GCA_022801075.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaPBPAGIDJ_66 (original name was: gnl|Prokka|PBPAGIDJ_66)

Region	Type	From	To	Most similar known cluster		Similarity
Region 66.1	RRE-containing	47,495	61,164

gnlProkkaPBPAGIDJ_67 (original name was: gnl|Prokka|PBPAGIDJ_67)

Region	Type	From	To	Most similar known cluster		Similarity
Region 67.1	NRPS	1	38,301

No secondary metabolite regions were found in these records:: gnlProkkaPBPAGIDJ_1 (original name was: gnl|Prokka|PBPAGIDJ_1); gnlProkkaPBPAGIDJ_2 (original name was: gnl|Prokka|PBPAGIDJ_2); gnlProkkaPBPAGIDJ_3 (original name was: gnl|Prokka|PBPAGIDJ_3); gnlProkkaPBPAGIDJ_4 (original name was: gnl|Prokka|PBPAGIDJ_4); gnlProkkaPBPAGIDJ_5 (original name was: gnl|Prokka|PBPAGIDJ_5); gnlProkkaPBPAGIDJ_6 (original name was: gnl|Prokka|PBPAGIDJ_6); gnlProkkaPBPAGIDJ_7 (original name was: gnl|Prokka|PBPAGIDJ_7); gnlProkkaPBPAGIDJ_8 (original name was: gnl|Prokka|PBPAGIDJ_8); gnlProkkaPBPAGIDJ_9 (original name was: gnl|Prokka|PBPAGIDJ_9); gnlProkkaPBPAGIDJ_10 (original name was: gnl|Prokka|PBPAGIDJ_10); gnlProkkaPBPAGIDJ_11 (original name was: gnl|Prokka|PBPAGIDJ_11); gnlProkkaPBPAGIDJ_12 (original name was: gnl|Prokka|PBPAGIDJ_12); gnlProkkaPBPAGIDJ_13 (original name was: gnl|Prokka|PBPAGIDJ_13); gnlProkkaPBPAGIDJ_14 (original name was: gnl|Prokka|PBPAGIDJ_14); gnlProkkaPBPAGIDJ_15 (original name was: gnl|Prokka|PBPAGIDJ_15); gnlProkkaPBPAGIDJ_16 (original name was: gnl|Prokka|PBPAGIDJ_16); gnlProkkaPBPAGIDJ_17 (original name was: gnl|Prokka|PBPAGIDJ_17); gnlProkkaPBPAGIDJ_18 (original name was: gnl|Prokka|PBPAGIDJ_18); gnlProkkaPBPAGIDJ_19 (original name was: gnl|Prokka|PBPAGIDJ_19); gnlProkkaPBPAGIDJ_20 (original name was: gnl|Prokka|PBPAGIDJ_20); gnlProkkaPBPAGIDJ_21 (original name was: gnl|Prokka|PBPAGIDJ_21); gnlProkkaPBPAGIDJ_22 (original name was: gnl|Prokka|PBPAGIDJ_22); gnlProkkaPBPAGIDJ_23 (original name was: gnl|Prokka|PBPAGIDJ_23); gnlProkkaPBPAGIDJ_24 (original name was: gnl|Prokka|PBPAGIDJ_24); gnlProkkaPBPAGIDJ_25 (original name was: gnl|Prokka|PBPAGIDJ_25); gnlProkkaPBPAGIDJ_26 (original name was: gnl|Prokka|PBPAGIDJ_26); gnlProkkaPBPAGIDJ_27 (original name was: gnl|Prokka|PBPAGIDJ_27); gnlProkkaPBPAGIDJ_28 (original name was: gnl|Prokka|PBPAGIDJ_28); gnlProkkaPBPAGIDJ_29 (original name was: gnl|Prokka|PBPAGIDJ_29); gnlProkkaPBPAGIDJ_30 (original name was: gnl|Prokka|PBPAGIDJ_30); gnlProkkaPBPAGIDJ_31 (original name was: gnl|Prokka|PBPAGIDJ_31); gnlProkkaPBPAGIDJ_32 (original name was: gnl|Prokka|PBPAGIDJ_32); gnlProkkaPBPAGIDJ_33 (original name was: gnl|Prokka|PBPAGIDJ_33); gnlProkkaPBPAGIDJ_34 (original name was: gnl|Prokka|PBPAGIDJ_34); gnlProkkaPBPAGIDJ_35 (original name was: gnl|Prokka|PBPAGIDJ_35); gnlProkkaPBPAGIDJ_36 (original name was: gnl|Prokka|PBPAGIDJ_36); gnlProkkaPBPAGIDJ_37 (original name was: gnl|Prokka|PBPAGIDJ_37); gnlProkkaPBPAGIDJ_38 (original name was: gnl|Prokka|PBPAGIDJ_38); gnlProkkaPBPAGIDJ_39 (original name was: gnl|Prokka|PBPAGIDJ_39); gnlProkkaPBPAGIDJ_40 (original name was: gnl|Prokka|PBPAGIDJ_40); gnlProkkaPBPAGIDJ_41 (original name was: gnl|Prokka|PBPAGIDJ_41); gnlProkkaPBPAGIDJ_42 (original name was: gnl|Prokka|PBPAGIDJ_42); gnlProkkaPBPAGIDJ_43 (original name was: gnl|Prokka|PBPAGIDJ_43); gnlProkkaPBPAGIDJ_44 (original name was: gnl|Prokka|PBPAGIDJ_44); gnlProkkaPBPAGIDJ_45 (original name was: gnl|Prokka|PBPAGIDJ_45); gnlProkkaPBPAGIDJ_46 (original name was: gnl|Prokka|PBPAGIDJ_46); gnlProkkaPBPAGIDJ_47 (original name was: