GCA_023668085.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaLNBFFKHB_18 (original name was: gnl|Prokka|LNBFFKHB_18)

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	RRE-containing	67,658	78,149

gnlProkkaLNBFFKHB_73 (original name was: gnl|Prokka|LNBFFKHB_73)

Region	Type	From	To	Most similar known cluster		Similarity
Region 62.1	arylpolyene	113,819	161,424	flexirubin	Other	48%

Region	Type	From	To	Most similar known cluster	Similarity
Region 18.1	RRE-containing	67,658	78,149
Region 62.1	arylpolyene	113,819	161,424	flexirubin	Other	48%

No secondary metabolite regions were found in these records:: gnlProkkaLNBFFKHB_1 (original name was: gnl|Prokka|LNBFFKHB_1); gnlProkkaLNBFFKHB_2 (original name was: gnl|Prokka|LNBFFKHB_2); gnlProkkaLNBFFKHB_3 (original name was: gnl|Prokka|LNBFFKHB_3); gnlProkkaLNBFFKHB_4 (original name was: gnl|Prokka|LNBFFKHB_4); gnlProkkaLNBFFKHB_5 (original name was: gnl|Prokka|LNBFFKHB_5); gnlProkkaLNBFFKHB_6 (original name was: gnl|Prokka|LNBFFKHB_6); gnlProkkaLNBFFKHB_7 (original name was: gnl|Prokka|LNBFFKHB_7); gnlProkkaLNBFFKHB_8 (original name was: gnl|Prokka|LNBFFKHB_8); gnlProkkaLNBFFKHB_9 (original name was: gnl|Prokka|LNBFFKHB_9); gnlProkkaLNBFFKHB_10 (original name was: gnl|Prokka|LNBFFKHB_10); gnlProkkaLNBFFKHB_11 (original name was: gnl|Prokka|LNBFFKHB_11); gnlProkkaLNBFFKHB_12 (original name was: gnl|Prokka|LNBFFKHB_12); gnlProkkaLNBFFKHB_13 (original name was: gnl|Prokka|LNBFFKHB_13); gnlProkkaLNBFFKHB_14 (original name was: gnl|Prokka|LNBFFKHB_14); gnlProkkaLNBFFKHB_15 (original name was: gnl|Prokka|LNBFFKHB_15); gnlProkkaLNBFFKHB_16 (original name was: gnl|Prokka|LNBFFKHB_16); gnlProkkaLNBFFKHB_17 (original name was: gnl|Prokka|LNBFFKHB_17); gnlProkkaLNBFFKHB_19 (original name was: gnl|Prokka|LNBFFKHB_19); gnlProkkaLNBFFKHB_20 (original name was: gnl|Prokka|LNBFFKHB_20); gnlProkkaLNBFFKHB_21 (original name was: gnl|Prokka|LNBFFKHB_21); gnlProkkaLNBFFKHB_22 (original name was: gnl|Prokka|LNBFFKHB_22); gnlProkkaLNBFFKHB_23 (original name was: gnl|Prokka|LNBFFKHB_23); gnlProkkaLNBFFKHB_24 (original name was: gnl|Prokka|LNBFFKHB_24); gnlProkkaLNBFFKHB_25 (original name was: gnl|Prokka|LNBFFKHB_25); gnlProkkaLNBFFKHB_26 (original name was: gnl|Prokka|LNBFFKHB_26); gnlProkkaLNBFFKHB_27 (original name was: gnl|Prokka|LNBFFKHB_27); gnlProkkaLNBFFKHB_28 (original name was: gnl|Prokka|LNBFFKHB_28); gnlProkkaLNBFFKHB_29 (original name was: gnl|Prokka|LNBFFKHB_29); gnlProkkaLNBFFKHB_30 (original name was: gnl|Prokka|LNBFFKHB_30); gnlProkkaLNBFFKHB_31 (original name was: gnl|Prokka|LNBFFKHB_31); gnlProkkaLNBFFKHB_32 (original name was: gnl|Prokka|LNBFFKHB_32); gnlProkkaLNBFFKHB_33 (original name was: gnl|Prokka|LNBFFKHB_33); gnlProkkaLNBFFKHB_34 (original name was: gnl|Prokka|LNBFFKHB_34); gnlProkkaLNBFFKHB_35 (original name was: