Rank	Genome ID	Species	Strain	BioSample ID	Date	Location	Host	Allelic distance	ARGs	VFs	PGs	PPRS
1	GCA_023470655.1	Lacticaseibacillus paracasei	MA3	SAMN27413142	2019-12-08	South Africa: Durban	-	0	0	0	2	2.00
2	GCA_018966985.1	Lacticaseibacillus paracasei	MA2	SAMN19670536	2019-12-08	South Africa: Durban	-	12	0	0	2	2.00
3	GCA_004368475.1	Lacticaseibacillus paracasei	INF 10	SAMN03290702	2000	Norway	-	163	0	0	2	2.00
4	GCA_004368495.1	Lacticaseibacillus paracasei	INF 456	SAMN03290701	2000	Norway	-	164	0	0	2	2.00
5	GCA_002442835.1	Lacticaseibacillus paracasei	FAM18149	SAMN05781319	-	Switzerland	-	171	0	0	1	1.00
6	GCA_003712485.1	Lacticaseibacillus paracasei	FAM18149	SAMN04088873	2003	Switzerland	-	171	0	0	2	2.00
7	GCA_003712505.1	Lacticaseibacillus paracasei	FAM18168	SAMN04088875	2003	Switzerland	-	171	0	0	2	2.00
8	GCA_000410155.1	Lacticaseibacillus paracasei subsp. paracasei Lpp22	Lpp22	SAMN02469708	1987	-	-	172	0	0	2	2.00
9	GCA_039631265.1	Lacticaseibacillus paracasei	B14	SAMN41249971	2023-04-25	Slovakia	-	174	0	0	2	2.00
10	GCA_025190775.1	Lacticaseibacillus paracasei	CIRM-BIA 1440	SAMN10365437	1980	France	-	175	0	0	2	2.00
11	GCA_018967025.1	Lacticaseibacillus paracasei	ABK	SAMN19670535	2019-12-20	Russia: Moscow	-	176	0	0	2	2.00
12	GCA_023470645.1	Lacticaseibacillus paracasei	KF1	SAMN27413141	2019-12-20	Russia: Moscow	-	178	0	0	2	2.00
13	GCA_003712525.1	Lacticaseibacillus paracasei	FAM18133	SAMN04088872	2003	Switzerland	-	188	0	0	2	2.00
14	GCA_014155825.1	Lacticaseibacillus paracasei	DPC 7150	SAMN12280511	2016-01-01	Ireland: Fermoy	-	204	0	0	2	2.00
15	GCA_009834405.1	Lacticaseibacillus paracasei	TD 062	SAMN12792675	2015-09-29	China:Tibeta	-	230	0	1	1	1.41
16	GCA_003712875.1	Lacticaseibacillus paracasei	FAM6165	SAMN04088892	-	Switzerland	-	259	0	0	2	2.00
17	GCA_000410395.1	Lacticaseibacillus paracasei subsp. paracasei Lpp41	Lpp41	SAMN02469724	1995	-	-	264	0	0	2	2.00
18	GCA_003346015.1	Lacticaseibacillus paracasei	KMB_623	SAMN09398955	2008	Slovakia	-	266	0	0	2	2.00
19	GCA_004368425.1	Lacticaseibacillus paracasei	INF 448	SAMN03290696	2000	Norway	-	267	0	0	2	2.00
20	GCA_003712395.1	Lacticaseibacillus paracasei	FAM18113	SAMN04088864	2003	Switzerland	-	282	0	0	2	2.00
21	GCA_003712685.1	Lacticaseibacillus paracasei	FAM22278	SAMN04088883	-	Switzerland	-	332	0	0	2	2.00
22	GCA_003712745.1	Lacticaseibacillus paracasei	FAM6012	SAMN04088890	-	Switzerland	-	351	0	0	2	2.00
23	GCA_016887805.1	Lacticaseibacillus paracasei	4186	SAMN17562095	2014-04-17	Italy	-	355	0	0	2	2.00
24	GCA_003712455.1	Lacticaseibacillus paracasei	FAM18132	SAMN04088871	2003	Switzerland	-	358	0	0	2	2.00
25	GCA_003712275.1	Lacticaseibacillus paracasei	FAM18105	SAMN04088861	2003	Switzerland	-	363	0	0	2	2.00
