GCA_023702985.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaFMJMGFLH_1 (original name was: gnl|Prokka|FMJMGFLH_1)

Region	Type	From	To
Region 1.1	T3PKS	649,620	690,789
Region 1.2	RiPP-like	1,667,380	1,679,530
Region 1.3	cyclic-lactone-autoinducer	2,158,548	2,179,253
Region 1.4	terpene	2,423,601	2,444,482

gnlProkkaFMJMGFLH_68 (original name was: gnl|Prokka|FMJMGFLH_68)

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	RiPP-like	11,817	20,085	plantaricyclin	RiPP	100%

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T3PKS	649,620	690,789
Region 1.2	RiPP-like	1,667,380	1,679,530
Region 1.3	cyclic-lactone-autoinducer	2,158,548	2,179,253
Region 1.4	terpene	2,423,601	2,444,482
Region 43.1	RiPP-like	11,817	20,085	plantaricyclin	RiPP	100%

No secondary metabolite regions were found in these records:: gnlProkkaFMJMGFLH_7 (original name was: gnl|Prokka|FMJMGFLH_7); gnlProkkaFMJMGFLH_8 (original name was: gnl|Prokka|FMJMGFLH_8); gnlProkkaFMJMGFLH_9 (original name was: gnl|Prokka|FMJMGFLH_9); gnlProkkaFMJMGFLH_10 (original name was: gnl|Prokka|FMJMGFLH_10); gnlProkkaFMJMGFLH_11 (original name was: gnl|Prokka|FMJMGFLH_11); gnlProkkaFMJMGFLH_12 (original name was: gnl|Prokka|FMJMGFLH_12); gnlProkkaFMJMGFLH_13 (original name was: gnl|Prokka|FMJMGFLH_13); gnlProkkaFMJMGFLH_14 (original name was: gnl|Prokka|FMJMGFLH_14); gnlProkkaFMJMGFLH_15 (original name was: gnl|Prokka|FMJMGFLH_15); gnlProkkaFMJMGFLH_16 (original name was: gnl|Prokka|FMJMGFLH_16); gnlProkkaFMJMGFLH_17 (original name was: gnl|Prokka|FMJMGFLH_17); gnlProkkaFMJMGFLH_18 (original name was: gnl|Prokka|FMJMGFLH_18); gnlProkkaFMJMGFLH_19 (original name was: gnl|Prokka|FMJMGFLH_19); gnlProkkaFMJMGFLH_20 (original name was: gnl|Prokka|FMJMGFLH_20); gnlProkkaFMJMGFLH_23 (original name was: gnl|Prokka|FMJMGFLH_23); gnlProkkaFMJMGFLH_25 (original name was: gnl|Prokka|FMJMGFLH_25); gnlProkkaFMJMGFLH_26 (original name was: gnl|Prokka|FMJMGFLH_26); gnlProkkaFMJMGFLH_27 (original name was: gnl|Prokka|FMJMGFLH_27); gnlProkkaFMJMGFLH_28 (original name was: gnl|Prokka|FMJMGFLH_28); gnlProkkaFMJMGFLH_29 (original name was: gnl|Prokka|FMJMGFLH_29); gnlProkkaFMJMGFLH_30 (original name was: gnl|Prokka|FMJMGFLH_30); gnlProkkaFMJMGFLH_31 (original name was: gnl|Prokka|FMJMGFLH_31); gnlProkkaFMJMGFLH_32 (original name was: gnl|Prokka|FMJMGFLH_32); gnlProkkaFMJMGFLH_33 (original name was: gnl|Prokka|FMJMGFLH_33); gnlProkkaFMJMGFLH_34 (original name was: gnl|Prokka|FMJMGFLH_34); gnlProkkaFMJMGFLH_37 (original name was: gnl|Prokka|FMJMGFLH_37); gnlProkkaFMJMGFLH_38 (original name was: gnl|Prokka|FMJMGFLH_38); gnlProkkaFMJMGFLH_39 (original name was: gnl|Prokka|FMJMGFLH_39); gnlProkkaFMJMGFLH_40 (original name was: gnl|Prokka|FMJMGFLH_40); gnlProkkaFMJMGFLH_41 (original name was: gnl|Prokka|FMJMGFLH_41); gnlProkkaFMJMGFLH_42 (original name was: gnl|Prokka|FMJMGFLH_42); gnlProkkaFMJMGFLH_45 (original name was: gnl|Prokka|FMJMGFLH_45); gnlProkkaFMJMGFLH_50 (original name was: gnl|Prokka|FMJMGFLH_50); gnlProkkaFMJMGFLH_51 (original name was: gnl|Prokka|FMJMGFLH_51); gnlProkkaFMJMGFLH_52 (original name was: gnl|Prokka|FMJMGFLH_52); gnlProkkaFMJMGFLH_53 (original name was: gnl|Prokka|FMJMGFLH_53); gnlProkkaFMJMGFLH_54 (original name was: gnl|Prokka|FMJMGFLH_54); gnlProkkaFMJMGFLH_55 (original name was: gnl|Prokka|FMJMGFLH_55); gnlProkkaFMJMGFLH_56 (original name was: gnl|Prokka|FMJMGFLH_56); gnlProkkaFMJMGFLH_57 (original name was: gnl|Prokka|FMJMGFLH_57); gnlProkkaFMJMGFLH_67 (original name was: gnl|Prokka|FMJMGFLH_67); gnlProkkaFMJMGFLH_69 (original name was: gnl|Prokka|FMJMGFLH_69); gnlProkkaFMJMGFLH_70 (original name was: gnl|Prokka|FMJMGFLH_70); gnlProkkaFMJMGFLH_71 (original name was: gnl|Prokka|FMJMGFLH_71); gnlProkkaFMJMGFLH_72 (original name was: gnl|Prokka|FMJMGFLH_72); gnlProkkaFMJMGFLH_73 (original name was: gnl|Prokka|FMJMGFLH_73); gnlProkkaFMJMGFLH_74 (original name was: gnl|Prokka|FMJMGFLH_74); gnlProkkaFMJMGFLH_75 (original name was: gnl|Prokka|FMJMGFLH_75); gnlProkkaFMJMGFLH_76 (original name was: gnl|Prokka|FMJMGFLH_76); gnlProkkaFMJMGFLH_78 (original name was: gnl|Prokka|FMJMGFLH_78); gnlProkkaFMJMGFLH_81 (original name was: gnl|Prokka|FMJMGFLH_81); gnlProkkaFMJMGFLH_82 (original name was: gnl|Prokka|FMJMGFLH_82); gnlProkkaFMJMGFLH_83 (original name was: gnl|Prokka|FMJMGFLH_83); gnlProkkaFMJMGFLH_89 (original name was: gnl|Prokka|FMJMGFLH_89)

Compact view

gnlProkkaFMJMGFLH_1 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 649,620 - 690,789 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFMJMGFLH_1 - Region 2 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1,667,380 - 1,679,530 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFMJMGFLH_1 - Region 3 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 2,158,548 - 2,179,253 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFMJMGFLH_1 - Region 4 - terpene

Download region GenBank file

Download region SVG

Location: 2,423,601 - 2,444,482 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaFMJMGFLH_68 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 11,817 - 20,085 nt. (total: 8,269 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1