GCA_023278425.1 - 12 region(s)

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	NRPS	322,161	387,568	surfactin	NRP:Lipopeptide	82%
Region 1.2	PKS-like	924,017	965,261	butirosin A/butirosin B	Saccharide	7%
Region 1.3	terpene	1,047,305	1,068,045
Region 1.4	lanthipeptide-class-ii	1,188,538	1,217,426
Region 1.5	transAT-PKS	1,383,989	1,472,222	macrolactin H	Polyketide	100%
Region 1.6	transAT-PKS,T3PKS,NRPS	1,690,912	1,801,005	bacillaene	Polyketide+NRP	100%
Region 1.7	NRPS,transAT-PKS,betalactone	1,865,636	2,003,437	fengycin	NRP	100%
Region 1.8	terpene	2,028,664	2,050,547
Region 1.9	T3PKS	2,113,865	2,154,965
Region 1.10	transAT-PKS	2,269,951	2,376,133	difficidin	Polyketide	100%
Region 1.11	NRP-metallophore,NRPS,RiPP-like	3,000,837	3,052,628	bacillibactin	NRP	100%
Region 1.12	other	3,588,938	3,630,356	bacilysin	Other	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	NRPS	322,161	387,568	surfactin	NRP:Lipopeptide	82%
Region 1.2	PKS-like	924,017	965,261	butirosin A/butirosin B	Saccharide	7%
Region 1.3	terpene	1,047,305	1,068,045
Region 1.4	lanthipeptide-class-ii	1,188,538	1,217,426
Region 1.5	transAT-PKS	1,383,989	1,472,222	macrolactin H	Polyketide	100%
Region 1.6	transAT-PKS,T3PKS,NRPS	1,690,912	1,801,005	bacillaene	Polyketide+NRP	100%
Region 1.7	NRPS,transAT-PKS,betalactone	1,865,636	2,003,437	fengycin	NRP	100%
Region 1.8	terpene	2,028,664	2,050,547
Region 1.9	T3PKS	2,113,865	2,154,965
Region 1.10	transAT-PKS	2,269,951	2,376,133	difficidin	Polyketide	100%
Region 1.11	NRP-metallophore,NRPS,RiPP-like	3,000,837	3,052,628	bacillibactin	NRP	100%
Region 1.12	other	3,588,938	3,630,356	bacilysin	Other	100%

gnlProkkaIGODAKOP_1 - Region 1 - NRPS

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Location: 322,161 - 387,568 nt. (total: 65,408 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

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gnlProkkaIGODAKOP_1 - Region 2 - PKS-like

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Location: 924,017 - 965,261 nt. (total: 41,245 nt) Show pHMM detection rules used

PKS-like: (t2pks2 or ksIII)

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gnlProkkaIGODAKOP_1 - Region 3 - terpene

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Location: 1,047,305 - 1,068,045 nt. (total: 20,741 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

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resistance

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gnlProkkaIGODAKOP_1 - Region 4 - lanthipeptide-class-ii

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Location: 1,188,538 - 1,217,426 nt. (total: 28,889 nt) Show pHMM detection rules used

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

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core biosynthetic genes

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gnlProkkaIGODAKOP_1 - Region 5 - transAT-PKS

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Location: 1,383,989 - 1,472,222 nt. (total: 88,234 nt) Show pHMM detection rules used

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core biosynthetic genes

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resistance

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gnlProkkaIGODAKOP_1 - Region 6 - NRPS,T3PKS,transAT-PKS

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Location: 1,690,912 - 1,801,005 nt. (total: 110,094 nt) Show pHMM detection rules used

transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))
T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)
NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

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resistance

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gnlProkkaIGODAKOP_1 - Region 7 - NRPS,betalactone,transAT-PKS

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Location: 1,865,636 - 2,003,437 nt. (total: 137,802 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))
transAT-PKS: (cds(PKS_AT and not (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) and (cds(ATd and (PKS_KS or ene_KS or mod_KS or hyb_KS or itr_KS or tra_KS)) or cds(tra_KS and PP-binding)))
betalactone: (HMGL-like and AMP-binding)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaIGODAKOP_1 - Region 8 - terpene

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Location: 2,028,664 - 2,050,547 nt. (total: 21,884 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

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other genes

resistance

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gnlProkkaIGODAKOP_1 - Region 9 - T3PKS

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Location: 2,113,865 - 2,154,965 nt. (total: 41,101 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

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other genes

resistance

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gnlProkkaIGODAKOP_1 - Region 10 - transAT-PKS

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Location: 2,269,951 - 2,376,133 nt. (total: 106,183 nt) Show pHMM detection rules used

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaIGODAKOP_1 - Region 11 - NRP-metallophore,NRPS,RiPP-like

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Location: 3,000,837 - 3,052,628 nt. (total: 51,792 nt) Show pHMM detection rules used

NRP-metallophore: (VibH_like or Cy_tandem or (cds(Condensation and AMP-binding) and ((IBH_Asp and not SBH_Asp) or IBH_His or TBH_Asp or CyanoBH_Asp1 or CyanoBH_Asp2 or IPL or SalSyn or (EntA and EntC) or (GrbD and GrbE) or (FbnL and FbnM) or PvdO or PvdP or (Orn_monoox and not (KtzT or MetRS-like)) or Lys_monoox or VbsL)))
NRPS: cds(Condensation and (AMP-binding or A-OX))
RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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gnlProkkaIGODAKOP_1 - Region 12 - other

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Location: 3,588,938 - 3,630,356 nt. (total: 41,419 nt) Show pHMM detection rules used

other: (LmbU or Neocarzinostat or bcpB or frbD or mitE or vlmB or prnB or CaiA or bacilysin or orf2_PTase)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Identified secondary metabolite regions using strictness 'relaxed'

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Lanthipeptide(s) for ctg1_1176

MIBiG 3.1 matches for ctg1_1175

antiSMASH-DB 4.0 matches for ctg1_1175

MIBiG 3.1 matches for ctg1_1178

antiSMASH-DB 4.0 matches for ctg1_1178

MIBiG 3.1 matches for ctg1_1179

antiSMASH-DB 4.0 matches for ctg1_1179

Lanthipeptide(s) for ctg1_1180

MIBiG 3.1 matches for ctg1_1175

antiSMASH-DB 4.0 matches for ctg1_1175

MIBiG 3.1 matches for ctg1_1178

antiSMASH-DB 4.0 matches for ctg1_1178

MIBiG 3.1 matches for ctg1_1179

antiSMASH-DB 4.0 matches for ctg1_1179

MIBiG 3.1 matches for ctg1_1192

antiSMASH-DB 4.0 matches for ctg1_1192

MIBiG 3.1 matches for allorf_1203859_1204041

antiSMASH-DB 4.0 matches for allorf_1203859_1204041

antiSMASH-DB 4.0 matches for allorf_1210352_1210429

antiSMASH-DB 4.0 matches for allorf_1214173_1214376

antiSMASH-DB 4.0 matches for allorf_1217064_1217165

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