26	GCA_003712355.1	Lacticaseibacillus paracasei	FAM18101	SAMN04088860	2003	Switzerland	-	363	0	0	2	2.00
27	GCA_001191565.1	Lacticaseibacillus paracasei	CAUH35	SAMN03892742	2008-08	China: Xinjiang Uighur Autonomous Region	-	367	0	0	1	1.00
28	GCA_028878235.1	Lacticaseibacillus paracasei	M268	SAMN23708198	2012-01-30	Italy	-	371	0	0	2	2.00
29	GCA_003712725.1	Lacticaseibacillus paracasei	FAM22280	SAMN04088885	-	Switzerland	-	403	0	0	2	2.00
30	GCA_003712865.1	Lacticaseibacillus paracasei	FAM18157	SAMN04088874	2003	Switzerland	-	428	0	0	2	2.00
31	GCA_030361135.1	Lacticaseibacillus paracasei	TOM.264	SAMN35776884	2022-04	Russia: North Ossetia	-	438	0	0	2	2.00
32	GCA_030361345.1	Lacticaseibacillus paracasei	TOM.88	SAMN35776877	2022-04	Russia: Dagestan	-	438	0	0	2	2.00
33	GCA_041167765.1	Lacticaseibacillus paracasei	CHEE96	SAMN43028853	2024-07-12	South Korea	-	472	0	0	1	1.00
34	GCA_003346265.1	Lacticaseibacillus paracasei	KMB_616	SAMN09398948	2008	Slovakia	-	498	0	0	2	2.00
35	GCA_003712385.1	Lacticaseibacillus paracasei	FAM18119	SAMN04088865	2003	Switzerland	-	499	0	0	2	2.00
36	GCA_000309725.1	Lacticaseibacillus paracasei	UW1	SAMN02472003	-	USA: Wisconsin	-	540	0	0	2	2.00
37	GCA_003712345.1	Lacticaseibacillus paracasei	FAM18121	SAMN04088866	2003	Switzerland	-	567	0	0	2	2.00
38	GCA_003545945.1	Lacticaseibacillus paracasei	TJB4	SAMN09604022	2014-09-01	Tajikistan	-	610	0	0	2	2.00
39	GCA_039566245.1	Lacticaseibacillus paracasei	Z11	SAMN41162775	2022-10-11	Slovakia	-	639	0	0	2	2.00
40	GCA_039566565.1	Lacticaseibacillus paracasei	G185	SAMN41162749	2007	Slovakia	-	640	0	0	2	2.00
41	GCA_039566655.1	Lacticaseibacillus paracasei	G183	SAMN41162748	2007	Slovakia	-	640	0	0	2	2.00
42	GCA_000582665.1	Lacticaseibacillus paracasei N1115	N1115	SAMN03081525	-	China: Inner Mongolia	-	641	0	1	1	1.41
43	GCA_016887835.1	Lacticaseibacillus paracasei	2333	SAMN17562094	2011-09-29	Italy	-	641	0	0	2	2.00
44	GCA_003177075.1	Lacticaseibacillus paracasei	EG9	SAMN09239981	2012	Japan: Ibaraki	-	642	0	0	1	1.00
45	GCA_003712425.1	Lacticaseibacillus paracasei	FAM18124	SAMN04088868	2003	Switzerland	-	643	0	0	2	2.00
46	GCA_003712445.1	Lacticaseibacillus paracasei	FAM18129	SAMN04088870	2003	Switzerland	-	643	0	0	2	2.00
47	GCA_039566755.1	Lacticaseibacillus paracasei	Z34	SAMN41162779	2022-10-11	Slovakia	-	643	0	0	2	2.00
48	GCA_001514415.1	Lacticaseibacillus paracasei	KL1	SAMN04378089	2006-03	China:Jilin	-	644	0	0	1	1.00
49	GCA_003346025.1	Lacticaseibacillus paracasei	KMB_622	SAMN09398954	2008	Slovakia	-	644	0	0	2	2.00
50	GCA_032466015.1	Lacticaseibacillus paracasei	LMG 19719	SAMN37405140	1999	Denmark	-	645	0	0	1	1.00
51	GCA_025190825.1	Lacticaseibacillus paracasei	CIRM-BIA 2105	SAMN10365434	1993	Japan	-	646	0	0	2	2.00
52	GCA_030361225.1	Lacticaseibacillus paracasei	TOM.262	SAMN35776883	2022-04	Russia: North Ossetia	-	647	0	0	2	2.00
