GCA_023702905.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaGFCPKPKP_6 (original name was: gnl|Prokka|GFCPKPKP_6)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	1	8,185	plantaricyclin	RiPP	100%

gnlProkkaGFCPKPKP_72 (original name was: gnl|Prokka|GFCPKPKP_72)

Region	Type	From	To
Region 33.1	T3PKS	638,072	679,241
Region 33.2	terpene	2,003,360	2,024,241
Region 33.3	cyclic-lactone-autoinducer	2,269,929	2,290,634
Region 33.4	RiPP-like	2,769,954	2,782,104

No secondary metabolite regions were found in these records:: gnlProkkaGFCPKPKP_1 (original name was: gnl|Prokka|GFCPKPKP_1); gnlProkkaGFCPKPKP_7 (original name was: gnl|Prokka|GFCPKPKP_7); gnlProkkaGFCPKPKP_8 (original name was: gnl|Prokka|GFCPKPKP_8); gnlProkkaGFCPKPKP_9 (original name was: gnl|Prokka|GFCPKPKP_9); gnlProkkaGFCPKPKP_10 (original name was: gnl|Prokka|GFCPKPKP_10); gnlProkkaGFCPKPKP_11 (original name was: gnl|Prokka|GFCPKPKP_11); gnlProkkaGFCPKPKP_12 (original name was: gnl|Prokka|GFCPKPKP_12); gnlProkkaGFCPKPKP_28 (original name was: gnl|Prokka|GFCPKPKP_28); gnlProkkaGFCPKPKP_29 (original name was: gnl|Prokka|GFCPKPKP_29); gnlProkkaGFCPKPKP_30 (original name was: gnl|Prokka|GFCPKPKP_30); gnlProkkaGFCPKPKP_31 (original name was: gnl|Prokka|GFCPKPKP_31); gnlProkkaGFCPKPKP_32 (original name was: gnl|Prokka|GFCPKPKP_32); gnlProkkaGFCPKPKP_33 (original name was: gnl|Prokka|GFCPKPKP_33); gnlProkkaGFCPKPKP_34 (original name was: gnl|Prokka|GFCPKPKP_34); gnlProkkaGFCPKPKP_35 (original name was: gnl|Prokka|GFCPKPKP_35); gnlProkkaGFCPKPKP_36 (original name was: gnl|Prokka|GFCPKPKP_36); gnlProkkaGFCPKPKP_39 (original name was: gnl|Prokka|GFCPKPKP_39); gnlProkkaGFCPKPKP_45 (original name was: gnl|Prokka|GFCPKPKP_45); gnlProkkaGFCPKPKP_46 (original name was: gnl|Prokka|GFCPKPKP_46); gnlProkkaGFCPKPKP_47 (original name was: gnl|Prokka|GFCPKPKP_47); gnlProkkaGFCPKPKP_48 (original name was: gnl|Prokka|GFCPKPKP_48); gnlProkkaGFCPKPKP_49 (original name was: gnl|Prokka|GFCPKPKP_49); gnlProkkaGFCPKPKP_50 (original name was: gnl|Prokka|GFCPKPKP_50); gnlProkkaGFCPKPKP_51 (original name was: gnl|Prokka|GFCPKPKP_51); gnlProkkaGFCPKPKP_59 (original name was: gnl|Prokka|GFCPKPKP_59); gnlProkkaGFCPKPKP_60 (original name was: gnl|Prokka|GFCPKPKP_60); gnlProkkaGFCPKPKP_61 (original name was: gnl|Prokka|GFCPKPKP_61); gnlProkkaGFCPKPKP_62 (original name was: gnl|Prokka|GFCPKPKP_62); gnlProkkaGFCPKPKP_63 (original name was: gnl|Prokka|GFCPKPKP_63); gnlProkkaGFCPKPKP_64 (original name was: gnl|Prokka|GFCPKPKP_64); gnlProkkaGFCPKPKP_70 (original name was: gnl|Prokka|GFCPKPKP_70); gnlProkkaGFCPKPKP_73 (original name was: gnl|Prokka|GFCPKPKP_73); gnlProkkaGFCPKPKP_74 (original name was: gnl|Prokka|GFCPKPKP_74); gnlProkkaGFCPKPKP_75 (original name was: gnl|Prokka|GFCPKPKP_75); gnlProkkaGFCPKPKP_76 (original name was: gnl|Prokka|GFCPKPKP_76); gnlProkkaGFCPKPKP_77 (original name was: gnl|Prokka|GFCPKPKP_77); gnlProkkaGFCPKPKP_78 (original name was: gnl|Prokka|GFCPKPKP_78); gnlProkkaGFCPKPKP_80 (original name was: gnl|Prokka|GFCPKPKP_80); gnlProkkaGFCPKPKP_81 (original name was: gnl|Prokka|GFCPKPKP_81); gnlProkkaGFCPKPKP_82 (original name was: gnl|Prokka|GFCPKPKP_82); gnlProkkaGFCPKPKP_84 (original name was: gnl|Prokka|GFCPKPKP_84); gnlProkkaGFCPKPKP_85 (original name was: gnl|Prokka|GFCPKPKP_85); gnlProkkaGFCPKPKP_86 (original name was: gnl|Prokka|GFCPKPKP_86); gnlProkkaGFCPKPKP_97 (original name was: gnl|Prokka|GFCPKPKP_97); gnlProkkaGFCPKPKP_98 (original name was: gnl|Prokka|GFCPKPKP_98); gnlProkkaGFCPKPKP_99 (original name was: gnl|Prokka|GFCPKPKP_99); gnlProkkaGFCPKPKP_100 (original name was: gnl|Prokka|GFCPKPKP_100); gnlProkkaGFCPKPKP_101 (original name was: gnl|Prokka|GFCPKPKP_101); gnlProkkaGFCPKPKP_102 (original name was: gnl|Prokka|GFCPKPKP_102); gnlProkkaGFCPKPKP_103 (original name was: gnl|Prokka|GFCPKPKP_103); gnlProkkaGFCPKPKP_104 (original name was: gnl|Prokka|GFCPKPKP_104); gnlProkkaGFCPKPKP_106 (original name was: gnl|Prokka|GFCPKPKP_106); gnlProkkaGFCPKPKP_108 (original name was: gnl|Prokka|GFCPKPKP_108); gnlProkkaGFCPKPKP_109 (original name was: gnl|Prokka|GFCPKPKP_109); gnlProkkaGFCPKPKP_110 (original name was: gnl|Prokka|GFCPKPKP_110); gnlProkkaGFCPKPKP_111 (original name was: gnl|Prokka|GFCPKPKP_111); gnlProkkaGFCPKPKP_112 (original name was: gnl|Prokka|GFCPKPKP_112)

Compact view

gnlProkkaGFCPKPKP_6 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 8,185 nt. (total: 8,185 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaGFCPKPKP_72 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 638,072 - 679,241 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGFCPKPKP_72 - Region 2 - terpene

Download region GenBank file

Download region SVG

Location: 2,003,360 - 2,024,241 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGFCPKPKP_72 - Region 3 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 2,269,929 - 2,290,634 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaGFCPKPKP_72 - Region 4 - RiPP-like

Download region GenBank file

Download region SVG

Location: 2,769,954 - 2,782,104 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.