01120,ko01130,map00920,map01100,map01120,map01130 - R00188,R00508 RC00078 ko00000,ko00001,ko01000,ko03016 - - - Inositol_P BECNEDJF_02366 999419.HMPREF1077_00921 0.0 1278.0 COG3250@1|root,COG3250@2|Bacteria,4NFPC@976|Bacteroidetes,2G2Q9@200643|Bacteroidia,231H6@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 2, TIM barrel domain - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_02367 411477.PARMER_04123 1.35e-90 281.0 COG3250@1|root,COG3250@2|Bacteria,4NFPC@976|Bacteroidetes,2FPUZ@200643|Bacteroidia,22WX3@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 2 family - - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_02368 411477.PARMER_01139 0.0 1611.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FQUS@200643|Bacteroidia,22XES@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_02369 411477.PARMER_02434 6.94e-199 551.0 COG2207@1|root,COG2207@2|Bacteria,4NIW3@976|Bacteroidetes,2FKZW@200643|Bacteroidia,22ZQ0@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 BECNEDJF_02370 411477.PARMER_02435 0.0 1097.0 COG0845@1|root,COG2608@1|root,COG0845@2|Bacteria,COG2608@2|Bacteria,4NG8S@976|Bacteroidetes,2FMQN@200643|Bacteroidia,22X6K@171551|Porphyromonadaceae 976|Bacteroidetes MP Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K07798 ko02020,map02020 - - - ko00000,ko00001,ko02000 2.A.6.1.4,8.A.1 - - DUF3347,HMA,HlyD_D23 BECNEDJF_02371 411477.PARMER_03566 1.02e-192 534.0 COG0118@1|root,COG0118@2|Bacteria,4NF4J@976|Bacteroidetes,2FPAY@200643|Bacteroidia,22XFN@171551|Porphyromonadaceae 976|Bacteroidetes E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR hisH - - ko:K02501 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - GATase BECNEDJF_02372 411477.PARMER_03565 3.15e-171 478.0 COG0106@1|root,COG0106@2|Bacteria,4NEEX@976|Bacteroidetes,2FMBX@200643|Bacteroidia,22WHU@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine biosynthesis protein hisA GO:0000105,GO:0000162,GO:0003674,GO:0003824,GO:0003949,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006547,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016853,GO:0016860,GO:0016861,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0052803,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 5.3.1.16 ko:K01814 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04640 RC00945 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth BECNEDJF_02373 411477.PARMER_03564 8.05e-180 500.0 COG0107@1|root,COG0107@2|Bacteria,4NE16@976|Bacteroidetes,2FNY2@200643|Bacteroidia,22WRH@171551|Porphyromonadaceae 976|Bacteroidetes E IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit hisF GO:0000107,GO:0003674,GO:0003824,GO:0016740,GO:0016757,GO:0016763 - ko:K02500 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04558 RC00010,RC01190,RC01943 ko00000,ko00001,ko00002,ko01000 - - - His_biosynth BECNEDJF_02374 411477.PARMER_03563 8.19e-140 395.0 COG0139@1|root,COG0140@1|root,COG0139@2|Bacteria,COG0140@2|Bacteria,4NERE@976|Bacteroidetes,2FKYQ@200643|Bacteroidia,22WHQ@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine biosynthesis bifunctional protein hisIE hisI - 3.5.4.19,3.6.1.31 ko:K11755 ko00340,ko01100,ko01110,ko01230,map00340,map01100,map01110,map01230 M00026 R04035,R04037 RC00002,RC01055 ko00000,ko00001,ko00002,ko01000 - - - PRA-CH,PRA-PH BECNEDJF_02375 411477.PARMER_03562 6.4e-164 458.0 COG2884@1|root,COG2884@2|Bacteria,4NEP2@976|Bacteroidetes,2FMNR@200643|Bacteroidia,22W1P@171551|Porphyromonadaceae 976|Bacteroidetes D ABC transporter, ATP-binding protein ftsE - - ko:K09812 ko02010,map02010 M00256 - - ko00000,ko00001,ko00002,ko02000,ko03036 3.A.1.140 - - ABC_tran BECNEDJF_02376 411477.PARMER_03561 0.0 864.0 COG0527@1|root,COG0527@2|Bacteria,4NFWR@976|Bacteroidetes,2FMTV@200643|Bacteroidia,22X04@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the aspartokinase family lysC - 2.7.2.4 ko:K00928 ko00260,ko00261,ko00270,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00260,map00261,map00270,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00017,M00018,M00033,M00525,M00526,M00527 R00480 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase BECNEDJF_02377 411477.PARMER_03559 2.42e-283 773.0 COG0019@1|root,COG0019@2|Bacteria,4NE7X@976|Bacteroidetes,2FMGB@200643|Bacteroidia,22W16@171551|Porphyromonadaceae 976|Bacteroidetes E Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine lysA - 4.1.1.20 ko:K01586 ko00300,ko01100,ko01110,ko01120,ko01130,ko01230,map00300,map01100,map01110,map01120,map01130,map01230 M00016,M00525,M00526,M00527 R00451 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N,Orn_DAP_Arg_deC BECNEDJF_02378 411477.PARMER_03558 6.15e-280 765.0 COG1215@1|root,COG1215@2|Bacteria,4NESG@976|Bacteroidetes,2FN9E@200643|Bacteroidia,22YIF@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase family 2 - - - - - - - - - - - - Glyco_tranf_2_3,Glycos_transf_2 BECNEDJF_02379 411477.PARMER_03556 2.2e-291 796.0 COG4591@1|root,COG4591@2|Bacteria,4NFWZ@976|Bacteroidetes,2FMHC@200643|Bacteroidia,22WJ1@171551|Porphyromonadaceae 976|Bacteroidetes M ABC transporter permease lolE_1 - - ko:K09808 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko02000 3.A.1.125 - - FtsX,MacB_PCD BECNEDJF_02380 411477.PARMER_03555 7.93e-291 793.0 COG0436@1|root,COG0436@2|Bacteria,4NG6G@976|Bacteroidetes,2FN1B@200643|Bacteroidia,22X7G@171551|Porphyromonadaceae 976|Bacteroidetes E Aspartate aminotransferase aspC - 2.6.1.1,2.6.1.2,2.6.1.66 ko:K00812,ko:K14260 ko00220,ko00250,ko00270,ko00290,ko00330,ko00350,ko00360,ko00400,ko00401,ko00950,ko00960,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map00250,map00270,map00290,map00330,map00350,map00360,map00400,map00401,map00950,map00960,map01100,map01110,map01130,map01210,map01230 - R00258,R00355,R00694,R00734,R00896,R01215,R02433,R02619,R05052 RC00006,RC00008,RC00036 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_02381 411477.PARMER_03554 5.22e-209 579.0 COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,2FS6Q@200643|Bacteroidia,22XWC@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterised 5xTM membrane BCR, YitT family COG1284 - - - - - - - - - - - - DUF2179,YitT_membrane BECNEDJF_02382 411477.PARMER_03553 1.02e-74 224.0 2E81Z@1|root,332G1@2|Bacteria,4NX31@976|Bacteroidetes,2FSJB@200643|Bacteroidia,22YPD@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG30654 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_02383 411477.PARMER_03552 1.06e-122 350.0 COG0350@1|root,COG0350@2|Bacteria,4NFYC@976|Bacteroidetes,2FSA5@200643|Bacteroidia,22XTG@171551|Porphyromonadaceae 976|Bacteroidetes L Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated ogt - 2.1.1.63 ko:K00567,ko:K10778 - - - - ko00000,ko01000,ko03000,ko03400 - - - Ada_Zn_binding,DNA_binding_1,HTH_18,Methyltransf_1N BECNEDJF_02384 999419.HMPREF1077_00818 2.09e-269 739.0 COG0477@1|root,COG2814@2|Bacteria,4NE7F@976|Bacteroidetes,2FQAA@200643|Bacteroidia,22VYY@171551|Porphyromonadaceae 976|Bacteroidetes EGP Major Facilitator Superfamily - - - - - - - - - - - - MFS_1,MFS_1_like,Sugar_tr BECNEDJF_02385 411477.PARMER_03550 0.0 1204.0 COG0488@1|root,COG0488@2|Bacteria,4NES5@976|Bacteroidetes,2FMX8@200643|Bacteroidia,22W1Q@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter yfmR - - ko:K15738 - - - - ko00000,ko02000 3.A.1.120.6 - - ABC_tran,ABC_tran_CTD,ABC_tran_Xtn BECNEDJF_02386 411477.PARMER_01611 9.29e-225 620.0 COG0264@1|root,COG0264@2|Bacteria,4NF03@976|Bacteroidetes,2FNAD@200643|Bacteroidia,22W7D@171551|Porphyromonadaceae 976|Bacteroidetes J Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome tsf GO:0003674,GO:0003676,GO:0003723,GO:0003746,GO:0005488,GO:0006412,GO:0006414,GO:0006518,GO:0006807,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0019538,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0071704,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576 - ko:K02357 - - - - ko00000,ko03012,ko03029 - - - EF_TS BECNEDJF_02387 411477.PARMER_01612 9.72e-191 530.0 COG0052@1|root,COG0052@2|Bacteria,4NER0@976|Bacteroidetes,2FM4T@200643|Bacteroidia,22WM5@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the universal ribosomal protein uS2 family rpsB - - ko:K02967 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S2 BECNEDJF_02388 411477.PARMER_01613 2.49e-82 244.0 COG0103@1|root,COG0103@2|Bacteria,4NNN1@976|Bacteroidetes,2FSGZ@200643|Bacteroidia,22XV9@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the universal ribosomal protein uS9 family rpsI - - ko:K02996 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S9 BECNEDJF_02389 411477.PARMER_01614 9.91e-109 312.0 COG0102@1|root,COG0102@2|Bacteria,4NNGA@976|Bacteroidetes,2FS3I@200643|Bacteroidia,22XMC@171551|Porphyromonadaceae 976|Bacteroidetes J This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly rplM - - ko:K02871 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L13 BECNEDJF_02390 999419.HMPREF1077_00167 2.74e-138 392.0 COG3637@1|root,COG3637@2|Bacteria,4NRZA@976|Bacteroidetes,2G1FY@200643|Bacteroidia,22YYY@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 BECNEDJF_02391 411477.PARMER_01616 0.0 2515.0 COG0587@1|root,COG0587@2|Bacteria,4NFA0@976|Bacteroidetes,2FNND@200643|Bacteroidia,22X3C@171551|Porphyromonadaceae 976|Bacteroidetes L DNA-directed DNA polymerase dnaE - 2.7.7.7 ko:K02337 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_alpha,HHH_6,PHP,RNase_T,tRNA_anti-codon BECNEDJF_02392 411477.PARMER_01617 8.22e-72 215.0 COG3118@1|root,COG3118@2|Bacteria,4NQ5B@976|Bacteroidetes,2FTV5@200643|Bacteroidia,22YCQ@171551|Porphyromonadaceae 976|Bacteroidetes O Belongs to the thioredoxin family trxA - - ko:K03671 ko04621,ko05418,map04621,map05418 - - - ko00000,ko00001,ko03110 - - - Thioredoxin BECNEDJF_02393 411477.PARMER_01618 7.2e-166 463.0 COG4121@1|root,COG4121@2|Bacteria,4NE5S@976|Bacteroidetes,2FM5I@200643|Bacteroidia,22XPJ@171551|Porphyromonadaceae 976|Bacteroidetes S S-adenosyl-L-methionine-dependent methyltransferase mnmC - - - - - - - - - - - Methyltransf_30 BECNEDJF_02394 411477.PARMER_01619 0.0 1576.0 COG1629@1|root,COG4771@2|Bacteria,4NE4M@976|Bacteroidetes,2FNUY@200643|Bacteroidia,22VV4@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02395 411477.PARMER_01620 0.0 1478.0 COG0642@1|root,COG0745@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,4NE05@976|Bacteroidetes,2FN0Q@200643|Bacteroidia,2323X@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA BECNEDJF_02396 411477.PARMER_01621 3.39e-229 632.0 COG5000@1|root,COG5000@2|Bacteria,4NE49@976|Bacteroidetes,2FRVJ@200643|Bacteroidia,22VYX@171551|Porphyromonadaceae 976|Bacteroidetes T COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation zraS_1 - - - - - - - - - - - HATPase_c,HisKA BECNEDJF_02397 411477.PARMER_01622 0.0 878.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMTU@200643|Bacteroidia,22WJK@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma-54 interaction domain - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat BECNEDJF_02398 411477.PARMER_02797 2.22e-214 619.0 COG0644@1|root,COG0654@1|root,COG0644@2|Bacteria,COG0654@2|Bacteria,4NR3F@976|Bacteroidetes,2G2WD@200643|Bacteroidia,22ZRE@171551|Porphyromonadaceae 976|Bacteroidetes CH TAT (twin-arginine translocation) pathway signal sequence - - - - - - - - - - - - FAD_oxidored,TAT_signal BECNEDJF_02399 411477.PARMER_02796 0.0 1262.0 COG1053@1|root,COG1053@2|Bacteria,4NG56@976|Bacteroidetes,2FNK8@200643|Bacteroidia,22YF8@171551|Porphyromonadaceae 976|Bacteroidetes C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored BECNEDJF_02401 411477.PARMER_02793 0.0 1335.0 COG3525@1|root,COG3525@2|Bacteria,4NFC5@976|Bacteroidetes,2FQ22@200643|Bacteroidia,22X8T@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Glyco_hydro_20,Glyco_hydro_20b BECNEDJF_02402 411477.PARMER_02792 1.75e-169 473.0 COG1179@1|root,COG1179@2|Bacteria,4NEKB@976|Bacteroidetes,2FMG4@200643|Bacteroidia,22XGU@171551|Porphyromonadaceae 976|Bacteroidetes H COGs COG1179 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 1 hypB - - ko:K22132 - - - - ko00000,ko03016 - - - ThiF BECNEDJF_02403 411477.PARMER_02791 9.76e-153 429.0 COG1136@1|root,COG1136@2|Bacteria,4NGDU@976|Bacteroidetes,2FKZC@200643|Bacteroidia,22W92@171551|Porphyromonadaceae 976|Bacteroidetes V Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner lolD - - ko:K09810 ko02010,map02010 M00255 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.125 - - ABC_tran BECNEDJF_02404 411477.PARMER_02790 0.0 868.0 COG0733@1|root,COG0733@2|Bacteria,4NGQ5@976|Bacteroidetes,2FMVD@200643|Bacteroidia,22X4U@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the sodium neurotransmitter symporter (SNF) (TC 2.A.22) family - - - ko:K03308 - - - - ko00000 2.A.22.4,2.A.22.5 - - SNF BECNEDJF_02405 411477.PARMER_02789 2.91e-180 502.0 COG1555@1|root,COG1555@2|Bacteria,4NK4K@976|Bacteroidetes,2FPCH@200643|Bacteroidia,22Y5J@171551|Porphyromonadaceae 976|Bacteroidetes L Helix-hairpin-helix motif - - - - - - - - - - - - HHH_3 BECNEDJF_02406 411477.PARMER_02788 1.8e-217 599.0 COG3568@1|root,COG3568@2|Bacteria,4NHXV@976|Bacteroidetes,2FNR3@200643|Bacteroidia,22W7F@171551|Porphyromonadaceae 976|Bacteroidetes S Endonuclease/Exonuclease/phosphatase family - - - - - - - - - - - - Exo_endo_phos BECNEDJF_02407 999419.HMPREF1077_01505 0.0 1165.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,2FM6J@200643|Bacteroidia,22X0J@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02408 411477.PARMER_02786 0.0 2202.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22WTZ@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,Plug,STN,TonB_dep_Rec BECNEDJF_02409 411477.PARMER_02785 4.32e-87 256.0 2CP0Z@1|root,32SI8@2|Bacteria,4NQDB@976|Bacteroidetes,2FSIV@200643|Bacteroidia,22Y7G@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3037) - - - - - - - - - - - - DUF3037 BECNEDJF_02410 411477.PARMER_02784 2.6e-185 515.0 COG1718@1|root,COG1718@2|Bacteria,4NEF6@976|Bacteroidetes,2FQ2B@200643|Bacteroidia,22WD8@171551|Porphyromonadaceae 976|Bacteroidetes DT aminotransferase class I and II - - - - - - - - - - - - - BECNEDJF_02411 411477.PARMER_00525 5.24e-66 212.0 COG3328@1|root,COG3328@2|Bacteria,4NFQS@976|Bacteroidetes,2FM5A@200643|Bacteroidia,22XSB@171551|Porphyromonadaceae 976|Bacteroidetes L Transposase, Mutator family - - - - - - - - - - - - Transposase_mut BECNEDJF_02412 483215.BACFIN_06742 5.07e-141 406.0 COG3328@1|root,COG3328@2|Bacteria,4NFQS@976|Bacteroidetes,2FM5A@200643|Bacteroidia,4AMKB@815|Bacteroidaceae 976|Bacteroidetes L COG3328 Transposase and inactivated derivatives - - - - - - - - - - - - Transposase_mut BECNEDJF_02413 679937.Bcop_0107 4.27e-229 644.0 COG3039@1|root,COG3039@2|Bacteria,4NF00@976|Bacteroidetes,2FVB1@200643|Bacteroidia,4ASJ5@815|Bacteroidaceae 976|Bacteroidetes L PFAM Transposase DDE domain - - - - - - - - - - - - DDE_Tnp_1,DDE_Tnp_1_6,DUF772 BECNEDJF_02414 999419.HMPREF1077_03692 1.79e-257 706.0 COG3291@1|root,COG3537@1|root,COG3291@2|Bacteria,COG3537@2|Bacteria,4NKCP@976|Bacteroidetes,2FRRE@200643|Bacteroidia,22WW5@171551|Porphyromonadaceae 976|Bacteroidetes G Peptidase of plants and bacteria - - - - - - - - - - - - BSP BECNEDJF_02415 411477.PARMER_03866 0.0 1253.0 COG3637@1|root,COG3637@2|Bacteria,4NE4Y@976|Bacteroidetes,2G0HK@200643|Bacteroidia,2324C@171551|Porphyromonadaceae 976|Bacteroidetes M SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02416 411477.PARMER_03867 0.0 2007.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia,231P0@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02417 411477.PARMER_03869 0.0 2598.0 COG0642@1|root,COG0745@1|root,COG2207@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG2207@2|Bacteria,COG3292@2|Bacteria,4NG0B@976|Bacteroidetes,2FM88@200643|Bacteroidia,22ZRV@171551|Porphyromonadaceae 976|Bacteroidetes T Y_Y_Y domain - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y BECNEDJF_02418 411477.PARMER_03871 8.21e-268 733.0 COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,2FN8N@200643|Bacteroidia,22XR2@171551|Porphyromonadaceae 976|Bacteroidetes CO PFAM alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 BECNEDJF_02419 411477.PARMER_03872 5.91e-167 466.0 COG0822@1|root,COG0822@2|Bacteria,4NJ26@976|Bacteroidetes,2FNEH@200643|Bacteroidia,22XK3@171551|Porphyromonadaceae 976|Bacteroidetes C COG0822 NifU homolog involved in Fe-S cluster formation - - - - - - - - - - - - NifU_N BECNEDJF_02420 411477.PARMER_03873 5.32e-36 122.0 2C3XY@1|root,2ZF4X@2|Bacteria,4P7U7@976|Bacteroidetes,2FZ9B@200643|Bacteroidia,2319Y@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02421 411477.PARMER_03874 2.53e-240 660.0 2C4R5@1|root,2Z7JK@2|Bacteria,4NHGV@976|Bacteroidetes,2FMRU@200643|Bacteroidia,22VUI@171551|Porphyromonadaceae 976|Bacteroidetes S GGGtGRT protein - - - - - - - - - - - - GGGtGRT BECNEDJF_02424 411477.PARMER_02888 8.38e-120 342.0 2C3H9@1|root,32ZPJ@2|Bacteria,4NW3R@976|Bacteroidetes,2FQZX@200643|Bacteroidia,22YTJ@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF4199) - - - - - - - - - - - - DUF4199 BECNEDJF_02425 411477.PARMER_02887 4.32e-233 640.0 COG1215@1|root,COG1215@2|Bacteria,4PKF3@976|Bacteroidetes,2G3EY@200643|Bacteroidia,23223@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase like family 2 - - - - - - - - - - - - Glycos_transf_2 BECNEDJF_02426 411477.PARMER_02886 1.7e-127 362.0 COG0778@1|root,COG0778@2|Bacteria,4NKRC@976|Bacteroidetes,2FSSA@200643|Bacteroidia,231HX@171551|Porphyromonadaceae 976|Bacteroidetes C Putative TM nitroreductase - - - - - - - - - - - - Nitroreductase,TM1586_NiRdase BECNEDJF_02427 999419.HMPREF1077_01134 1.62e-73 221.0 2ASD9@1|root,31HSR@2|Bacteria,4NQ71@976|Bacteroidetes,2FS2B@200643|Bacteroidia,22YPC@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3276) - - - - - - - - - - - - DUF3276 BECNEDJF_02428 411477.PARMER_03890 1.32e-218 603.0 COG0781@1|root,COG0781@2|Bacteria,4NDVR@976|Bacteroidetes,2FMU4@200643|Bacteroidia,22WGB@171551|Porphyromonadaceae 976|Bacteroidetes K Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons nusB - - ko:K03625 - - - - ko00000,ko03009,ko03021 - - - NusB BECNEDJF_02429 999419.HMPREF1077_01132 4.46e-37 127.0 COG1862@1|root,COG1862@2|Bacteria,4NUT4@976|Bacteroidetes,2FTXK@200643|Bacteroidia,22YDB@171551|Porphyromonadaceae 976|Bacteroidetes U Preprotein translocase subunit YajC yajC - - ko:K03210 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - YajC BECNEDJF_02432 411477.PARMER_03314 1.91e-183 509.0 28PR3@1|root,31KKX@2|Bacteria,4NQPF@976|Bacteroidetes,2FSHR@200643|Bacteroidia,22Y55@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score - - - - - - - - - - - - - BECNEDJF_02433 411477.PARMER_03315 2.7e-200 556.0 COG1475@1|root,COG1475@2|Bacteria,4NFZ9@976|Bacteroidetes,2FP81@200643|Bacteroidia,22WNK@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the ParB family parB - - ko:K03497 - - - - ko00000,ko03000,ko03036,ko04812 - - - ParBc BECNEDJF_02434 411477.PARMER_00097 0.0 1124.0 COG0616@1|root,COG0616@2|Bacteria,4NES1@976|Bacteroidetes,2FMR0@200643|Bacteroidia,22WA3@171551|Porphyromonadaceae 976|Bacteroidetes OU signal peptide peptidase SppA, 67K type sppA - - ko:K04773 - - - - ko00000,ko01000,ko01002 - - - Peptidase_S49 BECNEDJF_02435 411477.PARMER_00844 2.8e-195 572.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22ZBI@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02436 411477.PARMER_00843 0.0 1230.0 COG1395@1|root,COG1395@2|Bacteria,4NHQT@976|Bacteroidetes,2FM5M@200643|Bacteroidia,22Z38@171551|Porphyromonadaceae 976|Bacteroidetes K Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02437 411477.PARMER_01847 3.11e-34 150.0 COG5492@1|root,COG5492@2|Bacteria 2|Bacteria N domain, Protein - - - - - - - - - - - - FMN_bind,Flg_new,Glug,WxL BECNEDJF_02438 411477.PARMER_01021 3.58e-124 353.0 COG1778@1|root,COG1778@2|Bacteria,4NMHD@976|Bacteroidetes,2FTGQ@200643|Bacteroidia,22XSR@171551|Porphyromonadaceae 976|Bacteroidetes S 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase kdsC - 3.1.3.45 ko:K03270 ko00540,ko01100,map00540,map01100 M00063 R03350 RC00017 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Hydrolase_3 BECNEDJF_02439 411477.PARMER_01020 9.79e-183 508.0 COG5495@1|root,COG5495@2|Bacteria,4NI4M@976|Bacteroidetes,2FMCQ@200643|Bacteroidia,22WAJ@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF2520) - - - - - - - - - - - - DUF2520,F420_oxidored,Rossmann-like BECNEDJF_02440 411477.PARMER_01019 1.32e-130 370.0 COG0778@1|root,COG0778@2|Bacteria,4NMXW@976|Bacteroidetes,2FKZR@200643|Bacteroidia,22Y0W@171551|Porphyromonadaceae 976|Bacteroidetes C nitroreductase - - - - - - - - - - - - Nitroreductase BECNEDJF_02441 411477.PARMER_01017 1.74e-91 279.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FP6I@200643|Bacteroidia,22WSV@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - ko:K18139,ko:K18300 ko01501,ko02024,map01501,map02024 M00641,M00642,M00643,M00647,M00718,M00768,M00822 - - ko00000,ko00001,ko00002,ko01504,ko02000 1.B.17,2.A.6.2 - - OEP BECNEDJF_02442 411477.PARMER_02568 1.16e-213 590.0 COG1180@1|root,COG1180@2|Bacteria,4NIUZ@976|Bacteroidetes,2FP2R@200643|Bacteroidia,22XIT@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S single cluster domain - - 1.97.1.4 ko:K04069 - - R04710 - ko00000,ko01000 - - - Fer4,Fer4_12,Radical_SAM BECNEDJF_02443 411477.PARMER_02566 0.0 1644.0 COG1882@1|root,COG1882@2|Bacteria,4NDWW@976|Bacteroidetes,2FMC2@200643|Bacteroidia,22WNW@171551|Porphyromonadaceae 976|Bacteroidetes C Pyruvate formate lyase-like - - 2.3.1.54,4.1.1.83 ko:K00656,ko:K18427 ko00620,ko00640,ko00650,ko01100,ko01120,map00620,map00640,map00650,map01100,map01120 - R00212,R06987 RC00004,RC01181,RC02742,RC02833 ko00000,ko00001,ko01000 - - - Gly_radical,PFL-like BECNEDJF_02444 411477.PARMER_02565 0.0 875.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMCJ@200643|Bacteroidia,22X7M@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - ko:K07713 ko02020,map02020 M00499 - - ko00000,ko00001,ko00002,ko02022 - - - HTH_8,Response_reg,Sigma54_activat BECNEDJF_02445 411477.PARMER_02564 1.26e-287 785.0 COG2311@1|root,COG2311@2|Bacteria,4NG01@976|Bacteroidetes,2FNJU@200643|Bacteroidia,22W53@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF418) - - - ko:K07148 - - - - ko00000 - - - DUF1624,DUF418 BECNEDJF_02446 411477.PARMER_02562 0.0 1554.0 COG0642@1|root,COG0784@1|root,COG2198@1|root,COG0784@2|Bacteria,COG2198@2|Bacteria,COG2205@2|Bacteria,4NFEF@976|Bacteroidetes,2FNF0@200643|Bacteroidia,22WR8@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA,Response_reg BECNEDJF_02447 411477.PARMER_02561 0.0 1137.0 COG2194@1|root,COG2194@2|Bacteria,4NHJ0@976|Bacteroidetes,2FMY6@200643|Bacteroidia,22WZA@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF1705) eptA - - - - - - - - - - - DUF1705,Sulfatase BECNEDJF_02448 999419.HMPREF1077_02699 0.0 1699.0 COG3250@1|root,COG3250@2|Bacteria,4NH5T@976|Bacteroidetes,2FMQ4@200643|Bacteroidia,22WQD@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF5127) - - - - - - - - - - - - DUF1793,DUF4964,DUF4965,DUF5127 BECNEDJF_02449 411477.PARMER_02559 1.27e-75 226.0 2EBGJ@1|root,335H5@2|Bacteria,4NX87@976|Bacteroidetes,2FTAW@200643|Bacteroidia,230Z8@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02450 411477.PARMER_02558 3.87e-162 453.0 COG0605@1|root,COG0605@2|Bacteria,4NDZ4@976|Bacteroidetes,2FNA0@200643|Bacteroidia,22W98@171551|Porphyromonadaceae 976|Bacteroidetes C Destroys radicals which are normally produced within the cells and which are toxic to biological systems sodB - 1.15.1.1 ko:K04564 ko04013,ko04068,ko04146,ko04211,ko04212,ko04213,ko05016,map04013,map04068,map04146,map04211,map04212,map04213,map05016 - - - ko00000,ko00001,ko01000 - - - Sod_Fe_C,Sod_Fe_N BECNEDJF_02451 411477.PARMER_02557 1.8e-83 246.0 COG3118@1|root,COG3118@2|Bacteria,4NQNX@976|Bacteroidetes,2FSPP@200643|Bacteroidia,22Y0M@171551|Porphyromonadaceae 976|Bacteroidetes O Thioredoxin - - - - - - - - - - - - Thioredoxin BECNEDJF_02453 411477.PARMER_01058 1.43e-221 620.0 COG3206@1|root,COG3206@2|Bacteria,4NEXU@976|Bacteroidetes,2FM9K@200643|Bacteroidia,22XVK@171551|Porphyromonadaceae 976|Bacteroidetes M Chain length determinant protein - - - - - - - - - - - - AAA_31,CbiA,GNVR,Wzz BECNEDJF_02454 999419.HMPREF1077_01069 9.83e-141 398.0 COG1961@1|root,COG1961@2|Bacteria,4NJM8@976|Bacteroidetes,2G377@200643|Bacteroidia,231VC@171551|Porphyromonadaceae 976|Bacteroidetes L Resolvase, N terminal domain - - - - - - - - - - - - Resolvase BECNEDJF_02455 411477.PARMER_04355 0.0 1141.0 COG0614@1|root,COG0614@2|Bacteria,4PKXB@976|Bacteroidetes,2G07K@200643|Bacteroidia 976|Bacteroidetes P SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02456 411477.PARMER_04356 0.0 2283.