53	GCA_000409855.1	Lacticaseibacillus paracasei subsp. paracasei Lpp122	Lpp122	SAMN02469705	2003	-	-	649	0	0	2	2.00
54	GCA_047946965.1	Lacticaseibacillus paracasei	XM-38	SAMN30660290	2017-06-01	China:Inner Mongolia	-	649	0	0	1	1.00
55	GCA_003712925.1	Lacticaseibacillus paracasei	FAM18126	SAMN04088869	2003	Switzerland	-	650	0	0	2	2.00
56	GCA_028878255.1	Lacticaseibacillus paracasei	I2	SAMN23708201	2012-01-30	Italy	-	651	0	0	2	2.00
57	GCA_000159495.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	ATCC 25302	SAMN00001470	-	-	Homo sapiens	653	0	0	2	2.00
58	GCA_000829035.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00010723	-	-	-	653	0	0	1	1.00
59	GCA_001436385.1	Lacticaseibacillus paracasei subsp. paracasei ATCC 25302 = DSM 5622 = JCM 8130	DSM 5622	SAMN02369433	1989	-	-	653	0	0	2	2.00
60	GCA_004354655.1	Lacticaseibacillus paracasei subsp. paracasei	ATCC 25302	SAMN08555498	2017	Denmark	-	653	0	0	2	2.00
61	GCA_007989125.1	Lacticaseibacillus paracasei subsp. paracasei	-	SAMD00166241	-	-	-	653	0	0	2	2.00
62	GCA_013867595.1	Lacticaseibacillus paracasei	s-16	SAMN15579850	2020-07-20	-	-	653	0	0	2	2.00
63	GCA_000410255.1	Lacticaseibacillus paracasei subsp. paracasei Lpp7	Lpp7	SAMN02469713	1982	-	-	654	0	1	3	3.16
64	GCA_049532865.1	Lacticaseibacillus paracasei	PC-01	SAMN16552279	2007	China:Lhasa	-	655	0	0	1	1.00
65	GCA_039566645.1	Lacticaseibacillus paracasei	A191	SAMN41162755	2007	Slovakia	-	657	0	0	2	2.00
66	GCA_020992235.1	Lacticaseibacillus paracasei subsp. paracasei	VKM B-1144	SAMN23026586	1952	USA: Illinois	Homo sapiens	659	0	0	1	1.00
67	GCA_003712295.1	Lacticaseibacillus paracasei	FAM18099	SAMN04088859	2003	Switzerland	-	661	0	0	1	1.00
68	GCA_039566705.1	Lacticaseibacillus paracasei	G187	SAMN41162751	2007	Slovakia	-	662	0	0	2	2.00
69	GCA_000410375.1	Lacticaseibacillus paracasei subsp. paracasei Lpp71	Lpp71	SAMN02469712	1999	-	-	664	0	0	1	1.00
70	GCA_034555135.1	Lacticaseibacillus paracasei	BF3	SAMN38857134	2021	Spain:Galicia	Brachionus plicatilis	666	0	0	2	2.00
71	GCA_040267725.1	Lacticaseibacillus paracasei	TCI727	SAMN41829189	2020-05-01	Taiwan:Taipei	-	667	0	0	1	1.00
72	GCA_003712585.1	Lacticaseibacillus paracasei	FAM18172	SAMN04088876	2003	Switzerland	-	670	0	0	2	2.00
73	GCA_000410315.1	Lacticaseibacillus paracasei subsp. paracasei Lpp14	Lpp14	SAMN02469711	1989	-	-	671	0	0	2	2.00
74	GCA_035021805.1	Lacticaseibacillus paracasei	SRX10	SAMN38318108	2019	Greece: Attiki	-	671	0	0	2	2.00
75	GCA_044740695.1	Lacticaseibacillus paracasei	E11.5	SAMN44487087	-	Ethiopia	-	671	0	0	1	1.00
76	GCA_047785155.1	Lacticaseibacillus paracasei	SRCM212209	SAMN46082883	2020-10	South Korea:Sunchang	-	671	0	0	1	1.00
