GCA_023703225.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

gnlProkkaDLIAIFAD_11 (original name was: gnl|Prokka|DLIAIFAD_11)

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	1	8,233	plantaricyclin	RiPP	100%

gnlProkkaDLIAIFAD_34 (original name was: gnl|Prokka|DLIAIFAD_34)

Region	Type	From	To
Region 13.1	T3PKS	637,346	678,515
Region 13.2	terpene	2,002,633	2,023,514
Region 13.3	cyclic-lactone-autoinducer	2,269,066	2,289,771
Region 13.4	RiPP-like	2,768,591	2,780,741

No secondary metabolite regions were found in these records:: gnlProkkaDLIAIFAD_1 (original name was: gnl|Prokka|DLIAIFAD_1); gnlProkkaDLIAIFAD_12 (original name was: gnl|Prokka|DLIAIFAD_12); gnlProkkaDLIAIFAD_13 (original name was: gnl|Prokka|DLIAIFAD_13); gnlProkkaDLIAIFAD_15 (original name was: gnl|Prokka|DLIAIFAD_15); gnlProkkaDLIAIFAD_16 (original name was: gnl|Prokka|DLIAIFAD_16); gnlProkkaDLIAIFAD_17 (original name was: gnl|Prokka|DLIAIFAD_17); gnlProkkaDLIAIFAD_18 (original name was: gnl|Prokka|DLIAIFAD_18); gnlProkkaDLIAIFAD_23 (original name was: gnl|Prokka|DLIAIFAD_23); gnlProkkaDLIAIFAD_31 (original name was: gnl|Prokka|DLIAIFAD_31); gnlProkkaDLIAIFAD_32 (original name was: gnl|Prokka|DLIAIFAD_32); gnlProkkaDLIAIFAD_33 (original name was: gnl|Prokka|DLIAIFAD_33); gnlProkkaDLIAIFAD_35 (original name was: gnl|Prokka|DLIAIFAD_35); gnlProkkaDLIAIFAD_36 (original name was: gnl|Prokka|DLIAIFAD_36); gnlProkkaDLIAIFAD_43 (original name was: gnl|Prokka|DLIAIFAD_43); gnlProkkaDLIAIFAD_44 (original name was: gnl|Prokka|DLIAIFAD_44); gnlProkkaDLIAIFAD_45 (original name was: gnl|Prokka|DLIAIFAD_45); gnlProkkaDLIAIFAD_46 (original name was: gnl|Prokka|DLIAIFAD_46); gnlProkkaDLIAIFAD_47 (original name was: gnl|Prokka|DLIAIFAD_47); gnlProkkaDLIAIFAD_55 (original name was: gnl|Prokka|DLIAIFAD_55); gnlProkkaDLIAIFAD_56 (original name was: gnl|Prokka|DLIAIFAD_56); gnlProkkaDLIAIFAD_57 (original name was: gnl|Prokka|DLIAIFAD_57); gnlProkkaDLIAIFAD_58 (original name was: gnl|Prokka|DLIAIFAD_58); gnlProkkaDLIAIFAD_59 (original name was: gnl|Prokka|DLIAIFAD_59); gnlProkkaDLIAIFAD_60 (original name was: gnl|Prokka|DLIAIFAD_60); gnlProkkaDLIAIFAD_61 (original name was: gnl|Prokka|DLIAIFAD_61); gnlProkkaDLIAIFAD_63 (original name was: gnl|Prokka|DLIAIFAD_63); gnlProkkaDLIAIFAD_64 (original name was: gnl|Prokka|DLIAIFAD_64); gnlProkkaDLIAIFAD_65 (original name was: gnl|Prokka|DLIAIFAD_65); gnlProkkaDLIAIFAD_66 (original name was: gnl|Prokka|DLIAIFAD_66); gnlProkkaDLIAIFAD_68 (original name was: gnl|Prokka|DLIAIFAD_68); gnlProkkaDLIAIFAD_69 (original name was: gnl|Prokka|DLIAIFAD_69); gnlProkkaDLIAIFAD_72 (original name was: gnl|Prokka|DLIAIFAD_72); gnlProkkaDLIAIFAD_73 (original name was: gnl|Prokka|DLIAIFAD_73); gnlProkkaDLIAIFAD_74 (original name was: gnl|Prokka|DLIAIFAD_74); gnlProkkaDLIAIFAD_75 (original name was: gnl|Prokka|DLIAIFAD_75); gnlProkkaDLIAIFAD_76 (original name was: gnl|Prokka|DLIAIFAD_76); gnlProkkaDLIAIFAD_77 (original name was: gnl|Prokka|DLIAIFAD_77); gnlProkkaDLIAIFAD_79 (original name was: gnl|Prokka|DLIAIFAD_79); gnlProkkaDLIAIFAD_80 (original name was: gnl|Prokka|DLIAIFAD_80); gnlProkkaDLIAIFAD_81 (original name was: gnl|Prokka|DLIAIFAD_81); gnlProkkaDLIAIFAD_82 (original name was: gnl|Prokka|DLIAIFAD_82); gnlProkkaDLIAIFAD_85 (original name was: gnl|Prokka|DLIAIFAD_85); gnlProkkaDLIAIFAD_86 (original name was: gnl|Prokka|DLIAIFAD_86); gnlProkkaDLIAIFAD_87 (original name was: gnl|Prokka|DLIAIFAD_87); gnlProkkaDLIAIFAD_88 (original name was: gnl|Prokka|DLIAIFAD_88); gnlProkkaDLIAIFAD_90 (original name was: gnl|Prokka|DLIAIFAD_90); gnlProkkaDLIAIFAD_91 (original name was: gnl|Prokka|DLIAIFAD_91); gnlProkkaDLIAIFAD_92 (original name was: gnl|Prokka|DLIAIFAD_92)

Compact view

gnlProkkaDLIAIFAD_11 - Region 1 - RiPP-like

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Location: 1 - 8,233 nt. (total: 8,233 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

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core biosynthetic genes

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KnownClusterBlast

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

gnlProkkaDLIAIFAD_34 - Region 1 - T3PKS

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Location: 637,346 - 678,515 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

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resistance

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDLIAIFAD_34 - Region 2 - terpene

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Location: 2,002,633 - 2,023,514 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDLIAIFAD_34 - Region 3 - cyclic-lactone-autoinducer

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Location: 2,269,066 - 2,289,771 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Gene overview

KnownClusterBlast

Gene/CDS overview

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Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.

gnlProkkaDLIAIFAD_34 - Region 4 - RiPP-like

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Location: 2,768,591 - 2,780,741 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193 or (YcaO or TIGR03604))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Gene overview

KnownClusterBlast

Gene/CDS overview

Filter:

Automatically zoom to filtered/selected features

Identifier	Product	Length		Function	Sequence		NCBI Blast	Filter details
		NT	AA		NT	AA

Similar known gene clusters from MIBiG 3.1

No matches found.