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02457 411477.PARMER_04357 1.31e-242 667.0 COG3712@1|root,COG3712@2|Bacteria,4NICU@976|Bacteroidetes,2FPP5@200643|Bacteroidia,22YI8@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_02458 411477.PARMER_04358 1.93e-137 389.0 COG1595@1|root,COG1595@2|Bacteria,4NRE8@976|Bacteroidetes,2FSP5@200643|Bacteroidia,22YM8@171551|Porphyromonadaceae 976|Bacteroidetes K Belongs to the sigma-70 factor family. ECF subfamily - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02460 411477.PARMER_04360 0.0 1294.0 COG3533@1|root,COG3533@2|Bacteria,4NFW3@976|Bacteroidetes,2FRKH@200643|Bacteroidia,22Z9V@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 BECNEDJF_02461 411477.PARMER_04361 0.0 1481.0 COG0210@1|root,COG0210@2|Bacteria,4NDWN@976|Bacteroidetes,2FNIM@200643|Bacteroidia,22WFT@171551|Porphyromonadaceae 976|Bacteroidetes L DNA helicase pcrA - 3.6.4.12 ko:K03657 ko03420,ko03430,map03420,map03430 - - - ko00000,ko00001,ko01000,ko03400 - - - UvrD-helicase,UvrD_C BECNEDJF_02462 411477.PARMER_04366 1.48e-294 802.0 COG1168@1|root,COG1168@2|Bacteria,4NETH@976|Bacteroidetes,2FMIZ@200643|Bacteroidia,22ZZZ@171551|Porphyromonadaceae 976|Bacteroidetes E Aminotransferase class I and II patB - 4.4.1.8 ko:K14155 ko00270,ko00450,ko01100,ko01110,ko01230,map00270,map00450,map01100,map01110,map01230 - R00782,R01286,R02408,R04941 RC00056,RC00069,RC00382,RC00488,RC00710,RC01245,RC02303 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_1_2 BECNEDJF_02463 411479.BACUNI_00591 5.43e-59 196.0 COG0534@1|root,COG0534@2|Bacteria,4NJQ3@976|Bacteroidetes,2FP59@200643|Bacteroidia,4AQ73@815|Bacteroidaceae 976|Bacteroidetes V MATE efflux family protein - - - - - - - - - - - - MatE BECNEDJF_02464 411477.PARMER_04368 2.85e-158 450.0 COG5434@1|root,COG5434@2|Bacteria,4NGH3@976|Bacteroidetes,2FMQQ@200643|Bacteroidia,22W0Q@171551|Porphyromonadaceae 976|Bacteroidetes M Protein of unknown function (DUF3737) - - - - - - - - - - - - DUF3737 BECNEDJF_02465 411477.PARMER_04369 1.25e-54 171.0 COG1917@1|root,COG1917@2|Bacteria,4NHTC@976|Bacteroidetes,2FN4M@200643|Bacteroidia,22X16@171551|Porphyromonadaceae 976|Bacteroidetes S Carboxymuconolactone decarboxylase family - - 4.1.1.44 ko:K01607 ko00362,ko01100,ko01120,ko01220,map00362,map01100,map01120,map01220 - R03470 RC00938 ko00000,ko00001,ko01000 - - - CMD,Cupin_2 BECNEDJF_02466 357276.EL88_15745 1.09e-37 126.0 COG1813@1|root,COG1813@2|Bacteria,4PKWR@976|Bacteroidetes,2FTYN@200643|Bacteroidia,4ARTG@815|Bacteroidaceae 976|Bacteroidetes K Cro/C1-type HTH DNA-binding domain - - - - - - - - - - - - HTH_26,HTH_3 BECNEDJF_02467 357276.EL88_15750 1.29e-197 547.0 COG0322@1|root,COG0322@2|Bacteria,4NHBM@976|Bacteroidetes,2FMBW@200643|Bacteroidia,4AT9K@815|Bacteroidaceae 976|Bacteroidetes L Domain of unknown function (DUF4357) - - - - - - - - - - - - DUF4357,GIY-YIG BECNEDJF_02468 762968.HMPREF9441_03436 5.73e-115 330.0 2ECEJ@1|root,336CU@2|Bacteria,4PNG5@976|Bacteroidetes,2FS8R@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02470 411477.PARMER_01986 3.05e-193 536.0 COG1414@1|root,COG1414@2|Bacteria,4NHTZ@976|Bacteroidetes,2FR53@200643|Bacteroidia,230HR@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix isocitrate lyase regulation - - - ko:K13641,ko:K19333 - - - - ko00000,ko03000 - - - HTH_IclR,IclR BECNEDJF_02471 411477.PARMER_01985 0.0 1204.0 COG1858@1|root,COG3391@1|root,COG1858@2|Bacteria,COG3391@2|Bacteria,4NIPP@976|Bacteroidetes,2FNMB@200643|Bacteroidia 976|Bacteroidetes C cytochrome c peroxidase - - - - - - - - - - - - Big_5,CBM_3,Cytochrom_D1,PKD BECNEDJF_02472 411477.PARMER_01984 4.58e-270 738.0 COG0251@1|root,COG0251@2|Bacteria,4NEVA@976|Bacteroidetes,2FN38@200643|Bacteroidia,22ZMQ@171551|Porphyromonadaceae 976|Bacteroidetes J endoribonuclease L-PSP - - - - - - - - - - - - - BECNEDJF_02473 411477.PARMER_01983 6.7e-164 460.0 COG3822@1|root,COG3822@2|Bacteria,4P1IF@976|Bacteroidetes,2FM0T@200643|Bacteroidia 976|Bacteroidetes S ABC-type sugar transport system, auxiliary component - - 5.3.1.15 ko:K09988 ko00040,map00040 - R01898 RC00516 ko00000,ko00001,ko01000 - - - - BECNEDJF_02474 411477.PARMER_01982 0.0 2714.0 COG1262@1|root,COG1262@2|Bacteria,4P1P1@976|Bacteroidetes,2G2Q7@200643|Bacteroidia 976|Bacteroidetes S NPCBM/NEW2 domain - - - - - - - - - - - - FGE-sulfatase,NPCBM BECNEDJF_02475 411477.PARMER_01981 0.0 1593.0 COG0755@1|root,COG1333@1|root,COG0755@2|Bacteria,COG1333@2|Bacteria,4NDY1@976|Bacteroidetes,2FKZ1@200643|Bacteroidia,22W1T@171551|Porphyromonadaceae 976|Bacteroidetes O cytochrome c-type biogenesis protein CcsB ccmC - - - - - - - - - - - Cytochrom_C_asm,ResB BECNEDJF_02476 411477.PARMER_01980 2.76e-70 211.0 2DMM9@1|root,32SDB@2|Bacteria,4P3MJ@976|Bacteroidetes,2FSXN@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02477 411477.PARMER_01979 3.2e-241 663.0 COG2376@1|root,COG2376@2|Bacteria,4NJC0@976|Bacteroidetes,2FPW4@200643|Bacteroidia 976|Bacteroidetes G Psort location Cytoplasmic, score 8.96 - - 2.7.1.121,2.7.1.28,2.7.1.29,4.6.1.15 ko:K00863,ko:K05878 ko00051,ko00561,ko00680,ko01100,ko01120,ko01200,ko04622,map00051,map00561,map00680,map01100,map01120,map01200,map04622 M00344 R01011,R01012,R01059 RC00002,RC00015,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Dak1,Dak2 BECNEDJF_02478 999419.HMPREF1077_03125 9.8e-135 382.0 COG1461@1|root,COG1461@2|Bacteria,4P1FU@976|Bacteroidetes,2FPD2@200643|Bacteroidia 976|Bacteroidetes S DAK2 domain protein - - 2.7.1.121 ko:K05879 ko00561,ko01100,map00561,map01100 - R01012 RC00015,RC00017 ko00000,ko00001,ko01000 - - - Dak2 BECNEDJF_02479 411477.PARMER_01977 5.94e-207 572.0 COG1830@1|root,COG1830@2|Bacteria,4P0GF@976|Bacteroidetes,2FP1C@200643|Bacteroidia 976|Bacteroidetes G DeoC/LacD family aldolase - - 2.3.1.245 ko:K08321 ko02024,map02024 - - - ko00000,ko00001,ko01000 - - - DeoC BECNEDJF_02480 411477.PARMER_01976 1.97e-223 615.0 COG1520@1|root,COG1520@2|Bacteria,4NX17@976|Bacteroidetes,2FQ59@200643|Bacteroidia 976|Bacteroidetes S COG NOG38781 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_02481 999419.HMPREF1077_01849 5.6e-45 145.0 2CM2G@1|root,33MNS@2|Bacteria,4NXT7@976|Bacteroidetes,2FVIX@200643|Bacteroidia,2318R@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02482 999419.HMPREF1077_01850 3.01e-163 457.0 COG0528@1|root,COG0528@2|Bacteria,4NE8Z@976|Bacteroidetes,2FMES@200643|Bacteroidia,22WRK@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reversible phosphorylation of UMP to UDP pyrH - 2.7.4.22 ko:K09903 ko00240,ko01100,map00240,map01100 - R00158 RC00002 ko00000,ko00001,ko01000 - - - AA_kinase BECNEDJF_02484 411477.PARMER_03613 4.23e-104 300.0 COG0319@1|root,COG0319@2|Bacteria,4NS93@976|Bacteroidetes,2FS5C@200643|Bacteroidia,22XW3@171551|Porphyromonadaceae 976|Bacteroidetes S Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA ybeY - - - - - - - - - - - UPF0054 BECNEDJF_02485 411477.PARMER_03614 1.35e-285 779.0 COG3391@1|root,COG3391@2|Bacteria,4P1PM@976|Bacteroidetes,2FP6F@200643|Bacteroidia,230NH@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 BECNEDJF_02487 411477.PARMER_00165 0.0 893.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMRV@200643|Bacteroidia,22W60@171551|Porphyromonadaceae 976|Bacteroidetes T COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains - - - - - - - - - - - - HTH_8,Response_reg,Sigma54_activat BECNEDJF_02488 411477.PARMER_00166 1.74e-125 357.0 COG1595@1|root,COG1595@2|Bacteria,4NSAX@976|Bacteroidetes,2FU6X@200643|Bacteroidia,22YGA@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02489 411477.PARMER_01679 1.51e-262 718.0 COG3391@1|root,COG3391@2|Bacteria,4NU1X@976|Bacteroidetes,2FR4G@200643|Bacteroidia,22YGV@171551|Porphyromonadaceae 976|Bacteroidetes S TolB-like 6-blade propeller-like - - - - - - - - - - - - TolB_like BECNEDJF_02491 1235803.C825_02443 2.17e-15 71.2 296Z9@1|root,2ZU7U@2|Bacteria,4P8CM@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA BECNEDJF_02492 411477.PARMER_03176 3.68e-92 275.0 2BZEB@1|root,2ZMZD@2|Bacteria,4NMWK@976|Bacteroidetes,2FQNP@200643|Bacteroidia,22XQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 BECNEDJF_02493 411477.PARMER_03224 6.86e-82 265.0 COG4206@1|root,COG4206@2|Bacteria,4PKFW@976|Bacteroidetes,2FM4V@200643|Bacteroidia,22WYS@171551|Porphyromonadaceae 976|Bacteroidetes H Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 BECNEDJF_02494 411477.PARMER_03225 1.3e-132 377.0 COG0705@1|root,COG0705@2|Bacteria,4NECA@976|Bacteroidetes,2FUYA@200643|Bacteroidia,231V4@171551|Porphyromonadaceae 976|Bacteroidetes S Rhomboid family - - - - - - - - - - - - Rhomboid BECNEDJF_02499 411477.PARMER_03089 3.86e-165 461.0 COG3637@1|root,COG3637@2|Bacteria,4P1BM@976|Bacteroidetes,2FQBA@200643|Bacteroidia 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 BECNEDJF_02500 411479.BACUNI_02828 0.0 1143.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,4AT67@815|Bacteroidaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02501 411477.PARMER_02462 6.53e-81 261.0 COG1193@1|root,COG1193@2|Bacteria,4NFE6@976|Bacteroidetes,2FMKP@200643|Bacteroidia,22X9R@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity mutS2 - - ko:K07456 ko03430,map03430 - - - ko00000,ko00001,ko03400 - - - MutS_V,Smr BECNEDJF_02502 411477.PARMER_02461 8.34e-255 699.0 COG0598@1|root,COG0598@2|Bacteria,4NG3C@976|Bacteroidetes,2FPIV@200643|Bacteroidia,22XS7@171551|Porphyromonadaceae 976|Bacteroidetes P Mediates influx of magnesium ions corA - - ko:K03284 - - - - ko00000,ko02000 1.A.35.1,1.A.35.3 - - CorA BECNEDJF_02503 411477.PARMER_02460 1.26e-139 394.0 COG1961@1|root,COG1961@2|Bacteria,4NJM8@976|Bacteroidetes,2FMQS@200643|Bacteroidia,22XYK@171551|Porphyromonadaceae 976|Bacteroidetes L Resolvase, N terminal domain - - - - - - - - - - - - HTH_7,Resolvase BECNEDJF_02504 411477.PARMER_04011 6.48e-58 191.0 COG1538@1|root,COG1538@2|Bacteria,4NF4X@976|Bacteroidetes,2FN2J@200643|Bacteroidia,22WEM@171551|Porphyromonadaceae 976|Bacteroidetes MU outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_02505 411477.PARMER_04012 3.87e-239 658.0 COG0845@1|root,COG0845@2|Bacteria,4NF23@976|Bacteroidetes,2FMQJ@200643|Bacteroidia,22VUK@171551|Porphyromonadaceae 976|Bacteroidetes M Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - HlyD_D23 BECNEDJF_02506 411477.PARMER_04013 0.0 1916.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22VY6@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family czcA - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran BECNEDJF_02507 411477.PARMER_04014 1.31e-67 204.0 COG0347@1|root,COG0347@2|Bacteria,4NSBG@976|Bacteroidetes,2FT39@200643|Bacteroidia,22YG9@171551|Porphyromonadaceae 976|Bacteroidetes E COG NOG19114 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_02508 411477.PARMER_04015 5.88e-164 459.0 COG0745@1|root,COG0745@2|Bacteria,4NF1I@976|Bacteroidetes,2FNZV@200643|Bacteroidia,22WBV@171551|Porphyromonadaceae 976|Bacteroidetes K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - Response_reg,Trans_reg_C BECNEDJF_02509 411477.PARMER_04016 2.35e-179 499.0 2DBF0@1|root,2Z8VT@2|Bacteria,4NECW@976|Bacteroidetes,2FP7Z@200643|Bacteroidia,22X94@171551|Porphyromonadaceae 976|Bacteroidetes S 3-oxo-5-alpha-steroid 4-dehydrogenase - - 1.3.1.22 ko:K12343 ko00140,map00140 - R02208,R02497,R08954,R10242 RC00145 ko00000,ko00001,ko01000 - - - Steroid_dh BECNEDJF_02510 411477.PARMER_04017 2.41e-301 821.0 COG1902@1|root,COG1902@2|Bacteria,4NF98@976|Bacteroidetes,2FNNA@200643|Bacteroidia,22W6P@171551|Porphyromonadaceae 976|Bacteroidetes C NADH:flavin oxidoreductase / NADH oxidase family namA - - - - - - - - - - - Oxidored_FMN BECNEDJF_02511 411477.PARMER_04018 9.39e-195 541.0 COG1028@1|root,COG1028@2|Bacteria,4NN35@976|Bacteroidetes,2FP1K@200643|Bacteroidia,22XQ0@171551|Porphyromonadaceae 976|Bacteroidetes IQ Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short BECNEDJF_02512 411477.PARMER_04020 1.41e-129 369.0 COG1825@1|root,COG1825@2|Bacteria,4NEN6@976|Bacteroidetes,2FN3J@200643|Bacteroidia,22XPV@171551|Porphyromonadaceae 976|Bacteroidetes J This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance ctc - - ko:K02897 ko03010,map03010 M00178 - - ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L25p,Ribosomal_TL5_C BECNEDJF_02513 411477.PARMER_04021 1.55e-134 380.0 COG0193@1|root,COG0193@2|Bacteria,4NI7N@976|Bacteroidetes,2FN36@200643|Bacteroidia,22VZX@171551|Porphyromonadaceae 976|Bacteroidetes J The natural substrate for this enzyme may be peptidyl- tRNAs which drop off the ribosome during protein synthesis pth - 3.1.1.29 ko:K01056 - - - - ko00000,ko01000,ko03012 - - - Pept_tRNA_hydro BECNEDJF_02514 411477.PARMER_04022 2.89e-100 290.0 COG1188@1|root,COG1188@2|Bacteria,4NP8I@976|Bacteroidetes,2FRYM@200643|Bacteroidia,22Y0I@171551|Porphyromonadaceae 976|Bacteroidetes J S4 domain protein hslR - - ko:K04762 - - - - ko00000,ko03110 - - - S4 BECNEDJF_02515 999419.HMPREF1077_01007 3.3e-137 389.0 2DNG4@1|root,32XBP@2|Bacteria,4NUAE@976|Bacteroidetes,2FTVS@200643|Bacteroidia,22ZMR@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02516 411477.PARMER_04025 6.18e-238 654.0 COG0526@1|root,COG0526@2|Bacteria,4NEX3@976|Bacteroidetes,2FM3J@200643|Bacteroidia,231UD@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369 BECNEDJF_02517 411477.PARMER_04026 5e-177 494.0 COG0716@1|root,COG1149@1|root,COG0716@2|Bacteria,COG1149@2|Bacteria,4NPJC@976|Bacteroidetes,2G08U@200643|Bacteroidia,231PC@171551|Porphyromonadaceae 976|Bacteroidetes C 4Fe-4S dicluster domain - - - - - - - - - - - - Fer4 BECNEDJF_02518 411477.PARMER_04027 0.0 1049.0 COG2234@1|root,COG2234@2|Bacteria,4NE66@976|Bacteroidetes,2FPXP@200643|Bacteroidia,22ZQH@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family M28 - - - - - - - - - - - - PA,Peptidase_M28 BECNEDJF_02520 411477.PARMER_02322 1.17e-256 703.0 COG1073@1|root,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,2FMNP@200643|Bacteroidia,22W0J@171551|Porphyromonadaceae 976|Bacteroidetes S COG COG1073 Hydrolases of the alpha beta superfamily - - - ko:K06889 - - - - ko00000 - - - AXE1,DLH,Peptidase_S15 BECNEDJF_02521 411477.PARMER_02323 0.0 1009.0 28KQC@1|root,2ZA86@2|Bacteria,4PKWK@976|Bacteroidetes,2FMPR@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02522 411477.PARMER_02325 8.82e-213 588.0 COG0524@1|root,COG0524@2|Bacteria,4NENQ@976|Bacteroidetes,2FPM3@200643|Bacteroidia,22XY8@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway rbsK - 2.7.1.15 ko:K00852 ko00030,map00030 - R01051,R02750 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB BECNEDJF_02523 411477.PARMER_02326 6.27e-248 680.0 COG1957@1|root,COG1957@2|Bacteria,4NH09@976|Bacteroidetes,2FRDT@200643|Bacteroidia,230Q0@171551|Porphyromonadaceae 976|Bacteroidetes F Inosine-uridine preferring nucleoside hydrolase - - - - - - - - - - - - IU_nuc_hydro BECNEDJF_02524 411477.PARMER_02327 3.03e-232 640.0 COG4975@1|root,COG4975@2|Bacteria,4NF22@976|Bacteroidetes,2FMYN@200643|Bacteroidia,22X3I@171551|Porphyromonadaceae 976|Bacteroidetes G Sugar transport protein glcU - - ko:K05340 - - - - ko00000,ko02000 2.A.7.5 - - Ureide_permease BECNEDJF_02525 411477.PARMER_02329 8e-176 490.0 2B0HH@1|root,31SV0@2|Bacteria,4NRU4@976|Bacteroidetes,2FTFR@200643|Bacteroidia,22Y90@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02526 411477.PARMER_02330 1.45e-85 252.0 COG2246@1|root,COG2246@2|Bacteria,4NVF9@976|Bacteroidetes,2FUTU@200643|Bacteroidia,22YT7@171551|Porphyromonadaceae 976|Bacteroidetes S GtrA-like protein - - - - - - - - - - - - GtrA BECNEDJF_02527 411477.PARMER_02331 7.65e-224 617.0 COG0463@1|root,COG0463@2|Bacteria,4NGGM@976|Bacteroidetes,2FMW6@200643|Bacteroidia,22XG6@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase - - - ko:K20534 - - - - ko00000,ko01000,ko01005,ko02000 4.D.2.1.9 GT2 - Glycos_transf_2 BECNEDJF_02528 411477.PARMER_02332 1.6e-94 275.0 COG3871@1|root,COG3871@2|Bacteria,4NTQW@976|Bacteroidetes,2FS0Y@200643|Bacteroidia 976|Bacteroidetes K stress protein (general stress protein 26) - - - - - - - - - - - - Pyrid_ox_like BECNEDJF_02529 411477.PARMER_02333 3.46e-204 563.0 COG2207@1|root,COG2207@2|Bacteria,4NRFM@976|Bacteroidetes,2FMZV@200643|Bacteroidia,22Y4E@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - HTH_18 BECNEDJF_02530 411477.PARMER_02334 7.04e-269 736.0 COG1929@1|root,COG1929@2|Bacteria,4NFK8@976|Bacteroidetes,2FP0A@200643|Bacteroidia,22WR9@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycerate kinase type-1 family glxK - 2.7.1.165 ko:K00865 ko00260,ko00561,ko00630,ko01100,ko01120,ko01130,map00260,map00561,map00630,map01100,map01120,map01130 - R08572 RC00002,RC00428 ko00000,ko00001,ko01000 - - - Gly_kinase BECNEDJF_02531 411477.PARMER_02335 0.0 971.0 COG0362@1|root,COG0362@2|Bacteria,4NG05@976|Bacteroidetes,2FMFW@200643|Bacteroidia,22WS9@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the oxidative decarboxylation of 6- phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH gnd - 1.1.1.343,1.1.1.44 ko:K00033 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map00480,map01100,map01110,map01120,map01130,map01200 M00004,M00006 R01528,R10221 RC00001,RC00539 ko00000,ko00001,ko00002,ko01000 - - - 6PGD,NAD_binding_2 BECNEDJF_02532 411477.PARMER_02336 0.0 1001.0 COG0364@1|root,COG0364@2|Bacteria,4NE59@976|Bacteroidetes,2FNER@200643|Bacteroidia,22WB5@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone zwf - 1.1.1.363,1.1.1.49 ko:K00036 ko00030,ko00480,ko01100,ko01110,ko01120,ko01130,ko01200,ko05230,map00030,map00480,map01100,map01110,map01120,map01130,map01200,map05230 M00004,M00006,M00008 R00835,R02736,R10907 RC00001,RC00066 ko00000,ko00001,ko00002,ko01000,ko04147 - - - G6PD_C,G6PD_N BECNEDJF_02533 411477.PARMER_02337 1.56e-173 483.0 COG0363@1|root,COG0363@2|Bacteria,4NGB9@976|Bacteroidetes,2FNZF@200643|Bacteroidia,22XT3@171551|Porphyromonadaceae 976|Bacteroidetes G 6-phosphogluconolactonase pgl - 3.1.1.31 ko:K01057 ko00030,ko01100,ko01110,ko01120,ko01130,ko01200,map00030,map01100,map01110,map01120,map01130,map01200 M00004,M00006,M00008 R02035 RC00537 ko00000,ko00001,ko00002,ko01000 - - - Glucosamine_iso BECNEDJF_02534 411477.PARMER_02338 1.29e-142 406.0 COG2035@1|root,COG2035@2|Bacteria,4NFKI@976|Bacteroidetes,2FPD1@200643|Bacteroidia,22WH6@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF368) - - - ko:K08974 - - - - ko00000 - - - DUF368 BECNEDJF_02535 411477.PARMER_01141 2.81e-232 646.0 COG0008@1|root,COG0008@2|Bacteria,4NEED@976|Bacteroidetes,2FN2D@200643|Bacteroidia,22WXH@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) gltX - 6.1.1.17 ko:K01885 ko00860,ko00970,ko01100,ko01110,ko01120,map00860,map00970,map01100,map01110,map01120 M00121,M00359,M00360 R05578 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko02048,ko03016 - - - tRNA-synt_1c BECNEDJF_02536 411477.PARMER_01140 2.07e-302 823.0 COG1519@1|root,COG1519@2|Bacteria,4NESA@976|Bacteroidetes,2FPNI@200643|Bacteroidia,22XA0@171551|Porphyromonadaceae 976|Bacteroidetes M transferase waaA - 2.4.99.12,2.4.99.13,2.4.99.14,2.4.99.15 ko:K02527 ko00540,ko01100,map00540,map01100 M00060,M00080 R04658,R05074,R09763 RC00009,RC00077,RC00247 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT30 - Glycos_transf_N BECNEDJF_02537 411477.PARMER_04371 2.94e-108 312.0 COG1359@1|root,COG1359@2|Bacteria,4NTAS@976|Bacteroidetes,2G2QA@200643|Bacteroidia,230ZG@171551|Porphyromonadaceae 976|Bacteroidetes S Antibiotic biosynthesis monooxygenase - - - - - - - - - - - - ABM,Amidohydro_2,CMD BECNEDJF_02538 411477.PARMER_04372 2.06e-220 607.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,22WH9@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - HTH_18 BECNEDJF_02542 411477.PARMER_00580 0.0 874.0 COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,2FNFH@200643|Bacteroidia,231UH@171551|Porphyromonadaceae 976|Bacteroidetes L DnaB-like helicase N terminal domain - - 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB,DnaB_C BECNEDJF_02543 411477.PARMER_00581 3.26e-296 809.0 COG0358@1|root,COG0358@2|Bacteria,4NENT@976|Bacteroidetes,2FMV1@200643|Bacteroidia,22WQI@171551|Porphyromonadaceae 976|Bacteroidetes L RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication dnaG - - ko:K02316 ko03030,map03030 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB_bind,Toprim_2,Toprim_4,Toprim_N,zf-CHC2 BECNEDJF_02544 411477.PARMER_00582 7.18e-184 511.0 COG0463@1|root,COG0463@2|Bacteria,4PKFU@976|Bacteroidetes,2G3FQ@200643|Bacteroidia,231N7@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyl transferase family 2 - - - - - - - - - - - - Glycos_transf_2 BECNEDJF_02545 411477.PARMER_00583 0.0 1616.0 COG4485@1|root,COG4485@2|Bacteria,4NEE5@976|Bacteroidetes,2FMKE@200643|Bacteroidia,22VZ1@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - YfhO BECNEDJF_02546 411477.PARMER_00585 7.29e-244 669.0 COG1216@1|root,COG1216@2|Bacteria,4NFS6@976|Bacteroidetes,2FNNV@200643|Bacteroidia,22W6N@171551|Porphyromonadaceae 976|Bacteroidetes M glycosyl transferase family 2 - - - - - - - - - - - - Glyco_trans_2_3,Glycos_transf_2 BECNEDJF_02547 411477.PARMER_00586 1.03e-194 538.0 COG2227@1|root,COG2227@2|Bacteria,4NJ5I@976|Bacteroidetes,2FPAS@200643|Bacteroidia,22W82@171551|Porphyromonadaceae 976|Bacteroidetes H Methyltransferase domain - - - - - - - - - - - - Methyltransf_11,Methyltransf_23,Methyltransf_25,Methyltransf_31 BECNEDJF_02548 411477.PARMER_00587 0.0 927.0 COG0499@1|root,COG0499@2|Bacteria,4NEKE@976|Bacteroidetes,2FPWZ@200643|Bacteroidia,22W9Y@171551|Porphyromonadaceae 976|Bacteroidetes H May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine ahcY GO:0000096,GO:0003674,GO:0003824,GO:0004013,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006139,GO:0006520,GO:0006534,GO:0006555,GO:0006575,GO:0006725,GO:0006732,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009066,GO:0009069,GO:0009116,GO:0009119,GO:0009987,GO:0016787,GO:0016801,GO:0016802,GO:0017144,GO:0019752,GO:0033353,GO:0034641,GO:0042278,GO:0043436,GO:0044237,GO:0044238,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0046128,GO:0046439,GO:0046483,GO:0046498,GO:0046500,GO:0051186,GO:0055086,GO:0071704,GO:0072521,GO:1901135,GO:1901360,GO:1901564,GO:1901605,GO:1901657 3.3.1.1 ko:K01251 ko00270,ko01100,map00270,map01100 M00035 R00192,R04936 RC00056,RC00069,RC01161,RC01243 ko00000,ko00001,ko00002,ko01000,ko01009,ko04147 - - - AdoHcyase,AdoHcyase_NAD BECNEDJF_02549 411477.PARMER_00588 0.0 1128.0 COG0318@1|root,COG0318@2|Bacteria,4NFPF@976|Bacteroidetes,2FMTR@200643|Bacteroidia,22W6H@171551|Porphyromonadaceae 976|Bacteroidetes IQ AMP-binding enzyme C-terminal domain - - - ko:K00666 - - - - ko00000,ko01000,ko01004 - - - AMP-binding,AMP-binding_C BECNEDJF_02550 999419.HMPREF1077_01390 1.26e-132 376.0 COG1396@1|root,COG1917@1|root,COG1396@2|Bacteria,COG1917@2|Bacteria,4NN23@976|Bacteroidetes,2FN1Y@200643|Bacteroidia,22XT7@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix domain - - - - - - - - - - - - Cupin_2,HTH_19,HTH_3 BECNEDJF_02552 411477.PARMER_00590 1.38e-54 171.0 COG0184@1|root,COG0184@2|Bacteria,4NS7U@976|Bacteroidetes,2FTTZ@200643|Bacteroidia,22YD7@171551|Porphyromonadaceae 976|Bacteroidetes J Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome rpsO GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015935,GO:0022626,GO:0022627,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02956 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S15 BECNEDJF_02553 411477.PARMER_00591 0.0 1179.0 COG1217@1|root,COG1217@2|Bacteria,4NDVM@976|Bacteroidetes,2FMNU@200643|Bacteroidia,22WPR@171551|Porphyromonadaceae 976|Bacteroidetes T GTP-binding protein TypA typA - - ko:K06207 - - - - ko00000 - - - EFG_C,GTP_EFTU,GTP_EFTU_D2 BECNEDJF_02554 411477.PARMER_01336 5.93e-93 272.0 COG0080@1|root,COG0080@2|Bacteria,4NM60@976|Bacteroidetes,2FRYX@200643|Bacteroidia,22XQN@171551|Porphyromonadaceae 976|Bacteroidetes J Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors rplK - - ko:K02867 ko03010,map03010 M00178,M00179 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L11,Ribosomal_L11_N BECNEDJF_02555 411477.PARMER_01337 2.49e-123 352.0 COG0250@1|root,COG0250@2|Bacteria,4NF2X@976|Bacteroidetes,2FNJ6@200643|Bacteroidia,22XKN@171551|Porphyromonadaceae 976|Bacteroidetes K Participates in transcription elongation, termination and antitermination nusG - - ko:K02601 - - - - ko00000,ko03009,ko03021 - - - KOW,NusG BECNEDJF_02556 411477.PARMER_01338 5.7e-36 122.0 COG0690@1|root,COG0690@2|Bacteria,4NUSJ@976|Bacteroidetes,2FUTR@200643|Bacteroidia,22YRZ@171551|Porphyromonadaceae 976|Bacteroidetes U Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation secE - - ko:K03073 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.2 - - SecE BECNEDJF_02558 411477.PARMER_01340 3.47e-216 600.0 COG0050@1|root,COG0050@2|Bacteria,4NEWS@976|Bacteroidetes,2FKZA@200643|Bacteroidia,22W1B@171551|Porphyromonadaceae 976|Bacteroidetes J This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis tuf - - ko:K02358 - - - - ko00000,ko03012,ko03029,ko04147 - - - GTP_EFTU,GTP_EFTU_D2,GTP_EFTU_D3 BECNEDJF_02559 411477.PARMER_03682 1.14e-150 431.0 COG3637@1|root,COG3637@2|Bacteria,4NGSV@976|Bacteroidetes,2FQ5B@200643|Bacteroidia,22W52@171551|Porphyromonadaceae 976|Bacteroidetes M Phosphate-selective porin O and P - - - - - - - - - - - - Porin_O_P BECNEDJF_02560 411477.PARMER_03681 0.0 1647.0 COG1554@1|root,COG1554@2|Bacteria,4NEWW@976|Bacteroidetes,2FMF9@200643|Bacteroidia,22W4V@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 65, N-terminal domain - - 3.2.1.51 ko:K15923 ko00511,map00511 - - - ko00000,ko00001,ko01000 - GH95 - Glyco_hyd_65N_2 BECNEDJF_02561 411477.PARMER_03680 6.85e-266 727.0 COG2730@1|root,COG2730@2|Bacteria,4NJFV@976|Bacteroidetes,2FQ62@200643|Bacteroidia 976|Bacteroidetes G Belongs to the glycosyl hydrolase 5 (cellulase A) family celC - 3.2.1.4 ko:K01179 ko00500,ko01100,map00500,map01100 - R06200,R11307,R11308 - ko00000,ko00001,ko01000 - GH5,GH9 - Cellulase BECNEDJF_02562 411477.PARMER_03679 0.0 1189.0 COG1132@1|root,COG1132@2|Bacteria,4NE2D@976|Bacteroidetes,2FMUK@200643|Bacteroidia,22VY0@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein msbA - - ko:K06147,ko:K11085 ko02010,map02010 - - - ko00000,ko00001,ko01000,ko02000 3.A.1.106,3.A.1.109,3.A.1.21 - - ABC_membrane,ABC_tran BECNEDJF_02563 411477.PARMER_03677 7.72e-114 326.0 2E9KC@1|root,333T4@2|Bacteria,4NWT8@976|Bacteroidetes,2FUP9@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02564 999419.HMPREF1077_02179 1.03e-267 731.0 COG0535@1|root,COG0535@2|Bacteria,4NHXT@976|Bacteroidetes,2FN32@200643|Bacteroidia,22WJH@171551|Porphyromonadaceae 976|Bacteroidetes C Radical SAM domain protein - - - - - - - - - - - - Fer4_12,Radical_SAM,SPASM BECNEDJF_02565 411477.PARMER_03674 0.0 1216.0 COG3934@1|root,COG3934@2|Bacteria,4NF13@976|Bacteroidetes,2FNPI@200643|Bacteroidia,22X47@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4091) - - - - - - - - - - - - DUF4091 BECNEDJF_02567 411477.PARMER_03672 0.0 866.0 COG1160@1|root,COG1160@2|Bacteria,4NE2J@976|Bacteroidetes,2FN63@200643|Bacteroidia,22VY2@171551|Porphyromonadaceae 976|Bacteroidetes S GTPase that plays an essential role in the late steps of ribosome biogenesis der - - ko:K03977 - - - - ko00000,ko03009 - - - KH_dom-like,MMR_HSR1 BECNEDJF_02568 411477.PARMER_03671 4.03e-207 573.0 COG1159@1|root,COG1159@2|Bacteria,4NES2@976|Bacteroidetes,2FN64@200643|Bacteroidia,22WCP@171551|Porphyromonadaceae 976|Bacteroidetes S An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism era - - ko:K03595 - - - - ko00000,ko03009,ko03029 - - - KH_2,MMR_HSR1 BECNEDJF_02569 411477.PARMER_03670 3.37e-250 685.0 COG0332@1|root,COG0332@2|Bacteria,4NEYH@976|Bacteroidetes,2FM5X@200643|Bacteroidia,22VVW@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids fabH - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C BECNEDJF_02570 411477.PARMER_03669 1.73e-40 133.0 COG0333@1|root,COG0333@2|Bacteria,4NUXU@976|Bacteroidetes,2FUZD@200643|Bacteroidia,22YPG@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL32 family rpmF - - ko:K02911 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011,ko03029 - - - Ribosomal_L32p BECNEDJF_02571 411477.PARMER_03668 7.6e-139 392.0 COG1399@1|root,COG1399@2|Bacteria,4NMQT@976|Bacteroidetes,2FPCJ@200643|Bacteroidia,22XVX@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterized ACR, COG1399 - - - - - - - - - - - - DUF177 BECNEDJF_02572 411477.PARMER_03667 3.47e-266 730.0 COG4191@1|root,COG4191@2|Bacteria,4NEMP@976|Bacteroidetes,2FPJR@200643|Bacteroidia,22VVD@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase vicK - - - - - - - - - - - HATPase_c BECNEDJF_02573 411477.PARMER_01840 0.0 912.0 COG0642@1|root,COG2205@2|Bacteria,4NIC6@976|Bacteroidetes,2FNX0@200643|Bacteroidia,2309I@171551|Porphyromonadaceae 976|Bacteroidetes T His Kinase A (phosphoacceptor) domain - - - - - - - - - - - - HATPase_c,HisKA BECNEDJF_02574 411477.PARMER_01841 5.66e-159 446.0 COG0745@1|root,COG0745@2|Bacteria,4NGNK@976|Bacteroidetes,2FNUC@200643|Bacteroidia,22ZQ4@171551|Porphyromonadaceae 976|Bacteroidetes T COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - - - - - - - - - - - - Response_reg,Trans_reg_C BECNEDJF_02575 411477.PARMER_00531 0.0 2048.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,22W8X@171551|Porphyromonadaceae 976|Bacteroidetes H CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug BECNEDJF_02576 411477.PARMER_00530 0.0 1270.0 COG1435@1|root,COG1435@2|Bacteria,4P1ZS@976|Bacteroidetes,2G099@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02577 411477.PARMER_00529 0.0 1833.0 COG1629@1|root,COG4771@2|Bacteria,4NFFW@976|Bacteroidetes,2FMGS@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - Plug,TonB_dep_Rec BECNEDJF_02578 411477.PARMER_00528 0.0 1160.0 COG1435@1|root,COG1435@2|Bacteria,4NE0A@976|Bacteroidetes,2FM03@200643|Bacteroidia,22WUB@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02579 411477.PARMER_00527 0.0 1027.0 COG5434@1|root,COG5434@2|Bacteria,4NTBW@976|Bacteroidetes,2G2Q6@200643|Bacteroidia 976|Bacteroidetes M Right handed beta helix region - - - - - - - - - - - - Beta_helix BECNEDJF_02580 411477.PARMER_00526 0.0 2542.0 COG0642@1|root,COG0745@1|root,COG3292@1|root,COG0745@2|Bacteria,COG2205@2|Bacteria,COG3292@2|Bacteria,4NDXU@976|Bacteroidetes,2FM2N@200643|Bacteroidia,22WMC@171551|Porphyromonadaceae 976|Bacteroidetes T helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HATPase_c,HTH_18,HisKA,Reg_prop,Response_reg,Y_Y_Y BECNEDJF_02581 999419.HMPREF1077_01534 0.0 1171.0 COG0561@1|root,COG0561@2|Bacteria,4PNXY@976|Bacteroidetes,2G10M@200643|Bacteroidia 976|Bacteroidetes S Pfam:SusD - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_02582 999419.HMPREF1077_01535 1.17e-145 438.