gnl|Prokka|PBPAGIDJ_47); gnlProkkaPBPAGIDJ_48 (original name was: gnl|Prokka|PBPAGIDJ_48); gnlProkkaPBPAGIDJ_49 (original name was: gnl|Prokka|PBPAGIDJ_49); gnlProkkaPBPAGIDJ_50 (original name was: gnl|Prokka|PBPAGIDJ_50); gnlProkkaPBPAGIDJ_51 (original name was: gnl|Prokka|PBPAGIDJ_51); gnlProkkaPBPAGIDJ_52 (original name was: gnl|Prokka|PBPAGIDJ_52); gnlProkkaPBPAGIDJ_53 (original name was: gnl|Prokka|PBPAGIDJ_53); gnlProkkaPBPAGIDJ_54 (original name was: gnl|Prokka|PBPAGIDJ_54); gnlProkkaPBPAGIDJ_55 (original name was: gnl|Prokka|PBPAGIDJ_55); gnlProkkaPBPAGIDJ_56 (original name was: gnl|Prokka|PBPAGIDJ_56); gnlProkkaPBPAGIDJ_57 (original name was: gnl|Prokka|PBPAGIDJ_57); gnlProkkaPBPAGIDJ_58 (original name was: gnl|Prokka|PBPAGIDJ_58); gnlProkkaPBPAGIDJ_59 (original name was: gnl|Prokka|PBPAGIDJ_59); gnlProkkaPBPAGIDJ_60 (original name was: gnl|Prokka|PBPAGIDJ_60); gnlProkkaPBPAGIDJ_61 (original name was: gnl|Prokka|PBPAGIDJ_61); gnlProkkaPBPAGIDJ_62 (original name was: gnl|Prokka|PBPAGIDJ_62); gnlProkkaPBPAGIDJ_63 (original name was: gnl|Prokka|PBPAGIDJ_63); gnlProkkaPBPAGIDJ_64 (original name was: gnl|Prokka|PBPAGIDJ_64); gnlProkkaPBPAGIDJ_65 (original name was: gnl|Prokka|PBPAGIDJ_65); gnlProkkaPBPAGIDJ_68 (original name was: gnl|Prokka|PBPAGIDJ_68); gnlProkkaPBPAGIDJ_69 (original name was: gnl|Prokka|PBPAGIDJ_69); gnlProkkaPBPAGIDJ_70 (original name was: gnl|Prokka|PBPAGIDJ_70); gnlProkkaPBPAGIDJ_71 (original name was: gnl|Prokka|PBPAGIDJ_71); gnlProkkaPBPAGIDJ_72 (original name was: gnl|Prokka|PBPAGIDJ_72); gnlProkkaPBPAGIDJ_73 (original name was: gnl|Prokka|PBPAGIDJ_73); gnlProkkaPBPAGIDJ_74 (original name was: gnl|Prokka|PBPAGIDJ_74); gnlProkkaPBPAGIDJ_75 (original name was: gnl|Prokka|PBPAGIDJ_75); gnlProkkaPBPAGIDJ_76 (original name was: gnl|Prokka|PBPAGIDJ_76); gnlProkkaPBPAGIDJ_77 (original name was: gnl|Prokka|PBPAGIDJ_77); gnlProkkaPBPAGIDJ_78 (original name was: gnl|Prokka|PBPAGIDJ_78); gnlProkkaPBPAGIDJ_79 (original name was: gnl|Prokka|PBPAGIDJ_79); gnlProkkaPBPAGIDJ_80 (original name was: gnl|Prokka|PBPAGIDJ_80); gnlProkkaPBPAGIDJ_81 (original name was: gnl|Prokka|PBPAGIDJ_81); gnlProkkaPBPAGIDJ_82 (original name was: gnl|Prokka|PBPAGIDJ_82); gnlProkkaPBPAGIDJ_83 (original name was: gnl|Prokka|PBPAGIDJ_83); gnlProkkaPBPAGIDJ_84 (original name was: gnl|Prokka|PBPAGIDJ_84); gnlProkkaPBPAGIDJ_85 (original name was: gnl|Prokka|PBPAGIDJ_85); gnlProkkaPBPAGIDJ_86 (original name was: gnl|Prokka|PBPAGIDJ_86); gnlProkkaPBPAGIDJ_87 (original name was: gnl|Prokka|PBPAGIDJ_87); gnlProkkaPBPAGIDJ_88 (original name was: gnl|Prokka|PBPAGIDJ_88); gnlProkkaPBPAGIDJ_89 (original name was: gnl|Prokka|PBPAGIDJ_89); gnlProkkaPBPAGIDJ_90 (original name was: gnl|Prokka|PBPAGIDJ_90); gnlProkkaPBPAGIDJ_91 (original name was: gnl|Prokka|PBPAGIDJ_91); gnlProkkaPBPAGIDJ_92 (original name was: gnl|Prokka|PBPAGIDJ_92); gnlProkkaPBPAGIDJ_93 (original name was: gnl|Prokka|PBPAGIDJ_93); gnlProkkaPBPAGIDJ_94 (original name was: gnl|Prokka|PBPAGIDJ_94); gnlProkkaPBPAGIDJ_95 (original name was: gnl|Prokka|PBPAGIDJ_95); gnlProkkaPBPAGIDJ_96 (original name was: gnl|Prokka|PBPAGIDJ_96); gnlProkkaPBPAGIDJ_97 (original name was: gnl|Prokka|PBPAGIDJ_97); gnlProkkaPBPAGIDJ_98 (original name was: gnl|Prokka|PBPAGIDJ_98); gnlProkkaPBPAGIDJ_99 (original name was: gnl|Prokka|PBPAGIDJ_99); gnlProkkaPBPAGIDJ_100 (original name was: gnl|Prokka|PBPAGIDJ_100); gnlProkkaPBPAGIDJ_101 (original name was: gnl|Prokka|PBPAGIDJ_101); gnlProkkaPBPAGIDJ_102 (original name