GCA_023703015.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaEEDJKDBP_11 (original name was: gnl|Prokka|EEDJKDBP_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	2,201	12,476	plantaricyclin	RiPP	100%

gnlProkkaEEDJKDBP_28 (original name was: gnl|Prokka|EEDJKDBP_28)

Region	Type	From	To
Region 17.1	terpene	57,180	78,061
Region 17.2	cyclic-lactone-autoinducer	336,631	357,336
Region 17.3	RiPP-like	822,756	834,906
Region 17.4	T3PKS	1,838,656	1,879,825

No secondary metabolite regions were found in these records:: gnlProkkaEEDJKDBP_1 (original name was: gnl|Prokka|EEDJKDBP_1); gnlProkkaEEDJKDBP_2 (original name was: gnl|Prokka|EEDJKDBP_2); gnlProkkaEEDJKDBP_5 (original name was: gnl|Prokka|EEDJKDBP_5); gnlProkkaEEDJKDBP_6 (original name was: gnl|Prokka|EEDJKDBP_6); gnlProkkaEEDJKDBP_7 (original name was: gnl|Prokka|EEDJKDBP_7); gnlProkkaEEDJKDBP_8 (original name was: gnl|Prokka|EEDJKDBP_8); gnlProkkaEEDJKDBP_9 (original name was: gnl|Prokka|EEDJKDBP_9); gnlProkkaEEDJKDBP_10 (original name was: gnl|Prokka|EEDJKDBP_10); gnlProkkaEEDJKDBP_12 (original name was: gnl|Prokka|EEDJKDBP_12); gnlProkkaEEDJKDBP_14 (original name was: gnl|Prokka|EEDJKDBP_14); gnlProkkaEEDJKDBP_15 (original name was: gnl|Prokka|EEDJKDBP_15); gnlProkkaEEDJKDBP_16 (original name was: gnl|Prokka|EEDJKDBP_16); gnlProkkaEEDJKDBP_17 (original name was: gnl|Prokka|EEDJKDBP_17); gnlProkkaEEDJKDBP_18 (original name was: gnl|Prokka|EEDJKDBP_18); gnlProkkaEEDJKDBP_19 (original name was: gnl|Prokka|EEDJKDBP_19); gnlProkkaEEDJKDBP_29 (original name was: gnl|Prokka|EEDJKDBP_29); gnlProkkaEEDJKDBP_30 (original name was: gnl|Prokka|EEDJKDBP_30); gnlProkkaEEDJKDBP_31 (original name was: gnl|Prokka|EEDJKDBP_31); gnlProkkaEEDJKDBP_32 (original name was: gnl|Prokka|EEDJKDBP_32); gnlProkkaEEDJKDBP_33 (original name was: gnl|Prokka|EEDJKDBP_33); gnlProkkaEEDJKDBP_39 (original name was: gnl|Prokka|EEDJKDBP_39); gnlProkkaEEDJKDBP_41 (original name was: gnl|Prokka|EEDJKDBP_41); gnlProkkaEEDJKDBP_42 (original name was: gnl|Prokka|EEDJKDBP_42); gnlProkkaEEDJKDBP_43 (original name was: gnl|Prokka|EEDJKDBP_43); gnlProkkaEEDJKDBP_44 (original name was: gnl|Prokka|EEDJKDBP_44); gnlProkkaEEDJKDBP_45 (original name was: gnl|Prokka|EEDJKDBP_45); gnlProkkaEEDJKDBP_50 (original name was: gnl|Prokka|EEDJKDBP_50); gnlProkkaEEDJKDBP_61 (original name was: gnl|Prokka|EEDJKDBP_61); gnlProkkaEEDJKDBP_64 (original name was: gnl|Prokka|EEDJKDBP_64); gnlProkkaEEDJKDBP_65 (original name was: gnl|Prokka|EEDJKDBP_65); gnlProkkaEEDJKDBP_66 (original name was: gnl|Prokka|EEDJKDBP_66); gnlProkkaEEDJKDBP_67 (original name was: gnl|Prokka|EEDJKDBP_67); gnlProkkaEEDJKDBP_68 (original name was: gnl|Prokka|EEDJKDBP_68); gnlProkkaEEDJKDBP_72 (original name was: gnl|Prokka|EEDJKDBP_72); gnlProkkaEEDJKDBP_78 (original name was: gnl|Prokka|EEDJKDBP_78); gnlProkkaEEDJKDBP_79 (original name was: gnl|Prokka|EEDJKDBP_79); gnlProkkaEEDJKDBP_80 (original name was: gnl|Prokka|EEDJKDBP_80); gnlProkkaEEDJKDBP_81 (original name was: gnl|Prokka|EEDJKDBP_81); gnlProkkaEEDJKDBP_82 (original name was: gnl|Prokka|EEDJKDBP_82); gnlProkkaEEDJKDBP_83 (original name was: gnl|Prokka|EEDJKDBP_83); gnlProkkaEEDJKDBP_84 (original name was: gnl|Prokka|EEDJKDBP_84); gnlProkkaEEDJKDBP_85 (original name was: gnl|Prokka|EEDJKDBP_85); gnlProkkaEEDJKDBP_86 (original name was: gnl|Prokka|EEDJKDBP_86); gnlProkkaEEDJKDBP_87 (original name was: gnl|Prokka|EEDJKDBP_87); gnlProkkaEEDJKDBP_88 (original name was: gnl|Prokka|EEDJKDBP_88); gnlProkkaEEDJKDBP_89 (original name was: gnl|Prokka|EEDJKDBP_89); gnlProkkaEEDJKDBP_90 (original name was: gnl|Prokka|EEDJKDBP_90); gnlProkkaEEDJKDBP_91 (original name was: gnl|Prokka|EEDJKDBP_91); gnlProkkaEEDJKDBP_92 (original name was: gnl|Prokka|EEDJKDBP_92); gnlProkkaEEDJKDBP_93 (original name was: gnl|Prokka|EEDJKDBP_93); gnlProkkaEEDJKDBP_94 (original name was: gnl|Prokka|EEDJKDBP_94); gnlProkkaEEDJKDBP_95 (original name was: gnl|Prokka|EEDJKDBP_95); gnlProkkaEEDJKDBP_102 (original name was: gnl|Prokka|EEDJKDBP_102); gnlProkkaEEDJKDBP_103 (original name was: gnl|Prokka|EEDJKDBP_103); gnlProkkaEEDJKDBP_104 (original name was: gnl|Prokka|EEDJKDBP_104); gnlProkkaEEDJKDBP_105 (original name was: gnl|Prokka|EEDJKDBP_105); gnlProkkaEEDJKDBP_106 (original name was: gnl|Prokka|EEDJKDBP_106); gnlProkkaEEDJKDBP_107 (original name was: gnl|Prokka|EEDJKDBP_107); gnlProkkaEEDJKDBP_108 (original name was: gnl|Prokka|EEDJKDBP_108)

Compact view

gnlProkkaEEDJKDBP_11 - Region 1 - RiPP-like

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Location: 2,201 - 12,476 nt. (total: 10,276 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaEEDJKDBP_28 - Region 1 - terpene

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Location: 57,180 - 78,061 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEEDJKDBP_28 - Region 2 - cyclic-lactone-autoinducer

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Location: 336,631 - 357,336 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEEDJKDBP_28 - Region 3 - RiPP-like

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Location: 822,756 - 834,906 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaEEDJKDBP_28 - Region 4 - T3PKS

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Location: 1,838,656 - 1,879,825 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.