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,23234@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02583 411477.PARMER_01511 8.44e-38 137.0 COG2986@1|root,COG2986@2|Bacteria,4NE0D@976|Bacteroidetes,2FMCF@200643|Bacteroidia,22X1Y@171551|Porphyromonadaceae 976|Bacteroidetes E Histidine ammonia-lyase hutH - 4.3.1.3 ko:K01745 ko00340,ko01100,map00340,map01100 M00045 R01168 RC00361 ko00000,ko00001,ko00002,ko01000 - - - Lyase_aromatic BECNEDJF_02584 411477.PARMER_01509 1.03e-264 725.0 COG0489@1|root,COG0489@2|Bacteria,4NF5I@976|Bacteroidetes,2FKYK@200643|Bacteroidia,22WYQ@171551|Porphyromonadaceae 976|Bacteroidetes D Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP mrp - - ko:K03593 - - - - ko00000,ko03029,ko03036 - - - FeS_assembly_P,ParA BECNEDJF_02585 411477.PARMER_01508 1.46e-187 520.0 COG0220@1|root,COG0220@2|Bacteria,4NG4V@976|Bacteroidetes,2FN8Z@200643|Bacteroidia,22WBB@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA trmB GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008176,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016423,GO:0016740,GO:0016741,GO:0030488,GO:0032259,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0034708,GO:0036265,GO:0043170,GO:0043412,GO:0043414,GO:0043527,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0106004,GO:0140098,GO:0140101,GO:1901360,GO:1902494,GO:1990234 2.1.1.33 ko:K03439 - - - - ko00000,ko01000,ko03016 - - - Methyltransf_4 BECNEDJF_02587 435591.BDI_3513 3.94e-222 630.0 COG3316@1|root,COG3316@2|Bacteria,4PKWB@976|Bacteroidetes,2FRWS@200643|Bacteroidia 976|Bacteroidetes L Transposase IS66 family - - - - - - - - - - - - DDE_Tnp_IS66,DDE_Tnp_IS66_C,LZ_Tnp_IS66,zf-IS66 BECNEDJF_02588 1077285.AGDG01000004_gene2337 4.2e-41 139.0 COG3436@1|root,COG3436@2|Bacteria,4NVZA@976|Bacteroidetes,2FSYY@200643|Bacteroidia,4AR6S@815|Bacteroidaceae 976|Bacteroidetes L COG COG3436 Transposase and inactivated derivatives - - - ko:K07484 - - - - ko00000 - - - TnpB_IS66 BECNEDJF_02590 411477.PARMER_02432 5.41e-224 616.0 COG4866@1|root,COG4866@2|Bacteria,4NGJE@976|Bacteroidetes,2FNB2@200643|Bacteroidia,22VZB@171551|Porphyromonadaceae 976|Bacteroidetes S Uncharacterised conserved protein (DUF2156) - - - ko:K01163 - - - - ko00000 - - - Acetyltransf_9,DUF2156 BECNEDJF_02591 411477.PARMER_02431 2.04e-225 621.0 COG4552@1|root,COG4552@2|Bacteria,4NP1R@976|Bacteroidetes,2FPE0@200643|Bacteroidia,22XV1@171551|Porphyromonadaceae 976|Bacteroidetes S Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_9,SCP2_2 BECNEDJF_02593 411477.PARMER_02353 0.0 1414.0 COG0339@1|root,COG0339@2|Bacteria,4NFYA@976|Bacteroidetes,2FNQV@200643|Bacteroidia,22WQA@171551|Porphyromonadaceae 976|Bacteroidetes E Peptidase family M3 - - 3.4.15.5 ko:K01284 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M3 BECNEDJF_02594 411477.PARMER_02354 1.05e-48 157.0 COG3254@1|root,COG3254@2|Bacteria,4NQRF@976|Bacteroidetes,2FSQ6@200643|Bacteroidia,2321D@171551|Porphyromonadaceae 976|Bacteroidetes G Pfam:DUF718 - - 5.1.3.32 ko:K03534 - - R10819 RC00563 ko00000,ko01000 - - - rhaM BECNEDJF_02595 411477.PARMER_02355 3.97e-297 810.0 COG4677@1|root,COG4677@2|Bacteria,4NF12@976|Bacteroidetes,2FM66@200643|Bacteroidia,22XHJ@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF4861) - - 3.1.1.11 ko:K01051 ko00040,ko01100,map00040,map01100 M00081 R02362 RC00460,RC00461 ko00000,ko00001,ko00002,ko01000 - - - DUF4861 BECNEDJF_02596 411477.PARMER_02357 6.16e-138 390.0 COG3525@1|root,COG3525@2|Bacteria,4NDVT@976|Bacteroidetes,2FPR9@200643|Bacteroidia 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Glyco_hydro_20,Glyco_hydro_20b,LRR_5 BECNEDJF_02597 411477.PARMER_02358 0.0 870.0 COG1875@1|root,COG1875@2|Bacteria,4NDUI@976|Bacteroidetes,2FP3H@200643|Bacteroidia,22W36@171551|Porphyromonadaceae 976|Bacteroidetes T Phosphate starvation protein PhoH ybeZ_1 - - ko:K07175 - - - - ko00000 - - - PIN_4,PhoH BECNEDJF_02598 411477.PARMER_02359 1.53e-82 243.0 2DMZP@1|root,32UMQ@2|Bacteria,4P3H1@976|Bacteroidetes,2FT4E@200643|Bacteroidia,230IW@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3795) - - - - - - - - - - - - DUF3795 BECNEDJF_02599 411477.PARMER_02360 1.97e-107 310.0 COG2839@1|root,COG2839@2|Bacteria,4NNIY@976|Bacteroidetes,2FS52@200643|Bacteroidia,22YAI@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF456) - - - ko:K09793 - - - - ko00000 - - - DUF456 BECNEDJF_02600 411477.PARMER_02361 4.48e-117 334.0 COG2050@1|root,COG2050@2|Bacteria,4NRF7@976|Bacteroidetes,2G31E@200643|Bacteroidia,22YDT@171551|Porphyromonadaceae 976|Bacteroidetes Q Thioesterase superfamily - - - - - - - - - - - - 4HBT BECNEDJF_02601 411477.PARMER_02362 5.53e-205 566.0 COG0648@1|root,COG0648@2|Bacteria,4NJDP@976|Bacteroidetes,2FPM6@200643|Bacteroidia,22WPU@171551|Porphyromonadaceae 976|Bacteroidetes L Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin nfo GO:0003674,GO:0003824,GO:0003906,GO:0006139,GO:0006259,GO:0006281,GO:0006284,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0008081,GO:0008150,GO:0008152,GO:0009987,GO:0016787,GO:0016788,GO:0033554,GO:0034641,GO:0042578,GO:0043170,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0050896,GO:0051716,GO:0071704,GO:0090304,GO:0140097,GO:1901360 3.1.21.2 ko:K01151 ko03410,map03410 - - - ko00000,ko00001,ko01000,ko03400 - - - AP_endonuc_2 BECNEDJF_02602 411477.PARMER_02363 0.0 905.0 COG1055@1|root,COG1055@2|Bacteria,4P1MF@976|Bacteroidetes,2FXAM@200643|Bacteroidia,22ZNM@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - CitMHS BECNEDJF_02603 411477.PARMER_02364 0.0 1124.0 COG4690@1|root,COG4690@2|Bacteria,4NE03@976|Bacteroidetes,2FPSX@200643|Bacteroidia,22WBK@171551|Porphyromonadaceae 976|Bacteroidetes M Dipeptidase - - - - - - - - - - - - Peptidase_C69 BECNEDJF_02604 411477.PARMER_02365 2.07e-104 302.0 COG3637@1|root,COG3637@2|Bacteria,4NXWX@976|Bacteroidetes,2FRFV@200643|Bacteroidia,22YTA@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl BECNEDJF_02605 411477.PARMER_02366 2.82e-151 426.0 COG0637@1|root,COG0637@2|Bacteria,4NEEH@976|Bacteroidetes,2FM7C@200643|Bacteroidia,22Y09@171551|Porphyromonadaceae 976|Bacteroidetes S Haloacid dehalogenase-like hydrolase pgmB - - - - - - - - - - - HAD_2 BECNEDJF_02606 411477.PARMER_02367 0.0 971.0 COG1082@1|root,COG2152@1|root,COG1082@2|Bacteria,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,2FP8T@200643|Bacteroidia,22VZ2@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 BECNEDJF_02608 411477.PARMER_00916 3.01e-131 372.0 COG0671@1|root,COG0671@2|Bacteria,4NP0U@976|Bacteroidetes,2G39R@200643|Bacteroidia,22Y5F@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - - - - - - - - - - - - PAP2 BECNEDJF_02610 411477.PARMER_00912 3.23e-22 90.9 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FPST@200643|Bacteroidia,22WS2@171551|Porphyromonadaceae 976|Bacteroidetes V ABC transporter, ATP-binding protein ytrE_3 - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran BECNEDJF_02611 411477.PARMER_00395 0.0 1222.0 COG1413@1|root,COG1413@2|Bacteria,4NEZ7@976|Bacteroidetes,2FPRF@200643|Bacteroidia,22X0G@171551|Porphyromonadaceae 976|Bacteroidetes C Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080,HEAT_2 BECNEDJF_02612 435591.BDI_3927 8.74e-18 84.3 COG0380@1|root,COG1877@1|root,COG0380@2|Bacteria,COG1877@2|Bacteria,4NGJ4@976|Bacteroidetes,2FN4R@200643|Bacteroidia,22XH5@171551|Porphyromonadaceae 976|Bacteroidetes G Trehalose-phosphatase otsB - 2.4.1.15,3.1.3.12 ko:K16055 ko00500,ko01100,map00500,map01100 - R02737,R02778 RC00005,RC00017,RC00049,RC02748 ko00000,ko00001,ko01000,ko01003 - GT20 - Glyco_transf_20,Trehalose_PPase BECNEDJF_02615 411477.PARMER_01553 3.44e-253 704.0 COG2071@1|root,COG2355@1|root,COG2071@2|Bacteria,COG2355@2|Bacteria,4NEBG@976|Bacteroidetes,2FMPY@200643|Bacteroidia,22X2P@171551|Porphyromonadaceae 976|Bacteroidetes E Membrane dipeptidase (Peptidase family M19) - - 3.4.13.19 ko:K01273,ko:K01274 - - - - ko00000,ko00537,ko01000,ko01002,ko04147 - - - Peptidase_C26,Peptidase_M19 BECNEDJF_02616 411477.PARMER_01554 7.92e-248 679.0 COG2234@1|root,COG2234@2|Bacteria,4NG2A@976|Bacteroidetes,2FN1C@200643|Bacteroidia,22X6Y@171551|Porphyromonadaceae 976|Bacteroidetes S Glutamine cyclotransferase - - - - - - - - - - - - Peptidase_M28 BECNEDJF_02617 411477.PARMER_01991 8.71e-281 766.0 COG4299@1|root,COG4299@2|Bacteria,4NGKU@976|Bacteroidetes,2FNH7@200643|Bacteroidia,22WI6@171551|Porphyromonadaceae 976|Bacteroidetes S COGs COG4299 conserved - - - - - - - - - - - - DUF5009 BECNEDJF_02619 411477.PARMER_01855 3.57e-81 241.0 COG0251@1|root,COG0251@2|Bacteria,4NQ8M@976|Bacteroidetes,2FT8J@200643|Bacteroidia,22YB1@171551|Porphyromonadaceae 976|Bacteroidetes J Has endoribonuclease activity on mRNA - - 3.5.99.10 ko:K09022 - - R11098,R11099 RC03275,RC03354 ko00000,ko01000 - - - Ribonuc_L-PSP BECNEDJF_02620 999419.HMPREF1077_02762 2.78e-170 476.0 COG0566@1|root,COG0566@2|Bacteria,4NF6H@976|Bacteroidetes,2FMSI@200643|Bacteroidia,22X8Y@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family trmH - 2.1.1.185 ko:K03218,ko:K03437 - - - - ko00000,ko01000,ko03009,ko03016 - - - SpoU_methylase,SpoU_sub_bind BECNEDJF_02621 411477.PARMER_01857 8.9e-96 279.0 2C5N5@1|root,32XD8@2|Bacteria,4PQ0Y@976|Bacteroidetes,2G1BD@200643|Bacteroidia,230ZX@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02623 411477.PARMER_01860 0.0 999.0 COG0497@1|root,COG0497@2|Bacteria,4NE3I@976|Bacteroidetes,2FMIG@200643|Bacteroidia,22W29@171551|Porphyromonadaceae 976|Bacteroidetes L May be involved in recombinational repair of damaged DNA recN - - ko:K03631 - - - - ko00000,ko03400 - - - SMC_N BECNEDJF_02624 411477.PARMER_01861 6.21e-213 588.0 28HA8@1|root,2Z7MQ@2|Bacteria,4NEJD@976|Bacteroidetes,2FP92@200643|Bacteroidia,22WNR@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4835) - - - - - - - - - - - - DUF4835 BECNEDJF_02625 999419.HMPREF1077_02756 4.78e-271 745.0 COG0452@1|root,COG0452@2|Bacteria,4NE46@976|Bacteroidetes,2FNDG@200643|Bacteroidia,22X4T@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine coaBC - 4.1.1.36,6.3.2.5 ko:K13038 ko00770,ko01100,map00770,map01100 M00120 R03269,R04231 RC00064,RC00090,RC00822 ko00000,ko00001,ko00002,ko01000 - - - DFP,Flavoprotein BECNEDJF_02626 411477.PARMER_01863 5.88e-278 759.0 COG1979@1|root,COG1979@2|Bacteria,4NF1D@976|Bacteroidetes,2FPAW@200643|Bacteroidia,22W7C@171551|Porphyromonadaceae 976|Bacteroidetes C alcohol dehydrogenase yqhD - - ko:K08325 ko00640,map00640 - R02528 RC00739 ko00000,ko00001,ko01000 - - - Fe-ADH BECNEDJF_02627 411477.PARMER_01864 4e-187 519.0 COG0847@1|root,COG0847@2|Bacteria,4NE82@976|Bacteroidetes,2FMQF@200643|Bacteroidia,22WYR@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III subunit epsilon dnaQ - 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - RNase_T BECNEDJF_02628 411477.PARMER_01865 1.7e-261 717.0 COG0592@1|root,COG0592@2|Bacteria,4NESB@976|Bacteroidetes,2FMPF@200643|Bacteroidia,22X93@171551|Porphyromonadaceae 976|Bacteroidetes L Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria dnaN - 2.7.7.7 ko:K02338 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_beta,DNA_pol3_beta_2,DNA_pol3_beta_3 BECNEDJF_02629 1235803.C825_04915 1.58e-27 99.8 2E359@1|root,32Y58@2|Bacteria,4NUXM@976|Bacteroidetes,2FUJX@200643|Bacteroidia,22YQ0@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4295) - - - - - - - - - - - - DUF4295 BECNEDJF_02630 411477.PARMER_01868 2.46e-36 122.0 COG0267@1|root,COG0267@2|Bacteria,4NURM@976|Bacteroidetes,2FTST@200643|Bacteroidia,22YNB@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL33 family rpmG - - ko:K02913 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L33 BECNEDJF_02631 411477.PARMER_01869 1.27e-50 160.0 COG0227@1|root,COG0227@2|Bacteria,4NS7Q@976|Bacteroidetes,2FTTQ@200643|Bacteroidia,22YGD@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the bacterial ribosomal protein bL28 family rpmB GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02902 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L28 BECNEDJF_02632 411477.PARMER_01871 4.28e-292 798.0 COG1807@1|root,COG1807@2|Bacteria,4NWIP@976|Bacteroidetes,2FUZZ@200643|Bacteroidia 976|Bacteroidetes M 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family - - - - - - - - - - - - PMT_2 BECNEDJF_02633 411477.PARMER_01872 1.47e-143 404.0 COG3560@1|root,COG3560@2|Bacteria,4NJPC@976|Bacteroidetes,2FMUS@200643|Bacteroidia,22Z8F@171551|Porphyromonadaceae 976|Bacteroidetes S Nitroreductase family - - - ko:K07078 - - - - ko00000 - - - Nitroreductase BECNEDJF_02634 411477.PARMER_01873 0.0 871.0 COG1249@1|root,COG1249@2|Bacteria,4NDVC@976|Bacteroidetes,2FM8Y@200643|Bacteroidia,22WRR@171551|Porphyromonadaceae 976|Bacteroidetes C Dihydrolipoyl dehydrogenase lpdA - 1.8.1.4 ko:K00382 ko00010,ko00020,ko00260,ko00280,ko00620,ko00630,ko00640,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00020,map00260,map00280,map00620,map00630,map00640,map01100,map01110,map01120,map01130,map01200 M00009,M00011,M00036,M00307,M00532 R00209,R01221,R01698,R03815,R07618,R08549 RC00004,RC00022,RC00583,RC02742,RC02833,RC02834 br01601,ko00000,ko00001,ko00002,ko01000,ko04147 - - - Pyr_redox_2,Pyr_redox_dim BECNEDJF_02635 411477.PARMER_01874 8.7e-177 492.0 COG0095@1|root,COG0095@2|Bacteria,4NE5F@976|Bacteroidetes,2FMDJ@200643|Bacteroidia,22Y4W@171551|Porphyromonadaceae 976|Bacteroidetes H Lipoate-protein ligase lplA - 6.3.1.20 ko:K03800 ko00785,ko01100,map00785,map01100 - R07770,R07771,R11143 RC00043,RC00070,RC00090,RC00992,RC02896 ko00000,ko00001,ko01000 - - - BPL_LplA_LipB,Lip_prot_lig_C BECNEDJF_02636 999419.HMPREF1077_00087 3.55e-38 131.0 COG0712@1|root,COG0712@2|Bacteria,4NSNF@976|Bacteroidetes,2FQZ5@200643|Bacteroidia,22YFG@171551|Porphyromonadaceae 976|Bacteroidetes C F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation atpH - - ko:K02113 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194 3.A.2.1 - - OSCP BECNEDJF_02637 411477.PARMER_00017 0.0 1008.0 COG0056@1|root,COG0056@2|Bacteria,4NFZW@976|Bacteroidetes,2FM4H@200643|Bacteroidia,22WEQ@171551|Porphyromonadaceae 976|Bacteroidetes C Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit atpA - 3.6.3.14 ko:K02111 ko00190,ko00195,ko01100,map00190,map00195,map01100 M00157 - - ko00000,ko00001,ko00002,ko00194,ko01000 3.A.2.1 - - ATP-synt_ab,ATP-synt_ab_C,ATP-synt_ab_N BECNEDJF_02638 411477.PARMER_00524 2.46e-172 482.0 COG0159@1|root,COG0159@2|Bacteria,4NE21@976|Bacteroidetes,2FPFP@200643|Bacteroidia,22W9T@171551|Porphyromonadaceae 976|Bacteroidetes E The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3- phosphate trpA - 4.2.1.20 ko:K01695 ko00260,ko00400,ko01100,ko01110,ko01130,ko01230,map00260,map00400,map01100,map01110,map01130,map01230 M00023 R00674,R02340,R02722 RC00209,RC00210,RC00700,RC00701,RC02868 ko00000,ko00001,ko00002,ko01000 - - - Trp_syntA BECNEDJF_02639 999419.HMPREF1077_03652 5.23e-89 268.0 COG2207@1|root,COG2207@2|Bacteria,4NMRA@976|Bacteroidetes,2FN76@200643|Bacteroidia 976|Bacteroidetes K transcriptional regulator (AraC family) thiD - 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - HTH_18,Phos_pyr_kin BECNEDJF_02641 411477.PARMER_02783 5.43e-185 514.0 COG3279@1|root,COG3279@2|Bacteria,4NRFD@976|Bacteroidetes,2FM05@200643|Bacteroidia,22Y7Y@171551|Porphyromonadaceae 976|Bacteroidetes KT LytTr DNA-binding domain - - - - - - - - - - - - LytTR BECNEDJF_02642 411477.PARMER_02782 4.33e-185 514.0 COG4758@1|root,COG4758@2|Bacteria,4NQRE@976|Bacteroidetes,2FMXH@200643|Bacteroidia,22YB9@171551|Porphyromonadaceae 976|Bacteroidetes S Cell wall-active antibiotics response 4TMS YvqF - - - - - - - - - - - - DUF2154 BECNEDJF_02643 504472.Slin_4979 0.0 939.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,47Y7D@768503|Cytophagia 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02644 471854.Dfer_2403 9.96e-280 781.0 COG0457@1|root,COG0457@2|Bacteria,4NDX0@976|Bacteroidetes,47N2U@768503|Cytophagia 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02645 411477.PARMER_04401 3.01e-84 249.0 COG3279@1|root,COG3279@2|Bacteria,4NZ6I@976|Bacteroidetes,2FUMY@200643|Bacteroidia,22YXF@171551|Porphyromonadaceae 976|Bacteroidetes K LytTr DNA-binding domain - - - - - - - - - - - - LytTR BECNEDJF_02646 411477.PARMER_04402 3.72e-159 445.0 COG1716@1|root,COG1716@2|Bacteria,4NVZX@976|Bacteroidetes,2FVZR@200643|Bacteroidia,23024@171551|Porphyromonadaceae 976|Bacteroidetes T Inner membrane component of T3SS, cytoplasmic domain - - - - - - - - - - - - FHA BECNEDJF_02648 411477.PARMER_04404 1.11e-117 337.0 COG1716@1|root,COG1716@2|Bacteria,4NU70@976|Bacteroidetes,2FW38@200643|Bacteroidia,231D9@171551|Porphyromonadaceae 976|Bacteroidetes T FHA domain - - - - - - - - - - - - FHA BECNEDJF_02649 411477.PARMER_04405 1.24e-191 531.0 COG0631@1|root,COG0631@2|Bacteria,4NUGP@976|Bacteroidetes,2FUFR@200643|Bacteroidia,2311X@171551|Porphyromonadaceae 976|Bacteroidetes T Serine/threonine phosphatases, family 2C, catalytic domain - - 3.1.3.16 ko:K20074 - - - - ko00000,ko01000,ko01009 - - - PP2C_2 BECNEDJF_02650 411477.PARMER_04406 0.0 1144.0 COG0515@1|root,COG0515@2|Bacteria,4NMTE@976|Bacteroidetes,2FS85@200643|Bacteroidia,22Z0F@171551|Porphyromonadaceae 976|Bacteroidetes KLT Protein tyrosine kinase - - 2.7.11.1 ko:K12132 - - - - ko00000,ko01000,ko01001 - - - Pkinase BECNEDJF_02651 411477.PARMER_04407 5.84e-237 650.0 COG0790@1|root,COG0790@2|Bacteria,4NZQT@976|Bacteroidetes,2FWAZ@200643|Bacteroidia,22ZCQ@171551|Porphyromonadaceae 976|Bacteroidetes S COG0790 FOG TPR repeat, SEL1 subfamily - - - - - - - - - - - - PEGA BECNEDJF_02652 411477.PARMER_04408 0.0 1447.0 COG3055@1|root,COG3055@2|Bacteria,4PKTP@976|Bacteroidetes,2G0HP@200643|Bacteroidia,2324F@171551|Porphyromonadaceae 976|Bacteroidetes S Fibronectin type 3 domain - - - - - - - - - - - - Kelch_1 BECNEDJF_02653 411477.PARMER_04409 1.79e-214 592.0 COG1045@1|root,COG1045@2|Bacteria,4NGZ7@976|Bacteroidetes,2FM9U@200643|Bacteroidia,22XAZ@171551|Porphyromonadaceae 976|Bacteroidetes E Serine acetyltransferase cysE - 2.3.1.30 ko:K00640 ko00270,ko00920,ko01100,ko01110,ko01120,ko01200,ko01230,ko05111,map00270,map00920,map01100,map01110,map01120,map01200,map01230,map05111 M00021 R00586 RC00004,RC00041 ko00000,ko00001,ko00002,ko01000 - - - Hexapep,SATase_N BECNEDJF_02654 411477.PARMER_04410 1.87e-88 259.0 COG3411@1|root,COG3411@2|Bacteria,4NQQ2@976|Bacteroidetes,2FTGH@200643|Bacteroidia,22Y5H@171551|Porphyromonadaceae 976|Bacteroidetes C Ferredoxin - - 1.12.1.3 ko:K17992 - - - - ko00000,ko01000 - - - - BECNEDJF_02656 411477.PARMER_02813 4.31e-44 143.0 COG0236@1|root,COG0236@2|Bacteria,4NS6C@976|Bacteroidetes,2FTWG@200643|Bacteroidia,22YF4@171551|Porphyromonadaceae 976|Bacteroidetes IQ Carrier of the growing fatty acid chain in fatty acid biosynthesis acpP GO:0000035,GO:0000036,GO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005975,GO:0006082,GO:0006629,GO:0006631,GO:0006633,GO:0006643,GO:0006644,GO:0006664,GO:0006793,GO:0006796,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009245,GO:0009247,GO:0009311,GO:0009312,GO:0009987,GO:0016051,GO:0016053,GO:0019637,GO:0019752,GO:0019842,GO:0031177,GO:0032787,GO:0033218,GO:0036094,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0044620,GO:0046394,GO:0046467,GO:0046493,GO:0048037,GO:0051192,GO:0071704,GO:0072330,GO:0072341,GO:0090407,GO:0140104,GO:1901135,GO:1901137,GO:1901269,GO:1901271,GO:1901576,GO:1903509 - ko:K02078 - - - - ko00000,ko00001 - - - PP-binding BECNEDJF_02657 411477.PARMER_02812 1.03e-304 830.0 COG0304@1|root,COG0304@2|Bacteria,4NEKC@976|Bacteroidetes,2FNDB@200643|Bacteroidia,22W73@171551|Porphyromonadaceae 976|Bacteroidetes I Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP fabF - 2.3.1.179 ko:K09458 ko00061,ko00780,ko01100,ko01212,map00061,map00780,map01100,map01212 M00083,M00572 R04355,R04726,R04952,R04957,R04960,R04963,R04968,R07762,R10115,R10119 RC00039,RC02728,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - Ketoacyl-synt_C,ketoacyl-synt BECNEDJF_02658 411477.PARMER_02811 2.84e-199 553.0 COG0571@1|root,COG0571@2|Bacteria,4NE0N@976|Bacteroidetes,2FMV3@200643|Bacteroidia,22W54@171551|Porphyromonadaceae 976|Bacteroidetes J Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre- crRNA and tracrRNA of type II CRISPR loci if present in the organism rnc GO:0003674,GO:0003676,GO:0003723,GO:0003725,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004525,GO:0004540,GO:0005488,GO:0006139,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016787,GO:0016788,GO:0016891,GO:0016893,GO:0032296,GO:0034641,GO:0043170,GO:0044237,GO:0044238,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0090501,GO:0090502,GO:0097159,GO:0140098,GO:1901360,GO:1901363 3.1.26.3 ko:K03685 ko03008,ko05205,map03008,map05205 - - - ko00000,ko00001,ko01000,ko03009,ko03019,ko03036 - - - Ribonucleas_3_3,dsrm BECNEDJF_02659 411477.PARMER_02810 2.64e-244 671.0 COG0205@1|root,COG0205@2|Bacteria,4NGN7@976|Bacteroidetes,2FNIF@200643|Bacteroidia,22X1H@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis pfkA - 2.7.1.11,2.7.1.90 ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK BECNEDJF_02660 411477.PARMER_02809 0.0 1032.0 COG1541@1|root,COG1541@2|Bacteria,4NFRI@976|Bacteroidetes,2FMJX@200643|Bacteroidia,22WCF@171551|Porphyromonadaceae 976|Bacteroidetes H GH3 auxin-responsive promoter - - - - - - - - - - - - GH3 BECNEDJF_02661 411477.PARMER_02808 3.45e-198 548.0 COG0671@1|root,COG0671@2|Bacteria,4NJEX@976|Bacteroidetes,2G39P@200643|Bacteroidia,22XX7@171551|Porphyromonadaceae 976|Bacteroidetes I Acid phosphatase homologues - - - - - - - - - - - - PAP2 BECNEDJF_02662 411477.PARMER_02807 3.73e-269 736.0 COG0075@1|root,COG0075@2|Bacteria,4NH61@976|Bacteroidetes,2FP5I@200643|Bacteroidia,22X2A@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily phnW - 2.6.1.37 ko:K03430 ko00440,ko01100,ko01120,map00440,map01100,map01120 - R04152 RC00008,RC00062 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_5 BECNEDJF_02663 411477.PARMER_02806 1.98e-190 528.0 COG0637@1|root,COG0637@2|Bacteria,4NIYB@976|Bacteroidetes,2FM33@200643|Bacteroidia,22WA4@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the HAD-like hydrolase superfamily. PhnX family phnX - 3.11.1.1 ko:K05306 ko00440,ko01100,ko01120,map00440,map01100,map01120 - R00747 RC00368 ko00000,ko00001,ko01000 - - - HAD_2 BECNEDJF_02664 411477.PARMER_02805 7.47e-314 856.0 2C31A@1|root,2Z7UP@2|Bacteria,4NECU@976|Bacteroidetes,2FPEI@200643|Bacteroidia,22VWH@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - BECNEDJF_02665 999419.HMPREF1077_01489 7.71e-200 554.0 28IAJ@1|root,2Z8D5@2|Bacteria,4NJNA@976|Bacteroidetes,2FQ8K@200643|Bacteroidia,22WD2@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02666 411477.PARMER_02803 0.0 1394.0 COG0306@1|root,COG0306@2|Bacteria,4NFCB@976|Bacteroidetes,2FN8Q@200643|Bacteroidia,22WHP@171551|Porphyromonadaceae 976|Bacteroidetes U Phosphate transporter - - - - - - - - - - - - PHO4 BECNEDJF_02667 411477.PARMER_02802 5.18e-128 364.0 COG1595@1|root,COG1595@2|Bacteria,4NR0P@976|Bacteroidetes,2FN1H@200643|Bacteroidia 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02668 411477.PARMER_02801 1.17e-220 610.0 COG3712@1|root,COG3712@2|Bacteria,4NMA2@976|Bacteroidetes,2FXKB@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_02669 742727.HMPREF9447_03500 0.0 963.0 COG3666@1|root,COG3666@2|Bacteria,4NEDD@976|Bacteroidetes,2FNIQ@200643|Bacteroidia,4AKE2@815|Bacteroidaceae 976|Bacteroidetes L COG COG3666 Transposase and inactivated derivatives - - - - - - - - - - - - DDE_Tnp_1_6,DUF772 BECNEDJF_02671 411477.PARMER_04221 0.0 1197.0 COG0457@1|root,COG0507@1|root,COG0457@2|Bacteria,COG0507@2|Bacteria,4NF6J@976|Bacteroidetes,2FM19@200643|Bacteroidia,22X68@171551|Porphyromonadaceae 976|Bacteroidetes L COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member - - - - - - - - - - - - Herpes_Helicase,PIF1,TPR_16,TPR_2,TPR_8 BECNEDJF_02672 411477.PARMER_04222 6.34e-197 547.0 COG0330@1|root,COG0330@2|Bacteria,4NEBV@976|Bacteroidetes,2FPV3@200643|Bacteroidia,22WRS@171551|Porphyromonadaceae 976|Bacteroidetes O prohibitin homologues - - - - - - - - - - - - Band_7 BECNEDJF_02673 411477.PARMER_04223 1.11e-37 126.0 COG4877@1|root,COG4877@2|Bacteria,4NXSU@976|Bacteroidetes,2FUU4@200643|Bacteroidia,22YTT@171551|Porphyromonadaceae 976|Bacteroidetes S Arc-like DNA binding domain - - - - - - - - - - - - Arc,RHH_5 BECNEDJF_02674 411477.PARMER_04224 1.63e-236 651.0 COG3147@1|root,COG3147@2|Bacteria,4PKTI@976|Bacteroidetes,2FQ1W@200643|Bacteroidia,22YHW@171551|Porphyromonadaceae 976|Bacteroidetes S Sporulation and cell division repeat protein - - - - - - - - - - - - SPOR BECNEDJF_02675 411477.PARMER_04225 1.97e-258 707.0 COG1063@1|root,COG1063@2|Bacteria,4NE11@976|Bacteroidetes,2FNP5@200643|Bacteroidia,22WVA@171551|Porphyromonadaceae 976|Bacteroidetes E COG1063 Threonine dehydrogenase and related Zn-dependent yjmD_2 - - ko:K18369 ko00640,map00640 - R10703 RC00545 ko00000,ko00001,ko01000 - - - ADH_N,ADH_N_assoc,ADH_zinc_N,ADH_zinc_N_2 BECNEDJF_02676 411477.PARMER_04226 3.56e-192 533.0 COG0566@1|root,COG0566@2|Bacteria,4NEFJ@976|Bacteroidetes,2FMWP@200643|Bacteroidia,23039@171551|Porphyromonadaceae 976|Bacteroidetes J SpoU rRNA Methylase family spoU - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind BECNEDJF_02677 411477.PARMER_04227 1.36e-205 568.0 COG1028@1|root,COG1028@2|Bacteria,4NKYV@976|Bacteroidetes,2FNI3@200643|Bacteroidia,22Z6A@171551|Porphyromonadaceae 976|Bacteroidetes IQ Enoyl-(Acyl carrier protein) reductase - - - - - - - - - - - - adh_short_C2 BECNEDJF_02678 411477.PARMER_04229 0.0 1085.0 COG0564@1|root,COG0564@2|Bacteria,4NE9B@976|Bacteroidetes,2FP72@200643|Bacteroidia,22ZHI@171551|Porphyromonadaceae 976|Bacteroidetes J RNA pseudouridylate synthase rluA - 5.4.99.28,5.4.99.29 ko:K06177 - - - - ko00000,ko01000,ko03009,ko03016 - - - PseudoU_synth_2 BECNEDJF_02680 411477.PARMER_04230 0.0 1083.0 COG3507@1|root,COG3507@2|Bacteria,4NJ7K@976|Bacteroidetes,2FPFY@200643|Bacteroidia,22XK4@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 BECNEDJF_02682 411477.PARMER_04232 7.74e-83 244.0 2E4R1@1|root,32ZJK@2|Bacteria,4NT8J@976|Bacteroidetes,2FU1N@200643|Bacteroidia,22YJZ@171551|Porphyromonadaceae 976|Bacteroidetes S Nitrous oxide-stimulated promoter - - - - - - - - - - - - YgbA_NO BECNEDJF_02683 411477.PARMER_04233 9.03e-229 629.0 COG0454@1|root,COG0456@2|Bacteria,4NRHS@976|Bacteroidetes,2FTCT@200643|Bacteroidia,22Y54@171551|Porphyromonadaceae 976|Bacteroidetes K GNAT family acetyltransferase - - 2.3.1.82 ko:K18815 - - - - br01600,ko00000,ko01000,ko01504 - - - Acetyltransf_1,Acetyltransf_10,Acetyltransf_7 BECNEDJF_02684 1121098.HMPREF1534_02911 1.37e-61 190.0 2D42G@1|root,33VZP@2|Bacteria,4P3Q4@976|Bacteroidetes,2FT43@200643|Bacteroidia,4ARC3@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_17 BECNEDJF_02685 449673.BACSTE_03025 2.96e-61 188.0 2DVNY@1|root,33WJZ@2|Bacteria,4P30M@976|Bacteroidetes,2FTC4@200643|Bacteroidia,4ARJU@815|Bacteroidaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - HTH_17 BECNEDJF_02686 1122971.BAME01000022_gene2409 8.76e-63 192.0 2CD08@1|root,33VZH@2|Bacteria,4P37Y@976|Bacteroidetes,2FT48@200643|Bacteroidia,230E7@171551|Porphyromonadaceae 976|Bacteroidetes L Helix-turn-helix domain - - - - - - - - - - - - HTH_17 BECNEDJF_02687 411477.PARMER_04398 0.0 1347.0 COG0045@1|root,COG1042@1|root,COG0045@2|Bacteria,COG1042@2|Bacteria,4NFTI@976|Bacteroidetes,2FNSJ@200643|Bacteroidia,22WFU@171551|Porphyromonadaceae 976|Bacteroidetes C CoA ligase - - - ko:K09181 - - - - ko00000 - - - ATP-grasp_5,CoA_binding_2,Succ_CoA_lig BECNEDJF_02688 1235813.JCM10003_335 2.58e-227 626.0 COG0358@1|root,COG0358@2|Bacteria,4NH5X@976|Bacteroidetes,2FPHT@200643|Bacteroidia,4AKC7@815|Bacteroidaceae 976|Bacteroidetes L Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - Toprim_2,zf-CHC2 BECNEDJF_02689 1235813.JCM10003_334 7.64e-57 185.0 COG0467@1|root,COG0467@2|Bacteria,4NIAQ@976|Bacteroidetes,2FMJT@200643|Bacteroidia,4AKM8@815|Bacteroidaceae 976|Bacteroidetes T COG NOG25714 non supervised orthologous group - - - - - - - - - - - - AAA_25 BECNEDJF_02690 411477.PARMER_00057 1.24e-172 488.0 COG0467@1|root,COG0467@2|Bacteria,4NIAQ@976|Bacteroidetes,2FMJT@200643|Bacteroidia,22X4M@171551|Porphyromonadaceae 976|Bacteroidetes T AAA domain - - - - - - - - - - - - AAA_25 BECNEDJF_02691 411477.PARMER_04092 1.43e-29 115.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2G3FU@200643|Bacteroidia,2324D@171551|Porphyromonadaceae 976|Bacteroidetes P Psort location OuterMembrane, score - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02692 411477.PARMER_04093 0.0 931.0 COG3193@1|root,COG3193@2|Bacteria,4NHC0@976|Bacteroidetes,2FNQR@200643|Bacteroidia,2324E@171551|Porphyromonadaceae 976|Bacteroidetes S SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02693 411477.PARMER_04094 4.31e-279 762.0 COG1672@1|root,COG1672@2|Bacteria,4NGM3@976|Bacteroidetes,2FM92@200643|Bacteroidia,22WF5@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:Arch_ATPase - - - ko:K06921 - - - - ko00000 - - - ATPase_2 BECNEDJF_02694 411477.PARMER_04095 0.0 1968.