was: gnl|Prokka|PBPAGIDJ_102); gnlProkkaPBPAGIDJ_103 (original name was: gnl|Prokka|PBPAGIDJ_103); gnlProkkaPBPAGIDJ_104 (original name was: gnl|Prokka|PBPAGIDJ_104); gnlProkkaPBPAGIDJ_105 (original name was: gnl|Prokka|PBPAGIDJ_105); gnlProkkaPBPAGIDJ_106 (original name was: gnl|Prokka|PBPAGIDJ_106); gnlProkkaPBPAGIDJ_107 (original name was: gnl|Prokka|PBPAGIDJ_107); gnlProkkaPBPAGIDJ_108 (original name was: gnl|Prokka|PBPAGIDJ_108); gnlProkkaPBPAGIDJ_109 (original name was: gnl|Prokka|PBPAGIDJ_109); gnlProkkaPBPAGIDJ_110 (original name was: gnl|Prokka|PBPAGIDJ_110); gnlProkkaPBPAGIDJ_111 (original name was: gnl|Prokka|PBPAGIDJ_111); gnlProkkaPBPAGIDJ_112 (original name was: gnl|Prokka|PBPAGIDJ_112); gnlProkkaPBPAGIDJ_113 (original name was: gnl|Prokka|PBPAGIDJ_113); gnlProkkaPBPAGIDJ_114 (original name was: gnl|Prokka|PBPAGIDJ_114); gnlProkkaPBPAGIDJ_115 (original name was: gnl|Prokka|PBPAGIDJ_115); gnlProkkaPBPAGIDJ_116 (original name was: gnl|Prokka|PBPAGIDJ_116); gnlProkkaPBPAGIDJ_117 (original name was: gnl|Prokka|PBPAGIDJ_117); gnlProkkaPBPAGIDJ_118 (original name was: gnl|Prokka|PBPAGIDJ_118); gnlProkkaPBPAGIDJ_119 (original name was: gnl|Prokka|PBPAGIDJ_119); gnlProkkaPBPAGIDJ_120 (original name was: gnl|Prokka|PBPAGIDJ_120); gnlProkkaPBPAGIDJ_121 (original name was: gnl|Prokka|PBPAGIDJ_121); gnlProkkaPBPAGIDJ_122 (original name was: gnl|Prokka|PBPAGIDJ_122); gnlProkkaPBPAGIDJ_123 (original name was: gnl|Prokka|PBPAGIDJ_123); gnlProkkaPBPAGIDJ_124 (original name was: gnl|Prokka|PBPAGIDJ_124); gnlProkkaPBPAGIDJ_125 (original name was: gnl|Prokka|PBPAGIDJ_125); gnlProkkaPBPAGIDJ_126 (original name was: gnl|Prokka|PBPAGIDJ_126); gnlProkkaPBPAGIDJ_127 (original name was: gnl|Prokka|PBPAGIDJ_127); gnlProkkaPBPAGIDJ_128 (original name was: gnl|Prokka|PBPAGIDJ_128); gnlProkkaPBPAGIDJ_129 (original name was: gnl|Prokka|PBPAGIDJ_129); gnlProkkaPBPAGIDJ_130 (original name was: gnl|Prokka|PBPAGIDJ_130); gnlProkkaPBPAGIDJ_131 (original name was: gnl|Prokka|PBPAGIDJ_131); gnlProkkaPBPAGIDJ_132 (original name was: gnl|Prokka|PBPAGIDJ_132); gnlProkkaPBPAGIDJ_133 (original name was: gnl|Prokka|PBPAGIDJ_133); gnlProkkaPBPAGIDJ_134 (original name was: gnl|Prokka|PBPAGIDJ_134); gnlProkkaPBPAGIDJ_135 (original name was: gnl|Prokka|PBPAGIDJ_135); gnlProkkaPBPAGIDJ_136 (original name was: gnl|Prokka|PBPAGIDJ_136); gnlProkkaPBPAGIDJ_137 (original name was: gnl|Prokka|PBPAGIDJ_137); gnlProkkaPBPAGIDJ_138 (original name was: gnl|Prokka|PBPAGIDJ_138); gnlProkkaPBPAGIDJ_139 (original name was: gnl|Prokka|PBPAGIDJ_139); gnlProkkaPBPAGIDJ_140 (original name was: gnl|Prokka|PBPAGIDJ_140); gnlProkkaPBPAGIDJ_141 (original name was: gnl|Prokka|PBPAGIDJ_141); gnlProkkaPBPAGIDJ_142 (original name was: gnl|Prokka|PBPAGIDJ_142); gnlProkkaPBPAGIDJ_143 (original name was: gnl|Prokka|PBPAGIDJ_143); gnlProkkaPBPAGIDJ_144 (original name was: gnl|Prokka|PBPAGIDJ_144); gnlProkkaPBPAGIDJ_145 (original name was: gnl|Prokka|PBPAGIDJ_145); gnlProkkaPBPAGIDJ_146 (original name was: gnl|Prokka|PBPAGIDJ_146); gnlProkkaPBPAGIDJ_147 (original name was: gnl|Prokka|PBPAGIDJ_147); gnlProkkaPBPAGIDJ_148 (original name was: gnl|Prokka|PBPAGIDJ_148); gnlProkkaPBPAGIDJ_149 (original name was: gnl|Prokka|PBPAGIDJ_149); gnlProkkaPBPAGIDJ_150 (original name was: gnl|Prokka|PBPAGIDJ_150); gnlProkkaPBPAGIDJ_151 (original name was: gnl|Prokka|PBPAGIDJ_151); gnlProkkaPBPAGIDJ_152 (original name was: gnl|Prokka|PBPAGIDJ_152); gnlProkkaPBPAGIDJ_153 (original name was: gnl|Prokka|PBPAGIDJ_153)

