GCA_023702925.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFMBCDIAA_41 (original name was: gnl|Prokka|FMBCDIAA_41)

Region	Type	From	To
Region 24.1	T3PKS	724,298	765,467
Region 24.2	RiPP-like	1,718,977	1,731,127
Region 24.3	cyclic-lactone-autoinducer	2,210,345	2,231,050
Region 24.4	terpene	2,476,848	2,497,729

gnlProkkaFMBCDIAA_60 (original name was: gnl|Prokka|FMBCDIAA_60)

Region	Type	From	To	Most similar known cluster		Similarity
Region 26.1	RiPP-like	1	5,913	plantaricyclin	RiPP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 24.1	T3PKS	724,298	765,467
Region 24.2	RiPP-like	1,718,977	1,731,127
Region 24.3	cyclic-lactone-autoinducer	2,210,345	2,231,050
Region 24.4	terpene	2,476,848	2,497,729
Region 26.1	RiPP-like	1	5,913	plantaricyclin	RiPP	100%

No secondary metabolite regions were found in these records:: gnlProkkaFMBCDIAA_1 (original name was: gnl|Prokka|FMBCDIAA_1); gnlProkkaFMBCDIAA_2 (original name was: gnl|Prokka|FMBCDIAA_2); gnlProkkaFMBCDIAA_5 (original name was: gnl|Prokka|FMBCDIAA_5); gnlProkkaFMBCDIAA_6 (original name was: gnl|Prokka|FMBCDIAA_6); gnlProkkaFMBCDIAA_7 (original name was: gnl|Prokka|FMBCDIAA_7); gnlProkkaFMBCDIAA_8 (original name was: gnl|Prokka|FMBCDIAA_8); gnlProkkaFMBCDIAA_9 (original name was: gnl|Prokka|FMBCDIAA_9); gnlProkkaFMBCDIAA_10 (original name was: gnl|Prokka|FMBCDIAA_10); gnlProkkaFMBCDIAA_11 (original name was: gnl|Prokka|FMBCDIAA_11); gnlProkkaFMBCDIAA_19 (original name was: gnl|Prokka|FMBCDIAA_19); gnlProkkaFMBCDIAA_20 (original name was: gnl|Prokka|FMBCDIAA_20); gnlProkkaFMBCDIAA_21 (original name was: gnl|Prokka|FMBCDIAA_21); gnlProkkaFMBCDIAA_22 (original name was: gnl|Prokka|FMBCDIAA_22); gnlProkkaFMBCDIAA_23 (original name was: gnl|Prokka|FMBCDIAA_23); gnlProkkaFMBCDIAA_24 (original name was: gnl|Prokka|FMBCDIAA_24); gnlProkkaFMBCDIAA_25 (original name was: gnl|Prokka|FMBCDIAA_25); gnlProkkaFMBCDIAA_26 (original name was: gnl|Prokka|FMBCDIAA_26); gnlProkkaFMBCDIAA_29 (original name was: gnl|Prokka|FMBCDIAA_29); gnlProkkaFMBCDIAA_30 (original name was: gnl|Prokka|FMBCDIAA_30); gnlProkkaFMBCDIAA_31 (original name was: gnl|Prokka|FMBCDIAA_31); gnlProkkaFMBCDIAA_32 (original name was: gnl|Prokka|FMBCDIAA_32); gnlProkkaFMBCDIAA_33 (original name was: gnl|Prokka|FMBCDIAA_33); gnlProkkaFMBCDIAA_34 (original name was: gnl|Prokka|FMBCDIAA_34); gnlProkkaFMBCDIAA_52 (original name was: gnl|Prokka|FMBCDIAA_52); gnlProkkaFMBCDIAA_62 (original name was: gnl|Prokka|FMBCDIAA_62); gnlProkkaFMBCDIAA_63 (original name was: gnl|Prokka|FMBCDIAA_63); gnlProkkaFMBCDIAA_64 (original name was: gnl|Prokka|FMBCDIAA_64); gnlProkkaFMBCDIAA_65 (original name was: gnl|Prokka|FMBCDIAA_65); gnlProkkaFMBCDIAA_68 (original name was: gnl|Prokka|FMBCDIAA_68); gnlProkkaFMBCDIAA_69 (original name was: gnl|Prokka|FMBCDIAA_69); gnlProkkaFMBCDIAA_70 (original name was: gnl|Prokka|FMBCDIAA_70); gnlProkkaFMBCDIAA_71 (original name was: gnl|Prokka|FMBCDIAA_71); gnlProkkaFMBCDIAA_72 (original name was: gnl|Prokka|FMBCDIAA_72); gnlProkkaFMBCDIAA_73 (original name was: gnl|Prokka|FMBCDIAA_73); gnlProkkaFMBCDIAA_74 (original name was: gnl|Prokka|FMBCDIAA_74); gnlProkkaFMBCDIAA_75 (original name was: gnl|Prokka|FMBCDIAA_75); gnlProkkaFMBCDIAA_78 (original name was: gnl|Prokka|FMBCDIAA_78); gnlProkkaFMBCDIAA_79 (original name was: gnl|Prokka|FMBCDIAA_79); gnlProkkaFMBCDIAA_80 (original name was: gnl|Prokka|FMBCDIAA_80); gnlProkkaFMBCDIAA_81 (original name was: gnl|Prokka|FMBCDIAA_81); gnlProkkaFMBCDIAA_82 (original name was: gnl|Prokka|FMBCDIAA_82); gnlProkkaFMBCDIAA_83 (original name was: gnl|Prokka|FMBCDIAA_83); gnlProkkaFMBCDIAA_84 (original name was: gnl|Prokka|FMBCDIAA_84); gnlProkkaFMBCDIAA_85 (original name was: gnl|Prokka|FMBCDIAA_85); gnlProkkaFMBCDIAA_86 (original name was: gnl|Prokka|FMBCDIAA_86); gnlProkkaFMBCDIAA_87 (original name was: gnl|Prokka|FMBCDIAA_87); gnlProkkaFMBCDIAA_88 (original name was: gnl|Prokka|FMBCDIAA_88); gnlProkkaFMBCDIAA_89 (original name was: gnl|Prokka|FMBCDIAA_89); gnlProkkaFMBCDIAA_90 (original name was: gnl|Prokka|FMBCDIAA_90); gnlProkkaFMBCDIAA_95 (original name was: gnl|Prokka|FMBCDIAA_95); gnlProkkaFMBCDIAA_96 (original name was: gnl|Prokka|FMBCDIAA_96); gnlProkkaFMBCDIAA_97 (original name was: gnl|Prokka|FMBCDIAA_97); gnlProkkaFMBCDIAA_98 (original name was: gnl|Prokka|FMBCDIAA_98); gnlProkkaFMBCDIAA_99 (original name was: gnl|Prokka|FMBCDIAA_99); gnlProkkaFMBCDIAA_100 (original name was: gnl|Prokka|FMBCDIAA_100); gnlProkkaFMBCDIAA_101 (original name was: gnl|Prokka|FMBCDIAA_101)

Compact view

gnlProkkaFMBCDIAA_41 - Region 1 - T3PKS

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Location: 724,298 - 765,467 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFMBCDIAA_41 - Region 2 - RiPP-like

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Location: 1,718,977 - 1,731,127 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFMBCDIAA_41 - Region 3 - cyclic-lactone-autoinducer

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Location: 2,210,345 - 2,231,050 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFMBCDIAA_41 - Region 4 - terpene

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Location: 2,476,848 - 2,497,729 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFMBCDIAA_60 - Region 1 - RiPP-like

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Location: 1 - 5,913 nt. (total: 5,913 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1