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM37@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02695 411477.PARMER_04096 0.0 1061.0 COG2956@1|root,COG2956@2|Bacteria,4PKB7@976|Bacteroidetes,2G0HM@200643|Bacteroidia 976|Bacteroidetes G SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02696 411477.PARMER_04097 6.68e-205 567.0 2DVAF@1|root,33V17@2|Bacteria,4P2JG@976|Bacteroidetes,2FSVS@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02697 411477.PARMER_04098 0.0 988.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 BECNEDJF_02698 411477.PARMER_04099 0.0 1158.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - BECNEDJF_02699 411477.PARMER_04100 0.0 964.0 COG1119@1|root,COG1119@2|Bacteria,4NEWY@976|Bacteroidetes,2FMN3@200643|Bacteroidia,22X6F@171551|Porphyromonadaceae 976|Bacteroidetes P ATPases associated with a variety of cellular activities modF - - ko:K05776 ko02010,map02010 M00189 - - ko00000,ko00001,ko00002,ko02000 - - - ABC_tran BECNEDJF_02700 411477.PARMER_04101 1.01e-175 490.0 COG0548@1|root,COG0548@2|Bacteria,4NDY8@976|Bacteroidetes,2FN66@200643|Bacteroidia,22VYC@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the acetylglutamate kinase family. ArgB subfamily argB GO:0003674,GO:0003824,GO:0003991,GO:0005488,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016597,GO:0016740,GO:0016772,GO:0016774,GO:0019752,GO:0031406,GO:0034618,GO:0036094,GO:0043167,GO:0043168,GO:0043169,GO:0043177,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.8 ko:K00930 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028 R02649 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase BECNEDJF_02702 411477.PARMER_03336 6.74e-209 577.0 COG2152@1|root,COG2152@2|Bacteria,4NGDZ@976|Bacteroidetes,2FPFW@200643|Bacteroidia,22WNS@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of Unknown Function (DUF1080) - - - - - - - - - - - - DUF1080 BECNEDJF_02703 411477.PARMER_03337 1.72e-236 654.0 COG3595@1|root,COG3595@2|Bacteria,4NEUW@976|Bacteroidetes,2FV2Q@200643|Bacteroidia,22YZE@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02704 411477.PARMER_03338 1.33e-124 355.0 2EPCT@1|root,33GZF@2|Bacteria,4NZ8X@976|Bacteroidetes,2FVPB@200643|Bacteroidia,22Z27@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02705 411477.PARMER_03339 3.14e-127 362.0 COG1595@1|root,COG1595@2|Bacteria,4NFXX@976|Bacteroidetes,2FTUP@200643|Bacteroidia,22YDU@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02706 1235803.C825_04737 1.37e-59 195.0 2C09N@1|root,2Z82F@2|Bacteria,4NF07@976|Bacteroidetes,2FPES@200643|Bacteroidia,22XCC@171551|Porphyromonadaceae 976|Bacteroidetes S NigD-like N-terminal OB domain - - - - - - - - - - - - NigD_C,NigD_N BECNEDJF_02707 411477.PARMER_03341 7.12e-276 754.0 COG0763@1|root,COG0763@2|Bacteria,4NDW3@976|Bacteroidetes,2FPE5@200643|Bacteroidia,22WGC@171551|Porphyromonadaceae 976|Bacteroidetes M Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell lpxB - 2.4.1.182 ko:K00748 ko00540,ko01100,map00540,map01100 M00060 R04606 RC00005,RC00059 ko00000,ko00001,ko00002,ko01000,ko01003,ko01005 - GT19 - LpxB BECNEDJF_02708 411477.PARMER_03342 3.16e-187 520.0 COG0496@1|root,COG0496@2|Bacteria,4NEJ5@976|Bacteroidetes,2FMRR@200643|Bacteroidia,22WSZ@171551|Porphyromonadaceae 976|Bacteroidetes S Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates surE - 3.1.3.5 ko:K03787 ko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110 - R00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346 RC00017 ko00000,ko00001,ko01000 - - - SurE BECNEDJF_02709 411477.PARMER_03343 8.06e-176 489.0 COG0745@1|root,COG0745@2|Bacteria,4NF1I@976|Bacteroidetes,2FNZV@200643|Bacteroidia,22WBV@171551|Porphyromonadaceae 976|Bacteroidetes K COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain rprY - - - - - - - - - - - Response_reg,Trans_reg_C BECNEDJF_02710 411477.PARMER_03344 0.0 996.0 COG0642@1|root,COG2205@2|Bacteria,4NEFW@976|Bacteroidetes,2FPG5@200643|Bacteroidia,22WQ1@171551|Porphyromonadaceae 976|Bacteroidetes T ATPase histidine kinase DNA gyrase B HSP90 domain protein - - 2.7.13.3 ko:K07636 ko02020,map02020 M00434 - - ko00000,ko00001,ko00002,ko01000,ko01001,ko02022 - - - HATPase_c,HisKA BECNEDJF_02711 411477.PARMER_03345 9.54e-204 563.0 COG0204@1|root,COG0204@2|Bacteria,4NF25@976|Bacteroidetes,2FNJQ@200643|Bacteroidia,22XB4@171551|Porphyromonadaceae 976|Bacteroidetes I Acyltransferase - - - - - - - - - - - - Acyltransferase BECNEDJF_02712 411477.PARMER_03346 2.24e-237 652.0 COG3176@1|root,COG3176@2|Bacteria,4PKEK@976|Bacteroidetes,2FKZ3@200643|Bacteroidia,22W0V@171551|Porphyromonadaceae 976|Bacteroidetes S Hemolysin - - - - - - - - - - - - Acetyltransf_5 BECNEDJF_02713 411477.PARMER_03347 6.27e-142 400.0 COG0727@1|root,COG0727@2|Bacteria,4NEPX@976|Bacteroidetes,2FNXY@200643|Bacteroidia,22XM5@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3109) - - - - - - - - - - - - DUF3109 BECNEDJF_02714 411477.PARMER_03348 3.64e-59 184.0 2CCSR@1|root,32RWC@2|Bacteria,4NSDM@976|Bacteroidetes,2FU2H@200643|Bacteroidia,22YGZ@171551|Porphyromonadaceae 976|Bacteroidetes S tigr02436 - - - - - - - - - - - - 23S_rRNA_IVP BECNEDJF_02715 411477.PARMER_03349 0.0 1028.0 COG0696@1|root,COG0696@2|Bacteria,4NEQT@976|Bacteroidetes,2FMVJ@200643|Bacteroidia,22W4Q@171551|Porphyromonadaceae 976|Bacteroidetes G Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate gpmI - 5.4.2.12 ko:K15633 ko00010,ko00260,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00010,map00260,map00680,map01100,map01110,map01120,map01130,map01200,map01230 M00001,M00002,M00003 R01518 RC00536 ko00000,ko00001,ko00002,ko01000 - - - Metalloenzyme,Phosphodiest,iPGM_N BECNEDJF_02716 411477.PARMER_03350 1.98e-166 465.0 COG1451@1|root,COG1451@2|Bacteria,4NNY6@976|Bacteroidetes,2FPFA@200643|Bacteroidia,22Y3J@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function DUF45 - - - ko:K07043 - - - - ko00000 - - - DUF45 BECNEDJF_02717 411477.PARMER_00441 0.0 912.0 COG2115@1|root,COG2115@2|Bacteria,4NEBQ@976|Bacteroidetes,2FN9P@200643|Bacteroidia,22WI3@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase xylA GO:0003674,GO:0003824,GO:0005975,GO:0005996,GO:0008150,GO:0008152,GO:0009045,GO:0009056,GO:0016052,GO:0016853,GO:0016860,GO:0016861,GO:0019321,GO:0019323,GO:0042732,GO:0042843,GO:0044238,GO:0044281,GO:0044282,GO:0046365,GO:0071704,GO:1901575 5.3.1.5 ko:K01805 ko00040,ko00051,ko01100,map00040,map00051,map01100 - R00878,R01432 RC00376,RC00516 ko00000,ko00001,ko01000 - - - - BECNEDJF_02718 999419.HMPREF1077_03594 0.0 975.0 COG1070@1|root,COG1070@2|Bacteria,4NFBZ@976|Bacteroidetes,2FPIS@200643|Bacteroidia,22WNJ@171551|Porphyromonadaceae 976|Bacteroidetes G FGGY family of carbohydrate kinases, N-terminal domain xylB_2 - 2.7.1.17 ko:K00854 ko00040,ko01100,map00040,map01100 M00014 R01639 RC00002,RC00538 ko00000,ko00001,ko00002,ko01000 - - - FGGY_C,FGGY_N BECNEDJF_02719 411477.PARMER_00443 1.86e-171 478.0 COG1051@1|root,COG1051@2|Bacteria,4NIBP@976|Bacteroidetes,2FNT4@200643|Bacteroidia,22XT1@171551|Porphyromonadaceae 976|Bacteroidetes F NUDIX domain - - - - - - - - - - - - NUDIX BECNEDJF_02720 411477.PARMER_00444 0.0 1136.0 COG0168@1|root,COG0168@2|Bacteria,4NF7R@976|Bacteroidetes,2FPRA@200643|Bacteroidia,22WUJ@171551|Porphyromonadaceae 976|Bacteroidetes P COG0168 Trk-type K transport systems, membrane components ktrB - - ko:K03498 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkH BECNEDJF_02721 411477.PARMER_00445 4.3e-159 446.0 COG0569@1|root,COG0569@2|Bacteria,4NGRQ@976|Bacteroidetes,2FMQT@200643|Bacteroidia,22YIR@171551|Porphyromonadaceae 976|Bacteroidetes P COG0569 K transport systems NAD-binding component ktrA - - ko:K03499 - - - - ko00000,ko02000 2.A.38.1,2.A.38.4 - - TrkA_C,TrkA_N BECNEDJF_02722 411477.PARMER_00446 1.39e-295 808.0 COG1253@1|root,COG1253@2|Bacteria,4NE9R@976|Bacteroidetes,2FN9R@200643|Bacteroidia,22W70@171551|Porphyromonadaceae 976|Bacteroidetes P Transporter associated domain corC_1 - - ko:K03699 - - - - ko00000,ko02042 - - - CBS,CorC_HlyC,DUF21 BECNEDJF_02723 411477.PARMER_00447 1.69e-56 176.0 2A1BY@1|root,30PIV@2|Bacteria,4PHRF@976|Bacteroidetes,2FTNE@200643|Bacteroidia,231F5@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02724 411477.PARMER_00448 2.58e-102 295.0 COG0537@1|root,COG0537@2|Bacteria,4NNS7@976|Bacteroidetes,2FPNF@200643|Bacteroidia,230A6@171551|Porphyromonadaceae 976|Bacteroidetes FG HIT domain - - - - - - - - - - - - HIT BECNEDJF_02725 411477.PARMER_00449 3.55e-230 633.0 COG1082@1|root,COG1082@2|Bacteria,4NJF7@976|Bacteroidetes,2G2TH@200643|Bacteroidia,231JP@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - - - - - - - - - - - AP_endonuc_2 BECNEDJF_02726 411477.PARMER_00450 6.11e-158 443.0 COG1136@1|root,COG1136@2|Bacteria,4NFDW@976|Bacteroidetes,2FMDA@200643|Bacteroidia,22W90@171551|Porphyromonadaceae 976|Bacteroidetes V bacteriocin export ABC transporter, lactococcin 972 group - - - ko:K02003 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran BECNEDJF_02727 411477.PARMER_00451 0.0 1549.0 COG0577@1|root,COG0577@2|Bacteria,4NDUK@976|Bacteroidetes,2FN9Q@200643|Bacteroidia,22WY9@171551|Porphyromonadaceae 976|Bacteroidetes V FtsX-like permease family - - - ko:K02004 - M00258 - - ko00000,ko00002,ko02000 3.A.1 - - FtsX,MacB_PCD BECNEDJF_02728 411477.PARMER_01559 6.89e-299 814.0 COG0520@1|root,COG0520@2|Bacteria,4NDUB@976|Bacteroidetes,2FPF8@200643|Bacteroidia,22WTU@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine sufS - 2.8.1.7,4.4.1.16 ko:K11717 ko00450,ko01100,map00450,map01100 - R03599,R11528 RC00961,RC01789,RC02313 ko00000,ko00001,ko01000 - - - Aminotran_5 BECNEDJF_02729 411477.PARMER_01560 1.41e-199 551.0 COG2273@1|root,COG2273@2|Bacteria,4NGMJ@976|Bacteroidetes,2FQ32@200643|Bacteroidia,22XRY@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 16 bglA_1 - - - - - - - - - - - Glyco_hydro_16 BECNEDJF_02730 411477.PARMER_01561 0.0 1817.0 COG3250@1|root,COG3250@2|Bacteria,4NHRH@976|Bacteroidetes,2FMR5@200643|Bacteroidia,22ZST@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 2, TIM barrel domain lacZ_17 - 3.2.1.23 ko:K01190 ko00052,ko00511,ko00600,ko01100,map00052,map00511,map00600,map01100 - R01105,R01678,R03355,R04783,R06114 RC00049,RC00452 ko00000,ko00001,ko01000 - - - DUF4982,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_02732 411477.PARMER_01562 0.0 1379.0 COG3525@1|root,COG3525@2|Bacteria,4NE08@976|Bacteroidetes,2FNFR@200643|Bacteroidia,22XGQ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - CHB_HEX,CHB_HEX_C,Glyco_hydro_20,Glyco_hydro_20b BECNEDJF_02733 999419.HMPREF1077_00224 0.0 994.0 COG3193@1|root,COG3193@2|Bacteria,4PKSR@976|Bacteroidetes,2FP0M@200643|Bacteroidia,23038@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02734 999419.HMPREF1077_00223 0.0 2020.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22W07@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02735 411477.PARMER_01567 3.65e-224 618.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia,22XRQ@171551|Porphyromonadaceae 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR BECNEDJF_02736 411477.PARMER_02028 4.18e-242 713.0 COG1196@1|root,COG3941@1|root,COG1196@2|Bacteria,COG3941@2|Bacteria,4NF3E@976|Bacteroidetes,2FNYJ@200643|Bacteroidia,22YP9@171551|Porphyromonadaceae 976|Bacteroidetes D Psort location OuterMembrane, score - - - - - - - - - - - - - BECNEDJF_02737 411477.PARMER_02027 1.12e-93 273.0 28ZVV@1|root,2ZMKC@2|Bacteria,4P8GU@976|Bacteroidetes,2FV87@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02738 999419.HMPREF1077_00023 8.98e-296 806.0 COG4833@1|root,COG4833@2|Bacteria,4NF5Z@976|Bacteroidetes,2FNXG@200643|Bacteroidia,22XJC@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 76 - - - - - - - - - - - - Glyco_hydro_76 BECNEDJF_02739 411477.PARMER_03143 0.0 1021.0 COG3538@1|root,COG3538@2|Bacteria,4NGY6@976|Bacteroidetes,2FM8H@200643|Bacteroidia,22VYN@171551|Porphyromonadaceae 976|Bacteroidetes S DUF1237 - - - ko:K09704 - - - - ko00000 - - - Glyco_hydro_125 BECNEDJF_02740 411477.PARMER_03142 9.44e-169 471.0 COG0846@1|root,COG0846@2|Bacteria,4NE9Q@976|Bacteroidetes,2FNXN@200643|Bacteroidia,22VUN@171551|Porphyromonadaceae 976|Bacteroidetes K NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form cobB - - ko:K12410 - - - - ko00000,ko01000 - - - SIR2 BECNEDJF_02741 411477.PARMER_03141 0.0 908.0 COG1757@1|root,COG1757@2|Bacteria,4NFQT@976|Bacteroidetes,2FNIY@200643|Bacteroidia,22WAI@171551|Porphyromonadaceae 976|Bacteroidetes C Na+/H+ antiporter family nhaC - - ko:K03315 - - - - ko00000,ko02000 2.A.35 - - Na_H_antiporter BECNEDJF_02742 411477.PARMER_03140 6.08e-245 677.0 COG1301@1|root,COG1301@2|Bacteria,4NE5X@976|Bacteroidetes,2FP3G@200643|Bacteroidia,22X00@171551|Porphyromonadaceae 976|Bacteroidetes U Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family sstT - - - - - - - - - - - SDF BECNEDJF_02743 411477.PARMER_03139 5.71e-126 358.0 COG0847@1|root,COG0847@2|Bacteria,4NEQX@976|Bacteroidetes,2FQEU@200643|Bacteroidia,22Y8S@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III - - 2.7.7.7 ko:K02342 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DUF5051,RNase_T BECNEDJF_02744 411477.PARMER_03138 0.0 2183.0 COG0793@1|root,COG4946@1|root,COG0793@2|Bacteria,COG4946@2|Bacteria,4NGU2@976|Bacteroidetes,2FPGA@200643|Bacteroidia,22XI5@171551|Porphyromonadaceae 976|Bacteroidetes M Tricorn protease homolog - - - ko:K08676 - - - - ko00000,ko01000,ko01002 - - - PD40,Peptidase_S41,Tricorn_C1,Tricorn_PDZ BECNEDJF_02746 999419.HMPREF1077_00015 0.0 1183.0 COG0436@1|root,COG0436@2|Bacteria,4NEN3@976|Bacteroidetes,2FNFW@200643|Bacteroidia,22ZQW@171551|Porphyromonadaceae 976|Bacteroidetes E Starch-binding associating with outer membrane - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02747 411477.PARMER_03132 2.8e-286 809.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,22XBF@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02748 999419.HMPREF1077_00758 1.89e-187 522.0 COG0190@1|root,COG0190@2|Bacteria,4NEJP@976|Bacteroidetes,2FMNT@200643|Bacteroidia,22X77@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate folD GO:0003674,GO:0003824,GO:0004477,GO:0004488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006730,GO:0008150,GO:0008152,GO:0009987,GO:0016491,GO:0016645,GO:0016646,GO:0016787,GO:0016810,GO:0016814,GO:0019238,GO:0044237,GO:0044281,GO:0044424,GO:0044444,GO:0044464,GO:0055114 1.5.1.5,3.5.4.9 ko:K01491 ko00670,ko00720,ko01100,ko01120,ko01200,map00670,map00720,map01100,map01120,map01200 M00140,M00377 R01220,R01655 RC00202,RC00578 ko00000,ko00001,ko00002,ko01000 - - - THF_DHG_CYH,THF_DHG_CYH_C BECNEDJF_02749 411477.PARMER_00994 1.77e-261 716.0 COG2843@1|root,COG2843@2|Bacteria,4NGD2@976|Bacteroidetes,2FQ0M@200643|Bacteroidia,2320N@171551|Porphyromonadaceae 976|Bacteroidetes M Bacterial capsule synthesis protein - - - ko:K07282 - - - - ko00000 - - - PGA_cap BECNEDJF_02755 411477.PARMER_03862 0.0 1603.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22W3K@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_02756 411477.PARMER_03861 0.0 1576.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMXD@200643|Bacteroidia,22WP0@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_02757 411477.PARMER_03860 0.0 1606.0 COG3537@1|root,COG3537@2|Bacteria,4NKNG@976|Bacteroidetes,2FQE6@200643|Bacteroidia,22XJZ@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_02758 411477.PARMER_03859 1.82e-279 763.0 COG1479@1|root,COG1479@2|Bacteria,4NRVQ@976|Bacteroidetes,2FTAB@200643|Bacteroidia,22YPV@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function DUF262 - - - - - - - - - - - - DUF262 BECNEDJF_02759 411477.PARMER_03858 1.73e-246 676.0 COG4938@1|root,COG4938@2|Bacteria,4NMVA@976|Bacteroidetes,2FUI5@200643|Bacteroidia,230WK@171551|Porphyromonadaceae 976|Bacteroidetes S AAA ATPase domain - - - - - - - - - - - - AAA_15,AAA_21,DUF3696 BECNEDJF_02760 411477.PARMER_03857 6.91e-175 487.0 2E8IY@1|root,332WW@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - - BECNEDJF_02761 411477.PARMER_03856 0.0 1090.0 COG0205@1|root,COG0205@2|Bacteria,4NIKT@976|Bacteroidetes,2FNYX@200643|Bacteroidia,22X32@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP-PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions pfp - 2.7.1.11,2.7.1.90 ko:K00895,ko:K21071 ko00010,ko00030,ko00051,ko00052,ko00680,ko01100,ko01110,ko01120,ko01130,map00010,map00030,map00051,map00052,map00680,map01100,map01110,map01120,map01130 - R00756,R00764,R02073,R03236,R04779 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PFK BECNEDJF_02762 411477.PARMER_00615 3.87e-61 190.0 COG2087@1|root,COG2087@2|Bacteria,4NMKE@976|Bacteroidetes,2FSA1@200643|Bacteroidia,22XKW@171551|Porphyromonadaceae 976|Bacteroidetes H cobinamide kinase cobU - 2.7.1.156,2.7.7.62 ko:K02231 ko00860,ko01100,map00860,map01100 M00122 R05221,R05222,R06558 RC00002,RC00428 ko00000,ko00001,ko00002,ko01000 - - - CobU BECNEDJF_02763 411477.PARMER_00614 6.09e-254 696.0 COG2038@1|root,COG2038@2|Bacteria,4NG1E@976|Bacteroidetes,2FMWI@200643|Bacteroidia,22WI9@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6- dimethylbenzimidazole (DMB) cobT - 2.4.2.21 ko:K00768 ko00860,ko01100,map00860,map01100 M00122 R04148 RC00033,RC00063 ko00000,ko00001,ko00002,ko01000 - - - DBI_PRT BECNEDJF_02764 411477.PARMER_00613 3.81e-173 483.0 COG0368@1|root,COG0368@2|Bacteria,4NHNT@976|Bacteroidetes,2FNXF@200643|Bacteroidia,22XVT@171551|Porphyromonadaceae 976|Bacteroidetes H Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'-phosphate cobS - 2.7.8.26 ko:K02233 ko00860,ko01100,map00860,map01100 M00122 R05223,R11174 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - CobS BECNEDJF_02765 411477.PARMER_00612 1.15e-131 372.0 COG0406@1|root,COG0406@2|Bacteria,4NQD3@976|Bacteroidetes,2FS51@200643|Bacteroidia,22XZ9@171551|Porphyromonadaceae 976|Bacteroidetes G phosphoglycerate mutase cobC - 3.1.3.73 ko:K02226 ko00860,ko01100,map00860,map01100 M00122 R04594,R11173 RC00017 ko00000,ko00001,ko00002,ko01000 - - - His_Phos_1 BECNEDJF_02766 411477.PARMER_00610 3.74e-204 564.0 295Z7@1|root,2ZTA0@2|Bacteria,4NP7A@976|Bacteroidetes,2FPCX@200643|Bacteroidia,22YVA@171551|Porphyromonadaceae 976|Bacteroidetes S Putative beta-lactamase-inhibitor-like, PepSY-like - - - - - - - - - - - - PepSY_like BECNEDJF_02767 411477.PARMER_00609 3.88e-97 283.0 COG3212@1|root,COG3212@2|Bacteria,4NQW5@976|Bacteroidetes,2FSR8@200643|Bacteroidia,22Y96@171551|Porphyromonadaceae 976|Bacteroidetes S Putative beta-lactamase-inhibitor-like, PepSY-like - - - - - - - - - - - - PepSY_like BECNEDJF_02768 411477.PARMER_00608 0.0 1122.0 COG5640@1|root,COG5640@2|Bacteria,4PKEW@976|Bacteroidetes,2FRKU@200643|Bacteroidia,231HM@171551|Porphyromonadaceae 976|Bacteroidetes O Trypsin-like peptidase domain - - 3.4.21.50 ko:K01337 - - - - ko00000,ko01000,ko01002 - - - Trypsin_2 BECNEDJF_02769 411477.PARMER_00607 0.0 978.0 COG3063@1|root,COG3063@2|Bacteria,4PKG6@976|Bacteroidetes,2G3G2@200643|Bacteroidia,2322F@171551|Porphyromonadaceae 976|Bacteroidetes NU Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_16,TPR_2,TPR_8 BECNEDJF_02770 411477.PARMER_00605 0.0 1608.0 COG3537@1|root,COG3537@2|Bacteria,4NDYB@976|Bacteroidetes,2FMQ9@200643|Bacteroidia,22W3K@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 92 - - - - - - - - - - - - Glyco_hydro_92 BECNEDJF_02771 411477.PARMER_00604 0.0 1130.0 2DZRA@1|root,32VGT@2|Bacteria,4NW08@976|Bacteroidetes,2FWST@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02772 411477.PARMER_00601 0.0 932.0 COG5434@1|root,COG5434@2|Bacteria,4NFSC@976|Bacteroidetes,2FNQN@200643|Bacteroidia,22Y8F@171551|Porphyromonadaceae 976|Bacteroidetes G Pectate lyase superfamily protein - - - - - - - - - - - - Glyco_hydro_28,Pectate_lyase_3 BECNEDJF_02775 411477.PARMER_02737 1.91e-304 830.0 COG0162@1|root,COG0162@2|Bacteria,4NF19@976|Bacteroidetes,2FN0B@200643|Bacteroidia,22VXJ@171551|Porphyromonadaceae 976|Bacteroidetes J Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr) tyrS - 6.1.1.1 ko:K01866 ko00970,map00970 M00359,M00360 R02918 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029 - - - S4,tRNA-synt_1b BECNEDJF_02776 411477.PARMER_02736 2.16e-150 422.0 COG0084@1|root,COG0084@2|Bacteria,4NSGW@976|Bacteroidetes,2FQ90@200643|Bacteroidia,22Y9I@171551|Porphyromonadaceae 976|Bacteroidetes L hydrolase, TatD family - - - ko:K03424 - - - - ko00000,ko01000 - - - TatD_DNase BECNEDJF_02777 411477.PARMER_02735 6.23e-51 160.0 COG0759@1|root,COG0759@2|Bacteria,4NV1N@976|Bacteroidetes,2FTU6@200643|Bacteroidia,22YS5@171551|Porphyromonadaceae 976|Bacteroidetes S Could be involved in insertion of integral membrane proteins into the membrane yidD - - ko:K08998 - - - - ko00000 - - - Haemolytic BECNEDJF_02778 411477.PARMER_02734 1.24e-82 244.0 COG0594@1|root,COG0594@2|Bacteria,4NUMM@976|Bacteroidetes,2FUKM@200643|Bacteroidia,22YNG@171551|Porphyromonadaceae 976|Bacteroidetes J RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme rnpA - 3.1.26.5 ko:K03536 - - - - ko00000,ko01000,ko03016 - - - Ribonuclease_P BECNEDJF_02779 411477.PARMER_02733 1.14e-182 508.0 COG1587@1|root,COG1587@2|Bacteria,4NEQ3@976|Bacteroidetes,2FMX9@200643|Bacteroidia,22W2D@171551|Porphyromonadaceae 976|Bacteroidetes H Uroporphyrinogen-III synthase hemD - 4.2.1.75 ko:K01719 ko00860,ko01100,ko01110,ko01120,map00860,map01100,map01110,map01120 M00121 R03165 RC01861 ko00000,ko00001,ko00002,ko01000 - - - HEM4 BECNEDJF_02780 411477.PARMER_02732 2.69e-169 473.0 2CEK0@1|root,321UV@2|Bacteria,4NUC9@976|Bacteroidetes,2FQ1Y@200643|Bacteroidia,22YU9@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4271) - - - - - - - - - - - - DUF4271 BECNEDJF_02781 999419.HMPREF1077_01561 0.0 993.0 COG0673@1|root,COG0673@2|Bacteria,4NH13@976|Bacteroidetes,2FPIH@200643|Bacteroidia,22WA6@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA BECNEDJF_02782 411477.PARMER_02729 0.0 1860.0 COG0612@1|root,COG0612@2|Bacteria,4NFY0@976|Bacteroidetes,2FMCE@200643|Bacteroidia,22WW4@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the peptidase M16 family - - - ko:K07263 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M16,Peptidase_M16_C BECNEDJF_02783 411477.PARMER_02728 1.66e-206 572.0 COG1284@1|root,COG1284@2|Bacteria,4NG9F@976|Bacteroidetes,2FP2N@200643|Bacteroidia,22WWJ@171551|Porphyromonadaceae 976|Bacteroidetes S membrane - - - - - - - - - - - - DUF2179,YitT_membrane BECNEDJF_02784 411477.PARMER_02727 1.2e-294 801.0 COG3507@1|root,COG3507@2|Bacteria,4PKZY@976|Bacteroidetes,2G09G@200643|Bacteroidia,22WA2@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolases family 43 - - - - - - - - - - - - Glyco_hydro_43 BECNEDJF_02785 411477.PARMER_02726 7.99e-147 416.0 COG3622@1|root,COG3622@2|Bacteria,4NG0V@976|Bacteroidetes,2FSYZ@200643|Bacteroidia,22Z34@171551|Porphyromonadaceae 976|Bacteroidetes G Xylose isomerase-like TIM barrel - - 5.3.1.22 ko:K01816 ko00630,ko01100,map00630,map01100 - R01394 RC00511 ko00000,ko00001,ko01000 - - - AP_endonuc_2 BECNEDJF_02787 411477.PARMER_01602 2.71e-122 367.0 2ENTM@1|root,33GET@2|Bacteria,4P3M4@976|Bacteroidetes 976|Bacteroidetes S Major fimbrial subunit protein (FimA) - GO:0005575,GO:0005623,GO:0009289,GO:0042995,GO:0044464 - - - - - - - - - - Fimbrillin_C,P_gingi_FimA BECNEDJF_02788 449673.BACSTE_02908 9.48e-14 78.2 2FA05@1|root,3429A@2|Bacteria,4P4HT@976|Bacteroidetes,2FM63@200643|Bacteroidia,4AS0S@815|Bacteroidaceae 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - - - - - - - - - - - - Mfa2 BECNEDJF_02789 880526.KE386488_gene1471 2.99e-07 62.8 28NA0@1|root,2ZBDV@2|Bacteria,4NJGM@976|Bacteroidetes,2G0Q5@200643|Bacteroidia,22UVZ@171550|Rikenellaceae 976|Bacteroidetes S Domain of unknown function (DUF4906) - - - - - - - - - - - - DUF4906,Fib_succ_major BECNEDJF_02790 411477.PARMER_01599 1.64e-262 719.0 2DV6Y@1|root,33UEJ@2|Bacteria,4P844@976|Bacteroidetes 976|Bacteroidetes S Major fimbrial subunit protein (FimA) - - - - - - - - - - - - P_gingi_FimA BECNEDJF_02794 411477.PARMER_01595 0.0 1411.0 COG5545@1|root,COG5545@2|Bacteria,4NG2W@976|Bacteroidetes,2FNU1@200643|Bacteroidia,2300D@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG26639 non supervised orthologous group - - - - - - - - - - - - DUF3874,VirE,VirE_N BECNEDJF_02795 411477.PARMER_01594 2.11e-89 262.