77	GCA_000410175.1	Lacticaseibacillus paracasei subsp. paracasei Lpp225	Lpp225	SAMN02469715	2009	-	-	672	0	0	2	2.00
78	GCA_000410275.1	Lacticaseibacillus paracasei subsp. paracasei CNCM I-4270	CNCM I-4270	SAMN02469729	2000	-	-	672	0	0	2	2.00
79	GCA_036762765.1	Lacticaseibacillus paracasei	1567_IL3212	SAMN37904769	-	-	animal	672	0	0	2	2.00
80	GCA_036762785.1	Lacticaseibacillus paracasei	1571-2_IL3211	SAMN37904772	-	-	animal	672	0	0	2	2.00
81	GCA_040822445.1	Lacticaseibacillus paracasei subsp. paracasei	BS2-PB5	SAMN42029631	2022-02-20	Indonesia: Tangerang	Homo sapiens	672	0	0	1	1.00
82	GCA_015476155.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0625	SAMN16668564	-	South Korea	-	673	0	0	1	1.00
83	GCA_018257175.1	Lacticaseibacillus paracasei	Dm-2019-60	SAMN17146146	2019	USA: Ithaca, NY	Drosophila melanogaster	673	0	0	2	2.00
84	GCA_025137495.1	Lacticaseibacillus paracasei	L1	SAMN20355457	2015-10-10	China:Jinzhou	-	673	0	0	1	1.00
85	GCA_046116425.1	Lacticaseibacillus paracasei	M115-8W-2	SAMN38225291	2022	Taiwan	Homo sapiens	673	0	0	1	1.00
86	GCA_018729425.1	Lacticaseibacillus paracasei	MYD3	SAMN16551136	2017	Indonesia: Yogyakarta	-	674	0	0	2	2.00
87	GCA_033815995.1	Lacticaseibacillus paracasei	YE01	SAMN37887709	-	China	-	674	0	0	1	1.00
88	GCA_010363715.1	Lacticaseibacillus paracasei	D10-4	SAMN13943411	2018-01-10	USA	Homo sapiens	675	0	0	2	2.00
89	GCA_014905075.1	Lacticaseibacillus paracasei	NFFJ04	SAMN14444968	2018-11	South Korea: Sangju	-	675	0	0	1	1.00
90	GCA_024125225.1	Lacticaseibacillus paracasei	NB2B-AER-MRS-02	SAMN28102056	2016-04	-	Homo sapiens	675	0	0	1	1.00
91	GCA_028321965.1	Lacticaseibacillus paracasei	1001216st1_C7_1001216I_160404	SAMN31322631	2016-04-04	USA	Homo sapiens	675	0	0	2	2.00
92	GCA_028322025.1	Lacticaseibacillus paracasei	1001216st1_H7_1001713B170131_170501	SAMN31322633	2017-05-01	USA	Homo sapiens	675	0	0	2	2.00
93	GCA_028322845.1	Lacticaseibacillus paracasei	1001216st1_D9_D55t1_190419	SAMN31322632	2019-04-19	USA	Homo sapiens	675	0	0	2	2.00
94	GCA_028322955.1	Lacticaseibacillus paracasei	1001216st1_B6_D55t1_190419	SAMN31322630	2019-04-19	USA	Homo sapiens	675	0	0	2	2.00
95	GCA_040093155.1	Lacticaseibacillus paracasei	CLA-AA-H40	SAMN40631522	2019-07-25	Germany:Aachen	Homo sapiens	675	0	0	2	2.00
96	GCA_015476075.1	Lacticaseibacillus paracasei subsp. tolerans	MGB0245	SAMN16657550	-	South Korea	-	676	0	0	1	1.00
97	GCA_025190685.1	Lacticaseibacillus paracasei	CIRM-BIA 1445	SAMN10365442	1996	France	-	676	0	0	2	2.00
98	GCA_031348425.1	Lacticaseibacillus paracasei	KCKM 0245	SAMN37235621	2016-07-08	South Korea	-	676	0	0	1	1.00
99	GCA_031461095.1	Lacticaseibacillus paracasei	KCKM 0992	SAMN37256209	2015	South Korea	-	676	0	0	1	1.00
100	GCA_003712645.1	Lacticaseibacillus paracasei	FAM22276	SAMN04088881	1990	Switzerland	-	677	0	0	2	2.00