GCA_023703155.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDHGMEAMM_35 (original name was: gnl|Prokka|DHGMEAMM_35)

Region	Type	From	To	Most similar known cluster		Similarity
Region 20.1	RiPP-like	4,287	14,562	plantaricyclin	RiPP	100%

gnlProkkaDHGMEAMM_49 (original name was: gnl|Prokka|DHGMEAMM_49)

Region	Type	From	To
Region 26.1	RiPP-like	103,885	116,035
Region 26.2	cyclic-lactone-autoinducer	581,337	602,042
Region 26.3	terpene	860,614	881,495
Region 26.4	T3PKS	2,197,893	2,239,062

No secondary metabolite regions were found in these records:: gnlProkkaDHGMEAMM_1 (original name was: gnl|Prokka|DHGMEAMM_1); gnlProkkaDHGMEAMM_2 (original name was: gnl|Prokka|DHGMEAMM_2); gnlProkkaDHGMEAMM_3 (original name was: gnl|Prokka|DHGMEAMM_3); gnlProkkaDHGMEAMM_4 (original name was: gnl|Prokka|DHGMEAMM_4); gnlProkkaDHGMEAMM_5 (original name was: gnl|Prokka|DHGMEAMM_5); gnlProkkaDHGMEAMM_6 (original name was: gnl|Prokka|DHGMEAMM_6); gnlProkkaDHGMEAMM_7 (original name was: gnl|Prokka|DHGMEAMM_7); gnlProkkaDHGMEAMM_15 (original name was: gnl|Prokka|DHGMEAMM_15); gnlProkkaDHGMEAMM_16 (original name was: gnl|Prokka|DHGMEAMM_16); gnlProkkaDHGMEAMM_17 (original name was: gnl|Prokka|DHGMEAMM_17); gnlProkkaDHGMEAMM_18 (original name was: gnl|Prokka|DHGMEAMM_18); gnlProkkaDHGMEAMM_19 (original name was: gnl|Prokka|DHGMEAMM_19); gnlProkkaDHGMEAMM_20 (original name was: gnl|Prokka|DHGMEAMM_20); gnlProkkaDHGMEAMM_21 (original name was: gnl|Prokka|DHGMEAMM_21); gnlProkkaDHGMEAMM_22 (original name was: gnl|Prokka|DHGMEAMM_22); gnlProkkaDHGMEAMM_23 (original name was: gnl|Prokka|DHGMEAMM_23); gnlProkkaDHGMEAMM_24 (original name was: gnl|Prokka|DHGMEAMM_24); gnlProkkaDHGMEAMM_25 (original name was: gnl|Prokka|DHGMEAMM_25); gnlProkkaDHGMEAMM_27 (original name was: gnl|Prokka|DHGMEAMM_27); gnlProkkaDHGMEAMM_36 (original name was: gnl|Prokka|DHGMEAMM_36); gnlProkkaDHGMEAMM_38 (original name was: gnl|Prokka|DHGMEAMM_38); gnlProkkaDHGMEAMM_43 (original name was: gnl|Prokka|DHGMEAMM_43); gnlProkkaDHGMEAMM_44 (original name was: gnl|Prokka|DHGMEAMM_44); gnlProkkaDHGMEAMM_45 (original name was: gnl|Prokka|DHGMEAMM_45); gnlProkkaDHGMEAMM_53 (original name was: gnl|Prokka|DHGMEAMM_53); gnlProkkaDHGMEAMM_54 (original name was: gnl|Prokka|DHGMEAMM_54); gnlProkkaDHGMEAMM_55 (original name was: gnl|Prokka|DHGMEAMM_55); gnlProkkaDHGMEAMM_56 (original name was: gnl|Prokka|DHGMEAMM_56); gnlProkkaDHGMEAMM_57 (original name was: gnl|Prokka|DHGMEAMM_57); gnlProkkaDHGMEAMM_58 (original name was: gnl|Prokka|DHGMEAMM_58); gnlProkkaDHGMEAMM_60 (original name was: gnl|Prokka|DHGMEAMM_60); gnlProkkaDHGMEAMM_66 (original name was: gnl|Prokka|DHGMEAMM_66); gnlProkkaDHGMEAMM_67 (original name was: gnl|Prokka|DHGMEAMM_67); gnlProkkaDHGMEAMM_68 (original name was: gnl|Prokka|DHGMEAMM_68); gnlProkkaDHGMEAMM_69 (original name was: gnl|Prokka|DHGMEAMM_69); gnlProkkaDHGMEAMM_70 (original name was: gnl|Prokka|DHGMEAMM_70); gnlProkkaDHGMEAMM_71 (original name was: gnl|Prokka|DHGMEAMM_71); gnlProkkaDHGMEAMM_75 (original name was: gnl|Prokka|DHGMEAMM_75); gnlProkkaDHGMEAMM_76 (original name was: gnl|Prokka|DHGMEAMM_76); gnlProkkaDHGMEAMM_78 (original name was: gnl|Prokka|DHGMEAMM_78); gnlProkkaDHGMEAMM_79 (original name was: gnl|Prokka|DHGMEAMM_79); gnlProkkaDHGMEAMM_80 (original name was: gnl|Prokka|DHGMEAMM_80); gnlProkkaDHGMEAMM_81 (original name was: gnl|Prokka|DHGMEAMM_81); gnlProkkaDHGMEAMM_82 (original name was: gnl|Prokka|DHGMEAMM_82); gnlProkkaDHGMEAMM_88 (original name was: gnl|Prokka|DHGMEAMM_88); gnlProkkaDHGMEAMM_89 (original name was: gnl|Prokka|DHGMEAMM_89); gnlProkkaDHGMEAMM_90 (original name was: gnl|Prokka|DHGMEAMM_90); gnlProkkaDHGMEAMM_91 (original name was: gnl|Prokka|DHGMEAMM_91); gnlProkkaDHGMEAMM_92 (original name was: gnl|Prokka|DHGMEAMM_92); gnlProkkaDHGMEAMM_93 (original name was: gnl|Prokka|DHGMEAMM_93); gnlProkkaDHGMEAMM_94 (original name was: gnl|Prokka|DHGMEAMM_94); gnlProkkaDHGMEAMM_95 (original name was: gnl|Prokka|DHGMEAMM_95); gnlProkkaDHGMEAMM_96 (original name was: gnl|Prokka|DHGMEAMM_96); gnlProkkaDHGMEAMM_100 (original name was: gnl|Prokka|DHGMEAMM_100); gnlProkkaDHGMEAMM_101 (original name was: gnl|Prokka|DHGMEAMM_101); gnlProkkaDHGMEAMM_102 (original name was: gnl|Prokka|DHGMEAMM_102); gnlProkkaDHGMEAMM_103 (original name was: gnl|Prokka|DHGMEAMM_103)

Compact view

gnlProkkaDHGMEAMM_35 - Region 1 - RiPP-like

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Location: 4,287 - 14,562 nt. (total: 10,276 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaDHGMEAMM_49 - Region 1 - RiPP-like

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Location: 103,885 - 116,035 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDHGMEAMM_49 - Region 2 - cyclic-lactone-autoinducer

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Location: 581,337 - 602,042 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDHGMEAMM_49 - Region 3 - terpene

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Location: 860,614 - 881,495 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDHGMEAMM_49 - Region 4 - T3PKS

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Location: 2,197,893 - 2,239,062 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.