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - Bac_DNA_binding BECNEDJF_02796 411477.PARMER_03885 4.98e-94 292.0 COG0465@1|root,COG0465@2|Bacteria,4NF0E@976|Bacteroidetes,2FNEA@200643|Bacteroidia,22X35@171551|Porphyromonadaceae 976|Bacteroidetes O Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins ftsH - - ko:K03798 - M00742 - - ko00000,ko00002,ko01000,ko01002,ko03110 - - - AAA,FtsH_ext,Peptidase_M41 BECNEDJF_02797 411477.PARMER_03886 2.61e-198 549.0 COG4589@1|root,COG4589@2|Bacteria,4NIPM@976|Bacteroidetes,2FMKC@200643|Bacteroidia,22XR3@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the CDS family cdsA - 2.7.7.41 ko:K00981 ko00564,ko01100,ko01110,ko04070,map00564,map01100,map01110,map04070 M00093 R01799 RC00002 ko00000,ko00001,ko00002,ko01000 - - - CTP_transf_1 BECNEDJF_02798 999419.HMPREF1077_01136 9.45e-180 499.0 2C52N@1|root,2Z7U1@2|Bacteria,4NEZW@976|Bacteroidetes,2FNRZ@200643|Bacteroidia,22XME@171551|Porphyromonadaceae 976|Bacteroidetes S PorT protein porT - - - - - - - - - - - OMP_b-brl_2 BECNEDJF_02799 411477.PARMER_00639 0.0 941.0 COG2271@1|root,COG2271@2|Bacteria,4NE7R@976|Bacteroidetes,2FNZJ@200643|Bacteroidia,22WCH@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily exuT - - ko:K08191 - - - - ko00000,ko02000 2.A.1.14.2 - - MFS_1 BECNEDJF_02800 411477.PARMER_02210 2.34e-241 662.0 COG0673@1|root,COG0673@2|Bacteria,4NE07@976|Bacteroidetes,2FNUN@200643|Bacteroidia,22X96@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase NAD-binding domain protein - - - - - - - - - - - - GFO_IDH_MocA BECNEDJF_02801 411477.PARMER_02209 0.0 1670.0 COG3525@1|root,COG3525@2|Bacteria,4NHNU@976|Bacteroidetes,2FMM8@200643|Bacteroidia,22X64@171551|Porphyromonadaceae 976|Bacteroidetes G beta-N-acetylglucosaminidase - GO:0003674,GO:0003824,GO:0004553,GO:0004563,GO:0005488,GO:0005515,GO:0005975,GO:0006464,GO:0006517,GO:0006807,GO:0008150,GO:0008152,GO:0009100,GO:0009987,GO:0015929,GO:0016231,GO:0016787,GO:0016798,GO:0019538,GO:0036211,GO:0042802,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0071704,GO:1901135,GO:1901564 3.2.1.35 ko:K01197 ko00531,ko01100,map00531,map01100 M00076,M00077 R07824,R07825,R10905 - ko00000,ko00001,ko00002,ko00536,ko00537,ko01000,ko02042 - - - F5_F8_type_C,Glyco_hydro_20b,NAGidase BECNEDJF_02802 411477.PARMER_02208 0.0 1095.0 COG1305@1|root,COG1305@2|Bacteria,4NIJF@976|Bacteroidetes,2FQJU@200643|Bacteroidia,22XJ6@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function with PDB structure (DUF3858) - - - - - - - - - - - - DUF3857,DUF3858,Transglut_core BECNEDJF_02803 411477.PARMER_02207 0.0 1328.0 COG1305@1|root,COG1305@2|Bacteria,4NI6P@976|Bacteroidetes,2FPYJ@200643|Bacteroidia,22XFT@171551|Porphyromonadaceae 976|Bacteroidetes E Domain of Unknown Function with PDB structure (DUF3857) - - - - - - - - - - - - DUF3857,DUF3858,Transglut_core BECNEDJF_02804 411477.PARMER_02206 4.91e-264 723.0 COG0318@1|root,COG0318@2|Bacteria,4NEXK@976|Bacteroidetes,2FM16@200643|Bacteroidia,22X5D@171551|Porphyromonadaceae 976|Bacteroidetes IQ O-succinylbenzoic acid--CoA ligase menE - 6.2.1.26 ko:K01911 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R04030 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000 - - - AMP-binding,AMP-binding_C BECNEDJF_02805 411477.PARMER_02205 1.1e-258 708.0 COG4948@1|root,COG4948@2|Bacteria,4NEBX@976|Bacteroidetes,2FMXR@200643|Bacteroidia,22X1A@171551|Porphyromonadaceae 976|Bacteroidetes M Mandelate racemase muconate lactonizing enzyme menC - - - - - - - - - - - MR_MLE_C BECNEDJF_02806 411477.PARMER_02204 1.03e-198 550.0 COG0447@1|root,COG0447@2|Bacteria,4NDXT@976|Bacteroidetes,2FMME@200643|Bacteroidia,22VYD@171551|Porphyromonadaceae 976|Bacteroidetes H Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA) menB - 4.1.3.36 ko:K01661 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R07263 RC01923 ko00000,ko00001,ko00002,ko01000 - - - ECH_1 BECNEDJF_02807 411477.PARMER_02203 0.0 1192.0 COG1165@1|root,COG1165@2|Bacteria,4NETZ@976|Bacteroidetes,2FMSK@200643|Bacteroidia,22W02@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) menD - 2.2.1.9 ko:K02551 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R08165 RC02186 ko00000,ko00001,ko00002,ko01000 - - - TPP_enzyme_C,TPP_enzyme_M_2,TPP_enzyme_N BECNEDJF_02808 411477.PARMER_02202 8.11e-268 768.0 COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,2FQU9@200643|Bacteroidia,22W8U@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF5110) - - - - - - - - - - - - Cohesin,DUF4968,DUF5110,F5_F8_type_C,Gal_mutarotas_2,Glyco_hydro_31,fn3 BECNEDJF_02811 411477.PARMER_00178 6.63e-95 276.0 2BXIZ@1|root,32R1E@2|Bacteria,4NR51@976|Bacteroidetes,2FS62@200643|Bacteroidia,22YG8@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_02812 411477.PARMER_00179 3.16e-298 813.0 COG0128@1|root,COG0128@2|Bacteria,4NE8T@976|Bacteroidetes,2FNY8@200643|Bacteroidia,22WBG@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate aroA - 2.5.1.19 ko:K00800 ko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230 M00022 R03460 RC00350 ko00000,ko00001,ko00002,ko01000 - - - EPSP_synthase BECNEDJF_02813 411477.PARMER_01764 9.49e-261 717.0 COG0457@1|root,COG0457@2|Bacteria,4NIY9@976|Bacteroidetes,2FP2Z@200643|Bacteroidia,22WMV@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat protein - - - - - - - - - - - - TPR_11,TPR_16,TPR_8 BECNEDJF_02815 411477.PARMER_01766 3.02e-136 387.0 COG1961@1|root,COG1961@2|Bacteria,4NJM8@976|Bacteroidetes,2FMQS@200643|Bacteroidia,22XYK@171551|Porphyromonadaceae 976|Bacteroidetes L Resolvase, N terminal domain - - - - - - - - - - - - HTH_7,Resolvase BECNEDJF_02817 999419.HMPREF1077_02886 2.65e-36 126.0 COG0693@1|root,COG0693@2|Bacteria,4NMKV@976|Bacteroidetes,2FM6K@200643|Bacteroidia,22XNE@171551|Porphyromonadaceae 976|Bacteroidetes S DJ-1/PfpI family - - 3.5.1.124 ko:K05520 - - - - ko00000,ko01000,ko01002 - - - DJ-1_PfpI BECNEDJF_02818 411477.PARMER_01769 0.0 947.0 COG2265@1|root,COG2265@2|Bacteria,4NFP1@976|Bacteroidetes,2FNRC@200643|Bacteroidia,22X3X@171551|Porphyromonadaceae 976|Bacteroidetes J Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family rumA - 2.1.1.190 ko:K03215 - - - - ko00000,ko01000,ko03009 - - - TRAM,tRNA_U5-meth_tr BECNEDJF_02819 411477.PARMER_01770 0.0 944.0 COG4623@1|root,COG4623@2|Bacteria,4NHFW@976|Bacteroidetes,2FN2R@200643|Bacteroidia,22W80@171551|Porphyromonadaceae 976|Bacteroidetes M Transglycosylase SLT domain mltF - - ko:K18691 - - - - ko00000,ko01000,ko01011 - - - SBP_bac_3,SLT BECNEDJF_02820 411477.PARMER_01771 1.63e-121 347.0 COG4585@1|root,COG4585@2|Bacteria,4PMUS@976|Bacteroidetes,2G0H3@200643|Bacteroidia,22Y87@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase - - - - - - - - - - - - HATPase_c BECNEDJF_02821 411477.PARMER_01772 1.14e-172 482.0 COG0613@1|root,COG0613@2|Bacteria,4PMUT@976|Bacteroidetes,2G0H4@200643|Bacteroidia,22Y1H@171551|Porphyromonadaceae 976|Bacteroidetes S DNA polymerase alpha chain like domain - - - - - - - - - - - - PHP BECNEDJF_02822 411477.PARMER_01773 4.42e-73 219.0 COG4109@1|root,COG4109@2|Bacteria,4NTA0@976|Bacteroidetes,2FTZ6@200643|Bacteroidia,22YI5@171551|Porphyromonadaceae 976|Bacteroidetes K DRTGG domain - - - - - - - - - - - - DRTGG BECNEDJF_02823 411477.PARMER_01774 0.0 892.0 COG2000@1|root,COG2221@1|root,COG4624@1|root,COG2000@2|Bacteria,COG2221@2|Bacteria,COG4624@2|Bacteria,4NJAS@976|Bacteroidetes,2FMHZ@200643|Bacteroidia,22WWW@171551|Porphyromonadaceae 976|Bacteroidetes C Iron only hydrogenase large subunit, C-terminal domain - - - - - - - - - - - - FeS,Fe_hyd_lg_C,Fer4,Fer4_6 BECNEDJF_02824 411477.PARMER_01775 2.8e-92 270.0 COG2172@1|root,COG2172@2|Bacteria,4NRAS@976|Bacteroidetes,2FT57@200643|Bacteroidia,22YBD@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPase domain - - - - - - - - - - - - HATPase_c,HATPase_c_2 BECNEDJF_02825 411477.PARMER_01777 5.74e-79 234.0 COG4109@1|root,COG4109@2|Bacteria,4NTDQ@976|Bacteroidetes,2FTXG@200643|Bacteroidia,22YTZ@171551|Porphyromonadaceae 976|Bacteroidetes K DRTGG domain - - - - - - - - - - - - DRTGG BECNEDJF_02826 411477.PARMER_01778 3.85e-197 546.0 COG5146@1|root,COG5146@2|Bacteria,4P0U7@976|Bacteroidetes,2FMS4@200643|Bacteroidia 976|Bacteroidetes H Pantothenate kinase - - 2.7.1.33 ko:K09680 ko00770,ko01100,map00770,map01100 M00120 R02971,R03018,R04391 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Fumble BECNEDJF_02827 411477.PARMER_01779 1.96e-102 296.0 2DY1V@1|root,347PF@2|Bacteria,4P5QK@976|Bacteroidetes,2FQ8B@200643|Bacteroidia 976|Bacteroidetes S COG NOG19145 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_02828 411477.PARMER_01780 0.0 915.0 COG0006@1|root,COG0006@2|Bacteria,4NG40@976|Bacteroidetes,2FMSQ@200643|Bacteroidia,22WVB@171551|Porphyromonadaceae 976|Bacteroidetes E Aminopeptidase P, N-terminal domain pepP - 3.4.11.9 ko:K01262 - - - - ko00000,ko01000,ko01002 - - - AMP_N,Peptidase_M24 BECNEDJF_02830 1122931.AUAE01000022_gene1461 4.37e-210 587.0 COG1075@1|root,COG1075@2|Bacteria,4NFSV@976|Bacteroidetes,2FNWB@200643|Bacteroidia,22XH0@171551|Porphyromonadaceae 976|Bacteroidetes S Alpha/beta hydrolase family - - - - - - - - - - - - Abhydrolase_6 BECNEDJF_02831 411477.PARMER_04375 1.43e-116 333.0 COG1917@1|root,COG1917@2|Bacteria,4NRJA@976|Bacteroidetes,2G2QB@200643|Bacteroidia,231S9@171551|Porphyromonadaceae 976|Bacteroidetes S Cupin domain - - - - - - - - - - - - AraC_binding,Cupin_2 BECNEDJF_02832 1121101.HMPREF1532_02866 0.0 1028.0 COG0599@1|root,COG1073@1|root,COG0599@2|Bacteria,COG1073@2|Bacteria,4NFJZ@976|Bacteroidetes,2FMNP@200643|Bacteroidia,4AM6J@815|Bacteroidaceae 976|Bacteroidetes S of the alpha beta superfamily - - - ko:K06889 - - - - ko00000 - - - CMD,DLH BECNEDJF_02833 411477.PARMER_04378 7.19e-122 347.0 COG2207@1|root,COG2207@2|Bacteria,4P1X5@976|Bacteroidetes,2FS7A@200643|Bacteroidia,230B1@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - - BECNEDJF_02834 411477.PARMER_04379 1.82e-225 620.0 COG2207@1|root,COG2207@2|Bacteria,4NDYY@976|Bacteroidetes,2FNFA@200643|Bacteroidia,22ZR4@171551|Porphyromonadaceae 976|Bacteroidetes K helix_turn_helix, arabinose operon control protein - - - - - - - - - - - - HTH_18 BECNEDJF_02835 411477.PARMER_04380 0.0 1170.0 COG0422@1|root,COG0422@2|Bacteria,4NFTF@976|Bacteroidetes,2FMBC@200643|Bacteroidia,22W6U@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction thiC GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 4.1.99.17 ko:K03147 ko00730,ko01100,map00730,map01100 M00127 R03472 RC03251,RC03252 ko00000,ko00001,ko00002,ko01000 - - - ThiC-associated,ThiC_Rad_SAM BECNEDJF_02836 411477.PARMER_04381 5.27e-182 505.0 COG0352@1|root,COG0352@2|Bacteria,4NNFB@976|Bacteroidetes,2FMPB@200643|Bacteroidia,22XMN@171551|Porphyromonadaceae 976|Bacteroidetes H Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) thiE GO:0003674,GO:0003824,GO:0004789,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006725,GO:0006766,GO:0006767,GO:0006772,GO:0006790,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009110,GO:0009228,GO:0009987,GO:0016740,GO:0016765,GO:0017144,GO:0018130,GO:0019438,GO:0034641,GO:0042364,GO:0042723,GO:0042724,GO:0044237,GO:0044249,GO:0044271,GO:0044272,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 - - - Phos_pyr_kin,TMP-TENI BECNEDJF_02837 411477.PARMER_04382 6.01e-147 413.0 COG0352@1|root,COG0352@2|Bacteria,4NRDR@976|Bacteroidetes,2FNNJ@200643|Bacteroidia,22Y4V@171551|Porphyromonadaceae 976|Bacteroidetes H Thiamine monophosphate synthase thiE - 2.5.1.3 ko:K00788 ko00730,ko01100,map00730,map01100 M00127 R03223,R10712 RC00224,RC03255,RC03397 ko00000,ko00001,ko00002,ko01000 - - - TMP-TENI BECNEDJF_02838 411477.PARMER_04383 9.79e-195 540.0 COG0351@1|root,COG0351@2|Bacteria,4NE0F@976|Bacteroidetes,2FNNE@200643|Bacteroidia,22XEP@171551|Porphyromonadaceae 976|Bacteroidetes H Phosphomethylpyrimidine kinase thiD - 2.7.1.49,2.7.4.7 ko:K00941 ko00730,ko01100,map00730,map01100 M00127 R03471,R04509 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - Phos_pyr_kin BECNEDJF_02839 411477.PARMER_04385 0.0 1703.0 COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,2FMTK@200643|Bacteroidia,22WRF@171551|Porphyromonadaceae 976|Bacteroidetes M CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 BECNEDJF_02840 411477.PARMER_04386 6.31e-298 812.0 COG4775@1|root,COG4775@2|Bacteria,4NICB@976|Bacteroidetes,2FP3X@200643|Bacteroidia,22YAP@171551|Porphyromonadaceae 976|Bacteroidetes M Surface antigen - - - - - - - - - - - - Bac_surface_Ag BECNEDJF_02845 411477.PARMER_03260 5.84e-108 311.0 2DW70@1|root,33YUD@2|Bacteria,4P4P0@976|Bacteroidetes,2FSIR@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_02847 411477.PARMER_03894 1.94e-95 278.0 2DEYG@1|root,2ZPSM@2|Bacteria,4NNJW@976|Bacteroidetes,2FTAK@200643|Bacteroidia,22Y3E@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG14473 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_02848 411477.PARMER_03893 8.75e-145 408.0 COG0237@1|root,COG0237@2|Bacteria,4NQKS@976|Bacteroidetes,2FSP8@200643|Bacteroidia,22Y5U@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A coaE GO:0003674,GO:0003824,GO:0004140,GO:0006139,GO:0006163,GO:0006164,GO:0006725,GO:0006732,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009117,GO:0009150,GO:0009152,GO:0009165,GO:0009259,GO:0009260,GO:0009987,GO:0015936,GO:0015937,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0018130,GO:0019438,GO:0019637,GO:0019693,GO:0033865,GO:0033866,GO:0033875,GO:0034030,GO:0034032,GO:0034033,GO:0034641,GO:0034654,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0046390,GO:0046483,GO:0051186,GO:0051188,GO:0055086,GO:0071704,GO:0072521,GO:0072522,GO:0090407,GO:1901135,GO:1901137,GO:1901293,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 2.7.1.24 ko:K00859 ko00770,ko01100,map00770,map01100 M00120 R00130 RC00002,RC00078 ko00000,ko00001,ko00002,ko01000 - - - CoaE BECNEDJF_02851 411477.PARMER_03762 3.79e-87 259.0 COG0203@1|root,COG0203@2|Bacteria,4NNW0@976|Bacteroidetes,2FNPH@200643|Bacteroidia,22XWT@171551|Porphyromonadaceae 976|Bacteroidetes J 50S ribosomal protein L17 rplQ GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0015934,GO:0022625,GO:0022626,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0044391,GO:0044422,GO:0044424,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:1990904 - ko:K02879 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_L17 BECNEDJF_02852 411477.PARMER_03761 2.94e-225 621.0 COG0202@1|root,COG0202@2|Bacteria,4NE8W@976|Bacteroidetes,2FM4P@200643|Bacteroidia,22XAK@171551|Porphyromonadaceae 976|Bacteroidetes K DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates rpoA GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006351,GO:0006354,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019438,GO:0032774,GO:0034062,GO:0034641,GO:0034645,GO:0034654,GO:0043170,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0097659,GO:0097747,GO:0140098,GO:1901360,GO:1901362,GO:1901576 2.7.7.6 ko:K03040 ko00230,ko00240,ko01100,ko03020,map00230,map00240,map01100,map03020 M00183 R00435,R00441,R00442,R00443 RC02795 br01611,ko00000,ko00001,ko00002,ko01000,ko03021,ko03400 - - - RNA_pol_A_CTD,RNA_pol_A_bac,RNA_pol_L BECNEDJF_02853 411477.PARMER_00883 0.0 1202.0 2DB6Z@1|root,2Z7IY@2|Bacteria,4NIQG@976|Bacteroidetes,2FQ70@200643|Bacteroidia,22WEC@171551|Porphyromonadaceae 976|Bacteroidetes S Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02854 411477.PARMER_00882 0.0 2071.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22WRD@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_02855 411477.PARMER_00877 8.89e-176 489.0 COG1741@1|root,COG1741@2|Bacteria,4NGJ5@976|Bacteroidetes,2FPC1@200643|Bacteroidia,22XR8@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the pirin family - - - ko:K06911 - - - - ko00000 - - - Pirin BECNEDJF_02856 411477.PARMER_00876 0.0 991.0 COG0516@1|root,COG0517@1|root,COG0516@2|Bacteria,COG0517@2|Bacteria,4NDXQ@976|Bacteroidetes,2FMKX@200643|Bacteroidia,22WM4@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the synthesis of xanthosine monophosphate by the NAD dependent oxidation of inosine monophosphate - - 1.1.1.205 ko:K00088 ko00230,ko00983,ko01100,ko01110,map00230,map00983,map01100,map01110 M00050 R01130,R08240 RC00143,RC02207 ko00000,ko00001,ko00002,ko01000,ko04147 - - - CBS,IMPDH BECNEDJF_02857 411477.PARMER_00875 5.89e-230 632.0 COG1524@1|root,COG1524@2|Bacteria,4NF0I@976|Bacteroidetes,2FNC7@200643|Bacteroidia,231G6@171551|Porphyromonadaceae 976|Bacteroidetes S Metalloenzyme superfamily - - - - - - - - - - - - Phosphodiest BECNEDJF_02858 411477.PARMER_00874 0.0 1736.0 COG4354@1|root,COG4354@2|Bacteria,4NFQW@976|Bacteroidetes,2FQ1M@200643|Bacteroidia,22X7Y@171551|Porphyromonadaceae 976|Bacteroidetes G beta-glucosidase 2, glycosyl-hydrolase family 116 N-term - - 3.2.1.45 ko:K17108 ko00511,ko00600,ko01100,map00511,map00600,map01100 - R01498 RC00059,RC00451 ko00000,ko00001,ko01000 - GH116 - DUF608,Glyco_hydr_116N BECNEDJF_02859 411477.PARMER_00872 9.71e-159 448.0 COG3507@1|root,COG3507@2|Bacteria,4NGKH@976|Bacteroidetes,2FP3Q@200643|Bacteroidia,2307H@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glycosyl hydrolase 43 family abnA - - - - - - - - - - - Glyco_hydro_43 BECNEDJF_02860 411477.PARMER_03962 0.0 2252.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22VZK@171551|Porphyromonadaceae 976|Bacteroidetes P CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02861 411477.PARMER_03963 0.0 1337.0 COG1435@1|root,COG1435@2|Bacteria,4NHGD@976|Bacteroidetes,2FPQR@200643|Bacteroidia,22XE9@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02862 411477.PARMER_03964 2.64e-210 580.0 COG2264@1|root,COG2264@2|Bacteria,4NFRW@976|Bacteroidetes,2FP0Q@200643|Bacteroidia,22VXF@171551|Porphyromonadaceae 976|Bacteroidetes J Ribosomal protein L11 methyltransferase prmA - - ko:K02687 - - - - ko00000,ko01000,ko03009 - - - PrmA BECNEDJF_02863 999419.HMPREF1077_01055 4.18e-33 115.0 2EGGF@1|root,33A8G@2|Bacteria,4NXJX@976|Bacteroidetes,2FVM3@200643|Bacteroidia,22Z2H@171551|Porphyromonadaceae 976|Bacteroidetes S YtxH-like protein - - - - - - - - - - - - YtxH BECNEDJF_02864 999419.HMPREF1077_01054 2.41e-77 232.0 2E0ZK@1|root,32WFU@2|Bacteria,4NTTI@976|Bacteroidetes,2FUB3@200643|Bacteroidia,22YHR@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - Phage_holin_3_6 BECNEDJF_02865 411477.PARMER_03967 5.73e-82 243.0 2EG77@1|root,339Z4@2|Bacteria,4NYB3@976|Bacteroidetes,2FVKY@200643|Bacteroidia,22YYU@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02866 411477.PARMER_03969 2.65e-223 617.0 COG0057@1|root,COG0057@2|Bacteria,4NEMF@976|Bacteroidetes,2FMT7@200643|Bacteroidia,22WYI@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the glyceraldehyde-3-phosphate dehydrogenase family gap - 1.2.1.12 ko:K00134 ko00010,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko04066,ko05010,map00010,map00710,map01100,map01110,map01120,map01130,map01200,map01230,map04066,map05010 M00001,M00002,M00003,M00165,M00166,M00308,M00552 R01061 RC00149 ko00000,ko00001,ko00002,ko01000,ko04131,ko04147 - - - Gp_dh_C,Gp_dh_N BECNEDJF_02867 997884.HMPREF1068_03115 3.09e-210 580.0 COG2207@1|root,COG2207@2|Bacteria,4NIZN@976|Bacteroidetes,2FNEW@200643|Bacteroidia,4AP62@815|Bacteroidaceae 976|Bacteroidetes K methylphosphotriester-DNA alkyltransferase and transcriptional regulator (AraC XylS family) K00567 - - - - - - - - - - - - Chrome_Resist,HTH_18 BECNEDJF_02868 1203611.KB894551_gene900 6.21e-206 569.0 28KSX@1|root,2ZAA7@2|Bacteria,4NGE9@976|Bacteroidetes,2FN42@200643|Bacteroidia,22VSA@171550|Rikenellaceae 976|Bacteroidetes S RteC protein - - - - - - - - - - - - RteC BECNEDJF_02869 1203611.KB894551_gene899 5.83e-67 203.0 2DVEX@1|root,33VJX@2|Bacteria,4P3CY@976|Bacteroidetes,2FSG3@200643|Bacteroidia 976|Bacteroidetes S Helix-turn-helix domain - - - - - - - - - - - - HTH_17 BECNEDJF_02870 1203611.KB894551_gene898 2.4e-75 224.0 2D42G@1|root,333D7@2|Bacteria,4NSXK@976|Bacteroidetes,2FSMR@200643|Bacteroidia 976|Bacteroidetes S Helix-turn-helix domain - - - - - - - - - - - - HTH_17 BECNEDJF_02871 1203611.KB894551_gene897 5.8e-248 680.0 COG4804@1|root,COG4804@2|Bacteria,4NGY8@976|Bacteroidetes,2FNJG@200643|Bacteroidia,22VC7@171550|Rikenellaceae 976|Bacteroidetes S Protein of unknown function (DUF1016) - - - - - - - - - - - - DUF1016 BECNEDJF_02872 411477.PARMER_03545 6.24e-36 126.0 COG3663@1|root,COG3663@2|Bacteria,4NP4A@976|Bacteroidetes,2FMNZ@200643|Bacteroidia,22XQQ@171551|Porphyromonadaceae 976|Bacteroidetes L DNA glycosylase mug - - - - - - - - - - - - BECNEDJF_02873 411477.PARMER_03544 0.0 998.0 COG0174@1|root,COG0174@2|Bacteria,4NHET@976|Bacteroidetes,2FNAX@200643|Bacteroidia,22W4G@171551|Porphyromonadaceae 976|Bacteroidetes E Psort location Cytoplasmic, score glnA - 6.3.1.2 ko:K01915 ko00220,ko00250,ko00630,ko00910,ko01100,ko01120,ko01230,ko02020,ko04217,ko04724,ko04727,map00220,map00250,map00630,map00910,map01100,map01120,map01230,map02020,map04217,map04724,map04727 - R00253 RC00010,RC02798 ko00000,ko00001,ko01000,ko04147 - - - Gln-synt_C,Gln-synt_N BECNEDJF_02875 411477.PARMER_03542 4.54e-19 79.7 COG1476@1|root,COG1476@2|Bacteria,4NW4R@976|Bacteroidetes,2FVHK@200643|Bacteroidia 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - HTH_26,HTH_3 BECNEDJF_02876 411477.PARMER_01741 0.0 1161.0 COG3669@1|root,COG3669@2|Bacteria,4NGKB@976|Bacteroidetes,2FM4I@200643|Bacteroidia,22XEY@171551|Porphyromonadaceae 976|Bacteroidetes G Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain - - 3.2.1.50 ko:K01205 ko00531,ko01100,ko04142,map00531,map01100,map04142 M00078 R07816 - ko00000,ko00001,ko00002,ko01000,ko04147 - - - NAGLU,NAGLU_C,NAGLU_N BECNEDJF_02877 411477.PARMER_01740 0.0 1885.0 COG1434@1|root,COG1470@1|root,COG1434@2|Bacteria,COG1470@2|Bacteria,4NE96@976|Bacteroidetes,2FR8X@200643|Bacteroidia,22ZBD@171551|Porphyromonadaceae 976|Bacteroidetes S NPCBM/NEW2 domain - - - - - - - - - - - - NPCBM BECNEDJF_02878 411477.PARMER_01739 0.0 1845.0 28IXK@1|root,2Z8VG@2|Bacteria,4NK45@976|Bacteroidetes,2FWV3@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02879 411477.PARMER_04414 0.0 944.0 COG1012@1|root,COG1012@2|Bacteria,4NEB7@976|Bacteroidetes,2G2XR@200643|Bacteroidia,231K4@171551|Porphyromonadaceae 976|Bacteroidetes C Aldehyde dehydrogenase family - - 1.2.1.21,1.2.1.22 ko:K07248 ko00620,ko00630,ko01120,map00620,map00630,map01120 - R00203,R01333,R01446 RC00080,RC00104,RC00242 ko00000,ko00001,ko01000 - - - Aldedh BECNEDJF_02880 411477.PARMER_04413 2.85e-114 327.0 COG1905@1|root,COG1905@2|Bacteria,4NHIQ@976|Bacteroidetes,2FNZ6@200643|Bacteroidia,22XW4@171551|Porphyromonadaceae 976|Bacteroidetes C Thioredoxin-like [2Fe-2S] ferredoxin hndA - 1.12.1.3 ko:K18330 - - - - ko00000,ko01000 - - - 2Fe-2S_thioredx BECNEDJF_02881 411477.PARMER_04412 0.0 1200.0 COG3383@1|root,COG4624@1|root,COG3383@2|Bacteria,COG4624@2|Bacteria,4PKV4@976|Bacteroidetes,2FNTR@200643|Bacteroidia,22XI7@171551|Porphyromonadaceae 976|Bacteroidetes C Iron hydrogenase small subunit hndD - 1.12.1.3,1.17.1.9 ko:K00123,ko:K18332 ko00630,ko00680,ko01100,ko01120,ko01200,map00630,map00680,map01100,map01120,map01200 - R00519 RC02796 ko00000,ko00001,ko01000 - - - Fe_hyd_SSU,Fe_hyd_lg_C,Fer2_4,Fer4,Fer4_7,Molybdop_Fe4S4,Molybdopterin,Molydop_binding,NADH-G_4Fe-4S_3 BECNEDJF_02882 435591.BDI_1043 1.74e-281 778.0 COG1894@1|root,COG1894@2|Bacteria,4NFB5@976|Bacteroidetes,2FN7A@200643|Bacteroidia,22X6V@171551|Porphyromonadaceae 976|Bacteroidetes C NADH-ubiquinone oxidoreductase-F iron-sulfur binding region nuoF - 1.12.1.3,1.6.5.3 ko:K00335,ko:K18331 ko00190,ko01100,map00190,map01100 M00144 R11945 RC00061 ko00000,ko00001,ko00002,ko01000 3.D.1 - - 2Fe-2S_thioredx,Complex1_51K,Fer4,NADH_4Fe-4S,SLBB BECNEDJF_02885 999419.HMPREF1077_03525 1.45e-151 426.0 COG0036@1|root,COG0036@2|Bacteria,4NDXB@976|Bacteroidetes,2FM7Z@200643|Bacteroidia,22WA0@171551|Porphyromonadaceae 976|Bacteroidetes G Belongs to the ribulose-phosphate 3-epimerase family rpe - 5.1.3.1 ko:K01783 ko00030,ko00040,ko00710,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00030,map00040,map00710,map01100,map01110,map01120,map01130,map01200,map01230 M00004,M00007 R01529 RC00540 ko00000,ko00001,ko00002,ko01000 - - - Ribul_P_3_epim BECNEDJF_02887 411477.PARMER_01815 0.0 1541.0 COG1752@1|root,COG1752@2|Bacteria,4NDXY@976|Bacteroidetes,2FNEV@200643|Bacteroidia,22WBN@171551|Porphyromonadaceae 976|Bacteroidetes M esterase of the alpha-beta hydrolase superfamily - - - ko:K07001 - - - - ko00000 - - - Patatin BECNEDJF_02888 411477.PARMER_01814 0.0 1337.0 COG0326@1|root,COG0326@2|Bacteria,4NDXZ@976|Bacteroidetes,2FMED@200643|Bacteroidia,22W1D@171551|Porphyromonadaceae 976|Bacteroidetes O Molecular chaperone HSP90 htpG - - ko:K04079 ko04141,ko04151,ko04217,ko04612,ko04621,ko04626,ko04657,ko04659,ko04914,ko04915,ko05200,ko05215,ko05418,map04141,map04151,map04217,map04612,map04621,map04626,map04657,map04659,map04914,map04915,map05200,map05215,map05418 - - - ko00000,ko00001,ko01009,ko03029,ko03051,ko03110,ko04131,ko04147 - - - HATPase_c_3,HSP90 BECNEDJF_02889 411477.PARMER_01813 0.0 996.0 COG0591@1|root,COG0591@2|Bacteria,4NIH9@976|Bacteroidetes,2FPM7@200643|Bacteroidia 976|Bacteroidetes E Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family - - - ko:K03307 - - - - ko00000 2.A.21 - - SSF BECNEDJF_02890 411477.PARMER_01812 1.78e-29 104.0 2A7AX@1|root,30W7K@2|Bacteria,4P9K8@976|Bacteroidetes,2FUYZ@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02891 999419.HMPREF1077_02848 8.03e-92 269.0 COG4747@1|root,COG4747@2|Bacteria,4NQIW@976|Bacteroidetes,2FS2U@200643|Bacteroidia,22YFA@171551|Porphyromonadaceae 976|Bacteroidetes S ACT domain protein - - - - - - - - - - - - - BECNEDJF_02892 411477.PARMER_01810 0.0 873.0 COG1541@1|root,COG1541@2|Bacteria,4NGRR@976|Bacteroidetes,2FMB4@200643|Bacteroidia,22WWM@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA) paaK - 6.2.1.30 ko:K01912 ko00360,ko01120,ko05111,map00360,map01120,map05111 - R02539 RC00004,RC00014 ko00000,ko00001,ko01000 - - - AMP-binding,AMP-binding_C_2 BECNEDJF_02895 411477.PARMER_01805 1.16e-300 822.0 COG1757@1|root,COG1757@2|Bacteria,4NFF8@976|Bacteroidetes,2FMFY@200643|Bacteroidia,22X08@171551|Porphyromonadaceae 976|Bacteroidetes C Na H antiporter mleN - - ko:K03315 - - - - ko00000,ko02000 2.A.35 - - Na_H_antiporter BECNEDJF_02896 411477.PARMER_01804 0.0 1739.0 COG4775@1|root,COG4775@2|Bacteria,4NDYT@976|Bacteroidetes,2FMTK@200643|Bacteroidia,22WRF@171551|Porphyromonadaceae 976|Bacteroidetes M CarboxypepD_reg-like domain - - - - - - - - - - - - CarbopepD_reg_2 BECNEDJF_02897 999419.HMPREF1077_01240 6.05e-44 151.0 COG3712@1|root,COG3712@2|Bacteria,4NRWD@976|Bacteroidetes,2FP4Y@200643|Bacteroidia,2304C@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_02898 1123008.KB905697_gene3296 0.0 1532.0 COG1629@1|root,COG1629@2|Bacteria,4NIPG@976|Bacteroidetes,2FRQY@200643|Bacteroidia,22Z8M@171551|Porphyromonadaceae 2|Bacteria P Secretin and TonB N terminus short domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02899 1123008.KB905697_gene3295 0.0 984.0 COG1435@1|root,COG1435@2|Bacteria,4NFWU@976|Bacteroidetes,2FN5G@200643|Bacteroidia 976|Bacteroidetes F SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02900 1235803.C825_04112 0.0 1425.0 COG4946@1|root,COG4946@2|Bacteria,4NJFC@976|Bacteroidetes,2FRXN@200643|Bacteroidia,22Z9Y@171551|Porphyromonadaceae 976|Bacteroidetes M Tricorn protease homolog - - - - - - - - - - - - - BECNEDJF_02901 999419.HMPREF1077_03359 3.38e-313 857.0 COG4946@1|root,COG4946@2|Bacteria,4NJFC@976|Bacteroidetes,2FRXN@200643|Bacteroidia 976|Bacteroidetes M Tricorn protease homolog - - - - - - - - - - - - - BECNEDJF_02902 411477.PARMER_00704 0.0 1234.0 COG1233@1|root,COG1233@2|Bacteria,4PKWE@976|Bacteroidetes,2FNQX@200643|Bacteroidia,231HP@171551|Porphyromonadaceae 976|Bacteroidetes Q FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored BECNEDJF_02903 411477.PARMER_00705 0.0 956.0 COG0657@1|root,COG2755@1|root,COG0657@2|Bacteria,COG2755@2|Bacteria,4NJ8D@976|Bacteroidetes,2FXM8@200643|Bacteroidia 976|Bacteroidetes EI Carboxylesterase family - - - - - - - - - - - - Abhydrolase_3,DLH,Lipase_GDSL_2,Peptidase_S9 BECNEDJF_02905 411477.PARMER_01489 8.39e-144 406.0 COG0778@1|root,COG0778@2|Bacteria,4NP0K@976|Bacteroidetes,2FPFS@200643|Bacteroidia,22XYX@171551|Porphyromonadaceae 976|Bacteroidetes C Nitroreductase family - - - - - - - - - - - - Nitroreductase BECNEDJF_02906 411477.PARMER_01259 3.24e-134 381.0 COG1595@1|root,COG1595@2|Bacteria,4NR7M@976|Bacteroidetes,2FRPH@200643|Bacteroidia,22Y7V@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02907 411477.PARMER_01493 8.63e-224 616.0 COG3712@1|root,COG3712@2|Bacteria,4NKTC@976|Bacteroidetes,2FMS6@200643|Bacteroidia,22XRQ@171551|Porphyromonadaceae 976|Bacteroidetes PT COG3712 Fe2 -dicitrate sensor, membrane component - - - - - - - - - - - - DUF4974,FecR BECNEDJF_02908 411477.PARMER_01494 0.0 2216.