gnl|Prokka|LNBFFKHB_35); gnlProkkaLNBFFKHB_36 (original name was: gnl|Prokka|LNBFFKHB_36); gnlProkkaLNBFFKHB_37 (original name was: gnl|Prokka|LNBFFKHB_37); gnlProkkaLNBFFKHB_38 (original name was: gnl|Prokka|LNBFFKHB_38); gnlProkkaLNBFFKHB_39 (original name was: gnl|Prokka|LNBFFKHB_39); gnlProkkaLNBFFKHB_40 (original name was: gnl|Prokka|LNBFFKHB_40); gnlProkkaLNBFFKHB_41 (original name was: gnl|Prokka|LNBFFKHB_41); gnlProkkaLNBFFKHB_42 (original name was: gnl|Prokka|LNBFFKHB_42); gnlProkkaLNBFFKHB_43 (original name was: gnl|Prokka|LNBFFKHB_43); gnlProkkaLNBFFKHB_44 (original name was: gnl|Prokka|LNBFFKHB_44); gnlProkkaLNBFFKHB_45 (original name was: gnl|Prokka|LNBFFKHB_45); gnlProkkaLNBFFKHB_46 (original name was: gnl|Prokka|LNBFFKHB_46); gnlProkkaLNBFFKHB_47 (original name was: gnl|Prokka|LNBFFKHB_47); gnlProkkaLNBFFKHB_48 (original name was: gnl|Prokka|LNBFFKHB_48); gnlProkkaLNBFFKHB_49 (original name was: gnl|Prokka|LNBFFKHB_49); gnlProkkaLNBFFKHB_50 (original name was: gnl|Prokka|LNBFFKHB_50); gnlProkkaLNBFFKHB_51 (original name was: gnl|Prokka|LNBFFKHB_51); gnlProkkaLNBFFKHB_52 (original name was: gnl|Prokka|LNBFFKHB_52); gnlProkkaLNBFFKHB_53 (original name was: gnl|Prokka|LNBFFKHB_53); gnlProkkaLNBFFKHB_54 (original name was: gnl|Prokka|LNBFFKHB_54); gnlProkkaLNBFFKHB_55 (original name was: gnl|Prokka|LNBFFKHB_55); gnlProkkaLNBFFKHB_56 (original name was: gnl|Prokka|LNBFFKHB_56); gnlProkkaLNBFFKHB_57 (original name was: gnl|Prokka|LNBFFKHB_57); gnlProkkaLNBFFKHB_58 (original name was: gnl|Prokka|LNBFFKHB_58); gnlProkkaLNBFFKHB_59 (original name was: gnl|Prokka|LNBFFKHB_59); gnlProkkaLNBFFKHB_66 (original name was: gnl|Prokka|LNBFFKHB_66); gnlProkkaLNBFFKHB_72 (original name was: gnl|Prokka|LNBFFKHB_72); gnlProkkaLNBFFKHB_74 (original name was: gnl|Prokka|LNBFFKHB_74)

Compact view

gnlProkkaLNBFFKHB_18 - Region 1 - RRE-containing

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Location: 67,658 - 78,149 nt. (total: 10,492 nt) Show pHMM detection rules used

Region on contig edge.

RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaLNBFFKHB_73 - Region 1 - arylpolyene

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Location: 113,819 - 161,424 nt. (total: 47,606 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

NRPS/PKS domains

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters from MIBiG 3.1

NRPS/PKS substrates

NRPS/PKS substrate predictions

ctg62_119

AMP-binding (46..308): X

nrpys: Asp, Asn, Glu, Gln, Aad

SVM prediction details:

Predicted physicochemical class:: N/A
Large clusters prediction:: Aliphatic chain with H-bond donor (Asp, Asn, Glu, Gln, Aad)
Small clusters prediction:: N/A
Single AA prediction:: N/A

Stachelhaus prediction details:

Stachelhaus sequence:: YMRMIITSSK
Nearest Stachelhaus code(s):
Stachelhaus code match:: 0% (weak)