GCA_023168025.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaIKJCJEDI_1 (original name was: gnl|Prokka|IKJCJEDI_1)

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	106,790	117,797

gnlProkkaIKJCJEDI_14 (original name was: gnl|Prokka|IKJCJEDI_14)

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	T3PKS	1	25,674

gnlProkkaIKJCJEDI_24 (original name was: gnl|Prokka|IKJCJEDI_24)

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	terpene	395,182	416,063

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	106,790	117,797
Region 13.1	T3PKS	1	25,674
Region 23.1	terpene	395,182	416,063

No secondary metabolite regions were found in these records:: gnlProkkaIKJCJEDI_2 (original name was: gnl|Prokka|IKJCJEDI_2); gnlProkkaIKJCJEDI_4 (original name was: gnl|Prokka|IKJCJEDI_4); gnlProkkaIKJCJEDI_5 (original name was: gnl|Prokka|IKJCJEDI_5); gnlProkkaIKJCJEDI_6 (original name was: gnl|Prokka|IKJCJEDI_6); gnlProkkaIKJCJEDI_7 (original name was: gnl|Prokka|IKJCJEDI_7); gnlProkkaIKJCJEDI_8 (original name was: gnl|Prokka|IKJCJEDI_8); gnlProkkaIKJCJEDI_9 (original name was: gnl|Prokka|IKJCJEDI_9); gnlProkkaIKJCJEDI_10 (original name was: gnl|Prokka|IKJCJEDI_10); gnlProkkaIKJCJEDI_11 (original name was: gnl|Prokka|IKJCJEDI_11); gnlProkkaIKJCJEDI_12 (original name was: gnl|Prokka|IKJCJEDI_12); gnlProkkaIKJCJEDI_13 (original name was: gnl|Prokka|IKJCJEDI_13); gnlProkkaIKJCJEDI_15 (original name was: gnl|Prokka|IKJCJEDI_15); gnlProkkaIKJCJEDI_16 (original name was: gnl|Prokka|IKJCJEDI_16); gnlProkkaIKJCJEDI_17 (original name was: gnl|Prokka|IKJCJEDI_17); gnlProkkaIKJCJEDI_18 (original name was: gnl|Prokka|IKJCJEDI_18); gnlProkkaIKJCJEDI_19 (original name was: gnl|Prokka|IKJCJEDI_19); gnlProkkaIKJCJEDI_20 (original name was: gnl|Prokka|IKJCJEDI_20); gnlProkkaIKJCJEDI_21 (original name was: gnl|Prokka|IKJCJEDI_21); gnlProkkaIKJCJEDI_22 (original name was: gnl|Prokka|IKJCJEDI_22); gnlProkkaIKJCJEDI_23 (original name was: gnl|Prokka|IKJCJEDI_23); gnlProkkaIKJCJEDI_25 (original name was: gnl|Prokka|IKJCJEDI_25); gnlProkkaIKJCJEDI_26 (original name was: gnl|Prokka|IKJCJEDI_26); gnlProkkaIKJCJEDI_27 (original name was: gnl|Prokka|IKJCJEDI_27); gnlProkkaIKJCJEDI_28 (original name was: gnl|Prokka|IKJCJEDI_28); gnlProkkaIKJCJEDI_30 (original name was: gnl|Prokka|IKJCJEDI_30); gnlProkkaIKJCJEDI_33 (original name was: gnl|Prokka|IKJCJEDI_33); gnlProkkaIKJCJEDI_34 (original name was: gnl|Prokka|IKJCJEDI_34); gnlProkkaIKJCJEDI_35 (original name was: gnl|Prokka|IKJCJEDI_35); gnlProkkaIKJCJEDI_42 (original name was: gnl|Prokka|IKJCJEDI_42); gnlProkkaIKJCJEDI_43 (original name was: gnl|Prokka|IKJCJEDI_43); gnlProkkaIKJCJEDI_45 (original name was: gnl|Prokka|IKJCJEDI_45); gnlProkkaIKJCJEDI_48 (original name was: gnl|Prokka|IKJCJEDI_48)

Compact view

gnlProkkaIKJCJEDI_1 - Region 1 - RiPP-like

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Location: 106,790 - 117,797 nt. (total: 11,008 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIKJCJEDI_14 - Region 1 - T3PKS

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Location: 1 - 25,674 nt. (total: 25,674 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaIKJCJEDI_24 - Region 1 - terpene

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Location: 395,182 - 416,063 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.