Rank Genome ID Species Strain BioSample ID Date Location Host Allelic distance ARGs VFs PGs PPRS 1 GCA_022737295.1 Parabacteroides merdae Map_68_015 SAMN20302001 2016-07-25 Mozambique Homo sapiens 0 0 0 1 1.00 2 GCA_003438825.1 Parabacteroides merdae OM06-16AC SAMN09736819 2013-12-01 China Homo sapiens 846 5 0 1 5.10 3 GCA_015547975.1 Parabacteroides merdae D54t1_190329_G1 SAMN15532705 2019-03-29 USA Homo sapiens 855 2 0 1 2.24 4 GCA_015553045.1 Parabacteroides merdae D53t1_180928_D7 SAMN15533003 2018-09-28 USA Homo sapiens 855 1 0 1 1.41 5 GCA_028326635.1 Parabacteroides merdae D54st1_C9_D54t1_190329 SAMN31322798 2019-03-29 USA Homo sapiens 855 2 0 1 2.24 6 GCA_028328345.1 Parabacteroides merdae D54st1_H2_D54t1_190329 SAMN31322801 2019-03-29 USA Homo sapiens 855 2 0 1 2.24 7 GCA_028328395.1 Parabacteroides merdae D54st1_G7_D54t1_190329 SAMN31322800 2019-03-29 USA Homo sapiens 855 2 0 1 2.24 8 GCA_028328425.1 Parabacteroides merdae D54st1_A3_D54t1_190329 SAMN31322797 2019-03-29 USA Homo sapiens 855 2 0 1 2.24 9 GCA_934841295.1 Parabacteroides merdae MTG233_bin.35.fa SAMEA13566726 - - - 856 1 0 1 1.41 10 GCA_934841555.1 Parabacteroides merdae MTG232_bin.14.fa SAMEA13566651 - - - 856 1 0 1 1.41 11 GCA_934852545.1 Parabacteroides merdae MTG234_bin.63.fa SAMEA13566805 - - - 856 1 0 1 1.41 12 GCA_934852715.1 Parabacteroides merdae MTG235_bin.14.fa SAMEA13566824 - - - 856 0 0 1 1.00 13 GCA_934854775.1 Parabacteroides merdae MTG237_bin.39.fa SAMEA13566987 - - - 856 1 0 1 1.41 14 GCA_934864295.1 Parabacteroides merdae MTG236_bin.17.fa SAMEA13566899 - - - 856 1 0 1 1.41 15 GCA_934871325.1 Parabacteroides merdae MTG240_bin.23.fa SAMEA13567126 - - - 856 0 0 1 1.00 16 GCA_934872915.1 Parabacteroides merdae MTG246_bin.22.fa SAMEA13567447 - - - 856 0 0 1 1.00 17 GCA_934876355.1 Parabacteroides merdae MTG239_bin.6.fa SAMEA13567058 - - - 856 1 0 1 1.41 18 GCA_934883205.1 Parabacteroides merdae MTG248_bin.24.fa SAMEA13567572 - - - 856 0 0 1 1.00 19 GCA_022746615.1 Parabacteroides merdae Map_129_021 SAMN20301217 2017-10-22 Mozambique Homo sapiens 858 0 0 1 1.00 20 GCA_021411685.1 Parabacteroides merdae BJH_172 SAMN20148139 - USA Homo sapiens 859 3 0 1 3.16 21 GCA_934875805.1 Parabacteroides merdae MTG247_bin.13.fa SAMEA13567497 - - - 860 1 0 1 1.41 22 GCA_934872035.1 Parabacteroides merdae MTG238_bin.2.fa SAMEA13566995 - - - 861 0 0 1 1.00 23 GCA_015558865.1 Parabacteroides merdae 1001136B_160425_B1 SAMN15533221 2016-04-25 USA Homo sapiens 862 4 0 1 4.12 24 GCA_028328305.1 Parabacteroides merdae RTP21484st1_A7_RTP21484_190118 SAMN31322802 2019-01-18 USA Homo sapiens 862 3 0 1 3.16 25 GCA_028328355.1 Parabacteroides merdae RTP21484st1_E1_RTP21484_190118 SAMN31322803 2019-01-18 USA Homo sapiens 862 3 0 1 3.16 26 GCA_958404825.1 Parabacteroides