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FWW6@200643|Bacteroidia,22X8G@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02909 411477.PARMER_01495 0.0 1235.0 COG1435@1|root,COG1435@2|Bacteria,4NFEY@976|Bacteroidetes,2FPHM@200643|Bacteroidia,22ZE2@171551|Porphyromonadaceae 976|Bacteroidetes F SusD family - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_02910 999419.HMPREF1077_00317 1.45e-159 447.0 28JK0@1|root,30UFS@2|Bacteria,4NPRQ@976|Bacteroidetes,2FSUV@200643|Bacteroidia,22Z99@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3823) - - - - - - - - - - - - DUF3823 BECNEDJF_02911 411477.PARMER_01497 7.85e-290 789.0 COG2152@1|root,COG2152@2|Bacteria,4NG7B@976|Bacteroidetes,2FN5N@200643|Bacteroidia,22X9U@171551|Porphyromonadaceae 976|Bacteroidetes G beta-1,4-mannooligosaccharide phosphorylase - - 3.2.1.197 ko:K21065 - - R11544 RC00049 ko00000,ko01000 - - - Glyco_hydro_130 BECNEDJF_02913 411477.PARMER_04044 3.52e-120 345.0 2924H@1|root,33VNU@2|Bacteria,4P3NC@976|Bacteroidetes,2FQG9@200643|Bacteroidia,230JC@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4251) - - - - - - - - - - - - DUF4251 BECNEDJF_02914 411477.PARMER_04043 1.01e-166 466.0 COG2045@1|root,COG2045@2|Bacteria,4NG1A@976|Bacteroidetes,2FSD1@200643|Bacteroidia,23094@171551|Porphyromonadaceae 976|Bacteroidetes H Belongs to the ComB family comB - 3.1.3.71 ko:K05979 ko00680,ko01120,map00680,map01120 M00358 R05789 RC00428 ko00000,ko00001,ko00002,ko01000 - - - 2-ph_phosp BECNEDJF_02916 547042.BACCOPRO_00811 0.0 995.0 COG0582@1|root,COG0582@2|Bacteria,4NMGI@976|Bacteroidetes,2FMW4@200643|Bacteroidia,4AMFQ@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Phage_int_SAM_5,Phage_integrase BECNEDJF_02917 411477.PARMER_03500 1.3e-218 608.0 COG0673@1|root,COG0673@2|Bacteria,4NGHJ@976|Bacteroidetes,2FQNW@200643|Bacteroidia,22ZVG@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA BECNEDJF_02919 1235788.C802_04114 3.9e-138 433.0 COG1629@1|root,COG4771@2|Bacteria,4NFU8@976|Bacteroidetes,2G2FE@200643|Bacteroidia,4AN3M@815|Bacteroidaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 BECNEDJF_02921 742766.HMPREF9455_03343 3.03e-31 113.0 2EG2T@1|root,33YS7@2|Bacteria,4P43Z@976|Bacteroidetes,2FUCY@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02922 742766.HMPREF9455_03342 4.29e-67 204.0 2D42G@1|root,30WHY@2|Bacteria,4NPCU@976|Bacteroidetes,2FSPJ@200643|Bacteroidia,230JM@171551|Porphyromonadaceae 976|Bacteroidetes S Helix-turn-helix domain - - - - - - - - - - - - HTH_17 BECNEDJF_02923 742766.HMPREF9455_00518 4.51e-82 249.0 2EYUQ@1|root,33S1W@2|Bacteria,4P01W@976|Bacteroidetes,2FM25@200643|Bacteroidia,22Z8Z@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02924 742766.HMPREF9455_00519 2.36e-176 497.0 28HIT@1|root,2Z7U6@2|Bacteria,4NEWV@976|Bacteroidetes,2FQJ5@200643|Bacteroidia,22Z8R@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02925 449673.BACSTE_03782 1.62e-56 179.0 2BJN3@1|root,32DZP@2|Bacteria,4PBFX@976|Bacteroidetes,2FZ0H@200643|Bacteroidia,4AUBB@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02926 742766.HMPREF9455_03718 5.91e-169 482.0 COG3547@1|root,COG3547@2|Bacteria,4NIKY@976|Bacteroidetes,2G38F@200643|Bacteroidia 976|Bacteroidetes L Transposase IS116 IS110 IS902 family - - - - - - - - - - - - DEDD_Tnp_IS110,Transposase_20 BECNEDJF_02928 457424.BFAG_01165 8.48e-28 103.0 COG0789@1|root,COG0789@2|Bacteria,4NREF@976|Bacteroidetes,2FTPY@200643|Bacteroidia 976|Bacteroidetes K MerR HTH family regulatory protein - - - - - - - - - - - - HTH_17 BECNEDJF_02929 742766.HMPREF9455_01713 6.82e-34 119.0 2C174@1|root,32R87@2|Bacteria,4NS22@976|Bacteroidetes,2FT7J@200643|Bacteroidia,22Z1D@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function, B. Theta Gene description (DUF3876) - - - - - - - - - - - - DUF3876 BECNEDJF_02930 742766.HMPREF9455_01714 9.27e-34 119.0 2DVGB@1|root,33VRV@2|Bacteria,4P3BN@976|Bacteroidetes,2FTB9@200643|Bacteroidia,230BM@171551|Porphyromonadaceae 976|Bacteroidetes S Helix-turn-helix domain - - - - - - - - - - - - HTH_17 BECNEDJF_02931 1392489.JPOL01000002_gene531 2.33e-139 405.0 2BHBS@1|root,32BDD@2|Bacteria,4NS36@976|Bacteroidetes,1I33P@117743|Flavobacteriia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02932 449673.BACSTE_03781 8.26e-195 553.0 COG4974@1|root,COG4974@2|Bacteria,4P0EG@976|Bacteroidetes,2G0J5@200643|Bacteroidia,4AV9B@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_02933 449673.BACSTE_03780 1.47e-219 614.0 COG4974@1|root,COG4974@2|Bacteria,4NK1W@976|Bacteroidetes,2FP3J@200643|Bacteroidia,4AP27@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_02934 411477.PARMER_03880 1.48e-149 425.0 COG4152@1|root,COG4152@2|Bacteria,4NEJE@976|Bacteroidetes,2FMK3@200643|Bacteroidia,22WQV@171551|Porphyromonadaceae 976|Bacteroidetes S ABC transporter, ATP-binding protein natA - - ko:K01990 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC_tran,DUF4162 BECNEDJF_02935 411477.PARMER_03881 4.42e-306 835.0 COG1668@1|root,COG1668@2|Bacteria,4NFSZ@976|Bacteroidetes,2FMUF@200643|Bacteroidia,22WPZ@171551|Porphyromonadaceae 976|Bacteroidetes CP ABC transporter permease natB - - ko:K01992 - M00254 - - ko00000,ko00002,ko02000 3.A.1 - - ABC2_membrane_3 BECNEDJF_02938 411477.PARMER_01552 0.0 1276.0 COG0187@1|root,COG0187@2|Bacteria,4NE0P@976|Bacteroidetes,2FPG7@200643|Bacteroidia,22WA1@171551|Porphyromonadaceae 976|Bacteroidetes L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrB - 5.99.1.3 ko:K02470 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseB,DNA_gyraseB_C,HATPase_c,Toprim BECNEDJF_02940 411477.PARMER_01549 1.94e-50 160.0 COG0268@1|root,COG0268@2|Bacteria,4NSB1@976|Bacteroidetes,2FTW4@200643|Bacteroidia,22YCU@171551|Porphyromonadaceae 976|Bacteroidetes J Binds directly to 16S ribosomal RNA rpsT - - ko:K02968 ko03010,map03010 M00178 - - br01610,ko00000,ko00001,ko00002,ko03011 - - - Ribosomal_S20p BECNEDJF_02942 411477.PARMER_01546 2.95e-80 241.0 2CH3Z@1|root,32RP9@2|Bacteria,4NQUA@976|Bacteroidetes,2FS8T@200643|Bacteroidia,22YJ2@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2721) - - - - - - - - - - - - DUF2721 BECNEDJF_02943 999419.HMPREF1077_00242 6.56e-165 462.0 COG1381@1|root,COG1381@2|Bacteria,4NIBQ@976|Bacteroidetes,2FPGE@200643|Bacteroidia,22XU1@171551|Porphyromonadaceae 976|Bacteroidetes L Involved in DNA repair and RecF pathway recombination recO - - ko:K03584 ko03440,map03440 - - - ko00000,ko00001,ko03400 - - - RecO_C,RecO_N BECNEDJF_02945 411477.PARMER_01543 5e-105 303.0 2C6X9@1|root,34AQQ@2|Bacteria,4P6US@976|Bacteroidetes,2G1S8@200643|Bacteroidia,2316B@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_02946 1122931.AUAE01000005_gene3397 5.79e-86 268.0 291SX@1|root,2ZPCV@2|Bacteria,4P7IG@976|Bacteroidetes,2FZBN@200643|Bacteroidia 976|Bacteroidetes S Fimbrillin-A associated anchor proteins Mfa1 and Mfa2 - - - - - - - - - - - - Mfa2 BECNEDJF_02947 411477.PARMER_01541 2.57e-256 700.0 COG1082@1|root,COG1082@2|Bacteria,4NGBE@976|Bacteroidetes,2FNN2@200643|Bacteroidia,22ZAK@171551|Porphyromonadaceae 976|Bacteroidetes G AP endonuclease family 2 C terminus - - - - - - - - - - - - AP_endonuc_2,AP_endonuc_2_N BECNEDJF_02948 411477.PARMER_01540 0.0 1636.0 COG1629@1|root,COG4771@2|Bacteria,4NEIG@976|Bacteroidetes,2FM1K@200643|Bacteroidia,22X66@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3,Plug BECNEDJF_02952 411477.PARMER_03444 0.0 911.0 COG1061@1|root,COG1061@2|Bacteria,4NU9U@976|Bacteroidetes,2FR0U@200643|Bacteroidia,23176@171551|Porphyromonadaceae 976|Bacteroidetes L Helicase associated domain - - - - - - - - - - - - HA,Helicase_C,ResIII BECNEDJF_02953 411477.PARMER_02430 5.44e-228 634.0 COG0534@1|root,COG0534@2|Bacteria,4NKRF@976|Bacteroidetes,2G335@200643|Bacteroidia,231ZT@171551|Porphyromonadaceae 976|Bacteroidetes V Polysaccharide biosynthesis C-terminal domain - - - - - - - - - - - - MatE BECNEDJF_02954 411477.PARMER_02781 0.0 1038.0 COG0673@1|root,COG0673@2|Bacteria,4NIF1@976|Bacteroidetes,2FX47@200643|Bacteroidia 976|Bacteroidetes S Oxidoreductase family, C-terminal alpha/beta domain - - - - - - - - - - - - GFO_IDH_MocA,GFO_IDH_MocA_C BECNEDJF_02955 411477.PARMER_02779 8.54e-231 636.0 2DBNR@1|root,2ZA54@2|Bacteria,4NHW9@976|Bacteroidetes,2FZFG@200643|Bacteroidia,231AZ@171551|Porphyromonadaceae 976|Bacteroidetes S Methane oxygenase PmoA - - - - - - - - - - - - PmoA BECNEDJF_02956 411477.PARMER_02778 3.27e-112 330.0 COG3595@1|root,COG3595@2|Bacteria,4NX4P@976|Bacteroidetes,2G3DB@200643|Bacteroidia,2321K@171551|Porphyromonadaceae 976|Bacteroidetes S Putative auto-transporter adhesin, head GIN domain - - - - - - - - - - - - DUF2807 BECNEDJF_02957 411477.PARMER_02777 1.38e-160 452.0 COG3595@1|root,COG3595@2|Bacteria,4NSAQ@976|Bacteroidetes,2G1GM@200643|Bacteroidia,22YYE@171551|Porphyromonadaceae 976|Bacteroidetes S Putative auto-transporter adhesin, head GIN domain - - - - - - - - - - - - DUF2807 BECNEDJF_02958 411477.PARMER_02776 6.53e-249 682.0 COG0451@1|root,COG0451@2|Bacteria,4NEJJ@976|Bacteroidetes,2FNM5@200643|Bacteroidia,22W40@171551|Porphyromonadaceae 976|Bacteroidetes GM NAD dependent epimerase dehydratase family protein - - 5.1.3.2 ko:K01784 ko00052,ko00520,ko01100,map00052,map00520,map01100 M00361,M00362,M00632 R00291,R02984 RC00289 ko00000,ko00001,ko00002,ko01000 - - - Epimerase BECNEDJF_02959 411477.PARMER_02775 3.23e-37 132.0 COG1121@1|root,COG1121@2|Bacteria,4NHZ9@976|Bacteroidetes,2FM2P@200643|Bacteroidia,22VV3@171551|Porphyromonadaceae 976|Bacteroidetes P ABC transporter, ATP-binding protein znuC - - ko:K09817 ko02010,map02010 M00242 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15.3,3.A.1.15.5 - - ABC_tran BECNEDJF_02960 999419.HMPREF1077_01523 4.47e-178 496.0 COG1121@1|root,COG1121@2|Bacteria,4NHZ9@976|Bacteroidetes,2FM2P@200643|Bacteroidia,22VV3@171551|Porphyromonadaceae 976|Bacteroidetes P ABC transporter, ATP-binding protein znuC - - ko:K09817 ko02010,map02010 M00242 - - ko00000,ko00001,ko00002,ko01000,ko02000 3.A.1.15.3,3.A.1.15.5 - - ABC_tran BECNEDJF_02961 411477.PARMER_02774 5.53e-215 593.0 COG0803@1|root,COG0803@2|Bacteria,4NGMC@976|Bacteroidetes,2FMQR@200643|Bacteroidia,22XUG@171551|Porphyromonadaceae 976|Bacteroidetes P Zinc-uptake complex component A periplasmic mntA - - ko:K09815,ko:K11707 ko02010,map02010 M00242,M00319 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 - - ZnuA BECNEDJF_02963 411477.PARMER_02772 3.82e-258 706.0 COG0793@1|root,COG0793@2|Bacteria,4NFEN@976|Bacteroidetes,2FMMP@200643|Bacteroidia,22WMS@171551|Porphyromonadaceae 976|Bacteroidetes M peptidase S41 - - - - - - - - - - - - Peptidase_S41,Tricorn_C1 BECNEDJF_02964 411477.PARMER_02771 2.53e-208 576.0 29UC5@1|root,30FNJ@2|Bacteria,4NS0Y@976|Bacteroidetes,2FNR7@200643|Bacteroidia,22Y6Z@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3316) - - - - - - - - - - - - DUF3316 BECNEDJF_02965 411477.PARMER_02770 0.0 1767.0 COG0188@1|root,COG0188@2|Bacteria,4NERI@976|Bacteroidetes,2FPAU@200643|Bacteroidia,22WF8@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the type II topoisomerase GyrA ParC subunit family parC - - ko:K02621 - - - - ko00000,ko01000,ko02048,ko03032,ko03036 - - - DNA_topoisoIV BECNEDJF_02966 1235803.C825_01756 1.84e-08 56.6 COG1629@1|root,COG4771@2|Bacteria,4NFU8@976|Bacteroidetes,2G2FE@200643|Bacteroidia 976|Bacteroidetes P TonB-dependent receptor - - - - - - - - - - - - CarbopepD_reg_2 BECNEDJF_02967 411477.PARMER_00919 0.0 945.0 COG1538@1|root,COG1538@2|Bacteria,4NGXM@976|Bacteroidetes,2FMD9@200643|Bacteroidia,22XGY@171551|Porphyromonadaceae 976|Bacteroidetes MU Outer membrane efflux protein - - - - - - - - - - - - OEP BECNEDJF_02968 411477.PARMER_00920 1.26e-16 78.2 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMPG@200643|Bacteroidia,231SJ@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma-54 interaction domain - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat BECNEDJF_02969 411477.PARMER_00920 2.49e-288 790.0 COG2204@1|root,COG2204@2|Bacteria,4NE89@976|Bacteroidetes,2FMPG@200643|Bacteroidia,231SJ@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma-54 interaction domain - - - ko:K02481 - - - - ko00000,ko02022 - - - HTH_8,Response_reg,Sigma54_activat BECNEDJF_02970 411477.PARMER_00921 1.47e-301 823.0 COG5000@1|root,COG5000@2|Bacteria,4NFQN@976|Bacteroidetes,2FQJW@200643|Bacteroidia,22Z6G@171551|Porphyromonadaceae 976|Bacteroidetes T PAS domain - - - - - - - - - - - - HATPase_c,PAS,PAS_8 BECNEDJF_02971 411477.PARMER_00922 3.73e-200 553.0 COG1234@1|root,COG1234@2|Bacteria,4NH9K@976|Bacteroidetes,2FP6X@200643|Bacteroidia,22W15@171551|Porphyromonadaceae 976|Bacteroidetes S Metallo-beta-lactamase superfamily - - 3.1.26.11 ko:K00784 ko03013,map03013 - - - ko00000,ko00001,ko01000,ko03016 - - - Lactamase_B_2 BECNEDJF_02972 411477.PARMER_00923 4.24e-163 457.0 COG0457@1|root,COG0457@2|Bacteria,4NQ8Q@976|Bacteroidetes,2FQ4C@200643|Bacteroidia,22Y4A@171551|Porphyromonadaceae 976|Bacteroidetes S COG NOG28004 non supervised orthologous group - - - ko:K02651 ko04112,map04112 - - - ko00000,ko00001,ko02035,ko02044 - - - TPR_16,TPR_8 BECNEDJF_02973 411477.PARMER_00924 0.0 2144.0 COG0653@1|root,COG0653@2|Bacteria,4NF7C@976|Bacteroidetes,2FMVF@200643|Bacteroidia,22WWV@171551|Porphyromonadaceae 976|Bacteroidetes U Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane secA - - ko:K03070 ko02024,ko03060,ko03070,map02024,map03060,map03070 M00335 - - ko00000,ko00001,ko00002,ko02044 3.A.5.1,3.A.5.10,3.A.5.2,3.A.5.4 - - Helicase_C,SEC-C,SecA_DEAD,SecA_PP_bind,SecA_SW BECNEDJF_02974 411477.PARMER_00925 0.0 1086.0 COG3119@1|root,COG3119@2|Bacteria,4PKER@976|Bacteroidetes,2G3EN@200643|Bacteroidia,22W42@171551|Porphyromonadaceae 976|Bacteroidetes P Type I phosphodiesterase / nucleotide pyrophosphatase pafA - - - - - - - - - - - Phosphodiest BECNEDJF_02975 411477.PARMER_00926 3.35e-284 776.0 28I3N@1|root,2Z87C@2|Bacteria,4NE8P@976|Bacteroidetes,2FMN4@200643|Bacteroidia,22WN0@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4105) - - - - - - - - - - - - DUF4105 BECNEDJF_02976 411477.PARMER_02918 3.34e-122 354.0 COG0530@1|root,COG0530@2|Bacteria,4NFBC@976|Bacteroidetes,2FNX9@200643|Bacteroidia,22XHF@171551|Porphyromonadaceae 976|Bacteroidetes P Sodium/calcium exchanger protein - - - ko:K07301 - - - - ko00000,ko02000 2.A.19.5 - - Na_Ca_ex BECNEDJF_02977 411477.PARMER_02917 1.4e-282 775.0 COG2252@1|root,COG2252@2|Bacteria,4NGCG@976|Bacteroidetes,2FNYM@200643|Bacteroidia,22WKC@171551|Porphyromonadaceae 976|Bacteroidetes S Permease yieG - - ko:K06901 - - - - ko00000,ko02000 2.A.1.40 - - Xan_ur_permease BECNEDJF_02978 411477.PARMER_01948 9.44e-109 313.0 COG1705@1|root,COG1705@2|Bacteria 2|Bacteria NU amidase activity - - - ko:K02395 - - - - ko00000,ko02035 - - - Glucosaminidase,Rod-binding BECNEDJF_02979 411477.PARMER_01947 1.98e-95 279.0 COG0776@1|root,COG0776@2|Bacteria 2|Bacteria L regulation of translation - - - - - - - - - - - - Bac_DNA_binding BECNEDJF_02982 411477.PARMER_01799 1.85e-261 718.0 COG4658@1|root,COG4658@2|Bacteria,4NFGW@976|Bacteroidetes,2FMD0@200643|Bacteroidia,22W1H@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrB - 1.6.5.8 ko:K00347 - - - - ko00000,ko01000 - - - NQR2_RnfD_RnfE BECNEDJF_02983 411477.PARMER_01798 1.34e-193 537.0 COG1592@1|root,COG2869@1|root,COG1592@2|Bacteria,COG2869@2|Bacteria,4NF7A@976|Bacteroidetes,2FMQM@200643|Bacteroidia,22XWP@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrC - 1.6.5.8 ko:K00348 - - - - ko00000,ko01000 - - - FMN_bind BECNEDJF_02984 1121129.KB903359_gene1569 0.0 942.0 COG0188@1|root,COG0188@2|Bacteria,4NDWQ@976|Bacteroidetes,2FMCP@200643|Bacteroidia,22WV3@171551|Porphyromonadaceae 976|Bacteroidetes L A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner gyrA - 5.99.1.3 ko:K02469 - - - - ko00000,ko01000,ko03032,ko03400 - - - DNA_gyraseA_C,DNA_topoisoIV BECNEDJF_02985 411477.PARMER_04136 6.73e-133 377.0 COG1595@1|root,COG1595@2|Bacteria,4NWCP@976|Bacteroidetes,2G33Z@200643|Bacteroidia,231ZX@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_02986 411477.PARMER_04138 1.82e-228 629.0 COG3712@1|root,COG3712@2|Bacteria,4NKNV@976|Bacteroidetes,2FQUH@200643|Bacteroidia,22ZEF@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_02987 411477.PARMER_04139 0.0 2147.0 COG4206@1|root,COG4206@2|Bacteria,4P258@976|Bacteroidetes,2FW53@200643|Bacteroidia,22W05@171551|Porphyromonadaceae 976|Bacteroidetes H TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_02988 411477.PARMER_04140 0.0 1118.0 COG0702@1|root,COG0702@2|Bacteria,4PKTF@976|Bacteroidetes,2G0HN@200643|Bacteroidia,231PE@171551|Porphyromonadaceae 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_02989 411477.PARMER_04141 0.0 1100.0 COG3408@1|root,COG3408@2|Bacteria,4NGV6@976|Bacteroidetes,2FPWP@200643|Bacteroidia,22W1W@171551|Porphyromonadaceae 976|Bacteroidetes G Glycogen debranching enzyme hypBA2 - - - - - - - - - - - BNR_2,GDE_C BECNEDJF_02990 411477.PARMER_04142 1.14e-35 133.0 COG3533@1|root,COG3533@2|Bacteria,4NFW3@976|Bacteroidetes,2FM1I@200643|Bacteroidia,22WXF@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - ko:K09955 - - - - ko00000 - - - Glyco_hydro_127 BECNEDJF_02991 226186.BT_4739 1.38e-180 509.0 COG4974@1|root,COG4974@2|Bacteria,4NX3Q@976|Bacteroidetes,2G3F8@200643|Bacteroidia,4AV1J@815|Bacteroidaceae 976|Bacteroidetes L Belongs to the 'phage' integrase family - - - - - - - - - - - - Arm-DNA-bind_5,Phage_int_SAM_5,Phage_integrase BECNEDJF_02992 1536772.R70723_00975 0.00038 46.2 2DJSI@1|root,3076N@2|Bacteria,1U14I@1239|Firmicutes,4IAKE@91061|Bacilli,272X3@186822|Paenibacillaceae 91061|Bacilli S Uncharacterised protein family (UPF0158) - - - - - - - - - - - - UPF0158 BECNEDJF_02993 411477.PARMER_02160 0.0 967.0 COG0673@1|root,COG0673@2|Bacteria,4NF3G@976|Bacteroidetes,2FN3V@200643|Bacteroidia,22VW2@171551|Porphyromonadaceae 976|Bacteroidetes S hydrolase activity, acting on glycosyl bonds nagA - - - - - - - - - - - GFO_IDH_MocA BECNEDJF_02994 411477.PARMER_02161 1.83e-292 800.0 COG0513@1|root,COG0513@2|Bacteria,4NEVI@976|Bacteroidetes,2FM7Y@200643|Bacteroidia,22W9M@171551|Porphyromonadaceae 976|Bacteroidetes L Belongs to the DEAD box helicase family rhlE - 3.6.4.13 ko:K11927 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03019 - - - DEAD,Helicase_C BECNEDJF_02995 411477.PARMER_02162 0.0 1209.0 COG0514@1|root,COG0514@2|Bacteria,4NG10@976|Bacteroidetes,2FPSQ@200643|Bacteroidia,22XF8@171551|Porphyromonadaceae 976|Bacteroidetes L RQC recQ3 - 3.6.4.12 ko:K03654 ko03018,map03018 - - - ko00000,ko00001,ko01000,ko03400 - - - DEAD,HRDC,HTH_40,Helicase_C,RQC,RecQ_Zn_bind BECNEDJF_02996 411477.PARMER_02163 6.68e-245 672.0 COG1376@1|root,COG1376@2|Bacteria,4NHZG@976|Bacteroidetes,2FN2P@200643|Bacteroidia,22X9Y@171551|Porphyromonadaceae 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD BECNEDJF_02997 999419.HMPREF1077_02533 4.38e-162 455.0 COG1376@1|root,COG1376@2|Bacteria,4NNX7@976|Bacteroidetes,2FM99@200643|Bacteroidia,22XQ2@171551|Porphyromonadaceae 976|Bacteroidetes S L,D-transpeptidase catalytic domain - - - - - - - - - - - - YkuD_2 BECNEDJF_02998 411477.PARMER_02166 4.33e-125 357.0 COG0115@1|root,COG0115@2|Bacteria,4NSFJ@976|Bacteroidetes,2FNQJ@200643|Bacteroidia,22YIQ@171551|Porphyromonadaceae 976|Bacteroidetes EH Amino-transferase class IV - - 4.1.3.38 ko:K02619 ko00790,map00790 - R05553 RC01843,RC02148 ko00000,ko00001,ko01000 - - - Aminotran_4 BECNEDJF_02999 411477.PARMER_02167 4.19e-239 657.0 COG0147@1|root,COG0147@2|Bacteria,4NFKB@976|Bacteroidetes,2FMRN@200643|Bacteroidia,22WC0@171551|Porphyromonadaceae 976|Bacteroidetes EH component I pabB - 2.6.1.85 ko:K01665 ko00790,map00790 - R01716 RC00010,RC01418 ko00000,ko00001,ko01000 - - - Chorismate_bind BECNEDJF_03000 411477.PARMER_02168 1.37e-216 597.0 COG0388@1|root,COG0388@2|Bacteria,4NEME@976|Bacteroidetes,2FMCZ@200643|Bacteroidia,22W1N@171551|Porphyromonadaceae 976|Bacteroidetes S Hydrolase, carbon-nitrogen family pabB - 3.5.1.53 ko:K12251 ko00330,ko01100,map00330,map01100 - R01152 RC00096 ko00000,ko00001,ko01000 - - - CN_hydrolase BECNEDJF_03001 411477.PARMER_02169 7.72e-257 703.0 COG2957@1|root,COG2957@2|Bacteria,4NGF8@976|Bacteroidetes,2FMQH@200643|Bacteroidia,22X7U@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the agmatine deiminase family aguA - 3.5.3.12 ko:K10536 ko00330,ko01100,map00330,map01100 - R01416 RC00177 ko00000,ko00001,ko01000 - - - PAD_porph BECNEDJF_03002 411477.PARMER_02170 0.0 998.0 COG3831@1|root,COG3831@2|Bacteria,4NJPG@976|Bacteroidetes,2FPJ3@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - WGR BECNEDJF_03003 411477.PARMER_02380 0.0 1040.0 COG5016@1|root,COG5016@2|Bacteria,4PKTH@976|Bacteroidetes,2G35Q@200643|Bacteroidia,22WXX@171551|Porphyromonadaceae 976|Bacteroidetes C Conserved carboxylase domain - - 4.1.1.3,6.4.1.1 ko:K01571,ko:K01960 ko00020,ko00620,ko00720,ko01100,ko01120,ko01200,ko01230,map00020,map00620,map00720,map01100,map01120,map01200,map01230 M00173,M00620 R00217,R00344 RC00040,RC00367 ko00000,ko00001,ko00002,ko01000,ko02000 3.B.1.1.1 - - Biotin_lipoyl,Biotin_lipoyl_2,HMGL-like,PYC_OADA BECNEDJF_03004 411477.PARMER_02382 0.0 1006.0 COG4735@1|root,COG4735@2|Bacteria,4NF74@976|Bacteroidetes,2FM2A@200643|Bacteroidia,22WRJ@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location - - - - - - - - - - - - - BECNEDJF_03009 411477.PARMER_02389 2.53e-265 728.0 COG0845@1|root,COG0845@2|Bacteria,4NEXN@976|Bacteroidetes,2FRWB@200643|Bacteroidia,231FI@171551|Porphyromonadaceae 976|Bacteroidetes M Biotin-lipoyl like - - - ko:K03585 ko01501,ko01503,map01501,map01503 M00646,M00647,M00699,M00718 - - ko00000,ko00001,ko00002,ko01504,ko02000,ko03036 2.A.6.2,8.A.1.6 - - Biotin_lipoyl,Biotin_lipoyl_2,HlyD_3,HlyD_D23 BECNEDJF_03010 411477.PARMER_02390 0.0 1951.0 COG0841@1|root,COG0841@2|Bacteria,4NDZG@976|Bacteroidetes,2FM3B@200643|Bacteroidia,22WZM@171551|Porphyromonadaceae 976|Bacteroidetes V Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family - - - ko:K03296 - - - - ko00000 2.A.6.2 - - ACR_tran,OEP BECNEDJF_03011 411477.PARMER_02391 0.0 944.0 COG1538@1|root,COG1538@2|Bacteria,4NDZK@976|Bacteroidetes,2FND5@200643|Bacteroidia,22W3J@171551|Porphyromonadaceae 976|Bacteroidetes MU Efflux transporter, outer membrane factor - - - - - - - - - - - - OEP BECNEDJF_03013 411477.PARMER_04085 9.57e-221 610.0 COG1932@1|root,COG1932@2|Bacteria,4NE06@976|Bacteroidetes,2FMET@200643|Bacteroidia,22WAK@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine serC - 2.6.1.52 ko:K00831 ko00260,ko00680,ko00750,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map00750,map01100,map01120,map01130,map01200,map01230 M00020,M00124 R04173,R05085 RC00006,RC00036 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_5 BECNEDJF_03014 411477.PARMER_04084 3.08e-212 587.0 COG1052@1|root,COG1052@2|Bacteria,4NFDE@976|Bacteroidetes,2FP6R@200643|Bacteroidia,22WZN@171551|Porphyromonadaceae 976|Bacteroidetes CH Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family serA - 1.1.1.399,1.1.1.95 ko:K00058 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R01513 RC00031 ko00000,ko00001,ko00002,ko01000,ko04147 - - - 2-Hacid_dh,2-Hacid_dh_C BECNEDJF_03015 999419.HMPREF1077_03181 9.78e-301 830.0 COG0507@1|root,COG1112@1|root,COG0507@2|Bacteria,COG1112@2|Bacteria,4NEK7@976|Bacteroidetes,2FM7P@200643|Bacteroidia,22WIF@171551|Porphyromonadaceae 976|Bacteroidetes L AAA domain - - - - - - - - - - - - AAA_11,AAA_12 BECNEDJF_03016 435591.BDI_3442 9.41e-78 244.0 2BZEB@1|root,2ZMZD@2|Bacteria,4NMWK@976|Bacteroidetes,2FQNP@200643|Bacteroidia,22XQ3@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF1573) - - - - - - - - - - - - DUF1573 BECNEDJF_03018 411477.PARMER_02698 1.17e-46 170.0 COG3391@1|root,COG3391@2|Bacteria,4NSU5@976|Bacteroidetes,2FS0J@200643|Bacteroidia,230NQ@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4221) - - - - - - - - - - - - DUF4221 BECNEDJF_03019 411477.PARMER_02422 1.83e-297 811.0 COG0561@1|root,COG2050@1|root,COG0561@2|Bacteria,COG2050@2|Bacteria,4NNYG@976|Bacteroidetes,2FPKD@200643|Bacteroidia,22XIM@171551|Porphyromonadaceae 976|Bacteroidetes Q Thioesterase superfamily ydiI - 3.1.2.28 ko:K19222 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00116 R07262 RC00004,RC00174 ko00000,ko00001,ko00002,ko01000 - - - 4HBT,Hydrolase_3 BECNEDJF_03020 411477.PARMER_02421 1.33e-278 760.0 COG1169@1|root,COG1169@2|Bacteria,4NF6U@976|Bacteroidetes,2FNBU@200643|Bacteroidia,22XSX@171551|Porphyromonadaceae 976|Bacteroidetes HQ Isochorismate synthase entC - 5.4.4.2 ko:K02361,ko:K02552 ko00130,ko01053,ko01100,ko01110,ko01130,map00130,map01053,map01100,map01110,map01130 M00116 R01717 RC00588 ko00000,ko00001,ko00002,ko01000 - - - Chorismate_bind BECNEDJF_03021 411477.PARMER_02420 2.36e-219 605.0 COG0031@1|root,COG0031@2|Bacteria,4NDZ9@976|Bacteroidetes,2FME4@200643|Bacteroidia,22WCJ@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the cysteine synthase cystathionine beta- synthase family cysK - 2.5.1.47 ko:K01738,ko:K12339 ko00270,ko00920,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,map00270,map00920,map01100,map01110,map01120,map01130,map01200,map01230 M00021 R00897,R03132,R03601,R04859 RC00020,RC02814,RC02821,RC02876 ko00000,ko00001,ko00002,ko01000 - - - PALP BECNEDJF_03022 411477.PARMER_02418 1.83e-232 638.0 COG3828@1|root,COG3828@2|Bacteria,4NFMU@976|Bacteroidetes,2FN9Z@200643|Bacteroidia 976|Bacteroidetes S Trehalose utilisation - - - - - - - - - - - - ThuA BECNEDJF_03024 411477.PARMER_02419 5.68e-217 598.0 2C23X@1|root,31B63@2|Bacteria,4NS2W@976|Bacteroidetes,2FT67@200643|Bacteroidia,22YVH@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_03025 411477.PARMER_02417 0.0 972.0 COG0038@1|root,COG0038@2|Bacteria,4NFCF@976|Bacteroidetes,2FP79@200643|Bacteroidia,22W38@171551|Porphyromonadaceae 976|Bacteroidetes P Voltage gated chloride channel - - - ko:K03281 - - - - ko00000 2.A.49 - - TrkA_C,Voltage_CLC BECNEDJF_03026 999419.HMPREF1077_03189 6.35e-146 412.0 2E6TM@1|root,331DG@2|Bacteria,4NYW8@976|Bacteroidetes,2G1IJ@200643|Bacteroidia,22YZI@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF2490) - - - - - - - - - - - - DUF2490 BECNEDJF_03027 411477.PARMER_00280 3.57e-143 405.0 COG0684@1|root,COG0684@2|Bacteria,4NHRR@976|Bacteroidetes,2FWCP@200643|Bacteroidia 976|Bacteroidetes H Aldolase/RraA - - 4.1.3.17 ko:K10218 ko00362,ko00660,ko01120,map00362,map00660,map01120 - R00008,R00350 RC00067,RC00502,RC01205 ko00000,ko00001,ko01000 - - - RraA-like BECNEDJF_03028 411477.PARMER_00279 1.95e-295 804.0 COG4948@1|root,COG4948@2|Bacteria,4NIIJ@976|Bacteroidetes,2FUG5@200643|Bacteroidia 976|Bacteroidetes M Mandelate racemase / muconate lactonizing enzyme, N-terminal domain - - 4.2.1.6 ko:K01684 ko00052,ko01100,ko01120,map00052,map01100,map01120 M00552 R03033 RC00543 ko00000,ko00001,ko00002,ko01000 - - - MR_MLE_C,MR_MLE_N BECNEDJF_03029 411477.PARMER_00278 2.06e-188 523.0 COG1028@1|root,COG1028@2|Bacteria,4NHJ9@976|Bacteroidetes,2FWNX@200643|Bacteroidia 976|Bacteroidetes IQ KR domain - - - - - - - - - - - - adh_short_C2 BECNEDJF_03030 411477.PARMER_00277 0.0 988.0 COG4146@1|root,COG4146@2|Bacteria,4NE9S@976|Bacteroidetes,2FNXT@200643|Bacteroidia,22XEJ@171551|Porphyromonadaceae 976|Bacteroidetes S Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family sglT - - ko:K03307 - - - - ko00000 2.A.21 - - SSF BECNEDJF_03031 1235803.C825_05224 0.0 1588.0 COG3250@1|root,COG3250@2|Bacteria,4NHBP@976|Bacteroidetes,2FN8A@200643|Bacteroidia,2307E@171551|Porphyromonadaceae 976|Bacteroidetes G Beta galactosidase small chain - - - - - - - - - - - - Bgal_small_N,Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_03032 411477.PARMER_00273 6.34e-231 637.0 COG3579@1|root,COG3579@2|Bacteria,4NE02@976|Bacteroidetes,2FPW0@200643|Bacteroidia,22WUF@171551|Porphyromonadaceae 976|Bacteroidetes E Papain family cysteine protease - - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1,Peptidase_C1_2 BECNEDJF_03033 999419.HMPREF1077_01687 3.86e-40 142.0 COG3579@1|root,COG3579@2|Bacteria,4NE02@976|Bacteroidetes,2FPW0@200643|Bacteroidia,22WUF@171551|Porphyromonadaceae 976|Bacteroidetes E Papain family cysteine protease - - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1,Peptidase_C1_2 BECNEDJF_03034 411477.PARMER_00272 0.0 1081.0 COG4690@1|root,COG4690@2|Bacteria,4NEQE@976|Bacteroidetes,2FN3E@200643|Bacteroidia,22XFY@171551|Porphyromonadaceae 976|Bacteroidetes M Peptidase family C69 - - - - - - - - - - - - Peptidase_C69 BECNEDJF_03035 411477.PARMER_00271 0.0 1072.0 COG3525@1|root,COG3525@2|Bacteria,4NHSY@976|Bacteroidetes,2FPK5@200643|Bacteroidia,22Z51@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 20, catalytic domain - - 3.2.1.52 ko:K12373 ko00511,ko00513,ko00520,ko00531,ko00603,ko00604,ko01100,ko04142,map00511,map00513,map00520,map00531,map00603,map00604,map01100,map04142 M00079 R00022,R06004,R11316 RC00049 ko00000,ko00001,ko00002,ko01000,ko03110 - GH20 - Glyco_hydro_20,Glyco_hydro_20b BECNEDJF_03037 411477.PARMER_00693 0.0 926.0 COG0531@1|root,COG0531@2|Bacteria,4NDU2@976|Bacteroidetes,2FPUV@200643|Bacteroidia,22WHW@171551|Porphyromonadaceae 976|Bacteroidetes E C-terminus of AA_permease - - - ko:K03294 - - - - ko00000 2.A.3.2 - - AA_permease,AA_permease_2 BECNEDJF_03038 762968.HMPREF9441_03427 6.85e-196 549.0 COG3943@1|root,COG3943@2|Bacteria,4NEGN@976|Bacteroidetes,2FM81@200643|Bacteroidia 976|Bacteroidetes S Toxin-antitoxin system, toxin component, Fic - - - - - - - - - - - - Virulence_RhuM BECNEDJF_03039 1268240.ATFI01000008_gene2398 0.0 899.0 COG0286@1|root,COG0286@2|Bacteria,4NG0E@976|Bacteroidetes,2FNN6@200643|Bacteroidia,4ANZD@815|Bacteroidaceae 976|Bacteroidetes V COG0286 Type I restriction-modification system methyltransferase subunit hsdM - 2.1.1.72 ko:K03427 - - - - ko00000,ko01000,ko02048 - - - HsdM_N,N6_Mtase BECNEDJF_03040 762968.HMPREF9441_03430 2.33e-122 353.0 COG0790@1|root,COG0790@2|Bacteria,4NPJM@976|Bacteroidetes,2FRUB@200643|Bacteroidia 976|Bacteroidetes S T5orf172 - - - - - - - - - - - - T5orf172 BECNEDJF_03041 762968.HMPREF9441_03432 0.0 1420.0 COG0610@1|root,COG0610@2|Bacteria,4NFJ8@976|Bacteroidetes,2FMP6@200643|Bacteroidia 976|Bacteroidetes L Subunit R is required for both nuclease and ATPase activities, but not for modification hsdR - 3.1.21.3 ko:K01153 - - - - ko00000,ko01000,ko02048 - - - EcoR124_C,HSDR_N,ResIII BECNEDJF_03042 999419.HMPREF1077_00353 2.32e-199 552.0 COG2890@1|root,COG2890@2|Bacteria,4NDZB@976|Bacteroidetes,2FM3H@200643|Bacteroidia,22XPT@171551|Porphyromonadaceae 976|Bacteroidetes J Methylates the class 1 translation termination release factors RF1 PrfA and RF2 PrfB on the glutamine residue of the universally conserved GGQ motif prmC GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0008150,GO:0008152,GO:0008168,GO:0008757,GO:0016740,GO:0016741,GO:0032259,GO:0044424,GO:0044444,GO:0044464 2.1.1.297 ko:K02493 - - R10806 RC00003,RC03279 ko00000,ko01000,ko03012 - - - MTS BECNEDJF_03043 411477.PARMER_01451 2.02e-107 310.0 COG2137@1|root,COG2137@2|Bacteria,4NSAS@976|Bacteroidetes,2FS4X@200643|Bacteroidia,22YE0@171551|Porphyromonadaceae 976|Bacteroidetes S Modulates RecA activity recX - - ko:K03565 - - - - ko00000,ko03400 - - - RecX BECNEDJF_03044 999419.HMPREF1077_00351 2.38e-157 442.0 COG1040@1|root,COG1040@2|Bacteria,4NNI1@976|Bacteroidetes,2FP14@200643|Bacteroidia,22XYS@171551|Porphyromonadaceae 976|Bacteroidetes S Phosphoribosyl transferase domain comF - 2.4.2.14 ko:K00764 ko00230,ko00250,ko01100,ko01110,ko01130,map00230,map00250,map01100,map01110,map01130 M00048 R01072 RC00010,RC02724,RC02752 ko00000,ko00001,ko00002,ko01000,ko01002 - - - Pribosyltran BECNEDJF_03045 411477.PARMER_01453 1.51e-147 416.0 COG0461@1|root,COG0461@2|Bacteria,4NEF8@976|Bacteroidetes,2FMTB@200643|Bacteroidia,22XEK@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP) pyrE - 2.4.2.10,4.1.1.23 ko:K00762,ko:K13421 ko00240,ko00983,ko01100,map00240,map00983,map01100 M00051 R00965,R01870,R08231 RC00063,RC00409,RC00611 ko00000,ko00001,ko00002,ko01000 - - - OMPdecase,Pribosyltran BECNEDJF_03046 411477.PARMER_01454 5.05e-93 271.0 COG3427@1|root,COG3427@2|Bacteria,4NT9F@976|Bacteroidetes,2G2KQ@200643|Bacteroidia,231XE@171551|Porphyromonadaceae 976|Bacteroidetes E oxidoreductase activity, acting on CH-OH group of donors - - - - - - - - - - - - Polyketide_cyc2 BECNEDJF_03047 411477.PARMER_01455 0.0 876.0 COG0165@1|root,COG0165@2|Bacteria,4NFCY@976|Bacteroidetes,2FPNB@200643|Bacteroidia,22WJN@171551|Porphyromonadaceae 976|Bacteroidetes E argininosuccinate lyase argH GO:0003674,GO:0003824,GO:0004056,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016829,GO:0016840,GO:0016842,GO:0019752,GO:0042450,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 4.3.2.1 ko:K01755 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,map00220,map00250,map01100,map01110,map01130,map01230 M00029,M00844,M00845 R01086 RC00445,RC00447 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Lyase_1 BECNEDJF_03048 411477.PARMER_01456 1.03e-110 317.0 COG2146@1|root,COG2146@2|Bacteria,4NWQ5@976|Bacteroidetes,2FUP8@200643|Bacteroidia,22YSX@171551|Porphyromonadaceae 976|Bacteroidetes P nitrite reductase [NAD(P)H] activity - - - - - - - - - - - - Rieske BECNEDJF_03050 411477.PARMER_01312 0.0 1491.0 COG0209@1|root,COG0209@2|Bacteria,4NEHQ@976|Bacteroidetes,2FN30@200643|Bacteroidia,22W6K@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and or for immediate growth after restoration of oxygen nrd - 1.17.4.1 ko:K00525 ko00230,ko00240,ko01100,map00230,map00240,map01100 M00053 R02017,R02018,R02019,R02024 RC00613 ko00000,ko00001,ko00002,ko01000,ko03400 - - - Ribonuc_red_lgC,Ribonuc_red_lgN BECNEDJF_03051 411477.PARMER_01311 0.0 1852.0 COG1640@1|root,COG1640@2|Bacteria,4NF7Z@976|Bacteroidetes,2FMBZ@200643|Bacteroidia,22WJ2@171551|Porphyromonadaceae 976|Bacteroidetes G 4-alpha-glucanotransferase malQ - 2.4.1.25 ko:K00705 ko00500,ko01100,map00500,map01100 - R05196 RC00049 ko00000,ko00001,ko01000 - GH77 - CBM_20,Glyco_hydro_77 BECNEDJF_03052 411477.PARMER_01310 2.23e-152 436.0 COG5263@1|root,COG5263@2|Bacteria 2|Bacteria S dextransucrase activity - - - - - - - - - - - - CW_binding_1,Glug,Peptidase_C39_2,Peptidase_S9,SLH,YSIRK_signal BECNEDJF_03053 411477.PARMER_01310 1.69e-113 335.0 COG5263@1|root,COG5263@2|Bacteria 2|Bacteria S dextransucrase activity - - - - - - - - - - - - CW_binding_1,Glug,Peptidase_C39_2,Peptidase_S9,SLH,YSIRK_signal BECNEDJF_03054 411477.PARMER_01309 2.96e-56 177.0 COG1664@1|root,COG1664@2|Bacteria,4NUZA@976|Bacteroidetes,2FUPU@200643|Bacteroidia,22YMZ@171551|Porphyromonadaceae 976|Bacteroidetes M Integral membrane protein CcmA involved in cell shape determination - - - - - - - - - - - - Bactofilin BECNEDJF_03055 411477.PARMER_01308 7.67e-80 237.0 COG1539@1|root,COG1539@2|Bacteria,4NQ53@976|Bacteroidetes,2FSRG@200643|Bacteroidia,22YF6@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin folB - 1.13.11.81,4.1.2.25,5.1.99.8 ko:K01633 ko00790,ko01100,map00790,map01100 M00126,M00840 R03504,R11037,R11073 RC00721,RC00943,RC01479,RC03333,RC03334 ko00000,ko00001,ko00002,ko01000 - - - FolB BECNEDJF_03056 411477.PARMER_01307 0.0 881.0 COG1142@1|root,COG4624@1|root,COG1142@2|Bacteria,COG4624@2|Bacteria,4NGF4@976|Bacteroidetes,2FPND@200643|Bacteroidia,22WV7@171551|Porphyromonadaceae 976|Bacteroidetes C Hydrogenase - - - - - - - - - - - - Fe_hyd_lg_C,Fer4 BECNEDJF_03057 411477.PARMER_01306 7.07e-313 850.0 28HW2@1|root,2Z825@2|Bacteria,4NF6G@976|Bacteroidetes,2FMR4@200643|Bacteroidia,22X2Q@171551|Porphyromonadaceae 976|Bacteroidetes S Peptide-N-glycosidase F, N terminal - - - - - - - - - - - - N-glycanase_C,N-glycanase_N BECNEDJF_03058 999419.HMPREF1077_00479 2.59e-144 407.0 COG2095@1|root,COG2095@2|Bacteria,4NIHF@976|Bacteroidetes,2FMIJ@200643|Bacteroidia,22XS3@171551|Porphyromonadaceae 976|Bacteroidetes U MarC family integral membrane protein - - - ko:K05595 - - - - ko00000,ko02000 2.A.95.1 - - MarC BECNEDJF_03060 411477.PARMER_01303 1.35e-266 728.0 COG1216@1|root,COG1216@2|Bacteria,4NFP0@976|Bacteroidetes,2FN97@200643|Bacteroidia,22WGJ@171551|Porphyromonadaceae 976|Bacteroidetes S glycosyl transferase family 2 - - - ko:K07011 - - - - ko00000 - - - Glycos_transf_2 BECNEDJF_03061 411477.PARMER_01302 1.33e-224 618.0 COG1560@1|root,COG1560@2|Bacteria,4NGQU@976|Bacteroidetes,2FPU3@200643|Bacteroidia,22WWZ@171551|Porphyromonadaceae 976|Bacteroidetes M Lipid A Biosynthesis waaM - 2.3.1.241 ko:K02517 ko00540,ko01100,map00540,map01100 M00060 R05146 RC00037,RC00039 ko00000,ko00001,ko00002,ko01000,ko01005 - - - Lip_A_acyltrans BECNEDJF_03062 411477.PARMER_01301 0.0 880.0 COG0621@1|root,COG0621@2|Bacteria,4NE0R@976|Bacteroidetes,2FM1T@200643|Bacteroidia,22XEW@171551|Porphyromonadaceae 976|Bacteroidetes J Fe-S oxidoreductase yqeV - 2.8.4.5 ko:K18707 - - R10649 RC00003,RC03221 ko00000,ko01000,ko03016 - - - Radical_SAM,UPF0004 BECNEDJF_03063 411477.PARMER_01300 1.23e-294 803.0 COG1317@1|root,COG1317@2|Bacteria,4NWPE@976|Bacteroidetes,2G39N@200643|Bacteroidia,2303S@171551|Porphyromonadaceae 976|Bacteroidetes NU Lipid A 3-O-deacylase (PagL) - - - - - - - - - - - - PagL BECNEDJF_03064 411477.PARMER_01299 0.0 1108.0 COG1022@1|root,COG1022@2|Bacteria,4NGFQ@976|Bacteroidetes,2FN1X@200643|Bacteroidia,22W8F@171551|Porphyromonadaceae 976|Bacteroidetes I Long-chain fatty acid--CoA ligase - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding BECNEDJF_03066 411477.PARMER_01297 0.0 1382.0 COG1629@1|root,COG1629@2|Bacteria,COG4771@2|Bacteria,4P0XV@976|Bacteroidetes,2FWCI@200643|Bacteroidia,22ZUA@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - OMP_b-brl_3 BECNEDJF_03067 411477.PARMER_01296 9.08e-238 653.0 COG0078@1|root,COG0078@2|Bacteria,4NEYX@976|Bacteroidetes,2FNR9@200643|Bacteroidia,22WE0@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the ATCase OTCase family argF GO:0000050,GO:0003674,GO:0003824,GO:0004585,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006525,GO:0006526,GO:0006591,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016740,GO:0016741,GO:0016743,GO:0019627,GO:0019752,GO:0034641,GO:0042450,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046394,GO:0071704,GO:0071941,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.1.3.11,2.1.3.9 ko:K09065,ko:K13043 ko00220,ko01100,ko01230,map00220,map01100,map01230 M00845 R07245,R08937 RC00096 ko00000,ko00001,ko00002,ko01000 - - - OTCace,OTCace_N BECNEDJF_03068 411477.PARMER_01295 5.64e-294 803.0 COG0014@1|root,COG0014@2|Bacteria,4NEPQ@976|Bacteroidetes,2FN24@200643|Bacteroidia,22WMQ@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the NADPH-dependent reduction of L-glutamate 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5- carboxylate proA GO:0003674,GO:0003824,GO:0004350,GO:0008150,GO:0008152,GO:0016491,GO:0016620,GO:0016903,GO:0055114 1.2.1.41 ko:K00147 ko00330,ko00332,ko01100,ko01110,ko01130,ko01230,map00330,map00332,map01100,map01110,map01130,map01230 M00015 R03313 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Aldedh BECNEDJF_03069 411477.PARMER_01294 2.2e-259 711.0 COG0263@1|root,COG0263@2|Bacteria,4NH75@976|Bacteroidetes,2FM31@200643|Bacteroidia,22WGI@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate proB GO:0003674,GO:0003824,GO:0004349,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006560,GO:0006561,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009064,GO:0009084,GO:0009987,GO:0016053,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016774,GO:0018130,GO:0019202,GO:0019752,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 2.7.2.11 ko:K00931 ko00330,ko00332,ko01100,ko01130,ko01230,map00330,map00332,map01100,map01130,map01230 M00015 R00239 RC00002,RC00043 ko00000,ko00001,ko00002,ko01000 - - - AA_kinase,PUA BECNEDJF_03070 411477.PARMER_01293 0.0 1143.0 COG0365@1|root,COG0365@2|Bacteria,4NEAD@976|Bacteroidetes,2FNEM@200643|Bacteroidia,22VYT@171551|Porphyromonadaceae 976|Bacteroidetes I AMP-binding enzyme C-terminal domain acsA - 6.2.1.1,6.2.1.32 ko:K01895,ko:K08295 ko00010,ko00620,ko00627,ko00640,ko00680,ko00720,ko01100,ko01110,ko01120,ko01130,ko01200,map00010,map00620,map00627,map00640,map00680,map00720,map01100,map01110,map01120,map01130,map01200 M00357 R00235,R00236,R00316,R00926,R00982,R01354 RC00004,RC00012,RC00043,RC00070,RC00174,RC02746,RC02816 ko00000,ko00001,ko00002,ko01000,ko01004 - - - AMP-binding,AMP-binding_C BECNEDJF_03071 411477.PARMER_01292 3.66e-127 362.0 COG1396@1|root,COG1917@1|root,COG1396@2|Bacteria,COG1917@2|Bacteria,4NNDM@976|Bacteroidetes,2FP7C@200643|Bacteroidia,22XSH@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - Cupin_2,HTH_19,HTH_3,HTH_31 BECNEDJF_03072 411477.PARMER_01290 1.08e-39 131.0 COG1141@1|root,COG1141@2|Bacteria,4P7D9@976|Bacteroidetes,2FZ83@200643|Bacteroidia 976|Bacteroidetes C 4Fe-4S single cluster domain of Ferredoxin I - - - - - - - - - - - - Fer4_13 BECNEDJF_03073 411477.PARMER_01289 0.0 1098.0 COG1012@1|root,COG1012@2|Bacteria,4NFTW@976|Bacteroidetes,2FQQ7@200643|Bacteroidia,22WBS@171551|Porphyromonadaceae 976|Bacteroidetes C 1-pyrroline-5-carboxylate dehydrogenase pruA - 1.2.1.88,1.5.5.2 ko:K00294,ko:K13821 ko00250,ko00330,ko01100,ko01110,ko01130,map00250,map00330,map01100,map01110,map01130 - R00245,R00707,R00708,R01253,R04444,R04445,R05051 RC00080,RC00083,RC00216,RC00242,RC00255 ko00000,ko00001,ko01000,ko03000 - - - Aldedh,Pro_dh BECNEDJF_03074 411477.PARMER_01288 1.64e-284 777.0 COG0506@1|root,COG0506@2|Bacteria,4NEH5@976|Bacteroidetes,2FRJ4@200643|Bacteroidia,22VZE@171551|Porphyromonadaceae 976|Bacteroidetes E Proline dehydrogenase - - - ko:K00318 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R10507 RC00083 ko00000,ko00001,ko01000 - - - Pro_dh BECNEDJF_03076 411477.PARMER_01286 3.79e-182 508.0 COG0345@1|root,COG0345@2|Bacteria,4NE6F@976|Bacteroidetes,2FMRG@200643|Bacteroidia,22WAW@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline proC - 1.5.1.2 ko:K00286 ko00330,ko01100,ko01110,ko01130,ko01230,map00330,map01100,map01110,map01130,map01230 M00015 R01248,R01251,R03291,R03293 RC00054,RC00083 ko00000,ko00001,ko00002,ko01000 - - - F420_oxidored,P5CR_dimer BECNEDJF_03077 411477.PARMER_01285 1.91e-301 821.0 COG3579@1|root,COG3579@2|Bacteria,4NE02@976|Bacteroidetes,2FN7G@200643|Bacteroidia,22W1M@171551|Porphyromonadaceae 976|Bacteroidetes E aminopeptidase pepC - 3.4.22.40 ko:K01372 - - - - ko00000,ko01000,ko01002 - - - Peptidase_C1,Peptidase_C1_2 BECNEDJF_03078 411477.PARMER_01284 8.05e-113 326.0 COG3015@1|root,COG3015@2|Bacteria,4P5SI@976|Bacteroidetes 976|Bacteroidetes MP NlpE N-terminal domain - - - - - - - - - - - - NlpE BECNEDJF_03079 411477.PARMER_01283 0.0 1607.0 COG0823@1|root,COG1506@1|root,COG0823@2|Bacteria,COG1506@2|Bacteria,4NETS@976|Bacteroidetes,2FRBH@200643|Bacteroidia,22ZE0@171551|Porphyromonadaceae 976|Bacteroidetes EU Dipeptidyl peptidase IV (DPP IV) N-terminal region - - 3.4.14.5 ko:K01278 ko04974,map04974 - - - ko00000,ko00001,ko01000,ko01002,ko04090,ko04147 - - - DPPIV_N,Peptidase_S9 BECNEDJF_03081 411477.PARMER_01281 0.0 1536.0 COG3408@1|root,COG3408@2|Bacteria,4PMQ8@976|Bacteroidetes,2FQR0@200643|Bacteroidia,2301J@171551|Porphyromonadaceae 976|Bacteroidetes G Bacterial alpha-L-rhamnosidase C-terminal domain - - - - - - - - - - - - Bac_rhamnosid,Bac_rhamnosid6H,Bac_rhamnosid_C BECNEDJF_03082 411477.PARMER_01280 2.09e-116 333.0 COG0545@1|root,COG0545@2|Bacteria 2|Bacteria O Peptidyl-prolyl cis-trans isomerase - - - - - - - - - - - - FKBP_C BECNEDJF_03083 411477.PARMER_01279 2.38e-273 747.0 COG4992@1|root,COG4992@2|Bacteria,4NE0Z@976|Bacteroidetes,2FNR5@200643|Bacteroidia,22VXR@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family argD - 2.6.1.11,2.6.1.17 ko:K00821 ko00220,ko00300,ko01100,ko01110,ko01120,ko01130,ko01210,ko01230,map00220,map00300,map01100,map01110,map01120,map01130,map01210,map01230 M00016,M00028,M00845 R02283,R04475 RC00006,RC00062 ko00000,ko00001,ko00002,ko01000,ko01007 - - - Aminotran_3 BECNEDJF_03084 411477.PARMER_01277 8.45e-238 653.0 COG0002@1|root,COG0002@2|Bacteria,4NEQR@976|Bacteroidetes,2FMWZ@200643|Bacteroidia,22WTC@171551|Porphyromonadaceae 976|Bacteroidetes E Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde argC - 1.2.1.38 ko:K00145 ko00220,ko01100,ko01110,ko01130,ko01210,ko01230,map00220,map01100,map01110,map01130,map01210,map01230 M00028,M00845 R03443 RC00684 ko00000,ko00001,ko00002,ko01000 - - - Semialdhyde_dh,Semialdhyde_dhC BECNEDJF_03085 411477.PARMER_01276 2.77e-291 795.0 COG0137@1|root,COG0137@2|Bacteria,4NE3R@976|Bacteroidetes,2FMRA@200643|Bacteroidia,22X17@171551|Porphyromonadaceae 976|Bacteroidetes E argininosuccinate synthase argG - 6.3.4.5 ko:K01940 ko00220,ko00250,ko01100,ko01110,ko01130,ko01230,ko05418,map00220,map00250,map01100,map01110,map01130,map01230,map05418 M00029,M00844,M00845 R01954 RC00380,RC00629 ko00000,ko00001,ko00002,ko01000,ko04147 - - - Arginosuc_synth BECNEDJF_03086 411477.PARMER_01275 1.17e-141 399.0 COG1246@1|root,COG1246@2|Bacteria,4NGXY@976|Bacteroidetes,2FN6P@200643|Bacteroidia,22XAD@171551|Porphyromonadaceae 976|Bacteroidetes E Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_1 BECNEDJF_03087 999419.HMPREF1077_00508 4.91e-110 317.0 COG1438@1|root,COG1438@2|Bacteria,4NSSS@976|Bacteroidetes,2FR3Q@200643|Bacteroidia,22YDN@171551|Porphyromonadaceae 976|Bacteroidetes K Regulates arginine biosynthesis genes argR - - ko:K03402 - - - - ko00000,ko03000 - - - Arg_repressor,Arg_repressor_C BECNEDJF_03088 411477.PARMER_01273 5.82e-180 502.0 COG0501@1|root,COG0501@2|Bacteria,4NE0J@976|Bacteroidetes,2FQJ1@200643|Bacteroidia,22VWE@171551|Porphyromonadaceae 976|Bacteroidetes O Peptidase, M48 family - - - - - - - - - - - - Peptidase_M48 BECNEDJF_03089 411477.PARMER_01271 0.0 1188.0 COG0249@1|root,COG0249@2|Bacteria,4NE6X@976|Bacteroidetes,2FM62@200643|Bacteroidia,22W8S@171551|Porphyromonadaceae 976|Bacteroidetes L ATPase domain of DNA mismatch repair MUTS family mutS_2 - - - - - - - - - - - MutS_III,MutS_V BECNEDJF_03090 411477.PARMER_01270 4.74e-210 580.0 COG2829@1|root,COG2829@2|Bacteria,4NIYQ@976|Bacteroidetes,2FR73@200643|Bacteroidia,22WW2@171551|Porphyromonadaceae 976|Bacteroidetes M Phospholipase A1 pldA - 3.1.1.32,3.1.1.4 ko:K01058 ko00564,ko00565,ko00590,ko00591,ko00592,ko01100,ko01110,map00564,map00565,map00590,map00591,map00592,map01100,map01110 - R01315,R01316,R01317,R02053,R02054,R04034,R07064,R07379,R07387,R07859,R07860 RC00020,RC00037,RC00041,RC00094 ko00000,ko00001,ko01000 - - - PLA1 BECNEDJF_03091 411477.PARMER_01269 2.85e-226 625.0 COG0628@1|root,COG0628@2|Bacteria,4NIB3@976|Bacteroidetes,2FPVP@200643|Bacteroidia,22WR3@171551|Porphyromonadaceae 976|Bacteroidetes S AI-2E family transporter - - - - - - - - - - - - AI-2E_transport BECNEDJF_03092 411477.PARMER_01268 3.34e-210 580.0 COG0024@1|root,COG0024@2|Bacteria,4NIMB@976|Bacteroidetes,2FM2H@200643|Bacteroidia,22X18@171551|Porphyromonadaceae 976|Bacteroidetes E Metallopeptidase family M24 map - 3.4.11.18 ko:K01265 - - - - ko00000,ko01000,ko01002 - - - Peptidase_M24 BECNEDJF_03093 411477.PARMER_01267 1.49e-82 245.0 COG1970@1|root,COG1970@2|Bacteria,4NQ49@976|Bacteroidetes,2FT2E@200643|Bacteroidia,22Y4Y@171551|Porphyromonadaceae 976|Bacteroidetes M Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell mscL GO:0003674,GO:0005215,GO:0005575,GO:0006810,GO:0006811,GO:0006884,GO:0008150,GO:0008361,GO:0008381,GO:0009987,GO:0009992,GO:0015267,GO:0016020,GO:0016021,GO:0016043,GO:0019725,GO:0022803,GO:0022836,GO:0022857,GO:0030104,GO:0031224,GO:0032535,GO:0042592,GO:0044425,GO:0048878,GO:0051179,GO:0051234,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0071840,GO:0090066 - ko:K03282 - - - - ko00000,ko02000 1.A.22.1 - - MscL BECNEDJF_03095 585543.HMPREF0969_03463 1.47e-234 665.0 COG0591@1|root,COG3055@1|root,COG0591@2|Bacteria,COG3055@2|Bacteria,4NEN8@976|Bacteroidetes,2FPDT@200643|Bacteroidia,4ANKJ@815|Bacteroidaceae 976|Bacteroidetes E alkaline phosphatase synthesis sensor protein phoR K07636 - - - ko:K03307 - - - - ko00000 2.A.21 - - Kelch_5,SSF BECNEDJF_03096 411477.PARMER_04387 3.28e-103 299.0 2BZE3@1|root,33WNC@2|Bacteria,4P35P@976|Bacteroidetes,2FPVE@200643|Bacteroidia 976|Bacteroidetes S COG NOG28134 non supervised orthologous group - - - - - - - - - - - - - BECNEDJF_03098 411477.PARMER_04390 8.2e-113 324.0 COG0450@1|root,COG0450@2|Bacteria,4NS8B@976|Bacteroidetes,2FPJE@200643|Bacteroidia,22YH1@171551|Porphyromonadaceae 976|Bacteroidetes O Thioredoxin-like - - - - - - - - - - - - AhpC-TSA,Redoxin,Thioredoxin_8 BECNEDJF_03099 411477.PARMER_04392 1.2e-59 184.0 COG0309@1|root,COG0309@2|Bacteria 2|Bacteria O Hydrogenase expression formation protein (HypE) hypE GO:0006464,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0018193,GO:0018198,GO:0018249,GO:0019538,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0046892,GO:0051604,GO:0071704,GO:1901564 - ko:K04655 - - - - ko00000 - - - AIRS,AIRS_C BECNEDJF_03100 411477.PARMER_02026 3.86e-135 387.0 2DMXZ@1|root,32UBB@2|Bacteria,4NTRT@976|Bacteroidetes,2FSCE@200643|Bacteroidia,2319J@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_03101 411477.PARMER_01796 3.58e-43 145.0 COG2209@1|root,COG2209@2|Bacteria,4NEU0@976|Bacteroidetes,2FMW9@200643|Bacteroidia,22WBF@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol nqrE - 1.6.5.8 ko:K00350 - - - - ko00000,ko01000 - - - Rnf-Nqr BECNEDJF_03102 411477.PARMER_01795 0.0 863.0 COG2871@1|root,COG2871@2|Bacteria,4NFKC@976|Bacteroidetes,2FN44@200643|Bacteroidia,22WRI@171551|Porphyromonadaceae 976|Bacteroidetes C NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway nqrF - 1.6.5.8 ko:K00351 - - - - ko00000,ko01000 - - - FAD_binding_6,Fer2,NAD_binding_1 BECNEDJF_03105 411477.PARMER_01792 4.74e-106 305.0 COG0610@1|root,COG0610@2|Bacteria,4PKFE@976|Bacteroidetes,2FPFZ@200643|Bacteroidia,2322A@171551|Porphyromonadaceae 976|Bacteroidetes V Type I restriction enzyme R protein N terminus (HSDR_N) - - - - - - - - - - - - HSDR_N_2 BECNEDJF_03106 411477.PARMER_01791 5.46e-186 516.0 COG2820@1|root,COG2820@2|Bacteria,4NESQ@976|Bacteroidetes,2FP2V@200643|Bacteroidia,22W5E@171551|Porphyromonadaceae 976|Bacteroidetes F Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile amn - 3.2.2.4 ko:K01241 ko00230,map00230 - R00182 RC00063,RC00318 ko00000,ko00001,ko01000 - - - PNP_UDP_1 BECNEDJF_03107 411477.PARMER_01790 5.09e-239 657.0 COG1466@1|root,COG1466@2|Bacteria,4NEIB@976|Bacteroidetes,2FNY6@200643|Bacteroidia,22W6C@171551|Porphyromonadaceae 976|Bacteroidetes L DNA polymerase III holA - 2.7.7.7 ko:K02340 ko00230,ko00240,ko01100,ko03030,ko03430,ko03440,map00230,map00240,map01100,map03030,map03430,map03440 M00260 R00375,R00376,R00377,R00378 RC02795 ko00000,ko00001,ko00002,ko01000,ko03032,ko03400 - - - DNA_pol3_delta BECNEDJF_03108 411477.PARMER_01789 4.05e-98 285.0 COG3093@1|root,COG3093@2|Bacteria,4NSDG@976|Bacteroidetes,2FSS7@200643|Bacteroidia,22YQ7@171551|Porphyromonadaceae 976|Bacteroidetes K Helix-turn-helix XRE-family like proteins - - - - - - - - - - - - HTH_3,Phage_CI_repr BECNEDJF_03109 411477.PARMER_01788 2.72e-191 530.0 COG0543@1|root,COG0543@2|Bacteria,4NE35@976|Bacteroidetes,2FN69@200643|Bacteroidia,22WHB@171551|Porphyromonadaceae 976|Bacteroidetes C Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD( pyrK - - ko:K02823 ko00240,ko01100,map00240,map01100 - - - ko00000,ko00001 - - - DHODB_Fe-S_bind,FAD_binding_6,NAD_binding_1 BECNEDJF_03110 411477.PARMER_01787 8.92e-219 603.0 COG0167@1|root,COG0167@2|Bacteria,4NDVB@976|Bacteroidetes,2FPMW@200643|Bacteroidia,22XED@171551|Porphyromonadaceae 976|Bacteroidetes F Belongs to the dihydroorotate dehydrogenase family. Type 1 subfamily pyrD GO:0003674,GO:0003824,GO:0004152,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006206,GO:0006207,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009112,GO:0009987,GO:0016491,GO:0016627,GO:0016635,GO:0018130,GO:0019856,GO:0034641,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046112,GO:0046483,GO:0055086,GO:0055114,GO:0071704,GO:0072527,GO:0072528,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576 1.3.1.14,1.3.98.1 ko:K00226,ko:K17828 ko00240,ko01100,map00240,map01100 M00051 R01867,R01869 RC00051 ko00000,ko00001,ko00002,ko01000 - - - DHO_dh BECNEDJF_03111 411477.PARMER_01786 0.0 1469.0 COG3345@1|root,COG3345@2|Bacteria,4NHAT@976|Bacteroidetes,2FM30@200643|Bacteroidia,22WS0@171551|Porphyromonadaceae 976|Bacteroidetes G Glycosyl hydrolase family 36 C-terminal domain - - 3.2.1.22 ko:K07407 ko00052,ko00561,ko00600,ko00603,map00052,map00561,map00600,map00603 - R01101,R01103,R01104,R01194,R01329,R02926,R03634,R04019,R04470,R05549,R05961,R06091 RC00049,RC00059,RC00451 ko00000,ko00001,ko01000 - - - Glyco_hydro_36C,Glyco_hydro_36N,Melibiase BECNEDJF_03112 411477.PARMER_01785 1.13e-157 443.0 COG1285@1|root,COG1285@2|Bacteria,4NRHK@976|Bacteroidetes,2G370@200643|Bacteroidia,22Y5I@171551|Porphyromonadaceae 976|Bacteroidetes S MgtC family - - - ko:K07507 - - - - ko00000,ko02000 9.B.20 - - MgtC BECNEDJF_03113 411477.PARMER_01784 1.14e-110 318.0 COG1433@1|root,COG1433@2|Bacteria,4NRPC@976|Bacteroidetes,2FPSP@200643|Bacteroidia,22Y9G@171551|Porphyromonadaceae 976|Bacteroidetes S Putative redox-active protein (C_GCAxxG_C_C) - - - - - - - - - - - - C_GCAxxG_C_C BECNEDJF_03114 411477.PARMER_01783 5.47e-66 200.0 2E3DE@1|root,32YCK@2|Bacteria,4NVFG@976|Bacteroidetes,2FT26@200643|Bacteroidia,22YQ5@171551|Porphyromonadaceae 976|Bacteroidetes S Stress responsive - - - - - - - - - - - - Dabb BECNEDJF_03115 411477.PARMER_01782 1.82e-35 130.0 COG0560@1|root,COG3830@1|root,COG0560@2|Bacteria,COG3830@2|Bacteria,4NHAG@976|Bacteroidetes,2FNI5@200643|Bacteroidia,22XCU@171551|Porphyromonadaceae 976|Bacteroidetes ET phosphoserine phosphatase serB - 3.1.3.3 ko:K01079 ko00260,ko00680,ko01100,ko01120,ko01130,ko01200,ko01230,map00260,map00680,map01100,map01120,map01130,map01200,map01230 M00020 R00582 RC00017 ko00000,ko00001,ko00002,ko01000,ko01009 - - - ACT_6,Glycos_transf_2,HAD BECNEDJF_03116 411477.PARMER_02001 0.0 1135.0 COG1785@1|root,COG1785@2|Bacteria,4NG3D@976|Bacteroidetes,2FQUC@200643|Bacteroidia,22WG5@171551|Porphyromonadaceae 976|Bacteroidetes P Belongs to the alkaline phosphatase family - - 3.1.3.1 ko:K01077 ko00730,ko00790,ko01100,ko02020,map00730,map00790,map01100,map02020 M00126 R02135,R04620 RC00017 ko00000,ko00001,ko00002,ko00537,ko01000,ko04147 - - - Alk_phosphatase BECNEDJF_03117 411477.PARMER_00594 0.0 1085.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia 976|Bacteroidetes P TonB-linked outer membrane protein, SusC RagA family - - - - - - - - - - - - CarbopepD_reg_2,Plug,TonB_dep_Rec BECNEDJF_03118 411477.PARMER_00595 0.0 1263.0 COG0561@1|root,COG0561@2|Bacteria,4PMUN@976|Bacteroidetes,2G0GT@200643|Bacteroidia 976|Bacteroidetes S Pfam:SusD - - - - - - - - - - - - SusD-like_3,SusD_RagB BECNEDJF_03119 411477.PARMER_00596 0.0 1098.0 28KYZ@1|root,347JM@2|Bacteria,4P5QT@976|Bacteroidetes,2FUBY@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_03120 411477.PARMER_00597 0.0 972.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 BECNEDJF_03121 411477.PARMER_00598 0.0 981.0 COG5434@1|root,COG5434@2|Bacteria,4NFSC@976|Bacteroidetes,2FNQN@200643|Bacteroidia,22Y8F@171551|Porphyromonadaceae 976|Bacteroidetes G Pectate lyase superfamily protein - - - - - - - - - - - - Glyco_hydro_28,Pectate_lyase_3 BECNEDJF_03122 411477.PARMER_00599 3.97e-175 488.0 COG5434@1|root,COG5434@2|Bacteria,4NQX5@976|Bacteroidetes,2FXWX@200643|Bacteroidia 976|Bacteroidetes G Pectate lyase superfamily protein - - - - - - - - - - - - Glyco_hydro_28 BECNEDJF_03125 411477.PARMER_01673 9.99e-255 701.0 COG3710@1|root,COG3710@2|Bacteria,4P6VC@976|Bacteroidetes 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - Trans_reg_C BECNEDJF_03126 411477.PARMER_00176 8.49e-113 328.0 COG1108@1|root,COG1108@2|Bacteria,4NH3D@976|Bacteroidetes,2FNK0@200643|Bacteroidia,22W1V@171551|Porphyromonadaceae 976|Bacteroidetes P ABC 3 transport family protein znuB - - ko:K02075,ko:K09816 ko02010,map02010 M00242,M00244 - - ko00000,ko00001,ko00002,ko02000 3.A.1.15,3.A.1.15.3,3.A.1.15.5 - - ABC-3 BECNEDJF_03130 411477.PARMER_01708 1.98e-302 823.0 COG4992@1|root,COG4992@2|Bacteria,4NE93@976|Bacteroidetes,2FMPQ@200643|Bacteroidia,22WQY@171551|Porphyromonadaceae 976|Bacteroidetes E Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family rocD - 2.6.1.13 ko:K00819 ko00330,ko01100,ko01110,ko01130,map00330,map01100,map01110,map01130 - R00667 RC00006,RC00062 ko00000,ko00001,ko01000,ko01007 - - - Aminotran_3 BECNEDJF_03132 411477.PARMER_04188 3.49e-213 598.0 COG1288@1|root,COG1288@2|Bacteria,4NEUI@976|Bacteroidetes,2FQKK@200643|Bacteroidia,22WMH@171551|Porphyromonadaceae 976|Bacteroidetes S AbgT putative transporter family - - - - - - - - - - - - DcuC BECNEDJF_03133 411477.PARMER_04189 1.92e-262 719.0 COG0389@1|root,COG0389@2|Bacteria,4NF1Y@976|Bacteroidetes,2FNAN@200643|Bacteroidia,22VUU@171551|Porphyromonadaceae 976|Bacteroidetes L Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII dinB - 2.7.7.7 ko:K02346 - - - - ko00000,ko01000,ko03400 - - - IMS,IMS_C,IMS_HHH BECNEDJF_03134 411477.PARMER_04190 0.0 1241.0 COG1166@1|root,COG1166@2|Bacteria,4PKX0@976|Bacteroidetes,2FMN2@200643|Bacteroidia,22W3A@171551|Porphyromonadaceae 976|Bacteroidetes H Catalyzes the biosynthesis of agmatine from arginine speA - 4.1.1.19 ko:K01585 ko00330,ko01100,map00330,map01100 M00133 R00566 RC00299 ko00000,ko00001,ko00002,ko01000 - - - Orn_Arg_deC_N BECNEDJF_03136 411477.PARMER_04192 0.0 1578.0 COG4775@1|root,COG4775@2|Bacteria,4NE80@976|Bacteroidetes,2FM1J@200643|Bacteroidia,22WAY@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein, OMP85 family - - - - - - - - - - - - Bac_surface_Ag,POTRA BECNEDJF_03137 411477.PARMER_04193 2.22e-184 512.0 COG0566@1|root,COG0566@2|Bacteria,4NG1U@976|Bacteroidetes,2FNE2@200643|Bacteroidia,22WK6@171551|Porphyromonadaceae 976|Bacteroidetes J RNA methyltransferase aviRb - - ko:K03437 - - - - ko00000,ko03016 - - - SpoU_methylase,SpoU_sub_bind BECNEDJF_03139 411477.PARMER_04194 1.02e-191 532.0 2EK3P@1|root,33DU3@2|Bacteria,4NU68@976|Bacteroidetes,2FMUD@200643|Bacteroidia,22YCH@171551|Porphyromonadaceae 976|Bacteroidetes S Domain of unknown function (DUF4296) - - - - - - - - - - - - DUF4296 BECNEDJF_03140 411477.PARMER_04195 2.25e-123 352.0 COG0597@1|root,COG0597@2|Bacteria,4NEZN@976|Bacteroidetes,2FS30@200643|Bacteroidia,22XTH@171551|Porphyromonadaceae 976|Bacteroidetes MU This protein specifically catalyzes the removal of signal peptides from prolipoproteins lspA - 3.4.23.36 ko:K03101 ko03060,map03060 - - - ko00000,ko00001,ko01000,ko01002 - - - Peptidase_A8 BECNEDJF_03141 411477.PARMER_04196 1.45e-80 239.0 COG1734@1|root,COG1734@2|Bacteria,4NNID@976|Bacteroidetes,2FSI2@200643|Bacteroidia,22XWH@171551|Porphyromonadaceae 976|Bacteroidetes T Molecular chaperone DnaK yocK - - - - - - - - - - - zf-dskA_traR BECNEDJF_03142 411477.PARMER_04197 0.0 1025.0 COG0060@1|root,COG0060@2|Bacteria,4NEYT@976|Bacteroidetes,2FM5R@200643|Bacteroidia,22W3E@171551|Porphyromonadaceae 976|Bacteroidetes J amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile) ileS GO:0003674,GO:0003824,GO:0004812,GO:0004822,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006139,GO:0006399,GO:0006412,GO:0006418,GO:0006428,GO:0006518,GO:0006520,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016874,GO:0016875,GO:0019538,GO:0019752,GO:0034641,GO:0034645,GO:0034660,GO:0043038,GO:0043039,GO:0043043,GO:0043170,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360,GO:1901564,GO:1901566,GO:1901576 6.1.1.5 ko:K01870 ko00970,map00970 M00359,M00360 R03656 RC00055,RC00523 ko00000,ko00001,ko00002,ko01000,ko01007,ko03016 - - - Anticodon_1,tRNA-synt_1 BECNEDJF_03143 411477.PARMER_03403 6.39e-97 288.0 COG0382@1|root,COG0382@2|Bacteria,4NIRK@976|Bacteroidetes,2FMK9@200643|Bacteroidia,2306J@171551|Porphyromonadaceae 976|Bacteroidetes H UbiA prenyltransferase family - - - - - - - - - - - - UbiA BECNEDJF_03144 411477.PARMER_03404 4.39e-139 393.0 COG0560@1|root,COG0560@2|Bacteria,4NRRM@976|Bacteroidetes,2FTYR@200643|Bacteroidia,231E0@171551|Porphyromonadaceae 976|Bacteroidetes E haloacid dehalogenase-like hydrolase - - - - - - - - - - - - GtrA,HAD BECNEDJF_03145 411477.PARMER_03405 7.27e-303 826.0 2DPNF@1|root,332RX@2|Bacteria,4NWH8@976|Bacteroidetes,2FXPC@200643|Bacteroidia,2308N@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - BECNEDJF_03146 411477.PARMER_03406 0.0 2223.0 COG1572@1|root,COG1572@2|Bacteria,4NDY7@976|Bacteroidetes,2FMIV@200643|Bacteroidia,22WVT@171551|Porphyromonadaceae 976|Bacteroidetes S Peptidase family C25 porU - - - - - - - - - - - Peptidase_C25 BECNEDJF_03147 411477.PARMER_03407 7.14e-142 400.0 COG0179@1|root,COG0179@2|Bacteria,4NGCT@976|Bacteroidetes,2FPPX@200643|Bacteroidia,22W4P@171551|Porphyromonadaceae 976|Bacteroidetes Q 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase fahA - - - - - - - - - - - FAA_hydrolase BECNEDJF_03148 411477.PARMER_03408 1.51e-153 431.0 COG2344@1|root,COG2344@2|Bacteria,4NIIF@976|Bacteroidetes,2FKZF@200643|Bacteroidia,22WX5@171551|Porphyromonadaceae 976|Bacteroidetes K Modulates transcription in response to changes in cellular NADH NAD( ) redox state rex - - ko:K01926 - - - - ko00000,ko03000 - - - CoA_binding,Put_DNA-bind_N BECNEDJF_03151 1235803.C825_01465 0.0 975.