Compact view

gnlProkkaPBPAGIDJ_66 - Region 1 - RRE-containing

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Location: 47,495 - 61,164 nt. (total: 13,670 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaPBPAGIDJ_67 - Region 1 - NRPS

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Location: 1 - 38,301 nt. (total: 38,301 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

NRPS/PKS domains

KnownClusterBlast

NRPS/PKS modules

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

No matches found.

Module view

Legend

NRPS/PKS products

NRPS/PKS substrates

Predicted core structure(s)

For candidate cluster 1, location 0 - 38301:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (X - X)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS substrate predictions

ctg67_22

AMP-binding (8..447): X

nrpys: Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DYFGSGSLIK
Nearest Stachelhaus code(s):: Ala DMGGFGCLIK (50% 8Å match); Leu DYFTFGLIIK (41% 8Å match); Hpr DYQYCGHLIK (32% 8Å match)
Stachelhaus code match:: 60% (weak)

AMP-binding (1210..1629): X

nrpys: Tyr, bOH-Tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic (Ala, Gly, Val, Leu, Ile, Abu, Ival, Ser, Thr, Hpg, Dhpg, Cys, Pro, Hpr)
Large clusters prediction:: N/A
Small clusters prediction:: Polar aromatic ring (Tyr, bOH-Tyr)
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: DMTNMGEVAK
Nearest Stachelhaus code(s):: Asn DMTKVGEVGK (56% 8Å match)
Stachelhaus code match:: 70% (weak)