merdae ERR10960871_bin.1_MetaWRAP_v1.3_MAG SAMEA114061391 2018 Kenya - 864 0 0 1 1.00 27 GCA_028328385.1 Parabacteroides merdae 1028st1_A4_1028SCRN_200821 SAMN31322781 2020-08-21 USA Homo sapiens 867 1 0 1 1.41 28 GCA_018289315.1 Parabacteroides merdae CL06T03C08 SAMN16451193 2009-05 USA Homo sapiens 869 1 0 1 1.41 29 GCA_948465985.1 Parabacteroides merdae SRR17684618_bin.62_metawrap_v1.3_MAG SAMEA112353645 2021-01-01 Canada - 869 0 0 1 1.00 30 GCA_027693525.1 Parabacteroides merdae OF25-24MHA SAMN31809681 2014-02-01 China Homo sapiens 870 4 0 1 4.12 31 GCA_958410745.1 Parabacteroides merdae ERR9322429_bin.14_MetaWRAP_v1.3_MAG SAMEA114060956 - - - 871 0 0 1 1.00 32 GCA_020091365.1 Parabacteroides merdae BFG-280 SAMN15546958 1989 USA Homo sapiens 872 7 0 1 7.07 33 GCA_022785315.1 Parabacteroides merdae SUG938 SAMN26526162 2019 Canada Sus scrofa domesticus 873 2 0 1 2.24 34 GCA_034171025.1 Parabacteroides merdae SUG3465 SAMN37949450 2020 Canada swine 873 0 0 1 1.00 35 GCA_036552125.1 Parabacteroides merdae DOME_MAG_8922 SAMN38021852 - USA Homo sapiens 873 0 0 1 1.00 36 GCA_005844535.1 Parabacteroides merdae 1001175st1_A1 SAMN10863250 2016-03-14 USA Homo sapiens 874 6 0 1 6.08 37 GCA_015552245.1 Parabacteroides merdae 1001175B_160314_A1 SAMN15533086 2016-03-14 USA Homo sapiens 874 6 0 1 6.08 38 GCA_009719515.1 Parabacteroides merdae BIOML-A28 SAMN11946264 2016-02-19 USA Homo sapiens 875 4 0 1 4.12 39 GCA_009719555.1 Parabacteroides merdae BIOML-A29 SAMN11946265 2016-02-19 USA Homo sapiens 875 4 0 1 4.12 40 GCA_009719605.1 Parabacteroides merdae BIOML-A27 SAMN11946263 2016-02-19 USA Homo sapiens 875 4 0 1 4.12 41 GCA_015551905.1 Parabacteroides merdae D59t2_181005_G1 SAMN15532731 2018-10-05 USA Homo sapiens 875 1 0 1 1.41 42 GCA_022731965.1 Parabacteroides merdae Map_89_018 SAMN20302200 2016-03-10 Mozambique Homo sapiens 875 0 0 1 1.00 43 GCA_022733635.1 Parabacteroides merdae Map_8_012 SAMN20302118 2016-09-19 Mozambique Homo sapiens 875 0 0 1 1.00 44 GCA_022745165.1 Parabacteroides merdae Map_20_009 SAMN20301567 2015-06-17 Mozambique Homo sapiens 875 0 0 1 1.00 45 GCA_959019525.1 Parabacteroides merdae SRR20881974_bin.1_MetaWRAP_v1.3_MAG SAMEA114095515 2019-05-01 USA - 875 0 0 1 1.00 46 GCA_014870605.1 Parabacteroides merdae COPD090 SAMN12905037 2015-04/2016-09 Australia Homo sapiens 876 0 0 1 1.00 47 GCA_015558445.1 Parabacteroides merdae BSD2780120875b_170604_B5 SAMN15532601 2017-06-04 USA Homo sapiens 876 4 0 1 4.12 48 GCA_022734235.1 Parabacteroides merdae Map_77_010 SAMN20302087 2016-08-22 Mozambique Homo sapiens 876 0 0 1 1.00 49 GCA_028326715.1 Parabacteroides merdae BSD2780120875st1_C2_BSD2780120875_150330 SAMN31322789 2015-03-30 USA Homo sapiens 876 4 0 1 4.12 50 GCA_028326955.1 Parabacteroides merdae