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_03153 411477.PARMER_00073 7.79e-170 476.0 COG0524@1|root,COG0524@2|Bacteria,4NGFK@976|Bacteroidetes,2FN72@200643|Bacteroidia,22WT2@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family - - 2.7.1.4 ko:K00847 ko00051,ko00500,ko00520,ko01100,map00051,map00500,map00520,map01100 - R00760,R00867,R03920 RC00002,RC00017 ko00000,ko00001,ko01000 - - - PfkB BECNEDJF_03154 411477.PARMER_03013 2.37e-97 308.0 COG1629@1|root,COG4771@2|Bacteria,4P1Z5@976|Bacteroidetes,2FWS8@200643|Bacteroidia,2300Y@171551|Porphyromonadaceae 976|Bacteroidetes P TonB dependent receptor - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_03155 411477.PARMER_00635 4.51e-134 380.0 COG0477@1|root,COG2814@2|Bacteria,4NG6X@976|Bacteroidetes,2FMDN@200643|Bacteroidia,22WNZ@171551|Porphyromonadaceae 976|Bacteroidetes EGP Sugar (and other) transporter bcr - - ko:K03446,ko:K07552 - M00701 - - ko00000,ko00002,ko02000 2.A.1.2,2.A.1.3 - - MFS_1 BECNEDJF_03158 411477.PARMER_00632 2.39e-228 629.0 COG1186@1|root,COG1186@2|Bacteria,4NEN1@976|Bacteroidetes,2FMZK@200643|Bacteroidia,22WHJ@171551|Porphyromonadaceae 976|Bacteroidetes J Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA prfB - - ko:K02836 - - - - ko00000,ko03012 - - - PCRF,RF-1 BECNEDJF_03159 411477.PARMER_00631 0.0 1220.0 COG1022@1|root,COG1022@2|Bacteria,4NEA4@976|Bacteroidetes,2FNK9@200643|Bacteroidia,22WFS@171551|Porphyromonadaceae 976|Bacteroidetes I Long-chain fatty acid--CoA ligase fadD - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding BECNEDJF_03160 411477.PARMER_00630 1.34e-72 218.0 COG1695@1|root,COG1695@2|Bacteria,4NSI4@976|Bacteroidetes,2FTF6@200643|Bacteroidia,22Y5S@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - ko:K10947 - - - - ko00000,ko03000 - - - PadR BECNEDJF_03161 411477.PARMER_00629 7.28e-246 677.0 COG1983@1|root,COG1983@2|Bacteria,4NG3T@976|Bacteroidetes,2FPZX@200643|Bacteroidia,22XZS@171551|Porphyromonadaceae 976|Bacteroidetes KT PspC domain - - - ko:K03973 - - - - ko00000,ko02048,ko03000 - - - DUF2807,PspC BECNEDJF_03162 411477.PARMER_00628 5.61e-142 405.0 COG3595@1|root,COG3595@2|Bacteria 2|Bacteria - - - - - - - - - - - - - - DUF2807,DUF4097 BECNEDJF_03164 411477.PARMER_00627 3e-89 261.0 COG0537@1|root,COG0537@2|Bacteria,4NQ4X@976|Bacteroidetes,2FSRY@200643|Bacteroidia,22Y7E@171551|Porphyromonadaceae 976|Bacteroidetes FG HIT family hydrolase hinT - - ko:K02503 - - - - ko00000,ko04147 - - - HIT BECNEDJF_03165 411477.PARMER_00626 3.53e-100 291.0 COG0782@1|root,COG0782@2|Bacteria,4NNH6@976|Bacteroidetes,2FPFU@200643|Bacteroidia,22XVA@171551|Porphyromonadaceae 976|Bacteroidetes K Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides greA - - ko:K03624 - - - - ko00000,ko03021 - - - GreA_GreB,GreA_GreB_N BECNEDJF_03166 999419.HMPREF1077_01359 4.05e-266 730.0 COG0526@1|root,COG0526@2|Bacteria,4P37Z@976|Bacteroidetes,2G3DY@200643|Bacteroidia,22WDB@171551|Porphyromonadaceae 976|Bacteroidetes CO Domain of unknown function (DUF4369) - - - - - - - - - - - - AhpC-TSA,DUF4369,Thioredoxin_8 BECNEDJF_03167 999419.HMPREF1077_01360 0.0 1393.0 COG1185@1|root,COG1185@2|Bacteria,4NE4Q@976|Bacteroidetes,2FN5H@200643|Bacteroidia,22W1K@171551|Porphyromonadaceae 976|Bacteroidetes J Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction pnp - 2.7.7.8 ko:K00962 ko00230,ko00240,ko03018,map00230,map00240,map03018 M00394 R00437,R00438,R00439,R00440 RC02795 ko00000,ko00001,ko00002,ko01000,ko03016,ko03019 - - - KH_1,PNPase,RNase_PH,RNase_PH_C,S1 BECNEDJF_03168 411477.PARMER_04143 7.87e-104 318.0 COG3533@1|root,COG3533@2|Bacteria,4NG7T@976|Bacteroidetes,2FPXE@200643|Bacteroidia,22WKF@171551|Porphyromonadaceae 976|Bacteroidetes S Beta-L-arabinofuranosidase, GH127 - - - - - - - - - - - - Glyco_hydro_127 BECNEDJF_03171 1235813.JCM10003_332 5.71e-14 69.7 2BBUC@1|root,325CN@2|Bacteria,4NQVH@976|Bacteroidetes,2FMJQ@200643|Bacteroidia,4ANX6@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_03172 763034.HMPREF9446_00349 1.43e-128 370.0 2BBUC@1|root,325CN@2|Bacteria,4NQVH@976|Bacteroidetes,2FMJQ@200643|Bacteroidia,4ANX6@815|Bacteroidaceae 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_03173 411477.PARMER_01034 6.21e-243 665.0 COG2348@1|root,COG2348@2|Bacteria,4NQ1R@976|Bacteroidetes,2FTKE@200643|Bacteroidia,22Y8E@171551|Porphyromonadaceae 976|Bacteroidetes V Acetyltransferase (GNAT) domain - - - - - - - - - - - - Acetyltransf_6 BECNEDJF_03174 411477.PARMER_01033 1.02e-149 421.0 COG2120@1|root,COG2120@2|Bacteria,4NN16@976|Bacteroidetes,2FW3I@200643|Bacteroidia,22Z1Z@171551|Porphyromonadaceae 976|Bacteroidetes S GlcNAc-PI de-N-acetylase - - - - - - - - - - - - PIG-L BECNEDJF_03175 411477.PARMER_01032 0.0 898.0 COG0726@1|root,COG0726@2|Bacteria,4NF79@976|Bacteroidetes,2FR2H@200643|Bacteroidia,22X5H@171551|Porphyromonadaceae 976|Bacteroidetes G polysaccharide deacetylase - - - - - - - - - - - - - BECNEDJF_03176 411477.PARMER_01031 1.46e-300 819.0 COG0438@1|root,COG0438@2|Bacteria,4PKGJ@976|Bacteroidetes,2FRNG@200643|Bacteroidia,22XF2@171551|Porphyromonadaceae 976|Bacteroidetes M Glycosyltransferase Family 4 - - - - - - - - - - - - Glyco_trans_1_4,Glyco_trans_4_4,Glyco_transf_4 BECNEDJF_03177 411477.PARMER_01030 6.35e-281 766.0 COG0438@1|root,COG0438@2|Bacteria,4NFMB@976|Bacteroidetes,2FMJE@200643|Bacteroidia,22XBH@171551|Porphyromonadaceae 976|Bacteroidetes M transferase activity, transferring glycosyl groups - - - - - - - - - - - - Glyco_trans_1_4 BECNEDJF_03178 411477.PARMER_01029 3.89e-242 664.0 COG2264@1|root,COG2264@2|Bacteria 2|Bacteria J protein methyltransferase activity prmA - 2.1.1.222,2.1.1.64 ko:K00568,ko:K02687 ko00130,ko01100,ko01110,map00130,map01100,map01110 M00117 R04988,R05614,R08769,R08781 RC00003,RC00392,RC01895 ko00000,ko00001,ko00002,ko01000,ko03009 - - - Methyltransf_12,Methyltransf_21,Methyltransf_23,Methyltransf_25,Methyltransf_31,PrmA BECNEDJF_03179 411477.PARMER_01028 1.11e-84 249.0 COG0801@1|root,COG0801@2|Bacteria,4NWDI@976|Bacteroidetes,2FUPY@200643|Bacteroidia 976|Bacteroidetes H 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase folK2 - 2.7.6.3 ko:K00950 ko00790,ko01100,map00790,map01100 M00126,M00841 R03503 RC00002,RC00017 ko00000,ko00001,ko00002,ko01000 - - - C_GCAxxG_C_C,HPPK BECNEDJF_03180 411477.PARMER_01027 0.0 1624.0 COG0370@1|root,COG0370@2|Bacteria,4NEII@976|Bacteroidetes,2FNKT@200643|Bacteroidia,22VWF@171551|Porphyromonadaceae 976|Bacteroidetes P transporter of a GTP-driven Fe(2 ) uptake system feoB - - ko:K04759 - - - - ko00000,ko02000 9.A.8.1 - - FeoA,FeoB_C,FeoB_N,Gate BECNEDJF_03182 411477.PARMER_01025 7.05e-248 679.0 COG1477@1|root,COG1477@2|Bacteria,4NGEK@976|Bacteroidetes,2FKZQ@200643|Bacteroidia,22W78@171551|Porphyromonadaceae 976|Bacteroidetes H Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein apbE - 2.7.1.180 ko:K03734 - - - - ko00000,ko01000 - - - ApbE BECNEDJF_03184 411477.PARMER_01023 3.63e-57 195.0 COG1501@1|root,COG1501@2|Bacteria,4NE1H@976|Bacteroidetes,2FQU9@200643|Bacteroidia,22W8U@171551|Porphyromonadaceae 976|Bacteroidetes G Domain of unknown function (DUF5110) - - 3.2.1.177,3.2.1.20 ko:K01187,ko:K01811 ko00052,ko00500,ko01100,map00052,map00500,map01100 - R00028,R00801,R00802,R06087,R06088 RC00028,RC00049,RC00077 ko00000,ko00001,ko01000 - GH31 - DUF4968,DUF5110,Gal_mutarotas_2,Glyco_hydro_31 BECNEDJF_03185 411477.PARMER_03490 0.0 1304.0 COG1131@1|root,COG1131@2|Bacteria,4NHPD@976|Bacteroidetes,2FRF1@200643|Bacteroidia 976|Bacteroidetes V ABC-2 type transporter - - - - - - - - - - - - ABC2_membrane,ABC_tran,TerB BECNEDJF_03187 411477.PARMER_03492 2.21e-275 753.0 COG2208@1|root,COG4753@1|root,COG2208@2|Bacteria,COG4753@2|Bacteria,4PM3Q@976|Bacteroidetes,2G2UW@200643|Bacteroidia,231YN@171551|Porphyromonadaceae 976|Bacteroidetes T Sigma factor PP2C-like phosphatases - - 3.1.3.3 ko:K07315 - - - - ko00000,ko01000,ko03021 - - - Response_reg,SpoIIE BECNEDJF_03188 411477.PARMER_03493 1.71e-178 499.0 COG4191@1|root,COG4191@2|Bacteria,4NEJX@976|Bacteroidetes,2FMR7@200643|Bacteroidia 976|Bacteroidetes T GHKL domain - - - - - - - - - - - - HATPase_c,HisKA BECNEDJF_03189 411477.PARMER_03494 6.86e-256 703.0 COG4191@1|root,COG4191@2|Bacteria,4NMC6@976|Bacteroidetes,2FQ5I@200643|Bacteroidia 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,Y_Y_Y BECNEDJF_03190 411477.PARMER_03495 3.2e-91 267.0 COG2172@1|root,COG2172@2|Bacteria,4NV3J@976|Bacteroidetes,2FUZU@200643|Bacteroidia 976|Bacteroidetes T Histidine kinase-like ATPase domain - - 2.7.11.1 ko:K04757 - - - - ko00000,ko01000,ko01001,ko03021 - - - HATPase_c_2 BECNEDJF_03191 411477.PARMER_03496 2.73e-61 188.0 COG1366@1|root,COG1366@2|Bacteria,4NZQX@976|Bacteroidetes 976|Bacteroidetes T STAS domain - - - - - - - - - - - - STAS BECNEDJF_03192 411477.PARMER_03497 0.0 921.0 COG0673@1|root,COG0673@2|Bacteria,4NGGS@976|Bacteroidetes,2FTQH@200643|Bacteroidia 976|Bacteroidetes S Oxidoreductase family, NAD-binding Rossmann fold - - - - - - - - - - - - GFO_IDH_MocA BECNEDJF_03193 411477.PARMER_03498 5.16e-271 741.0 28J57@1|root,2Z913@2|Bacteria,4NF9F@976|Bacteroidetes,2FP11@200643|Bacteroidia,22XM4@171551|Porphyromonadaceae 976|Bacteroidetes S Putative carbohydrate metabolism domain - - - - - - - - - - - - DUF5018,PCMD BECNEDJF_03194 411477.PARMER_03499 4.89e-195 540.0 28U74@1|root,2ZGCS@2|Bacteria,4NN6U@976|Bacteroidetes,2FN7W@200643|Bacteroidia,22XT4@171551|Porphyromonadaceae 976|Bacteroidetes S Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl_2 BECNEDJF_03196 411477.PARMER_00106 9.7e-212 588.0 COG0758@1|root,COG0758@2|Bacteria,4NF7T@976|Bacteroidetes,2FKYE@200643|Bacteroidia,22WZ4@171551|Porphyromonadaceae 976|Bacteroidetes LU DNA protecting protein DprA dprA - - ko:K04096 - - - - ko00000 - - - DNA_processg_A,HHH_5 BECNEDJF_03197 411477.PARMER_00105 4.87e-214 590.0 COG0584@1|root,COG0584@2|Bacteria,4NE2E@976|Bacteroidetes,2FPII@200643|Bacteroidia,231I3@171551|Porphyromonadaceae 976|Bacteroidetes C Glycerophosphoryl diester phosphodiesterase family - - 3.1.4.46 ko:K01126 ko00564,map00564 - R01030,R01470 RC00017,RC00425 ko00000,ko00001,ko01000 - - - DUF4996,GDPD BECNEDJF_03198 411477.PARMER_00104 1.13e-81 241.0 COG3682@1|root,COG3682@2|Bacteria,4NT4V@976|Bacteroidetes,2FSGP@200643|Bacteroidia,22Y4H@171551|Porphyromonadaceae 976|Bacteroidetes K Transcriptional regulator - - - - - - - - - - - - Penicillinase_R BECNEDJF_03199 411477.PARMER_00103 0.0 1119.0 COG0810@1|root,COG4219@1|root,COG0810@2|Bacteria,COG4219@2|Bacteria,4NDWS@976|Bacteroidetes,2FNCU@200643|Bacteroidia,22X60@171551|Porphyromonadaceae 976|Bacteroidetes KMT Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins - - - - - - - - - - - - CarbopepD_reg_2,Peptidase_M56,Plug,TonB_C BECNEDJF_03200 999419.HMPREF1077_01817 0.0 885.0 COG0457@1|root,COG0457@2|Bacteria,4NVW0@976|Bacteroidetes,2FNSS@200643|Bacteroidia,22YH2@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeats - - - - - - - - - - - - TPR_16,TPR_19,TPR_6,TPR_8 BECNEDJF_03201 411477.PARMER_00101 4.66e-300 817.0 COG3391@1|root,COG3391@2|Bacteria,4P4QQ@976|Bacteroidetes,2FVGV@200643|Bacteroidia 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 BECNEDJF_03202 411477.PARMER_00100 4.58e-136 385.0 2928B@1|root,2ZPSY@2|Bacteria,4P6WQ@976|Bacteroidetes,2FVMP@200643|Bacteroidia 976|Bacteroidetes - - - - - - - - - - - - - - - BECNEDJF_03203 411477.PARMER_00099 0.0 1459.0 COG0729@1|root,COG1752@1|root,COG0729@2|Bacteria,COG1752@2|Bacteria,4NDXY@976|Bacteroidetes,2FNEV@200643|Bacteroidia,22WBN@171551|Porphyromonadaceae 976|Bacteroidetes M esterase of the alpha-beta hydrolase superfamily - - - ko:K07001 - - - - ko00000 - - - POTRA,Patatin BECNEDJF_03204 411477.PARMER_00098 3.72e-167 466.0 COG5587@1|root,COG5587@2|Bacteria,4NNS3@976|Bacteroidetes,2FPZZ@200643|Bacteroidia,22XWU@171551|Porphyromonadaceae 976|Bacteroidetes S Conserved hypothetical protein (DUF2461) - - - - - - - - - - - - DUF2461 BECNEDJF_03206 411477.PARMER_03364 2.78e-292 799.0 COG0472@1|root,COG0472@2|Bacteria,4NE0T@976|Bacteroidetes,2FMC3@200643|Bacteroidia,22WEF@171551|Porphyromonadaceae 976|Bacteroidetes M First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan mraY - 2.7.8.13 ko:K01000 ko00550,ko01100,ko01502,map00550,map01100,map01502 - R05629,R05630 RC00002,RC02753 ko00000,ko00001,ko01000,ko01011 9.B.146 - - Glycos_transf_4,MraY_sig1 BECNEDJF_03207 411477.PARMER_03365 0.0 957.0 COG0769@1|root,COG0769@2|Bacteria,4NE9W@976|Bacteroidetes,2FM8E@200643|Bacteroidia,22W0E@171551|Porphyromonadaceae 976|Bacteroidetes M Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan murE - 6.3.2.13 ko:K01928 ko00300,ko00550,map00300,map00550 - R02788 RC00064,RC00090 ko00000,ko00001,ko01000,ko01011 - - - Mur_ligase,Mur_ligase_C,Mur_ligase_M BECNEDJF_03208 411477.PARMER_03366 0.0 1451.0 COG0768@1|root,COG2815@1|root,COG0768@2|Bacteria,COG2815@2|Bacteria,4NERV@976|Bacteroidetes,2FM0U@200643|Bacteroidia,22WNY@171551|Porphyromonadaceae 976|Bacteroidetes M Penicillin-binding protein, transpeptidase domain protein ftsI - 3.4.16.4 ko:K03587 ko00550,ko01501,map00550,map01501 - - - ko00000,ko00001,ko01000,ko01011,ko03036 - - - PASTA,PBP_dimer,Transpeptidase BECNEDJF_03209 999419.HMPREF1077_01963 8.39e-68 206.0 2E4WB@1|root,32ZQF@2|Bacteria,4NUMY@976|Bacteroidetes,2FSKJ@200643|Bacteroidia,22YNN@171551|Porphyromonadaceae 976|Bacteroidetes S Psort location Cytoplasmic, score 8.96 - - - - - - - - - - - - - BECNEDJF_03210 411477.PARMER_03368 6.52e-219 604.0 COG0275@1|root,COG0275@2|Bacteria,4NFQB@976|Bacteroidetes,2FMPT@200643|Bacteroidia,22W13@171551|Porphyromonadaceae 976|Bacteroidetes J Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA rsmH GO:0000154,GO:0001510,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008173,GO:0008649,GO:0008757,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0016434,GO:0016740,GO:0016741,GO:0022613,GO:0031167,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043412,GO:0043414,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044424,GO:0044464,GO:0046483,GO:0070475,GO:0071424,GO:0071704,GO:0071840,GO:0090304,GO:0140098,GO:0140102,GO:1901360 2.1.1.199 ko:K03438 - - - - ko00000,ko01000,ko03009 - - - Methyltransf_5 BECNEDJF_03211 411477.PARMER_03370 0.0 2141.0 2DUTV@1|root,33S7W@2|Bacteria,4P1VI@976|Bacteroidetes,2FWJJ@200643|Bacteroidia,22ZT0@171551|Porphyromonadaceae 411477.PARMER_03370|- - - - - - - - - - - - - - - - BECNEDJF_03213 999419.HMPREF1077_00112 6.3e-19 80.1 2DCRY@1|root,2ZF47@2|Bacteria,4P972@976|Bacteroidetes 976|Bacteroidetes S NVEALA protein - - - - - - - - - - - - NVEALA BECNEDJF_03214 999419.HMPREF1077_00220 1.07e-107 312.0 COG1595@1|root,COG1595@2|Bacteria,4NVCP@976|Bacteroidetes,2FTBY@200643|Bacteroidia,22YK6@171551|Porphyromonadaceae 976|Bacteroidetes K Sigma-70, region 4 - - - - - - - - - - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_03215 999419.HMPREF1077_00219 3.42e-278 762.0 COG3712@1|root,COG3712@2|Bacteria,4NJBJ@976|Bacteroidetes,2FQUN@200643|Bacteroidia,22YHT@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_03216 411477.PARMER_00032 1.45e-280 766.0 COG3391@1|root,COG3391@2|Bacteria,4P02P@976|Bacteroidetes,2FNKC@200643|Bacteroidia,2303Q@171551|Porphyromonadaceae 976|Bacteroidetes S 6-bladed beta-propeller - - - - - - - - - - - - DUF5128 BECNEDJF_03217 411477.PARMER_04105 6.66e-312 855.0 COG0457@1|root,COG0457@2|Bacteria,4NRRJ@976|Bacteroidetes,2FNWU@200643|Bacteroidia,231DJ@171551|Porphyromonadaceae 976|Bacteroidetes S Tetratricopeptide repeat - - - - - - - - - - - - TPR_12,TPR_8 BECNEDJF_03218 411477.PARMER_00042 6.95e-188 527.0 COG3274@1|root,COG3274@2|Bacteria,4NP3U@976|Bacteroidetes,2FN6D@200643|Bacteroidia,22XW5@171551|Porphyromonadaceae 976|Bacteroidetes S Acyltransferase family - - - - - - - - - - - - Acyl_transf_3 BECNEDJF_03220 999419.HMPREF1077_01894 0.0 2150.0 COG0642@1|root,COG2205@2|Bacteria,4NKBC@976|Bacteroidetes,2FNE0@200643|Bacteroidia,22WMG@171551|Porphyromonadaceae 976|Bacteroidetes T Histidine kinase-like ATPases - - - - - - - - - - - - HATPase_c,HisKA,PAS_3,PAS_4 BECNEDJF_03221 411477.PARMER_01091 2.45e-287 785.0 COG0738@1|root,COG0738@2|Bacteria,4NEYR@976|Bacteroidetes,2FP5F@200643|Bacteroidia,22W0X@171551|Porphyromonadaceae 976|Bacteroidetes G Major Facilitator Superfamily fucP - - ko:K02429 - - - - ko00000,ko02000 2.A.1.7 - - MFS_1 BECNEDJF_03222 411477.PARMER_01090 9.65e-218 600.0 COG0524@1|root,COG0524@2|Bacteria,4NFJ9@976|Bacteroidetes,2FM38@200643|Bacteroidia,22WX0@171551|Porphyromonadaceae 976|Bacteroidetes G pfkB family carbohydrate kinase - - - - - - - - - - - - PfkB BECNEDJF_03223 411477.PARMER_01089 5.75e-122 349.0 COG1595@1|root,COG1595@2|Bacteria,4NQ0Z@976|Bacteroidetes,2FSHB@200643|Bacteroidia,22YU2@171551|Porphyromonadaceae 976|Bacteroidetes K RNA polymerase sigma-70 factor - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_03224 411477.PARMER_01088 5.94e-225 621.0 COG3712@1|root,COG3712@2|Bacteria,4NKNV@976|Bacteroidetes,2FQUH@200643|Bacteroidia 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_03227 411479.BACUNI_03708 4.3e-133 377.0 COG1595@1|root,COG1595@2|Bacteria,4NS12@976|Bacteroidetes,2FQ76@200643|Bacteroidia,4AQ6I@815|Bacteroidaceae 976|Bacteroidetes K RNA polymerase - - - ko:K03088 - - - - ko00000,ko03021 - - - Sigma70_r2,Sigma70_r4_2 BECNEDJF_03228 411479.BACUNI_03709 2.37e-88 263.0 COG2755@1|root,COG2755@2|Bacteria,4NHBT@976|Bacteroidetes,2G2NP@200643|Bacteroidia,4AMWH@815|Bacteroidaceae 976|Bacteroidetes E COG2755 Lysophospholipase L1 and related - - - - - - - - - - - - Abhydrolase_3,Lipase_GDSL_2 BECNEDJF_03229 411477.PARMER_03094 4.85e-111 324.0 COG2253@1|root,COG2253@2|Bacteria,4NPQZ@976|Bacteroidetes,2FNRX@200643|Bacteroidia 976|Bacteroidetes S Psort location Cytoplasmic, score - - - - - - - - - - - - AbiEii BECNEDJF_03231 411477.PARMER_01146 9.96e-135 382.0 COG3637@1|root,COG3637@2|Bacteria,4NSVH@976|Bacteroidetes,2FS20@200643|Bacteroidia,22YH7@171551|Porphyromonadaceae 976|Bacteroidetes M Outer membrane protein beta-barrel domain - - - - - - - - - - - - OMP_b-brl,OMP_b-brl_2 BECNEDJF_03232 411477.PARMER_02660 0.0 949.0 COG3119@1|root,COG3119@2|Bacteria,4NEM3@976|Bacteroidetes,2FMG2@200643|Bacteroidia,22WGH@171551|Porphyromonadaceae 976|Bacteroidetes P Sulfatase - - - - - - - - - - - - DUF4976,Sulfatase BECNEDJF_03234 411477.PARMER_01833 0.0 2270.0 COG1197@1|root,COG1197@2|Bacteria,4NEPA@976|Bacteroidetes,2FP1Q@200643|Bacteroidia,22WFM@171551|Porphyromonadaceae 976|Bacteroidetes L Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site mfd - - ko:K03723 ko03420,map03420 - - - ko00000,ko00001,ko01000,ko03400 - - - CarD_CdnL_TRCF,DEAD,Helicase_C,TRCF BECNEDJF_03235 411477.PARMER_01834 0.0 1265.0 COG1022@1|root,COG1022@2|Bacteria,4NEA4@976|Bacteroidetes,2FNK9@200643|Bacteroidia,22XGE@171551|Porphyromonadaceae 976|Bacteroidetes I AMP-binding enzyme - - 6.2.1.3 ko:K01897 ko00061,ko00071,ko01100,ko01212,ko02024,ko03320,ko04146,ko04216,ko04714,ko04920,map00061,map00071,map01100,map01212,map02024,map03320,map04146,map04216,map04714,map04920 M00086 R01280 RC00004,RC00014 ko00000,ko00001,ko00002,ko01000,ko01004,ko04147 4.C.1.1 - - AMP-binding BECNEDJF_03236 411477.PARMER_01835 0.0 969.0 COG0305@1|root,COG0305@2|Bacteria,4NF8P@976|Bacteroidetes,2FNG7@200643|Bacteroidia,22XCZ@171551|Porphyromonadaceae 976|Bacteroidetes L Participates in initiation and elongation during chromosome replication dnaB - 3.6.4.12 ko:K02314 ko03030,ko04112,map03030,map04112 - - - ko00000,ko00001,ko01000,ko03032 - - - DnaB,DnaB_C BECNEDJF_03239 411477.PARMER_01837 0.0 1588.0 COG1629@1|root,COG4771@2|Bacteria,4PKE2@976|Bacteroidetes,2G3DZ@200643|Bacteroidia,22WQS@171551|Porphyromonadaceae 976|Bacteroidetes P Outer membrane protein beta-barrel family - - - - - - - - - - - - CarbopepD_reg_2,CarboxypepD_reg,OMP_b-brl_3 BECNEDJF_03241 411477.PARMER_03385 0.0 2124.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FKYX@200643|Bacteroidia,22W07@171551|Porphyromonadaceae 976|Bacteroidetes P TonB-dependent receptor plug domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_03242 411477.PARMER_03384 0.0 996.0 COG0702@1|root,COG0702@2|Bacteria,4NEDB@976|Bacteroidetes,2FPB4@200643|Bacteroidia,23048@171551|Porphyromonadaceae 976|Bacteroidetes GM SusD family - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_03243 411477.PARMER_03383 0.0 921.0 COG0644@1|root,COG0644@2|Bacteria,4NJ0Z@976|Bacteroidetes,2FMSG@200643|Bacteroidia,22XHB@171551|Porphyromonadaceae 976|Bacteroidetes C FAD dependent oxidoreductase - - - - - - - - - - - - FAD_oxidored BECNEDJF_03244 999419.HMPREF1077_01949 0.0 1822.0 COG3250@1|root,COG3250@2|Bacteria,4NE7H@976|Bacteroidetes,2FNT8@200643|Bacteroidia,22VUE@171551|Porphyromonadaceae 976|Bacteroidetes G COG COG3250 Beta-galactosidase beta-glucuronidase csxA_4 - - - - - - - - - - - Glyco_hydro_2,Glyco_hydro_2_C,Glyco_hydro_2_N BECNEDJF_03245 999419.HMPREF1077_01950 3.9e-304 843.0 COG5337@1|root,COG5337@2|Bacteria,4NEH2@976|Bacteroidetes 976|Bacteroidetes M sodium ion export across plasma membrane - - - - - - - - - - - - CHB_HEX_C_1,CotH,Fn3_assoc,LTD BECNEDJF_03247 411477.PARMER_04131 0.0 934.0 28KYZ@1|root,2ZAEB@2|Bacteria,4NHBZ@976|Bacteroidetes,2FP4X@200643|Bacteroidia 976|Bacteroidetes S Psort location CytoplasmicMembrane, score 10.00 - - - - - - - - - - - - - BECNEDJF_03248 411477.PARMER_04130 0.0 1005.0 COG0823@1|root,COG0823@2|Bacteria,4NGH4@976|Bacteroidetes,2FN8G@200643|Bacteroidia 976|Bacteroidetes U WD40-like Beta Propeller Repeat - - - - - - - - - - - - PD40 BECNEDJF_03249 411477.PARMER_04129 1.31e-229 632.0 COG3712@1|root,COG3712@2|Bacteria,4NN1C@976|Bacteroidetes,2FMQZ@200643|Bacteroidia,22Y05@171551|Porphyromonadaceae 976|Bacteroidetes PT Domain of unknown function (DUF4974) - - - - - - - - - - - - DUF4974,FecR BECNEDJF_03250 411477.PARMER_04128 0.0 2318.0 COG1629@1|root,COG1629@2|Bacteria,4NDXS@976|Bacteroidetes,2FM2D@200643|Bacteroidia,22ZUR@171551|Porphyromonadaceae 976|Bacteroidetes P Carboxypeptidase regulatory-like domain - - - - - - - - - - - - CarbopepD_reg_2,Plug,STN,TonB_dep_Rec BECNEDJF_03251 411477.PARMER_04127 0.0 1258.0 COG1435@1|root,COG1435@2|Bacteria,4NE0S@976|Bacteroidetes,2FMZF@200643|Bacteroidia,2301H@171551|Porphyromonadaceae 976|Bacteroidetes F Pfam:SusD - - - ko:K21572 - - - - ko00000,ko02000 8.A.46.1,8.A.46.3 - - SusD-like_3,SusD_RagB BECNEDJF_03252 411477.PARMER_04126 9.35e-157 440.0 28IVF@1|root,2ZHV4@2|Bacteria,4NMPY@976|Bacteroidetes,2FTMS@200643|Bacteroidia,22ZK1@171551|Porphyromonadaceae 976|Bacteroidetes N Protein of unknown function (DUF3823) - - - - - - - - - - - - DUF3823 BECNEDJF_03253 411477.PARMER_01633 4.62e-163 457.0 COG2186@1|root,COG2186@2|Bacteria,4NEUP@976|Bacteroidetes,2FQHW@200643|Bacteroidia,22ZGU@171551|Porphyromonadaceae 976|Bacteroidetes K FCD - - - - - - - - - - - - FCD,GntR BECNEDJF_03254 411477.PARMER_01054 2.43e-196 543.0 COG3475@1|root,COG3475@2|Bacteria,4NI9P@976|Bacteroidetes,2FR7F@200643|Bacteroidia,22Y5C@171551|Porphyromonadaceae 976|Bacteroidetes M LicD family licD - - ko:K07271 - - - - ko00000,ko01000 - - - LicD BECNEDJF_03255 411477.PARMER_04040 1.64e-311 848.0 2E252@1|root,32XC3@2|Bacteria,4NTX9@976|Bacteroidetes,2FNDW@200643|Bacteroidia,22Z00@171551|Porphyromonadaceae 976|Bacteroidetes S Protein of unknown function (DUF3843) - - - - - - - - - - - - DUF3843 BECNEDJF_03256 411477.PARMER_04041 3.98e-73 228.0 COG0673@1|root,COG0673@2|Bacteria,4NE07@976|Bacteroidetes,2FNUN@200643|Bacteroidia,22X96@171551|Porphyromonadaceae 976|Bacteroidetes S Oxidoreductase NAD-binding domain protein - - - ko:K22230 ko00562,ko01120,map00562,map01120 - R09954 RC00182 ko00000,ko00001,ko01000 - - - GFO_IDH_MocA BECNEDJF_03258 411477.PARMER_03982 5.75e-135 382.0 COG1309@1|root,COG1309@2|Bacteria,4NNNT@976|Bacteroidetes,2FS2Z@200643|Bacteroidia,22XV6@171551|Porphyromonadaceae 976|Bacteroidetes K tetR family qacR - - - - - - - - - - - TetR_C_5,TetR_N BECNEDJF_03259 411477.PARMER_03981 6.36e-229 630.0 COG0332@1|root,COG0332@2|Bacteria,4NEWU@976|Bacteroidetes,2FQS4@200643|Bacteroidia,22X1D@171551|Porphyromonadaceae 976|Bacteroidetes I 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal - - 2.3.1.180 ko:K00648 ko00061,ko01100,ko01212,map00061,map01100,map01212 M00082,M00083 R10707 RC00004,RC02729,RC02888 ko00000,ko00001,ko00002,ko01000,ko01004 - - - ACP_syn_III,ACP_syn_III_C BECNEDJF_03260 411477.PARMER_03980 1.22e-168 472.0 COG1028@1|root,COG1028@2|Bacteria,4NEAI@976|Bacteroidetes,2FNB4@200643|Bacteroidia,22WN3@171551|Porphyromonadaceae 976|Bacteroidetes IQ reductase fabG - 1.1.1.100 ko:K00059 ko00061,ko00333,ko00780,ko01040,ko01100,ko01130,ko01212,map00061,map00333,map00780,map01040,map01100,map01130,map01212 M00083,M00572 R04533,R04534,R04536,R04543,R04566,R04953,R04964,R07759,R07763,R10116,R10120,R11671 RC00029,RC00117 ko00000,ko00001,ko00002,ko01000,ko01004 - - - adh_short_C2 BECNEDJF_03261 411477.PARMER_03979 1.64e-166 464.0 COG0564@1|root,COG0564@2|Bacteria,4NFS8@976|Bacteroidetes,2FN9G@200643|Bacteroidia,22WC3@171551|Porphyromonadaceae 976|Bacteroidetes J Pseudouridine synthase rluC - 5.4.99.23,5.4.99.28,5.4.99.29 ko:K06177,ko:K06180 - - - - ko00000,ko01000,ko03009,ko03016 - - - PseudoU_synth_2 BECNEDJF_03262 411477.PARMER_03977 8.82e-213 588.0 COG0697@1|root,COG0697@2|Bacteria,4NGZ3@976|Bacteroidetes,2FP7S@200643|Bacteroidia,22XCP@171551|Porphyromonadaceae 976|Bacteroidetes EG membrane - - - - - - - - - - - - EamA BECNEDJF_03263 411477.PARMER_03978 2.55e-171 481.0 COG3142@1|root,COG3142@2|Bacteria,4NINY@976|Bacteroidetes,2FN71@200643|Bacteroidia,22XRN@171551|Porphyromonadaceae 976|Bacteroidetes P Participates in the control of copper homeostasis cutC - - ko:K06201 - - - - ko00000 - - - CutC BECNEDJF_03264 411477.PARMER_03976 6.67e-43 139.0 COG1983@1|root,COG1983@2|Bacteria,4NX1N@976|Bacteroidetes,2FUW2@200643|Bacteroidia,22YYQ@171551|Porphyromonadaceae 976|Bacteroidetes KT PspC domain - - - - - - - - - - - - PspC BECNEDJF_03265 411477.PARMER_03975 0.0 1315.0 COG0556@1|root,COG0556@2|Bacteria,4NE6E@976|Bacteroidetes,2FNBD@200643|Bacteroidia,22W4K@171551|Porphyromonadaceae 976|Bacteroidetes L damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and the UvrB-DNA preincision complex is formed. This complex is subsequently bound by UvrC and the second UvrB is released. If no lesion is found, the DNA wraps around the other UvrB subunit that will check the other stand for damage uvrB - - ko:K03702 ko03420,map03420 - - - ko00000,ko00001,ko03400 - - - Helicase_C,ResIII,UVR,UvrB BECNEDJF_03266 411477.PARMER_03974 1.34e-201 558.0 COG0657@1|root,COG0657@2|Bacteria,4NGAF@976|Bacteroidetes,2FSWW@200643|Bacteroidia,22XU8@171551|Porphyromonadaceae 976|Bacteroidetes I Protein of unknown function (DUF1460) - - - - - - - - - - - - DUF1460 BECNEDJF_03267 411477.PARMER_03973 0.0 1459.0 28J0I@1|root,2Z8XQ@2|Bacteria,4NK3G@976|Bacteroidetes,2G08X@200643|Bacteroidia,22XSJ@171551|Porphyromonadaceae 976|Bacteroidetes - - - - - - - - - - - - - - - ## 2833 queries scanned ## Total time (seconds): 227.84911704063416 ## Rate: 12.43 q/s