BSD2780120875st1_D1_BSD2780120875b_170604 SAMN31322790 2017-06-04 USA Homo sapiens 876 4 0 1 4.12 51 GCA_958417795.1 Parabacteroides merdae ERR9762700_bin.71_MetaWRAP_v1.3_MAG SAMEA114064420 2019 Sweden - 876 0 0 1 1.00 52 GCA_958432745.1 Parabacteroides merdae SRR17382092_bin.15_MetaWRAP_v1.3_MAG SAMEA114066320 2019-12 - - 876 0 0 1 1.00 53 GCA_003486345.1 Parabacteroides merdae UBA10754 SAMN08018394 - - - 877 0 0 1 1.00 54 GCA_009719905.1 Parabacteroides merdae BIOML-A8 SAMN11946244 2015-04-01 USA Homo sapiens 877 1 0 1 1.41 55 GCA_009720005.1 Parabacteroides merdae BIOML-A3 SAMN11946239 2015-04-01 USA Homo sapiens 877 1 0 1 1.41 56 GCA_015668095.1 Parabacteroides merdae 1001270H_150608_G12 SAMN15533348 2015-06-08 USA Homo sapiens 877 3 0 1 3.16 57 GCA_022723475.1 Parabacteroides merdae Map_52_012 SAMN20301842 2016-06-21 Mozambique Homo sapiens 877 0 0 1 1.00 58 GCA_022726515.1 Parabacteroides merdae Map_21_009 SAMN20301614 2015-05-13 Mozambique Homo sapiens 877 0 0 1 1.00 59 GCA_022783065.1 Parabacteroides merdae SUG879 SAMN26526103 2019 Canada Sus scrofa domesticus 877 2 0 1 2.24 60 GCA_024592595.1 Parabacteroides merdae GSH2021 SAMN30073203 - China Homo sapiens 877 5 0 1 5.10 61 GCA_027686215.1 Parabacteroides merdae AF102-62 SAMN31807809 2014-02-01 China Homo sapiens 877 2 0 1 2.24 62 GCA_028328505.1 Parabacteroides merdae D35st1_A5_D35t1_190705 SAMN31322793 2019-07-05 USA Homo sapiens 877 2 0 1 2.24 63 GCA_945828235.1 Parabacteroides merdae SRR5240731_bin.12_metaWRAP_v1.3_MAG SAMEA110360202 2016-08-01 Germany - 877 0 0 1 1.00 64 GCA_945864955.1 Parabacteroides merdae ERR1855551_bin.8_metaWRAP_v1.3_MAG SAMEA110402234 2016-08-01 Germany - 877 0 0 1 1.00 65 GCA_959597205.1 Parabacteroides merdae SRR16280061_bin.36_MetaWRAP_v1.3_MAG SAMEA114122542 2019-05-01/2020-10-30 China - 877 0 0 1 1.00 66 GCA_000307495.1 Parabacteroides merdae CL09T00C40 CL09T00C40 SAMN02463942 - - Homo sapiens 878 1 0 1 1.41 67 GCA_003475825.1 Parabacteroides merdae AF31-17 SAMN09734575 2014-01-01 China Homo sapiens 878 4 0 1 4.12 68 GCA_020563655.1 Parabacteroides merdae DFI.1.110 SAMN22167311 - USA Homo sapiens 878 2 0 1 2.24 69 GCA_022137325.1 Parabacteroides merdae DFI.1.88 SAMN24725983 - USA Homo sapiens 878 2 0 1 2.24 70 GCA_022138085.1 Parabacteroides merdae DFI.1.192 SAMN24725962 - USA Homo sapiens 878 2 0 1 2.24 71 GCA_022746415.1 Parabacteroides merdae Map_130_016 SAMN20301237 2017-08-21 Mozambique Homo sapiens 878 0 0 1 1.00 72 GCA_024463475.1 Parabacteroides merdae DFI.1.92 SAMN28944483 - USA Homo sapiens 878 2 0 1 2.24 73 GCA_000154105.1 Parabacteroides merdae ATCC 43184 ATCC 43184 SAMN00627057 - - Homo sapiens 879 2 0 1 2.24 74 GCA_009719875.1 Parabacteroides merdae BIOML-A10 SAMN11946246 2015-04-01 USA Homo sapiens 879 1 0 1 1.41 75 GCA_018784105.1 Parabacteroides merdae MCC685 SAMN12147421 - Ireland Homo sapiens 879 1 0 1 1.41 76 GCA_020735605.1 Parabacteroides merdae FDAARGOS_1586 SAMN22091683 - USA - 879 1 0 1 1.41 77 GCA_022835275.1 Parabacteroides merdae CE91-St3 SAMD00389890 2018-11-01 Japan Homo sapiens 879 2 0 1 2.24 78 GCA_025151215.1 Parabacteroides merdae ATCC 43184 ATCC 43184 SAMN20222701 - - Homo sapiens 879 1 0 1 1.41 79 GCA_900445495.1 Parabacteroides merdae NCTC13052 SAMEA48404668 1900/1997 - - 879 1 0 1 1.41 80 GCA_946494615.1 Parabacteroides merdae ERR4304505_bin.61_MetaWRAP_v1.1_MAG SAMEA110702525 2019-10-15 Spain - 879 0 0 1 1.00 81 GCA_958351535.1 Parabacteroides merdae ERR4918982_bin.16_MetaWRAP_v1.3_MAG SAMEA114062695 2019-02-12 China - 879 0 0 1 1.00 82 GCA_958443225.1 Parabacteroides merdae ERR9578215_bin.4_MetaWRAP_v1.3_MAG SAMEA114063045 2018 Germany - 879 1 0 1 1.41 83 GCA_003458945.1 Parabacteroides merdae AF26-22BH SAMN09734513 2013-12-01 China Homo sapiens 880 2 0 1 2.24 84 GCA_958402135.1 Parabacteroides merdae ERR9492513_bin.11_MetaWRAP_v1.3_MAG SAMEA114063947 - - - 880 0 0 1 1.00 85 GCA_019042155.1 Parabacteroides merdae DFI.4.154 SAMN19732234 - USA Homo sapiens 881 2 0 1 2.24 86 GCA_022136865.1 Parabacteroides merdae DFI.4.164 SAMN24725996 - USA Homo sapiens 881 1 0 1 1.41 87 GCA_024463155.2 Parabacteroides merdae DFI.4.73 SAMN28944501 - USA Homo sapiens 881 1 0 1 1.41 88 GCA_027686665.1 Parabacteroides merdae AF101-95 SAMN31807787 2014-02-01 China Homo sapiens 881 5 0 1 5.10 89 GCA_027686805.1 Parabacteroides merdae AF101-58 SAMN31807779 2014-02-01 China Homo sapiens 881 5 0 1 5.10 90 GCA_003503315.1 Parabacteroides merdae UBA11761 SAMN08019002 - - - 882 0 0 1 1.00 91 GCA_024125345.1 Parabacteroides merdae NB2A-29-D6 SAMN28102043 2016-04 - Homo sapiens 882 3 0 1 3.16 92 GCA_028326705.1 Parabacteroides merdae D35st1_A2_D35t1_190705 SAMN31322792 2019-07-05 USA Homo sapiens 882 2 0 1 2.24 93 GCA_959026335.1 Parabacteroides merdae SRR13494520_bin.54_MetaWRAP_v1.3_MAG SAMEA114096697 2018-01-17 USA - 882 0 0 1 1.00 94 GCA_000433955.1 Parabacteroides merdae CAG:48 SAMEA3138585 - - - 883 0 0 1 1.00 95 GCA_009677855.1 Parabacteroides merdae BIOML-A1 SAMN11946237 2015-04-01 USA Homo sapiens 883 2 0 1 2.24 96 GCA_009719915.1 Parabacteroides merdae BIOML-A9 SAMN11946245 2015-04-01 USA Homo sapiens 883 2 0 1 2.24 97 GCA_009719945.1 Parabacteroides merdae BIOML-A7 SAMN11946243 2015-04-01 USA Homo sapiens 883 2 0 1 2.24 98 GCA_009719965.1 Parabacteroides merdae BIOML-A5 SAMN11946241 2015-04-01 USA Homo sapiens 883 2 0 1 2.24 99 GCA_009719975.1 Parabacteroides merdae BIOML-A6 SAMN11946242 2015-04-01 USA Homo sapiens 883 2 0 1 2.24 100 GCA_009720015.1 Parabacteroides merdae BIOML-A4 SAMN11946240 2015-04-01 USA Homo sapiens 883 2 0 1 2.24